Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Reverse (-)

66065120 .. 66067831

Gene Structure 2712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33728

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGCCTTCAATCTCCAACTGCAGGAAGCCATGGCCGACTCTCTCGCTCTCCAACCACCATCCACTTCTCAACTCAATCTCCACCCTCGGATTCACGACCACAATTTCGTAATCGACCTCACCGACTCGGCGGAGGCCTACTTCACGAACGACGCGTCGTCTTCGTCGAAGGCGGCGGAGGAGGAGAGCGAGTGTTTTAGACTGTATTTCAAGGGGCTTGTAAGCGAGGAGAGGGTCAAGGACATGGATGTCATTGTGGCCGGGGTTGGGGTGGCCGTTTGTGACGCTAGAGATAATCTGATTTTGGAGGCCAAGAAGAATCTGGAGGCGTTTGGTGGTGGCGAGGTTCTGAGCAATGAGGCTGCTGAGCTTGAGGCTCTTATTGAAGGGCTCAGTACAGCTCTCACTCTGGACTTGAGAAATGTCACATTTTACTGTGATGACAGCAAGCTTTACCAATATGTCACATACACAGTGCGTCCTGAAAACTTCAAGATTGCGACATTAGTCACTCAAGTTGCTCTTCTACAAAGAAAATTTGAACATTGCACCCCTTCTTTTGTGGAACCTAGGGACATTAAGTTTGCATTTCAATTTGCAAGAGAGGCTATAGTTTCTCAGATCAACTGGCCAGCTAGCAATGGCAAGAGATTGGATGAGACTTGTGTAATTTGTTTTGAAGAAACAGATGTTGCTAGAATGTTTTCAATTGACAGCTGTCTGCACAGGTATTGCAATTCTTGTATGAAACAGCATGTTGAAGCAAAGTTGGTTAATGGGAGCGTGGTGCAGTGTCCTCATGAAGGCTGTGAGTCTGAAGTGAGTATTGATAGCTGTGAAACATTCTTGGAGCCTAAACTTGTTCAAGTTATGCGCCAACGAATCAAGGAATCTTCTATTCCTGTTACGGAGAAGGTTTACTGTCCAAATCCCAAGTGTTCTGCATTAATGTCAAAAAAAGATGTCTTGAAATATACCAAGACTTATTATGGTTTTGCTGAACAATCTGGAGTCAGGAAATGCATGGAATGTCATTGCTGTTTTTGTATCAATTGCAAAGTTCCATTCGACAATCATACCTGCTACGACTACAAAAAATCAAATCCTTGTGCAGAAGAGCAATTGATGAAGTCACTGGCTAAAAAGAAACACTGGCGCCAGTGTGTGAACTGCAGCCATATGGTTGAACTTGCAGAAGGTTGTTACCACATAACTTGCAGATGTGGATATGAGTTTTGCTATACTTGTGGAGCTGAATGGAAGGACAAGACACCAACATGTTCCTGCCCAATCTGGGATGAGCGCAACATTATAAGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

440

Amino Acids

49.95

Weight (kDa)

5.51

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_3	PF13456	87 - 203	1.4e-17	Reverse transcriptase-like
IBR	PF01485	375 - 427	4.3e-07	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1313
AasI	GACNNNNNNGTC	1 cut(s)	248
Acc36I	ACCTGC	1 cut(s)	1088
AccB1I	GGYRCC	1 cut(s)	1155
AccII	CGCG	1 cut(s)	155
AciI	CCGC	3 cut(s)	131, 173, 176
AcoI	YGGCCR	4 cut(s)	33, 258, 273, 629
