Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000727.1

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Forward (+)

23119 .. 25488

Gene Structure 2370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000727.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

atggatgatcatagagacgcagaagacctccaagccattctggcggagcagcgcagagagctcttggcagccaaaaccctagactccgacctcgacatggcattcaatcttcaaatgaaggaagccctcacggcctctctggctctccaaccctcctccagtactcagcagtctccgcctccgtctccgccgtacgagcccaaggacgacctcttggacctcgccgcagcgttcatgctcgaggacgtggagaggtttcctcaggagtacgaggaccacgaacgcagcgttttggaggtgaagaaactgaagacggatctcgaccgtcggattcacgaccagaagttcgctatcgacgtccgtggcttgccggaggactactggagcgagtacggagacgaatatgaaaggccgtactgtacggatgggtcgtcgtcttcaaaagatgggttgcagactgagtgtttgagattgtattgcaagggtttgattagtgaagaagtggtcaagagtgtgaaggtggcggtgggtgggattggggttgcgatttgtgacccgagagataatctgattttcgaggccaagaagaatctagaagtgttggttgatggcgagattatgagcaatgaggctgcggagcttgaggctctctgtgaaggacttaataaagctctcacactggacttgaaaaatatgatcacctttttcattgatgacaacaagctttaccaatatgttacagacgaagtgattcctgggaacagcaagattgcaacattagtcaatcaagttgctcttttacagagaaaatttgaatcttgcagtccttctcttgtggcacctagtgaaattaagtttgtgtttaaatttgcaagagatgctatagtttctcagatcagttggtgtgtaaaaactcacaatggcaagagtttcaaggagacttgtgcgatttgttttgaagaaactgatgttgctcgcatgttttcaatcgatggttgtctgcacaggtattgcatttcttgtgtgaaaaaacatgtggaagtaaagttgcttagtgggatggtggcacagtgtccacatgaagcctgtaattctgaggtgaatattgatagctatgaacaattcttggcacctaatcttgttgcggttatgagccaacgaattaaggaatcttctattcctgttacagagagagtgtactgcccttaccccaagtgttctgccttaatgtccaaaatggaggtctttgaatataccaaaacttcttacgttggtgctgaagaatctgcagccaggaaatgcatgaaatgtcgttactatttttgttttgattgcatggttccttggcattacaaaatgagctgcgaagagtacaaacaatcacatccatttccccccaaagaagatcaactgctgaattcattggctgaaacaaaacggtggcgcaactgtaagaagtgcaaccacatggttgaacttgcagtaggttgtaaccacatcacttgcaggtgctttactctctctcatcctatttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

511

Amino Acids

58.06

Weight (kDa)

5.22

Isoelectric Point (pI)

