Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Reverse (-)

28868036 .. 28870107

Gene Structure 2072 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g33470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGACGATCGTGGAGACGCAGAAGACCTCCAGGCCATCCTGGCCGAGCAGCGTAGTGAGCTCTTGGCGGCCAAAACCCTAGACTCCGACCTCGGCATGGCCTTCAATCTTCAAATGAAAGAGGCCCTCACCGCCTCTCTGGCTCTCCAACCCTCCTCCAGTACTTCCCGCTCTCCGCCTCCGTCGCCGCCGTACGAGCCCAAGGACGAAGTCTTGGACCTCGCCGCAGCGTTCATGCTCGAAGACGTGGAGAGGTTTCCTCAGGAGTACGAGGACCACGAACGCAGCGTTTTGGAGGTGAAGAAGCTCAAGGCGGATCTCGACCGTCGTATTCACGACCAGAAGTTCGCGGTCGACGTCTCAAACTTGCCGGAGGAGTACTGGAGTGAGTACGGAGACGAATACGAAAGGCCGTACTGTACGGACGGGTCGTCGTCTTCGAAAGCTGAGGGTTTGAGATTGTATTGTAAGGGCTTGATCAGTGAAGAGATGATCAAGAACGTGAGTGGGATTGGGGTTGCGATCTGTGATCCTAGAGATAATCTGATTTTCGAGGCGAAGAAGAATCTAGAAGTGTTGATTGAGGGCGAGATTATGAGCAATGAGGCTGCGGAGCTGGAGGCTCTGTGTGAAGGGCTGAGTAAAGCTCTCACATTGGACTTGAAAAATGTCACCTTTTTCATTGATAACGACAAGCTTTACCAATATGTTACAAACGAAGTGATTCCTGGGAACAGCAAGATTGCAGCATTAGTCAATCAAGTTGCTCTTCTACAAAGAAAATTTGAATCTTGCAGGCCTTCTCTTGTGGCACCTAGTGTAATAAAGTTTGCTTTTAAATTTGCAAGAGATGCTATAGTTTCTCAGATCAGCTGGTGTGTAAAAACTCACAGTGGCAAGAGTTTCAAGGAGACTTGTGCAATTTGTATTGAAGAAACTGATGTTGCTCGCATGTTTTCAATCGATGGTTGTCTGCACAGGTATTGCATTTCTTGTATGAAAAAACATGTGGAAGTAAAGTTGCTTAGTGGGATGTTGGCGCAGTGTCCACATGAAGCGTGTAATTCTGAGGTGAATATCGATAGCTATGAACAATTCTTGGCACCTAATATTGTTGCGGTTATGAGCCAGCGAATCAAGGAATCTTCTATTCCTGTTAGAGAGAGAGTATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

392

Amino Acids

43.81

Weight (kDa)

4.86

Isoelectric Point (pI)

48.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_3	PF13456	166 - 285	2e-19	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	360
AccB1I	GGYRCC	2 cut(s)	811, 1102
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	1 cut(s)	354
AccII	CGCG	1 cut(s)	350
AclWI	GGATC	2 cut(s)	324, 524
AcoI	YGGCCR	2 cut(s)	42, 69
AcsI	RAATTY	2 cut(s)	782, 839
AcyI	GRCGYC	1 cut(s)	357
AdeI	CACNNNGTG	1 cut(s)	818
AfaI	GTAC	7 cut(s)	163, 194, 269, 380, 392, 416, 421
AfiI	CCNNNNNNNGG	1 cut(s)	97
AflIII	ACRYGT	1 cut(s)	1006
AgsI	TTSAA	7 cut(s)	106, 113, 664, 788, 907, 932, 960
AhdI	GACNNNNNGTC	1 cut(s)	430
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	3 cut(s)	30, 39, 727