AcsI	RAATTY	1 cut(s)	536
AcuI	CTGAAG	1 cut(s)	837
AcyI	GRCGYC	1 cut(s)	1156
AfaI	GTAC	1 cut(s)	397
AfiI	CCNNNNNNNGG	4 cut(s)	22, 267, 803, 1294
AflIII	ACRYGT	2 cut(s)	153, 1277
AhdI	GACNNNNNGTC	1 cut(s)	157
AluBI	AGCT	7 cut(s)	370, 401, 451, 635, 717, 834, 1253
AluI	AGCT	7 cut(s)	370, 401, 451, 635, 717, 834, 1253
Alw26I	GTCTC	1 cut(s)	653
AoxI	GGCC	7 cut(s)	3, 33, 135, 258, 273, 309, 629
ApeKI	GCWGC	2 cut(s)	362, 1173
ApoI	RAATTY	1 cut(s)	536
ArsI	GACNNNNNNTTYG	6 cut(s)	89, 121, 140, 172, 566, 598
AseI	ATTAAT	1 cut(s)	947
Asp700I	GAANNNNTTC	1 cut(s)	703
AspA2I	CCTAGG	1 cut(s)	569
AspLEI	GCGC	3 cut(s)	876, 1158, 1305
AsuC2I	CCSGG	1 cut(s)	262
AsuHPI	GGTGA	1 cut(s)	112
AsuNHI	GCTAGC	1 cut(s)	635
AvrII	CCTAGG	1 cut(s)	569
BalI	TGGCCA	1 cut(s)	631
BanI	GGYRCC	1 cut(s)	1155
BanII	GRGCYC	1 cut(s)	393
BbsI	GAAGAC	1 cut(s)	153
BbvI	GCAGC	2 cut(s)	349, 1185
BccI	CCATC	1 cut(s)	67
BceAI	ACGGC	1 cut(s)	260
BcnI	CCSGG	1 cut(s)	262
BcoDI	GTCTC	1 cut(s)	653
BfaI	CTAG	4 cut(s)	288, 570, 636, 696
BfmI	CTRYAG	3 cut(s)	20, 609, 1171
BfoI	RGCGCY	1 cut(s)	1159
BfuAI	ACCTGC	1 cut(s)	1088
BisI	GCNGC	3 cut(s)	174, 363, 1174
BlnI	CCTAGG	1 cut(s)	569
BlpI	GCTNAGC	1 cut(s)	366
BlsI	GCNGC	3 cut(s)	175, 364, 1175
Bme1390I	CCNGG	1 cut(s)	262
BmeRI	GACNNNNNGTC	1 cut(s)	157
BmiI	GGNNCC	3 cut(s)	567, 852, 1157
BmrFI	CCNGG	1 cut(s)	262
BmtI	GCTAGC	1 cut(s)	639
BoxI	GACNNNNGTC	2 cut(s)	506, 717
BpiI	GAAGAC	1 cut(s)	153
BpmI	CTGGAG	2 cut(s)	344, 1029
Bpu1102I	GCTNAGC	1 cut(s)	366
BpuEI	CTTGAG	3 cut(s)	392, 436, 498
BpuMI	CCSGG	1 cut(s)	262
BsaHI	GRCGYC	1 cut(s)	1156
BsaJI	CCNNGG	4 cut(s)	30, 86, 261, 569
BsaXI	ACNNNNNCTCC	4 cut(s)	63, 93, 176, 206
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 267, 803, 1294
Bse1I	ACTGG	4 cut(s)	632, 1140, 1157, 1159
Bse3DI	GCAATG	4 cut(s)	361, 544, 646, 1033
BseDI	CCNNGG	4 cut(s)	30, 86, 261, 569
BseGI	GGATG	4 cut(s)	59, 253, 661, 1303
BseLI	CCNNNNNNNGG	4 cut(s)	22, 267, 803, 1294
BseMI	GCAATG	4 cut(s)	361, 544, 646, 1033