55.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1497
AatII	GACGTC	1 cut(s)	360
Acc36I	ACCTGC	1 cut(s)	1497
AccB1I	GGYRCC	2 cut(s)	838, 1129
AciI	CCGC	7 cut(s)	44, 176, 188, 225, 524, 635, 1145
AclWI	GGATC	1 cut(s)	324
AcsI	RAATTY	3 cut(s)	809, 866, 1417
AcuI	CTGAAG	2 cut(s)	329, 1299
AcyI	GRCGYC	1 cut(s)	357
AdeI	CACNNNGTG	1 cut(s)	845
AfaI	GTAC	8 cut(s)	163, 194, 269, 392, 416, 421, 1199, 1373
AfiI	CCNNNNNNNGG	1 cut(s)	97
AflIII	ACRYGT	1 cut(s)	1033
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	2 cut(s)	754, 1292
AluBI	AGCT	6 cut(s)	61, 640, 671, 724, 1113, 1362
AluI	AGCT	6 cut(s)	61, 640, 671, 724, 1113, 1362
Alw21I	GWGCWC	1 cut(s)	63
Alw26I	GTCTC	5 cut(s)	9, 177, 189, 390, 932
AlwI	GGATC	1 cut(s)	324
Ama87I	CYCGRG	2 cut(s)	239, 556
AoxI	GGCC	3 cut(s)	132, 410, 579
ApeKI	GCWGC	7 cut(s)	49, 68, 227, 285, 632, 1289, 1362
ApoI	RAATTY	3 cut(s)	809, 866, 1417
ArsI	GACNNNNNNTTYG	6 cut(s)	329, 361, 448, 480, 1227, 1259
Asp700I	GAANNNNTTC	1 cut(s)	750
AspLEI	GCGC	2 cut(s)	54, 1446
AspS9I	GGNCC	2 cut(s)	217, 274
AsuHPI	GGTGA	3 cut(s)	310, 691, 1111
AvaI	CYCGRG	2 cut(s)	239, 556
AvaII	GGWCC	2 cut(s)	217, 274
AxyI	CCTNAGG	1 cut(s)	261
BanI	GGYRCC	2 cut(s)	838, 1129
BanII	GRGCYC	2 cut(s)	63, 201
BbsI	GAAGAC	3 cut(s)	30, 317, 429
Bbv12I	GWGCWC	1 cut(s)	63
BbvI	GCAGC	7 cut(s)	61, 80, 239, 297, 619, 1301, 1349
BccI	CCATC	5 cut(s)	419, 440, 602, 986, 1054
BceAI	ACGGC	3 cut(s)	147, 175, 397
BciT130I	CCWGG	2 cut(s)	756, 1294
BclI	TGATCA	2 cut(s)	7, 696
BcoDI	GTCTC	5 cut(s)	9, 177, 189, 390, 932
BfaI	CTAG	3 cut(s)	80, 593, 843
BfmI	CTRYAG	2 cut(s)	882, 1287
BfuAI	ACCTGC	1 cut(s)	1497
BglI	GCCNNNNNGGC	3 cut(s)	41, 131, 140
BisI	GCNGC	8 cut(s)	50, 69, 225, 228, 286, 633, 1290, 1363
BlsI	GCNGC	8 cut(s)	51, 70, 226, 229, 287, 634, 1291, 1364
BmcAI	AGTACT	1 cut(s)	163
Bme1390I	CCNGG	2 cut(s)	756, 1294
Bme18I	GGWCC	2 cut(s)	217, 274
BmeT110I	CYCGRG	2 cut(s)	239, 556
BmgBI	CACGTC	1 cut(s)	247
BmgT120I	GGNCC	2 cut(s)	217, 274
BmiI	GGNNCC	3 cut(s)	840, 1131, 1341
BmrFI	CCNGG	2 cut(s)	756, 1294
BmsI	GCATC	1 cut(s)	868
BpiI	GAAGAC	3 cut(s)	30, 317, 429
BplI	GAGNNNNNCTC	2 cut(s)	244, 276
BpmI	CTGGAG	2 cut(s)	142, 403
BpuEI	CTTGAG	1 cut(s)	662
Bsa29I	ATCGAT	1 cut(s)	990
BsaHI	GRCGYC	1 cut(s)	357
BsaJI	CCNNGG	4 cut(s)	201, 361, 755, 1343