AluBI	AGCT	8 cut(s)	61, 307, 446, 616, 647, 697, 873, 1086
AluI	AGCT	8 cut(s)	61, 307, 446, 616, 647, 697, 873, 1086
Alw21I	GWGCWC	1 cut(s)	63
Alw26I	GTCTC	4 cut(s)	9, 364, 390, 905
AlwI	GGATC	2 cut(s)	324, 524
AoxI	GGCC	7 cut(s)	33, 42, 69, 99, 123, 410, 797
ApeKI	GCWGC	5 cut(s)	49, 227, 285, 608, 746
ApoI	RAATTY	2 cut(s)	782, 839
ArsI	GACNNNNNNTTYG	2 cut(s)	329, 361
Asp700I	GAANNNNTTC	1 cut(s)	723
AspLEI	GCGC	1 cut(s)	1042
AspS9I	GGNCC	3 cut(s)	124, 217, 274
AsuHPI	GGTGA	4 cut(s)	121, 310, 664, 1084
AsuII	TTCGAA	1 cut(s)	440
AvaII	GGWCC	2 cut(s)	217, 274
AxyI	CCTNAGG	1 cut(s)	261
BanI	GGYRCC	2 cut(s)	811, 1102
BanII	GRGCYC	2 cut(s)	63, 201
BbsI	GAAGAC	3 cut(s)	30, 249, 429
Bbv12I	GWGCWC	1 cut(s)	63
BbvCI	CCTCAGC	1 cut(s)	447
BbvI	GCAGC	5 cut(s)	61, 239, 297, 595, 758
BccI	CCATC	2 cut(s)	44, 959
BceAI	ACGGC	2 cut(s)	175, 397
BciT130I	CCWGG	3 cut(s)	32, 41, 729
BclI	TGATCA	2 cut(s)	477, 492
BcoDI	GTCTC	4 cut(s)	9, 364, 390, 905
BfaI	CTAG	4 cut(s)	80, 534, 569, 816
BfmI	CTRYAG	1 cut(s)	855
BglI	GCCNNNNNGGC	2 cut(s)	41, 140
BisI	GCNGC	8 cut(s)	50, 69, 188, 225, 228, 286, 609, 747
BlsI	GCNGC	8 cut(s)	51, 70, 189, 226, 229, 287, 610, 748
BmcAI	AGTACT	2 cut(s)	163, 380
Bme1390I	CCNGG	3 cut(s)	32, 41, 729
Bme18I	GGWCC	2 cut(s)	217, 274
BmeRI	GACNNNNNGTC	1 cut(s)	430
BmgBI	CACGTC	1 cut(s)	247
BmgT120I	GGNCC	3 cut(s)	124, 217, 274
BmiI	GGNNCC	2 cut(s)	813, 1104
BmrFI	CCNGG	3 cut(s)	32, 41, 729
BmsI	GCATC	1 cut(s)	841
BpiI	GAAGAC	3 cut(s)	30, 249, 429
BplI	GAGNNNNNCTC	4 cut(s)	244, 276, 631, 663
BpmI	CTGGAG	4 cut(s)	14, 142, 403, 638
Bpu10I	CCTNAGC	1 cut(s)	447
Bpu14I	TTCGAA	1 cut(s)	440
BpuEI	CTTGAG	1 cut(s)	293
Bsa29I	ATCGAT	2 cut(s)	963, 1080
BsaHI	GRCGYC	1 cut(s)	357
BsaJI	CCNNGG	3 cut(s)	91, 201, 728
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	1 cut(s)	97
Bse1I	ACTGG	2 cut(s)	159, 386
Bse21I	CCTNAGG	1 cut(s)	261
Bse3DI	GCAATG	1 cut(s)	607
BseBI	CCWGG	3 cut(s)	32, 41, 729
BseCI	ATCGAT	2 cut(s)	963, 1080
BseDI	CCNNGG	3 cut(s)	91, 201, 728
BseGI	GGATG	2 cut(s)	36, 1038
BseLI	CCNNNNNNNGG	1 cut(s)	97
BseMI	GCAATG	1 cut(s)	607
BseMII	CTCAG	5 cut(s)	275, 438, 629, 878, 1059
BseNI	ACTGG	2 cut(s)	159, 386
BseRI	GAGGAG	2 cut(s)	145, 389
BseXI	GCAGC	5 cut(s)	61, 239, 297, 595, 758