BseMII	CTCAG	4 cut(s)	341, 357, 406, 632
BseNI	ACTGG	4 cut(s)	632, 1140, 1157, 1159
BseRI	GAGGAG	3 cut(s)	194, 197, 242
BseXI	GCAGC	2 cut(s)	349, 1185
BsgI	GTGCAG	3 cut(s)	707, 809, 1131
Bsh1236I	CGCG	1 cut(s)	155
BshFI	GGCC	7 cut(s)	5, 35, 137, 260, 275, 311, 631
BshNI	GGYRCC	1 cut(s)	1155
BsiSI	CCGG	1 cut(s)	261
BslFI	GGGAC	1 cut(s)	587
BslI	CCNNNNNNNGG	4 cut(s)	22, 267, 803, 1294
BsmAI	GTCTC	1 cut(s)	653
BsmFI	GGGAC	1 cut(s)	587
BsnI	GGCC	7 cut(s)	5, 35, 137, 260, 275, 311, 631
Bsp1286I	GDGCHC	1 cut(s)	393
Bsp143I	GATC	1 cut(s)	621
Bsp1720I	GCTNAGC	1 cut(s)	366
Bsp19I	CCATGG	1 cut(s)	30
BspACI	CCGC	3 cut(s)	131, 173, 176
BspANI	GGCC	7 cut(s)	5, 35, 137, 260, 275, 311, 631
BspCNI	CTCAG	4 cut(s)	342, 358, 405, 631
BspFNI	CGCG	1 cut(s)	155
BspHI	TCATGA	1 cut(s)	799
BspLI	GGNNCC	3 cut(s)	567, 852, 1157
BspMAI	CTGCAG	2 cut(s)	24, 1175
BspMI	ACCTGC	1 cut(s)	1088
BspOI	GCTAGC	1 cut(s)	639
BspQI	GCTCTTC	2 cut(s)	528, 1110
BspT107I	GGYRCC	1 cut(s)	1155
BsrDI	GCAATG	4 cut(s)	361, 544, 646, 1033
BsrI	ACTGG	4 cut(s)	632, 1140, 1157, 1159
BssECI	CCNNGG	4 cut(s)	30, 86, 261, 569
BssMI	GATC	1 cut(s)	621
BssNI	GRCGYC	1 cut(s)	1156
BssT1I	CCWWGG	2 cut(s)	30, 569
Bst4CI	ACNGT	4 cut(s)	204, 437, 475, 923
Bst6I	CTCTTC	2 cut(s)	528, 1110
BstACI	GRCGYC	1 cut(s)	1156
BstC8I	GCNNGC	3 cut(s)	449, 633, 637
BstDEI	CTNAG	4 cut(s)	350, 366, 392, 618
BstDSI	CCRYGG	1 cut(s)	30
BstENI	CCTNNNNNAGG	1 cut(s)	801
BstF5I	GGATG	4 cut(s)	59, 253, 661, 1303
BstFNI	CGCG	1 cut(s)	155
BstH2I	RGCGCY	1 cut(s)	1159
BstHHI	GCGC	3 cut(s)	876, 1158, 1305
BstKTI	GATC	1 cut(s)	624
BstMAI	GTCTC	1 cut(s)	653
BstMBI	GATC	1 cut(s)	621
BstMWI	GCNNNNNNNGC	1 cut(s)	605
BstNSI	RCATGY	2 cut(s)	758, 1281
BstPAI	GACNNNNGTC	2 cut(s)	506, 717
BstSCI	CCNGG	1 cut(s)	260
BstSFI	CTRYAG	3 cut(s)	20, 609, 1171
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	2 cut(s)	349, 1185
BstV2I	GAAGAC	1 cut(s)	153
BsuRI	GGCC	7 cut(s)	5, 35, 137, 260, 275, 311, 631
BtgI	CCRYGG	1 cut(s)	30
BtsCI	GGATG	4 cut(s)	59, 253, 661, 1303
BtsI	GCAGTG	1 cut(s)	797