Bsc4I	CCNNNNNNNGG	1 cut(s)	97
Bse1I	ACTGG	3 cut(s)	159, 386, 684
Bse21I	CCTNAGG	1 cut(s)	261
Bse3DI	GCAATG	1 cut(s)	631
BseBI	CCWGG	2 cut(s)	756, 1294
BseCI	ATCGAT	1 cut(s)	990
BseDI	CCNNGG	4 cut(s)	201, 361, 755, 1343
BseGI	GGATG	5 cut(s)	10, 430, 1065, 1384, 1525
BseLI	CCNNNNNNNGG	1 cut(s)	97
BseMI	GCAATG	1 cut(s)	631
BseMII	CTCAG	5 cut(s)	179, 275, 450, 905, 1086
BseNI	ACTGG	3 cut(s)	159, 386, 684
BseRI	GAGGAG	1 cut(s)	145
BseXI	GCAGC	7 cut(s)	61, 80, 239, 297, 619, 1301, 1349
BsgI	GTGCAG	1 cut(s)	986
Bsh1285I	CGRYCG	1 cut(s)	325
BshFI	GGCC	3 cut(s)	134, 412, 581
BshNI	GGYRCC	2 cut(s)	838, 1129
BshVI	ATCGAT	1 cut(s)	990
BsiEI	CGRYCG	1 cut(s)	325
BsiHKAI	GWGCWC	1 cut(s)	63
BsiHKCI	CYCGRG	2 cut(s)	239, 556
BsiSI	CCGG	1 cut(s)	371
BsiWI	CGTACG	1 cut(s)	192
BslI	CCNNNNNNNGG	1 cut(s)	97
BsmAI	GTCTC	5 cut(s)	9, 177, 189, 390, 932
BsmBI	CGTCTC	3 cut(s)	9, 189, 390
BsmI	GAATGC	1 cut(s)	101
BsnI	GGCC	3 cut(s)	134, 412, 581
BsoBI	CYCGRG	2 cut(s)	239, 556
Bsp1286I	GDGCHC	2 cut(s)	63, 201
Bsp143I	GATC	5 cut(s)	7, 316, 696, 894, 1405
BspACI	CCGC	7 cut(s)	44, 176, 188, 225, 524, 635, 1145
BspANI	GGCC	3 cut(s)	134, 412, 581
BspCNI	CTCAG	5 cut(s)	178, 274, 451, 904, 1087
BspDI	ATCGAT	1 cut(s)	990
BspLI	GGNNCC	3 cut(s)	840, 1131, 1341
BspMAI	CTGCAG	1 cut(s)	1291
BspMI	ACCTGC	1 cut(s)	1497
BspPI	GGATC	1 cut(s)	324
BspT107I	GGYRCC	2 cut(s)	838, 1129
BsrDI	GCAATG	1 cut(s)	631
BsrI	ACTGG	3 cut(s)	159, 386, 684
BssECI	CCNNGG	4 cut(s)	201, 361, 755, 1343
BssMI	GATC	5 cut(s)	7, 316, 696, 894, 1405
BssNI	GRCGYC	1 cut(s)	357
BssT1I	CCWWGG	2 cut(s)	201, 1343
Bst2UI	CCWGG	2 cut(s)	756, 1294
Bst4CI	ACNGT	5 cut(s)	326, 419, 1071, 1440, 1451
Bst6I	CTCTTC	1 cut(s)	1362
BstACI	GRCGYC	1 cut(s)	357
BstAPI	GCANNNNNTGC	1 cut(s)	878
BstC8I	GCNNGC	2 cut(s)	368, 976
BstDEI	CTNAG	6 cut(s)	165, 261, 459, 891, 1052, 1095
BstDSI	CCRYGG	1 cut(s)	361
BstF5I	GGATG	5 cut(s)	10, 430, 1065, 1384, 1525
BstHHI	GCGC	2 cut(s)	54, 1446
BstKTI	GATC	5 cut(s)	10, 319, 699, 897, 1408
BstMAI	GTCTC	5 cut(s)	9, 177, 189, 390, 932
BstMBI	GATC	5 cut(s)	7, 316, 696, 894, 1405
BstMCI	CGRYCG	1 cut(s)	325
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 58, 131, 140, 175, 196, 878
BstNI	CCWGG	2 cut(s)	756, 1294
BstNSI	RCATGY	2 cut(s)	982, 1037
BstSCI	CCNGG	2 cut(s)	754, 1292
BstSFI	CTRYAG	2 cut(s)	882, 1287
