Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Reverse (-)

28855167 .. 28859853

Gene Structure 4687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g33450.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGGCGGCGACCCCGGCGTACACAAACGACCTCCACACCATTCTCTCGGAGCAACCCCGAGAACTCATGGCCGCCAAAACCCTAGACTCCGACCTCGACATCGCCTTCTCTCTCCAAATGCAGGAAGCCATGACCGCCTCCCTCTCTCACCACCTCCCCTCCTCCTCTTCCCTCCCTCCTCCTCCTCCCCCTCCTCTGCCGCCCATCCACGACGAATACGACGACGTTCTCGACCTCGCCGCCGCGCTGATGCTCGAAGACATCGAGAAATTCGCGCAGGAATACCAAGACCACGAGCGCTCCCTCTTCGAAATCCGCAAGGCGAAAGAAGACCTCGACCGGCGAATTCACGACCAGAATTTCGCCGCCGAGGTCCGCAACGTCCCGGAGGACTACTGGAGCAAGTACGGTGATCACTACGAGAAGCCGTACTGCGGCGACGGCGCTTCGTCGTCGTCGGCGGTGGAGAGTGAGTGTTTGAGGCTGTATTGTAAGGGTTTGGTCGGGGAAGAGGTGGTTAGGGATTCGAAGGTGGTGGTGGCTGGGGCTGGGGTTGCGATTTGTGACCCGAGAGATAATCTGATTTTCGAGGCGAGGAAGAATCTGGAGGCGTTTGATGGTGGTGTGGTGAGGAGCAATGAGGCTGTGGAGCTTCAGGCTCTCATTGAAGGGCTTGAGACTGCTCTCACTCTTGAGTTGAAAACTTTGACTTTTTTCTGTGATGGTTATATGCTTTACCAATATGTTACAGGCAGAGTGGTTCCTGGGAACAGCAAGATTGCCACATTAGTCAATCAACTGGGATGTATACGAAGAAAATTTGAATATTGCAGTCCTTCTCTTGTGGCACGTAGTGACATTAAATTTGCCTTTCAATTTGCAAGAGAGGCTATGGTTTCTCAAATCACCTGGCCTGCAGAAACTAGCAATGGAAAATCTTTGAAGGAGACTTGCGTAATTTGTTTTGAGGACACTAATGTTGGTCAAATGTTTTCGATTGATGGTTGTCTGCACAGGTACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTTAAGTTGCTTAATGGGCAGGTGGCACAGTGCCCTCATGAAGGCTGTAATACTGAGAGAAAGTTTATTGCCCAAATCCCAGGTGTTCTGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

382

Amino Acids

42.52

Weight (kDa)

4.97

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_3	PF13456	180 - 297	1.2e-18	Reverse transcriptase-like
IBR	PF01485	400 - 458	1.1e-10	IBR domain, a half RING-finger domain
IBR	PF01485	474 - 526	1.8e-07	IBR domain, a half RING-finger domain
IBR_1	PF22191	485 - 523	3.6e-06	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1060
Acc36I	ACCTGC	1 cut(s)	1060
AccI	GTMKAC	1 cut(s)	808
AccII	CGCG	2 cut(s)	245, 275
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	5 cut(s)	269, 345, 358, 818, 863
AcuI	CTGAAG	1 cut(s)	638
AdeI	CACNNNGTG	1 cut(s)	854
AfaI	GTAC	4 cut(s)	20, 407, 431, 1019
AfeI	AGCGCT	1 cut(s)	299
AfiI	CCNNNNNNNGG	3 cut(s)	121, 434, 1091
AgsI	TTSAA	5 cut(s)	668, 700, 824, 875, 943
AjnI	CCWGG	3 cut(s)	763, 908, 1129