BtsIMutI	CAGTG	5 cut(s)	480, 797, 1133, 1150, 1166
BveI	ACCTGC	1 cut(s)	1088
Cac8I	GCNNGC	3 cut(s)	449, 633, 637
CciI	TCATGA	1 cut(s)	799
CfoI	GCGC	3 cut(s)	876, 1158, 1305
CseI	GACGC	4 cut(s)	144, 161, 293, 467
Csp6I	GTAC	1 cut(s)	396
CspCI	CAANNNNNGTGG	2 cut(s)	1196, 1231
CviAII	CATG	6 cut(s)	31, 244, 755, 800, 1024, 1278
CviQI	GTAC	1 cut(s)	396
DdeI	CTNAG	4 cut(s)	350, 366, 392, 618
DinI	GGCGCC	1 cut(s)	1157
DpnI	GATC	1 cut(s)	623
DpnII	GATC	1 cut(s)	621
DrdI	GACNNNNNNGTC	1 cut(s)	248
DriI	GACNNNNNGTC	1 cut(s)	157
DseDI	GACNNNNNNGTC	1 cut(s)	248
EaeI	YGGCCR	4 cut(s)	33, 258, 273, 629
Eam1104I	CTCTTC	2 cut(s)	528, 1110
Eam1105I	GACNNNNNGTC	1 cut(s)	157
EarI	CTCTTC	2 cut(s)	528, 1110
EciI	GGCGGA	2 cut(s)	146, 191
Eco130I	CCWWGG	2 cut(s)	30, 569
Eco147I	AGGCCT	1 cut(s)	137
Eco24I	GRGCYC	1 cut(s)	393
Eco57I	CTGAAG	1 cut(s)	837
EcoNI	CCTNNNNNAGG	1 cut(s)	801
EcoT14I	CCWWGG	2 cut(s)	30, 569
EcoT22I	ATGCAT	1 cut(s)	1025
EcoT38I	GRGCYC	1 cut(s)	393
EgeI	GGCGCC	1 cut(s)	1157
EheI	GGCGCC	1 cut(s)	1157
ErhI	CCWWGG	2 cut(s)	30, 569
FaeI	CATG	6 cut(s)	34, 247, 758, 803, 1027, 1281
FalI	AAGNNNNNCTT	2 cut(s)	507, 539
FaqI	GGGAC	1 cut(s)	587
FatI	CATG	6 cut(s)	30, 243, 754, 799, 1023, 1277
FauNDI	CATATG	1 cut(s)	1179
Fnu4HI	GCNGC	3 cut(s)	174, 363, 1174
FokI	GGATG	4 cut(s)	46, 260, 668, 1310
FriOI	GRGCYC	1 cut(s)	393
Fsp4HI	GCNGC	3 cut(s)	174, 363, 1174
FspBI	CTAG	4 cut(s)	288, 570, 636, 696
GlaI	GCGC	3 cut(s)	875, 1157, 1304
GluI	GCNGC	3 cut(s)	174, 363, 1174
GsuI	CTGGAG	2 cut(s)	344, 1029
HaeII	RGCGCY	1 cut(s)	1159
HaeIII	GGCC	7 cut(s)	5, 35, 137, 260, 275, 311, 631
HapII	CCGG	1 cut(s)	261
HgaI	GACGC	4 cut(s)	144, 161, 293, 467
HhaI	GCGC	3 cut(s)	876, 1158, 1305
Hin1I	GRCGYC	1 cut(s)	1156
Hin1II	CATG	6 cut(s)	34, 247, 758, 803, 1027, 1281
Hin6I	GCGC	3 cut(s)	874, 1156, 1303
HinP1I	GCGC	3 cut(s)	874, 1156, 1303
HindIII	AAGCTT	1 cut(s)	449
HinfI	GANTC	8 cut(s)	38, 91, 125, 319, 812, 882, 890, 1011
HpaII	CCGG	1 cut(s)	261
HphI	GGTGA	1 cut(s)	112
Hpy166II	GTNNAC	2 cut(s)	919, 1168