BstV1I	GCAGC	7 cut(s)	61, 80, 239, 297, 619, 1301, 1349
BstV2I	GAAGAC	3 cut(s)	30, 317, 429
BstX2I	RGATCY	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	316
Bsu15I	ATCGAT	1 cut(s)	990
Bsu36I	CCTNAGG	1 cut(s)	261
BsuRI	GGCC	3 cut(s)	134, 412, 581
BsuTUI	ATCGAT	1 cut(s)	990
BtgI	CCRYGG	1 cut(s)	361
BtrI	CACGTC	1 cut(s)	247
BtsCI	GGATG	5 cut(s)	10, 430, 1065, 1384, 1525
BtsIMutI	CAGTG	2 cut(s)	677, 1076
BveI	ACCTGC	1 cut(s)	1497
Cac8I	GCNNGC	2 cut(s)	368, 976
CfoI	GCGC	2 cut(s)	54, 1446
Cfr13I	GGNCC	2 cut(s)	217, 274
ClaI	ATCGAT	1 cut(s)	990
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	8 cut(s)	162, 193, 268, 391, 415, 420, 1198, 1372
CspCI	CAANNNNNGTGG	2 cut(s)	1484, 1519
CviAII	CATG	8 cut(s)	97, 235, 979, 1034, 1079, 1303, 1336, 1468
CviQI	GTAC	8 cut(s)	162, 193, 268, 391, 415, 420, 1198, 1372
DdeI	CTNAG	6 cut(s)	165, 261, 459, 891, 1052, 1095
DpnI	GATC	5 cut(s)	9, 318, 698, 896, 1407
DpnII	GATC	5 cut(s)	7, 316, 696, 894, 1405
DraI	TTTAAA	1 cut(s)	865
DraIII	CACNNNGTG	1 cut(s)	845
Eam1104I	CTCTTC	1 cut(s)	1362
EarI	CTCTTC	1 cut(s)	1362
EciI	GGCGGA	3 cut(s)	59, 165, 177
Ecl136II	GAGCTC	1 cut(s)	61
Eco130I	CCWWGG	2 cut(s)	201, 1343
Eco24I	GRGCYC	2 cut(s)	63, 201
Eco47I	GGWCC	2 cut(s)	217, 274
Eco53kI	GAGCTC	1 cut(s)	61
Eco57I	CTGAAG	2 cut(s)	329, 1299
Eco81I	CCTNAGG	1 cut(s)	261
Eco88I	CYCGRG	2 cut(s)	239, 556
EcoICRI	GAGCTC	1 cut(s)	61
EcoRI	GAATTC	1 cut(s)	1417
EcoRII	CCWGG	2 cut(s)	754, 1292
EcoT14I	CCWWGG	2 cut(s)	201, 1343
EcoT22I	ATGCAT	1 cut(s)	1304
EcoT38I	GRGCYC	2 cut(s)	63, 201
ErhI	CCWWGG	2 cut(s)	201, 1343
Esp3I	CGTCTC	3 cut(s)	9, 189, 390
FaeI	CATG	8 cut(s)	100, 238, 982, 1037, 1082, 1306, 1339, 1471
FalI	AAGNNNNNCTT	2 cut(s)	780, 812
FatI	CATG	8 cut(s)	96, 234, 978, 1033, 1078, 1302, 1335, 1467
FbaI	TGATCA	2 cut(s)	7, 696
Fnu4HI	GCNGC	8 cut(s)	50, 69, 225, 228, 286, 633, 1290, 1363
FokI	GGATG	5 cut(s)	17, 437, 1072, 1371, 1512
FriOI	GRGCYC	2 cut(s)	63, 201
Fsp4HI	GCNGC	8 cut(s)	50, 69, 225, 228, 286, 633, 1290, 1363
FspBI	CTAG	3 cut(s)	80, 593, 843
GlaI	GCGC	2 cut(s)	53, 1445
GluI	GCNGC	8 cut(s)	50, 69, 225, 228, 286, 633, 1290, 1363
GsuI	CTGGAG	2 cut(s)	142, 403
HaeIII	GGCC	3 cut(s)	134, 412, 581
HapII	CCGG	1 cut(s)	371
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	2 cut(s)	54, 1446