BsgI	GTGCAG	1 cut(s)	959
Bsh1236I	CGCG	1 cut(s)	350
Bsh1285I	CGRYCG	3 cut(s)	10, 325, 354
BshFI	GGCC	7 cut(s)	35, 44, 71, 101, 125, 412, 799
BshNI	GGYRCC	2 cut(s)	811, 1102
BshVI	ATCGAT	2 cut(s)	963, 1080
BsiEI	CGRYCG	3 cut(s)	10, 325, 354
BsiHKAI	GWGCWC	1 cut(s)	63
BsiSI	CCGG	1 cut(s)	371
BsiWI	CGTACG	1 cut(s)	192
BslI	CCNNNNNNNGG	1 cut(s)	97
BsmAI	GTCTC	4 cut(s)	9, 364, 390, 905
BsmBI	CGTCTC	3 cut(s)	9, 364, 390
BsnI	GGCC	7 cut(s)	35, 44, 71, 101, 125, 412, 799
Bsp119I	TTCGAA	1 cut(s)	440
Bsp1286I	GDGCHC	2 cut(s)	63, 201
Bsp143I	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
BspANI	GGCC	7 cut(s)	35, 44, 71, 101, 125, 412, 799
BspCNI	CTCAG	5 cut(s)	274, 439, 630, 877, 1060
BspDI	ATCGAT	2 cut(s)	963, 1080
BspFNI	CGCG	1 cut(s)	350
BspLI	GGNNCC	2 cut(s)	813, 1104
BspPI	GGATC	2 cut(s)	324, 524
BspQI	GCTCTTC	1 cut(s)	774
BspT104I	TTCGAA	1 cut(s)	440
BspT107I	GGYRCC	2 cut(s)	811, 1102
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	1 cut(s)	607
BsrI	ACTGG	2 cut(s)	159, 386
BssECI	CCNNGG	3 cut(s)	91, 201, 728
BssMI	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
BssNI	GRCGYC	1 cut(s)	357
BssT1I	CCWWGG	1 cut(s)	201
Bst2UI	CCWGG	3 cut(s)	32, 41, 729
Bst4CI	ACNGT	3 cut(s)	326, 419, 893
Bst6I	CTCTTC	2 cut(s)	480, 774
BstACI	GRCGYC	1 cut(s)	357
BstAPI	GCANNNNNTGC	1 cut(s)	851
BstBI	TTCGAA	1 cut(s)	440
BstC8I	GCNNGC	3 cut(s)	797, 949, 1130
BstDEI	CTNAG	6 cut(s)	261, 447, 638, 864, 1025, 1068
BstF5I	GGATG	2 cut(s)	36, 1038
BstFNI	CGCG	1 cut(s)	350
BstHHI	GCGC	1 cut(s)	1042
BstKTI	GATC	7 cut(s)	10, 319, 480, 495, 525, 532, 870
BstMAI	GTCTC	4 cut(s)	9, 364, 390, 905
BstMBI	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
BstMCI	CGRYCG	3 cut(s)	10, 325, 354
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 58, 131, 140, 184, 196, 851
BstNI	CCWGG	3 cut(s)	32, 41, 729
BstNSI	RCATGY	2 cut(s)	955, 1010
BstSCI	CCNGG	3 cut(s)	30, 39, 727
BstSFI	CTRYAG	1 cut(s)	855
BstUI	CGCG	1 cut(s)	350
BstV1I	GCAGC	5 cut(s)	61, 239, 297, 595, 758
BstV2I	GAAGAC	3 cut(s)	30, 249, 429
BstX2I	RGATCY	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	316
Bsu15I	ATCGAT	2 cut(s)	963, 1080
Bsu36I	CCTNAGG	1 cut(s)	261
BsuRI	GGCC	7 cut(s)	35, 44, 71, 101, 125, 412, 799