AluBI	AGCT	1 cut(s)	652
AluI	AGCT	1 cut(s)	652
Alw26I	GTCTC	2 cut(s)	671, 941
AlwNI	CAGNNNCTG	1 cut(s)	1020
Ama87I	CYCGRG	2 cut(s)	57, 568
Aor51HI	AGCGCT	1 cut(s)	299
AoxI	GGCC	2 cut(s)	69, 911
ApoI	RAATTY	5 cut(s)	269, 345, 358, 818, 863
ArsI	GACNNNNNNTTYG	4 cut(s)	344, 376, 848, 880
AspLEI	GCGC	4 cut(s)	247, 277, 300, 446
AspS9I	GGNCC	1 cut(s)	373
AsuC2I	CCSGG	2 cut(s)	14, 386
AsuHPI	GGTGA	4 cut(s)	140, 422, 640, 898
AsuII	TTCGAA	2 cut(s)	309, 527
AvaI	CYCGRG	2 cut(s)	57, 568
AvaII	GGWCC	1 cut(s)	373
BaeGI	GKGCMC	1 cut(s)	1085
BauI	CACGAG	1 cut(s)	293
BbsI	GAAGAC	2 cut(s)	264, 336
BccI	CCATC	4 cut(s)	212, 611, 716, 995
BceAI	ACGGC	2 cut(s)	412, 457
BciT130I	CCWGG	3 cut(s)	765, 910, 1131
BclI	TGATCA	1 cut(s)	412
BcnI	CCSGG	2 cut(s)	14, 386
BcoDI	GTCTC	2 cut(s)	671, 941
BfaI	CTAG	2 cut(s)	83, 924
BfmI	CTRYAG	1 cut(s)	915
BfoI	RGCGCY	2 cut(s)	301, 447
BfuAI	ACCTGC	1 cut(s)	1060
BisI	GCNGC	7 cut(s)	6, 72, 200, 240, 243, 366, 436
BlsI	GCNGC	7 cut(s)	7, 73, 201, 241, 244, 367, 437
Bme1390I	CCNGG	5 cut(s)	14, 386, 765, 910, 1131
Bme18I	GGWCC	1 cut(s)	373
BmeT110I	CYCGRG	2 cut(s)	57, 568
BmgT120I	GGNCC	1 cut(s)	373
BmiI	GGNNCC	1 cut(s)	762
BmrFI	CCNGG	5 cut(s)	14, 386, 765, 910, 1131
BmrI	ACTGGG	1 cut(s)	809
BmsI	GCATC	1 cut(s)	240
BmuI	ACTGGG	1 cut(s)	809
BpiI	GAAGAC	2 cut(s)	264, 336
BpmI	CTGGAG	2 cut(s)	418, 626
Bpu14I	TTCGAA	2 cut(s)	309, 527
BpuEI	CTTGAG	2 cut(s)	695, 713
BpuMI	CCSGG	2 cut(s)	14, 386
BsaAI	YACGTR	1 cut(s)	851
BsaJI	CCNNGG	4 cut(s)	12, 369, 764, 1129
BsaXI	ACNNNNNCTCC	6 cut(s)	143, 173, 284, 314, 458, 488
Bsc4I	CCNNNNNNNGG	3 cut(s)	121, 434, 1091
Bse118I	RCCGGY	1 cut(s)	339
Bse1I	ACTGG	2 cut(s)	401, 804
Bse3DI	GCAATG	2 cut(s)	643, 934
BseBI	CCWGG	3 cut(s)	765, 910, 1131
BseDI	CCNNGG	4 cut(s)	12, 369, 764, 1129
BseGI	GGATG	2 cut(s)	204, 809
BseLI	CCNNNNNNNGG	3 cut(s)	121, 434, 1091
BseMI	GCAATG	2 cut(s)	643, 934
BseMII	CTCAG	1 cut(s)	1095
BseNI	ACTGG	2 cut(s)	401, 804
BseRI	GAGGAG	7 cut(s)	151, 154, 168, 171, 174, 183, 646
BseSI	GKGCMC	1 cut(s)	1085
BseYI	CCCAGC	2 cut(s)	542, 548
BsgI	GTGCAG	1 cut(s)	995
Bsh1236I	CGCG	2 cut(s)	245, 275
Bsh1285I	CGRYCG	1 cut(s)	340
BshFI	GGCC	2 cut(s)	71, 913
BsiEI	CGRYCG	1 cut(s)	340
BsiHKCI	CYCGRG	2 cut(s)	57, 568