Hin1I	GRCGYC	1 cut(s)	357
Hin1II	CATG	8 cut(s)	100, 238, 982, 1037, 1082, 1306, 1339, 1471
Hin6I	GCGC	2 cut(s)	52, 1444
HinP1I	GCGC	2 cut(s)	52, 1444
HindIII	AAGCTT	1 cut(s)	722
HinfI	GANTC	7 cut(s)	83, 331, 589, 751, 815, 1169, 1283
HpaII	CCGG	1 cut(s)	371
HphI	GGTGA	3 cut(s)	310, 691, 1111
Hpy166II	GTNNAC	2 cut(s)	1076, 1198
Hpy188I	TCNGA	5 cut(s)	88, 330, 570, 894, 1096
Hpy188III	TCNNGA	5 cut(s)	263, 320, 335, 508, 593
Hpy8I	GTNNAC	2 cut(s)	1076, 1198
Hpy99I	CGWCG	3 cut(s)	330, 359, 436
HpyAV	CCTTC	4 cut(s)	112, 511, 650, 837
HpyCH4III	ACNGT	5 cut(s)	326, 419, 1071, 1440, 1451
HpyCH4IV	ACGT	3 cut(s)	246, 357, 1269
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 58, 131, 140, 175, 196, 878
HpyF3I	CTNAG	6 cut(s)	165, 261, 459, 891, 1052, 1095
HpySE526I	ACGT	3 cut(s)	246, 357, 1269
Hsp92I	GRCGYC	1 cut(s)	357
Hsp92II	CATG	8 cut(s)	100, 238, 982, 1037, 1082, 1306, 1339, 1471
HspAI	GCGC	2 cut(s)	52, 1444
Ksp22I	TGATCA	2 cut(s)	7, 696
Kzo9I	GATC	5 cut(s)	7, 316, 696, 894, 1405
LmnI	GCTCC	3 cut(s)	46, 384, 637
Lsp1109I	GCAGC	7 cut(s)	61, 80, 239, 297, 619, 1301, 1349
LweI	GCATC	1 cut(s)	868
MaeI	CTAG	3 cut(s)	80, 593, 843
MaeII	ACGT	3 cut(s)	246, 357, 1269
MaeIII	GTNAC	5 cut(s)	551, 736, 1183, 1313, 1490
MalI	GATC	5 cut(s)	9, 318, 698, 896, 1407
MboI	GATC	5 cut(s)	7, 316, 696, 894, 1405
MflI	RGATCY	1 cut(s)	316
MhlI	GDGCHC	2 cut(s)	63, 201
MluCI	AATT	7 cut(s)	809, 849, 866, 1090, 1121, 1161, 1417
MlyI	GAGTC	1 cut(s)	77
MmeI	TCCRAC	3 cut(s)	111, 172, 308
Mph1103I	ATGCAT	1 cut(s)	1304
MroXI	GAANNNNTTC	1 cut(s)	750
MseI	TTAA	5 cut(s)	663, 852, 864, 1164, 1226
MspI	CCGG	1 cut(s)	371
MspR9I	CCNGG	2 cut(s)	756, 1294
Mva1269I	GAATGC	1 cut(s)	101
MvaI	CCWGG	2 cut(s)	756, 1294
MwoI	GCNNNNNNNGC	7 cut(s)	41, 58, 131, 140, 175, 196, 878
NdeII	GATC	5 cut(s)	7, 316, 696, 894, 1405
NlaIII	CATG	8 cut(s)	100, 238, 982, 1037, 1082, 1306, 1339, 1471
NlaIV	GGNNCC	3 cut(s)	840, 1131, 1341
NmuCI	GTSAC	1 cut(s)	551
NsiI	ATGCAT	1 cut(s)	1304
NspI	RCATGY	2 cut(s)	982, 1037
PaeR7I	CTCGAG	1 cut(s)	239
PaqCI	CACCTGC	1 cut(s)	1497
PciI	ACATGT	1 cut(s)	1033
PcsI	WCGNNNNNNNCGW	4 cut(s)	276, 285, 354, 428
PctI	GAATGC	1 cut(s)	101
PdmI	GAANNNNTTC	1 cut(s)	750
PfeI	GAWTC	6 cut(s)	331, 589, 751, 815, 1169, 1283
Pfl23II	CGTACG	1 cut(s)	192