BsuTUI	ATCGAT	2 cut(s)	963, 1080
BtrI	CACGTC	1 cut(s)	247
BtsCI	GGATG	2 cut(s)	36, 1038
BtsI	GCAGTG	1 cut(s)	1049
BtsIMutI	CAGTG	3 cut(s)	487, 898, 1049
Cac8I	GCNNGC	3 cut(s)	797, 949, 1130
CfoI	GCGC	1 cut(s)	1042
Cfr13I	GGNCC	3 cut(s)	124, 217, 274
ClaI	ATCGAT	2 cut(s)	963, 1080
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	7 cut(s)	162, 193, 268, 379, 391, 415, 420
CviAII	CATG	5 cut(s)	97, 235, 952, 1007, 1052
CviQI	GTAC	7 cut(s)	162, 193, 268, 379, 391, 415, 420
DdeI	CTNAG	6 cut(s)	261, 447, 638, 864, 1025, 1068
DpnI	GATC	7 cut(s)	9, 318, 479, 494, 524, 531, 869
DpnII	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
DraI	TTTAAA	1 cut(s)	838
DraIII	CACNNNGTG	1 cut(s)	818
DriI	GACNNNNNGTC	1 cut(s)	430
EaeI	YGGCCR	2 cut(s)	42, 69
Eam1104I	CTCTTC	2 cut(s)	480, 774
Eam1105I	GACNNNNNGTC	1 cut(s)	430
EarI	CTCTTC	2 cut(s)	480, 774
EciI	GGCGGA	2 cut(s)	165, 329
Ecl136II	GAGCTC	1 cut(s)	61
Eco130I	CCWWGG	1 cut(s)	201
Eco147I	AGGCCT	1 cut(s)	799
Eco24I	GRGCYC	2 cut(s)	63, 201
Eco47I	GGWCC	2 cut(s)	217, 274
Eco53kI	GAGCTC	1 cut(s)	61
Eco81I	CCTNAGG	1 cut(s)	261
EcoICRI	GAGCTC	1 cut(s)	61
EcoO109I	RGGNCCY	1 cut(s)	124
EcoRII	CCWGG	3 cut(s)	30, 39, 727
EcoT14I	CCWWGG	1 cut(s)	201
EcoT38I	GRGCYC	2 cut(s)	63, 201
ErhI	CCWWGG	1 cut(s)	201
Esp3I	CGTCTC	3 cut(s)	9, 364, 390
FaeI	CATG	5 cut(s)	100, 238, 955, 1010, 1055
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FatI	CATG	5 cut(s)	96, 234, 951, 1006, 1051
FauI	CCCGC	1 cut(s)	176
FbaI	TGATCA	2 cut(s)	477, 492
FblI	GTMKAC	1 cut(s)	354
Fnu4HI	GCNGC	8 cut(s)	50, 69, 188, 225, 228, 286, 609, 747
FokI	GGATG	2 cut(s)	23, 1045
FriOI	GRGCYC	2 cut(s)	63, 201
Fsp4HI	GCNGC	8 cut(s)	50, 69, 188, 225, 228, 286, 609, 747
FspBI	CTAG	4 cut(s)	80, 534, 569, 816
GlaI	GCGC	1 cut(s)	1041
GluI	GCNGC	8 cut(s)	50, 69, 188, 225, 228, 286, 609, 747
GsuI	CTGGAG	4 cut(s)	14, 142, 403, 638
HaeIII	GGCC	7 cut(s)	35, 44, 71, 101, 125, 412, 799
HapII	CCGG	1 cut(s)	371
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	1 cut(s)	1042
Hin1I	GRCGYC	1 cut(s)	357
Hin1II	CATG	5 cut(s)	100, 238, 955, 1010, 1055
Hin6I	GCGC	1 cut(s)	1040
HinP1I	GCGC	1 cut(s)	1040
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HindIII	AAGCTT	1 cut(s)	695