BsiSI	CCGG	3 cut(s)	14, 340, 386
BslFI	GGGAC	1 cut(s)	368
BslI	CCNNNNNNNGG	3 cut(s)	121, 434, 1091
BsmAI	GTCTC	2 cut(s)	671, 941
BsmFI	GGGAC	1 cut(s)	368
BsnI	GGCC	2 cut(s)	71, 913
BsoBI	CYCGRG	2 cut(s)	57, 568
Bsp119I	TTCGAA	2 cut(s)	309, 527
Bsp1286I	GDGCHC	1 cut(s)	1085
Bsp143I	GATC	1 cut(s)	412
BspANI	GGCC	2 cut(s)	71, 913
BspCNI	CTCAG	1 cut(s)	1096
BspFNI	CGCG	2 cut(s)	245, 275
BspHI	TCATGA	1 cut(s)	1087
BspLI	GGNNCC	1 cut(s)	762
BspMAI	CTGCAG	1 cut(s)	919
BspMI	ACCTGC	1 cut(s)	1060
BspT104I	TTCGAA	2 cut(s)	309, 527
BsrDI	GCAATG	2 cut(s)	643, 934
BsrFI	RCCGGY	1 cut(s)	339
BsrI	ACTGG	2 cut(s)	401, 804
BssAI	RCCGGY	1 cut(s)	339
BssECI	CCNNGG	4 cut(s)	12, 369, 764, 1129
BssMI	GATC	1 cut(s)	412
BssNAI	GTATAC	1 cut(s)	809
BssSI	CACGAG	1 cut(s)	293
Bst1107I	GTATAC	1 cut(s)	809
Bst2BI	CACGAG	1 cut(s)	293
Bst2UI	CCWGG	3 cut(s)	765, 910, 1131
Bst4CI	ACNGT	2 cut(s)	410, 1080
Bst6I	CTCTTC	3 cut(s)	172, 311, 504
BstBAI	YACGTR	1 cut(s)	851
BstBI	TTCGAA	2 cut(s)	309, 527
BstC8I	GCNNGC	1 cut(s)	915
BstDEI	CTNAG	1 cut(s)	1104
BstENI	CCTNNNNNAGG	1 cut(s)	1089
BstF5I	GGATG	2 cut(s)	204, 809
BstFNI	CGCG	2 cut(s)	245, 275
BstH2I	RGCGCY	2 cut(s)	301, 447
BstHHI	GCGC	4 cut(s)	247, 277, 300, 446
BstKTI	GATC	1 cut(s)	415
BstMAI	GTCTC	2 cut(s)	671, 941
BstMBI	GATC	1 cut(s)	412
BstMCI	CGRYCG	1 cut(s)	340
BstMWI	GCNNNNNNNGC	6 cut(s)	14, 134, 441, 554, 887, 1066
BstNI	CCWGG	3 cut(s)	765, 910, 1131
BstNSI	RCATGY	1 cut(s)	1046
BstSCI	CCNGG	5 cut(s)	12, 384, 763, 908, 1129
BstSFI	CTRYAG	1 cut(s)	915
BstSLI	GKGCMC	1 cut(s)	1085
BstUI	CGCG	2 cut(s)	245, 275
BstV2I	GAAGAC	2 cut(s)	264, 336
BstZ17I	GTATAC	1 cut(s)	809
BsuRI	GGCC	2 cut(s)	71, 913
BtgZI	GCGATG	1 cut(s)	85
BtsCI	GGATG	2 cut(s)	204, 809
BtsIMutI	CAGTG	1 cut(s)	1085
BveI	ACCTGC	1 cut(s)	1060
Cac8I	GCNNGC	1 cut(s)	915
CaiI	CAGNNNCTG	1 cut(s)	1020
CciI	TCATGA	1 cut(s)	1087
CfoI	GCGC	4 cut(s)	247, 277, 300, 446
Cfr10I	RCCGGY	1 cut(s)	339
Cfr13I	GGNCC	1 cut(s)	373
Csp6I	GTAC	4 cut(s)	19, 406, 430, 1018
CviAII	CATG	4 cut(s)	67, 130, 1043, 1088
CviQI	GTAC	4 cut(s)	19, 406, 430, 1018
DdeI	CTNAG	1 cut(s)	1104
DpnI	GATC	1 cut(s)	414
DpnII	GATC	1 cut(s)	412
DraIII	CACNNNGTG	1 cut(s)	854
EaeI	YGGCCR	1 cut(s)	69
Eam1104I	CTCTTC	3 cut(s)	172, 311, 504