Hpy188I	TCNGA	5 cut(s)	90, 300, 351, 621, 817
Hpy8I	GTNNAC	2 cut(s)	919, 1168
Hpy99I	CGWCG	3 cut(s)	155, 160, 169
HpyAV	CCTTC	8 cut(s)	16, 163, 380, 564, 797, 907, 1190, 1255
HpyCH4III	ACNGT	4 cut(s)	204, 437, 475, 923
HpyF10VI	GCNNNNNNNGC	1 cut(s)	605
HpyF3I	CTNAG	4 cut(s)	350, 366, 392, 618
Hsp92I	GRCGYC	1 cut(s)	1156
Hsp92II	CATG	6 cut(s)	34, 247, 758, 803, 1027, 1281
HspAI	GCGC	3 cut(s)	874, 1156, 1303
KasI	GGCGCC	1 cut(s)	1155
Kzo9I	GATC	1 cut(s)	621
LguI	GCTCTTC	2 cut(s)	528, 1110
LmnI	GCTCC	3 cut(s)	780, 850, 1250
Lsp1109I	GCAGC	2 cut(s)	349, 1185
MaeI	CTAG	4 cut(s)	288, 570, 636, 696
MaeIII	GTNAC	7 cut(s)	281, 424, 463, 508, 904, 1131, 1202
MalI	GATC	1 cut(s)	623
MboI	GATC	1 cut(s)	621
MboII	GAAGA	6 cut(s)	153, 328, 515, 692, 885, 1127
MfeI	CAATTG	3 cut(s)	708, 1051, 1121
MhlI	GDGCHC	1 cut(s)	393
MlsI	TGGCCA	1 cut(s)	631
MluCI	AATT	8 cut(s)	103, 536, 593, 669, 708, 736, 1051, 1121
MluI	ACGCGT	1 cut(s)	153
MluNI	TGGCCA	1 cut(s)	631
Mly113I	GGCGCC	1 cut(s)	1156
MlyI	GAGTC	4 cut(s)	32, 119, 821, 1020
MmeI	TCCRAC	2 cut(s)	40, 76
Mox20I	TGGCCA	1 cut(s)	631
Mph1103I	ATGCAT	1 cut(s)	1025
MroXI	GAANNNNTTC	1 cut(s)	703
MscI	TGGCCA	1 cut(s)	631
MseI	TTAA	3 cut(s)	579, 774, 947
MslI	CAYNNNNRTG	1 cut(s)	1276
Msp20I	TGGCCA	1 cut(s)	631
MspA1I	CMGCKG	1 cut(s)	717
MspI	CCGG	1 cut(s)	261
MspR9I	CCNGG	1 cut(s)	262
MunI	CAATTG	3 cut(s)	708, 1051, 1121
MvnI	CGCG	1 cut(s)	155
MwoI	GCNNNNNNNGC	1 cut(s)	605
NarI	GGCGCC	1 cut(s)	1156
NciI	CCSGG	1 cut(s)	262
NcoI	CCATGG	1 cut(s)	30
NdeI	CATATG	1 cut(s)	1179
NdeII	GATC	1 cut(s)	621
NheI	GCTAGC	1 cut(s)	635
NlaIII	CATG	6 cut(s)	34, 247, 758, 803, 1027, 1281
NlaIV	GGNNCC	3 cut(s)	567, 852, 1157
NmeAIII	GCCGAG	1 cut(s)	107
NmuCI	GTSAC	5 cut(s)	281, 424, 463, 508, 1131
NsiI	ATGCAT	1 cut(s)	1025
NspI	RCATGY	2 cut(s)	758, 1281
PagI	TCATGA	1 cut(s)	799
PceI	AGGCCT	1 cut(s)	137
PciI	ACATGT	1 cut(s)	1277
PciSI	GCTCTTC	2 cut(s)	528, 1110
PcsI	WCGNNNNNNNCGW	3 cut(s)	120, 152, 164
PdmI	GAANNNNTTC	1 cut(s)	703
PfeI	GAWTC	4 cut(s)	91, 319, 882, 890