HinfI	GANTC	6 cut(s)	83, 565, 724, 788, 1134, 1142
HpaII	CCGG	1 cut(s)	371
HphI	GGTGA	4 cut(s)	121, 310, 664, 1084
Hpy166II	GTNNAC	2 cut(s)	355, 1049
Hpy188I	TCNGA	4 cut(s)	88, 546, 867, 1069
Hpy188III	TCNNGA	5 cut(s)	263, 320, 335, 496, 569
Hpy8I	GTNNAC	2 cut(s)	355, 1049
Hpy99I	CGWCG	4 cut(s)	187, 330, 359, 436
HpyAV	CCTTC	3 cut(s)	112, 626, 810
HpyCH4III	ACNGT	3 cut(s)	326, 419, 893
HpyCH4IV	ACGT	3 cut(s)	246, 357, 501
HpyCH4V	TGCA	6 cut(s)	746, 795, 845, 920, 976, 987
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 58, 131, 140, 184, 196, 851
HpyF3I	CTNAG	6 cut(s)	261, 447, 638, 864, 1025, 1068
HpySE526I	ACGT	3 cut(s)	246, 357, 501
Hsp92I	GRCGYC	1 cut(s)	357
Hsp92II	CATG	5 cut(s)	100, 238, 955, 1010, 1055
HspAI	GCGC	1 cut(s)	1040
Ksp22I	TGATCA	2 cut(s)	477, 492
Kzo9I	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
LguI	GCTCTTC	1 cut(s)	774
LmnI	GCTCC	1 cut(s)	613
Lsp1109I	GCAGC	5 cut(s)	61, 239, 297, 595, 758
LweI	GCATC	1 cut(s)	841
MaeI	CTAG	4 cut(s)	80, 534, 569, 816
MaeII	ACGT	3 cut(s)	246, 357, 501
MaeIII	GTNAC	2 cut(s)	670, 709
MalI	GATC	7 cut(s)	9, 318, 479, 494, 524, 531, 869
MbiI	CCGCTC	1 cut(s)	171
MboI	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
MflI	RGATCY	1 cut(s)	316
MhlI	GDGCHC	2 cut(s)	63, 201
MluCI	AATT	5 cut(s)	782, 839, 921, 1063, 1094
MlyI	GAGTC	1 cut(s)	77
MmeI	TCCRAC	2 cut(s)	111, 172
MroXI	GAANNNNTTC	1 cut(s)	723
MseI	TTAA	1 cut(s)	837
MspA1I	CMGCKG	1 cut(s)	873
MspI	CCGG	1 cut(s)	371
MspR9I	CCNGG	3 cut(s)	32, 41, 729
MvaI	CCWGG	3 cut(s)	32, 41, 729
MvnI	CGCG	1 cut(s)	350
MwoI	GCNNNNNNNGC	7 cut(s)	41, 58, 131, 140, 184, 196, 851
NdeII	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
NlaIII	CATG	5 cut(s)	100, 238, 955, 1010, 1055
NlaIV	GGNNCC	2 cut(s)	813, 1104
NmeAIII	GCCGAG	2 cut(s)	70, 72
NmuCI	GTSAC	1 cut(s)	670
NspI	RCATGY	2 cut(s)	955, 1010
NspV	TTCGAA	1 cut(s)	440
PceI	AGGCCT	1 cut(s)	799
PciI	ACATGT	1 cut(s)	1006
PciSI	GCTCTTC	1 cut(s)	774
PcsI	WCGNNNNNNNCGW	5 cut(s)	276, 285, 354, 428, 437
PdmI	GAANNNNTTC	1 cut(s)	723
PfeI	GAWTC	5 cut(s)	565, 724, 788, 1134, 1142
Pfl23II	CGTACG	1 cut(s)	192
PflFI	GACNNNGTC	1 cut(s)	209
PkrI	GCNGC	8 cut(s)	51, 70, 189, 226, 229, 287, 610, 748
Ple19I	CGATCG	1 cut(s)	10