EarI	CTCTTC	3 cut(s)	172, 311, 504
Eco47I	GGWCC	1 cut(s)	373
Eco47III	AGCGCT	1 cut(s)	299
Eco57I	CTGAAG	1 cut(s)	638
Eco88I	CYCGRG	2 cut(s)	57, 568
EcoNI	CCTNNNNNAGG	1 cut(s)	1089
EcoRI	GAATTC	1 cut(s)	345
EcoRII	CCWGG	3 cut(s)	763, 908, 1129
FaeI	CATG	4 cut(s)	70, 133, 1046, 1091
FaqI	GGGAC	1 cut(s)	368
FatI	CATG	4 cut(s)	66, 129, 1042, 1087
FbaI	TGATCA	1 cut(s)	412
FblI	GTMKAC	1 cut(s)	808
Fnu4HI	GCNGC	7 cut(s)	6, 72, 200, 240, 243, 366, 436
FokI	GGATG	2 cut(s)	191, 816
Fsp4HI	GCNGC	7 cut(s)	6, 72, 200, 240, 243, 366, 436
FspBI	CTAG	2 cut(s)	83, 924
GlaI	GCGC	4 cut(s)	246, 276, 299, 445
GluI	GCNGC	7 cut(s)	6, 72, 200, 240, 243, 366, 436
GsaI	CCCAGC	2 cut(s)	546, 552
GsuI	CTGGAG	2 cut(s)	418, 626
HaeII	RGCGCY	2 cut(s)	301, 447
HaeIII	GGCC	2 cut(s)	71, 913
HapII	CCGG	3 cut(s)	14, 340, 386
HhaI	GCGC	4 cut(s)	247, 277, 300, 446
Hin1II	CATG	4 cut(s)	70, 133, 1046, 1091
Hin6I	GCGC	4 cut(s)	245, 275, 298, 444
HinP1I	GCGC	4 cut(s)	245, 275, 298, 444
HinfI	GANTC	3 cut(s)	86, 524, 601
HpaII	CCGG	3 cut(s)	14, 340, 386
HphI	GGTGA	4 cut(s)	140, 422, 640, 898
Hpy166II	GTNNAC	2 cut(s)	21, 809
Hpy188I	TCNGA	3 cut(s)	49, 91, 582
Hpy188III	TCNNGA	6 cut(s)	230, 265, 350, 605, 692, 1088
Hpy8I	GTNNAC	2 cut(s)	21, 809
Hpy99I	CGWCG	7 cut(s)	215, 224, 227, 443, 454, 457, 460
HpyAV	CCTTC	6 cut(s)	115, 523, 662, 846, 937, 1085
HpyCH4III	ACNGT	2 cut(s)	410, 1080
HpyCH4IV	ACGT	3 cut(s)	225, 381, 850
HpyCH4V	TGCA	6 cut(s)	121, 831, 881, 917, 1012, 1141
HpyF10VI	GCNNNNNNNGC	6 cut(s)	14, 134, 441, 554, 887, 1066
HpyF3I	CTNAG	1 cut(s)	1104
HpySE526I	ACGT	3 cut(s)	225, 381, 850
Hsp92II	CATG	4 cut(s)	70, 133, 1046, 1091
HspAI	GCGC	4 cut(s)	245, 275, 298, 444
Ksp22I	TGATCA	1 cut(s)	412
Kzo9I	GATC	1 cut(s)	412
LmnI	GCTCC	5 cut(s)	49, 305, 399, 633, 649
LweI	GCATC	1 cut(s)	240
MaeI	CTAG	2 cut(s)	83, 924
MaeII	ACGT	3 cut(s)	225, 381, 850
MaeIII	GTNAC	3 cut(s)	563, 745, 854
MalI	GATC	1 cut(s)	414
MboI	GATC	1 cut(s)	412
MboII	GAAGA	7 cut(s)	159, 269, 298, 341, 521, 610, 825
MhlI	GDGCHC	1 cut(s)	1085
MluCI	AATT	7 cut(s)	269, 345, 358, 818, 863, 875, 957
MlyI	GAGTC	1 cut(s)	80
MmeI	TCCRAC	1 cut(s)	114
MseI	TTAA	3 cut(s)	861, 1053, 1062
MspI	CCGG	3 cut(s)	14, 340, 386