PkrI	GCNGC	8 cut(s)	51, 70, 226, 229, 287, 634, 1291, 1364
PleI	GAGTC	1 cut(s)	77
PpsI	GAGTC	1 cut(s)	77
PscI	ACATGT	1 cut(s)	1033
Psp124BI	GAGCTC	1 cut(s)	63
Psp6I	CCWGG	2 cut(s)	754, 1292
PspGI	CCWGG	2 cut(s)	754, 1292
PspLI	CGTACG	1 cut(s)	192
PspN4I	GGNNCC	3 cut(s)	840, 1131, 1341
PspPI	GGNCC	2 cut(s)	217, 274
PspXI	VCTCGAGB	1 cut(s)	239
PstI	CTGCAG	1 cut(s)	1291
PsuI	RGATCY	1 cut(s)	316
RsaI	GTAC	8 cut(s)	163, 194, 269, 392, 416, 421, 1199, 1373
RsaNI	GTAC	8 cut(s)	162, 193, 268, 391, 415, 420, 1198, 1372
SacI	GAGCTC	1 cut(s)	63
SaqAI	TTAA	5 cut(s)	663, 852, 864, 1164, 1226
SatI	GCNGC	8 cut(s)	50, 69, 225, 228, 286, 633, 1290, 1363
Sau3AI	GATC	5 cut(s)	7, 316, 696, 894, 1405
Sau96I	GGNCC	2 cut(s)	217, 274
ScaI	AGTACT	1 cut(s)	163
SchI	GAGTC	1 cut(s)	77
ScrFI	CCNGG	2 cut(s)	756, 1294
SduI	GDGCHC	2 cut(s)	63, 201
SfaNI	GCATC	1 cut(s)	868
SfcI	CTRYAG	2 cut(s)	882, 1287
Sfr274I	CTCGAG	1 cut(s)	239
SinI	GGWCC	2 cut(s)	217, 274
SlaI	CTCGAG	1 cut(s)	239
SmlI	CTYRAG	2 cut(s)	239, 641
SmoI	CTYRAG	2 cut(s)	239, 641
Sse9I	AATT	7 cut(s)	809, 849, 866, 1090, 1121, 1161, 1417
SsiI	CCGC	7 cut(s)	44, 176, 188, 225, 524, 635, 1145
SspI	AATATT	1 cut(s)	1105
SspMI	CTAG	3 cut(s)	80, 593, 843
SstI	GAGCTC	1 cut(s)	63
StyD4I	CCNGG	2 cut(s)	754, 1292
StyI	CCWWGG	2 cut(s)	201, 1343
TaaI	ACNGT	5 cut(s)	326, 419, 1071, 1440, 1451
TaiI	ACGT	3 cut(s)	249, 360, 1272
TaqI	TCGA	6 cut(s)	93, 240, 321, 354, 576, 990
TasI	AATT	7 cut(s)	809, 849, 866, 1090, 1121, 1161, 1417
TatI	WGTACW	3 cut(s)	161, 1197, 1371
TauI	GCSGC	1 cut(s)	227
TfiI	GAWTC	6 cut(s)	331, 589, 751, 815, 1169, 1283
Tru1I	TTAA	5 cut(s)	663, 852, 864, 1164, 1226
Tru9I	TTAA	5 cut(s)	663, 852, 864, 1164, 1226
TscAI	CASTG	2 cut(s)	684, 1076
TseFI	GTSAC	1 cut(s)	551
TseI	GCWGC	7 cut(s)	49, 68, 227, 285, 632, 1289, 1362
Tsp45I	GTSAC	1 cut(s)	551
TspDTI	ATGAA	8 cut(s)	131, 223, 420, 697, 1095, 1131, 1319, 1410
TspGWI	ACGGA	5 cut(s)	171, 329, 350, 408, 437
TspRI	CASTG	2 cut(s)	684, 1076
VpaK11BI	GGWCC	2 cut(s)	217, 274
XapI	RAATTY	3 cut(s)	809, 866, 1417
XbaI	TCTAGA	1 cut(s)	592
XceI	RCATGY	2 cut(s)	982, 1037
XhoI	CTCGAG	1 cut(s)	239
XmnI	GAANNNNTTC	1 cut(s)	750
XspI	CTAG	3 cut(s)	80, 593, 843
ZraI	GACGTC	1 cut(s)	358
ZrmI	AGTACT	1 cut(s)	163
Zsp2I	ATGCAT	1 cut(s)	1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.