PkrI	GCNGC	3 cut(s)	175, 364, 1175
PleI	GAGTC	4 cut(s)	32, 119, 820, 1019
PluTI	GGCGCC	1 cut(s)	1159
PpsI	GAGTC	4 cut(s)	32, 119, 820, 1019
PscI	ACATGT	1 cut(s)	1277
PshAI	GACNNNNGTC	2 cut(s)	506, 717
PshBI	ATTAAT	1 cut(s)	947
PsiI	TTATAA	1 cut(s)	1313
PspN4I	GGNNCC	3 cut(s)	567, 852, 1157
PstI	CTGCAG	2 cut(s)	24, 1175
PvuII	CAGCTG	1 cut(s)	717
RsaI	GTAC	1 cut(s)	397
RsaNI	GTAC	1 cut(s)	396
RseI	CAYNNNNRTG	1 cut(s)	1276
SapI	GCTCTTC	2 cut(s)	528, 1110
SaqAI	TTAA	3 cut(s)	579, 774, 947
SatI	GCNGC	3 cut(s)	174, 363, 1174
Sau3AI	GATC	1 cut(s)	621
SchI	GAGTC	4 cut(s)	32, 119, 821, 1020
ScrFI	CCNGG	1 cut(s)	262
SduI	GDGCHC	1 cut(s)	393
SfcI	CTRYAG	3 cut(s)	20, 609, 1171
SfoI	GGCGCC	1 cut(s)	1157
SmiMI	CAYNNNNRTG	1 cut(s)	1276
SmlI	CTYRAG	3 cut(s)	371, 415, 513
SmoI	CTYRAG	3 cut(s)	371, 415, 513
Sse9I	AATT	8 cut(s)	103, 536, 593, 669, 708, 736, 1051, 1121
SseBI	AGGCCT	1 cut(s)	137
SsiI	CCGC	3 cut(s)	131, 173, 176
SspDI	GGCGCC	1 cut(s)	1155
SspMI	CTAG	4 cut(s)	288, 570, 636, 696
StuI	AGGCCT	1 cut(s)	137
StyD4I	CCNGG	1 cut(s)	260
StyI	CCWWGG	2 cut(s)	30, 569
TaaI	ACNGT	4 cut(s)	204, 437, 475, 923
TaqI	TCGA	3 cut(s)	114, 167, 1068
TasI	AATT	8 cut(s)	103, 536, 593, 669, 708, 736, 1051, 1121
TatI	WGTACW	1 cut(s)	395
TauI	GCSGC	1 cut(s)	176
TfiI	GAWTC	4 cut(s)	91, 319, 882, 890
Tru1I	TTAA	3 cut(s)	579, 774, 947
Tru9I	TTAA	3 cut(s)	579, 774, 947
TscAI	CASTG	5 cut(s)	480, 797, 1140, 1157, 1166
TseFI	GTSAC	5 cut(s)	281, 424, 463, 508, 1131
TseI	GCWGC	2 cut(s)	362, 1173
Tsp45I	GTSAC	5 cut(s)	281, 424, 463, 508, 1131
TspDTI	ATGAA	3 cut(s)	761, 816, 1142
TspGWI	ACGGA	1 cut(s)	923
TspRI	CASTG	5 cut(s)	480, 797, 1140, 1157, 1166
VspI	ATTAAT	1 cut(s)	947
XagI	CCTNNNNNAGG	1 cut(s)	801
XapI	RAATTY	1 cut(s)	536
XceI	RCATGY	2 cut(s)	758, 1281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	319
XmaJI	CCTAGG	1 cut(s)	569
XmnI	GAANNNNTTC	1 cut(s)	703
XspI	CTAG	4 cut(s)	288, 570, 636, 696
Zsp2I	ATGCAT	1 cut(s)	1025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.