MspR9I	CCNGG	5 cut(s)	14, 386, 765, 910, 1131
MvaI	CCWGG	3 cut(s)	765, 910, 1131
MvnI	CGCG	2 cut(s)	245, 275
MwoI	GCNNNNNNNGC	6 cut(s)	14, 134, 441, 554, 887, 1066
NciI	CCSGG	2 cut(s)	14, 386
NdeII	GATC	1 cut(s)	412
NlaIII	CATG	4 cut(s)	70, 133, 1046, 1091
NlaIV	GGNNCC	1 cut(s)	762
NmeAIII	GCCGAG	1 cut(s)	394
NmuCI	GTSAC	2 cut(s)	563, 854
NspI	RCATGY	1 cut(s)	1046
NspV	TTCGAA	2 cut(s)	309, 527
PagI	TCATGA	1 cut(s)	1087
PaqCI	CACCTGC	1 cut(s)	1060
PcsI	WCGNNNNNNNCGW	4 cut(s)	216, 219, 228, 261
PfeI	GAWTC	2 cut(s)	524, 601
PfoI	TCCNGGA	1 cut(s)	384
PkrI	GCNGC	7 cut(s)	7, 73, 201, 241, 244, 367, 437
PleI	GAGTC	1 cut(s)	80
PpsI	GAGTC	1 cut(s)	80
Ppu21I	YACGTR	1 cut(s)	851
Psp6I	CCWGG	3 cut(s)	763, 908, 1129
PspFI	CCCAGC	2 cut(s)	542, 548
PspGI	CCWGG	3 cut(s)	763, 908, 1129
PspN4I	GGNNCC	1 cut(s)	762
PspPI	GGNCC	1 cut(s)	373
PstI	CTGCAG	1 cut(s)	919
PstNI	CAGNNNCTG	1 cut(s)	1020
RsaI	GTAC	4 cut(s)	20, 407, 431, 1019
RsaNI	GTAC	4 cut(s)	19, 406, 430, 1018
SaqAI	TTAA	3 cut(s)	861, 1053, 1062
SatI	GCNGC	7 cut(s)	6, 72, 200, 240, 243, 366, 436
Sau3AI	GATC	1 cut(s)	412
Sau96I	GGNCC	1 cut(s)	373
SchI	GAGTC	1 cut(s)	80
ScrFI	CCNGG	5 cut(s)	14, 386, 765, 910, 1131
SduI	GDGCHC	1 cut(s)	1085
SfaNI	GCATC	1 cut(s)	240
SfcI	CTRYAG	1 cut(s)	915
SfuI	TTCGAA	2 cut(s)	309, 527
SinI	GGWCC	1 cut(s)	373
SmlI	CTYRAG	2 cut(s)	674, 692
SmoI	CTYRAG	2 cut(s)	674, 692
Sse9I	AATT	7 cut(s)	269, 345, 358, 818, 863, 875, 957
SspI	AATATT	1 cut(s)	827
SspMI	CTAG	2 cut(s)	83, 924
StyD4I	CCNGG	5 cut(s)	12, 384, 763, 908, 1129
TaaI	ACNGT	2 cut(s)	410, 1080
TaiI	ACGT	3 cut(s)	228, 384, 853
TaqI	TCGA	9 cut(s)	96, 231, 255, 264, 309, 336, 527, 588, 995
TasI	AATT	7 cut(s)	269, 345, 358, 818, 863, 875, 957
TauI	GCSGC	7 cut(s)	8, 74, 202, 242, 245, 368, 438
TfiI	GAWTC	2 cut(s)	524, 601
Tru1I	TTAA	3 cut(s)	861, 1053, 1062
Tru9I	TTAA	3 cut(s)	861, 1053, 1062
TscAI	CASTG	1 cut(s)	1085
TseFI	GTSAC	2 cut(s)	563, 854
Tsp45I	GTSAC	2 cut(s)	563, 854
TspDTI	ATGAA	2 cut(s)	1049, 1104
TspRI	CASTG	1 cut(s)	1085
VpaK11BI	GGWCC	1 cut(s)	373
XagI	CCTNNNNNAGG	1 cut(s)	1089
XapI	RAATTY	5 cut(s)	269, 345, 358, 818, 863
XceI	RCATGY	1 cut(s)	1046
XmiI	GTMKAC	1 cut(s)	808
XspI	CTAG	2 cut(s)	83, 924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.