PleI	GAGTC	1 cut(s)	77
PpsI	GAGTC	1 cut(s)	77
PscI	ACATGT	1 cut(s)	1006
Psp124BI	GAGCTC	1 cut(s)	63
Psp6I	CCWGG	3 cut(s)	30, 39, 727
PspGI	CCWGG	3 cut(s)	30, 39, 727
PspLI	CGTACG	1 cut(s)	192
PspN4I	GGNNCC	2 cut(s)	813, 1104
PspPI	GGNCC	3 cut(s)	124, 217, 274
PsuI	RGATCY	1 cut(s)	316
PsyI	GACNNNGTC	1 cut(s)	209
PvuI	CGATCG	1 cut(s)	10
PvuII	CAGCTG	1 cut(s)	873
RsaI	GTAC	7 cut(s)	163, 194, 269, 380, 392, 416, 421
RsaNI	GTAC	7 cut(s)	162, 193, 268, 379, 391, 415, 420
SacI	GAGCTC	1 cut(s)	63
SalI	GTCGAC	1 cut(s)	353
SapI	GCTCTTC	1 cut(s)	774
SaqAI	TTAA	1 cut(s)	837
SatI	GCNGC	8 cut(s)	50, 69, 188, 225, 228, 286, 609, 747
Sau3AI	GATC	7 cut(s)	7, 316, 477, 492, 522, 529, 867
Sau96I	GGNCC	3 cut(s)	124, 217, 274
ScaI	AGTACT	2 cut(s)	163, 380
SchI	GAGTC	1 cut(s)	77
ScrFI	CCNGG	3 cut(s)	32, 41, 729
SduI	GDGCHC	2 cut(s)	63, 201
SfaNI	GCATC	1 cut(s)	841
SfcI	CTRYAG	1 cut(s)	855
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
SfuI	TTCGAA	1 cut(s)	440
SinI	GGWCC	2 cut(s)	217, 274
SmlI	CTYRAG	1 cut(s)	308
SmoI	CTYRAG	1 cut(s)	308
Sse9I	AATT	5 cut(s)	782, 839, 921, 1063, 1094
SseBI	AGGCCT	1 cut(s)	799
SspI	AATATT	1 cut(s)	1111
SspMI	CTAG	4 cut(s)	80, 534, 569, 816
SstI	GAGCTC	1 cut(s)	63
StuI	AGGCCT	1 cut(s)	799
StyD4I	CCNGG	3 cut(s)	30, 39, 727
StyI	CCWWGG	1 cut(s)	201
TaaI	ACNGT	3 cut(s)	326, 419, 893
TaiI	ACGT	3 cut(s)	249, 360, 504
TaqI	TCGA	7 cut(s)	240, 321, 354, 440, 552, 963, 1080
TasI	AATT	5 cut(s)	782, 839, 921, 1063, 1094
TatI	WGTACW	2 cut(s)	161, 378
TauI	GCSGC	3 cut(s)	71, 190, 227
TfiI	GAWTC	5 cut(s)	565, 724, 788, 1134, 1142
Tru1I	TTAA	1 cut(s)	837
Tru9I	TTAA	1 cut(s)	837
TscAI	CASTG	3 cut(s)	487, 898, 1049
TseFI	GTSAC	1 cut(s)	670
TseI	GCWGC	5 cut(s)	49, 227, 285, 608, 746
Tsp45I	GTSAC	1 cut(s)	670
TspDTI	ATGAA	6 cut(s)	131, 223, 670, 1013, 1068, 1104
TspGWI	ACGGA	3 cut(s)	171, 408, 437
TspRI	CASTG	3 cut(s)	487, 898, 1049
Tth111I	GACNNNGTC	1 cut(s)	209
VpaK11BI	GGWCC	2 cut(s)	217, 274
XapI	RAATTY	2 cut(s)	782, 839
XbaI	TCTAGA	1 cut(s)	568
XceI	RCATGY	2 cut(s)	955, 1010
XmiI	GTMKAC	1 cut(s)	354
XmnI	GAANNNNTTC	1 cut(s)	723
XspI	CTAG	4 cut(s)	80, 534, 569, 816
ZraI	GACGTC	1 cut(s)	358
ZrmI	AGTACT	2 cut(s)	163, 380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.