Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Forward (+)

6501728 .. 6506317

Gene Structure 4590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G094100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGCCAGCAGCGTGTCACCCGATGACGACGGCGACGACGTTCTATTCGCCGTCTCCGAGCAACGTCGCGAGCTCATGGAAGCCGAATCCCTAGAGTCCGACATGGATCTCGCCTTTAATATCCAACTTCAAGAAGCCCTCGCCGCTTCTCTCGCTCTCCAACCCTCTTCCTCCTCCACCCAACCCTGTCGAAACGACGCCGTTCGGACCATCCCCAACACCCTAACCCACGTCTCCCTCAAGTCCGAAGAACTCATAAGAATGGAGCAGGAATTGAAAGACCGAGAAATCGAAAAGCGGAAAGCCAGAGAGGATCTCAACCGTCGGATTCACGATGATCAGGTCGGGAGGGAGATCAAGAAGATTCCAGAGGACGAGTGGCAAGAGTCCGGCGAAGTCTTCGCCAAACCCTTCGGCGAAGGCTCCTCCTCGTTGTCGTCGACGAAGAGGGTCGAGAGTGAGAGCGTGTTCAGGCTCTACTTCAAGGGTTTGGTGAGCGAGGAAATGGTTGGAAATGAGAAAGTGGTGCTGGCTGGGGTTGGGGTTGCGCTATGCGACTCCAGGGATAATTTGGTGTTCGAGGTTTGGAAACCCCTGATTGGGAATGGGATGAGCAAGAATGGAGCCCAGTTGAAAGCCTTGATTGAAGGACTTAATGCTGCTCTTGCTTTGGACTTGAAGCGCATCACCTTTTTCTGTGAGAATTTTCCCATTTTTCAGTTTGTTACTGGTAAATGGCAAGCAAAGCAGCACAAGATAGCAGTGCTTGTCAATCAGGTTAAGAGCCTTCAAGGAAAGTTTACACGTTGCAACCCAAGGCTTGTGCCCCGAAATCATATTAAATTTGTATTTAAACTTGCAAGAGATGCAATAGTGTCTCAATCTCAGACCAACCAACCTGCACAATCTACCACTTGTAAGAATGTGAATGAGACTTGTGTGATATGTTTGGAAGATACTGATGTTAGTCAAATGTTTTCGGTTGGGGGCTGCCTGCATCGGTATTGCTTTTCTTGTATGAAACAACATGTGGAGGTGAAGTTGCTTCACGGGATGATTCCTAGATGCCCTCATGAAGATTGTAAGTCTGACCTTAGTGTTGACAGTTGTGCAAAATTCTTGACACCTAAAGTTGTGGAAACAATGCGCCAACGCTTAAAGGAAGCTTCAATTCCTGCTGCGGAAAAAGTTTATTGCCCGTATCCAAGGTGCTCCGCTTTAATATCAAAACGTGAGCTTTTAGAACACTCCAAAAAAACCTTGAGGGATGTGGAACTATCAGGAATTAGGATATGCATGAAATGCAACTGCCTTTTCTGCGTCAATTGTAAAGTCCCTTGGCACAAAAACAGAACATGCTCTGACTACAAAAAGCTGAATCCTTATCCCCCAGAAGAAGATACAAAGCTAAAGTCTCTTGCCTCAAGGAATCTGTGGCGTCAGTGTGTGAAATGCAACCATATGATTGAACTTGCTGAAGGTTGCTACCACATGACTTGCAGATGTGGGTATGAGTTTTGCTATAATTGTGGAGCTGAGTGGAAAGATAAGAAGGCAACATGTTCTTGCCCACTATGGGATGAGGGTAATATTTTGTACGATGAAGATGAAGATGAAGATGAAGATTCAGAGGACGTGACAGAGTCAGATTCAGAGGAGTATTCTGACTACGAATATCTTTTACCAAATGCGGCGCCTGAGTTTTTCCATGTCAGTGGAGCTGAGTGGAATGTCGAAAAGGCAACATGTTCATGCCCAACATCAGATGAAGATGAGATCTTGTCTAACGAAGATGGAGACTTTGAGGAGGAGGAAGAGAAGGGTGAAGATGAGGAAGAAGACGAATATGAAGATGAAGATGAAGATGAAGTTGAGGATGAGTTTGAGGAAGAGAAGCAAATATTGTCTGCTGAAGATGATGCAGATTTTGATGAAGAATATGAGGAAATTCAAGAGAAAGAGGTTGGGGAGGACATTCAGGACGAAGAGGAGGAGGAGGTGGTTGAAGAAGGTGAGCATAACTTGTCTGCTGAAGACGATAGATATTTGGATGAAGAATATGAATATGGGGAATATGTGGAGGAGTATTGTGACTCTGACAGCGAGTGCTATGACTCTTACTCAGATTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

711

Amino Acids

81.32

Weight (kDa)

4.45

Isoelectric Point (pI)

53.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	907
AccB1I	GGYRCC	1 cut(s)	1693
AccI	GTMKAC	1 cut(s)	440
AccII	CGCG	1 cut(s)	69
AciI	CCGC	5 cut(s)	144, 298, 1181, 1215, 1691
AclWI	GGATC	2 cut(s)	114, 321
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	703, 842, 1115, 1947
AcuI	CTGAAG	3 cut(s)	1497, 1932, 2052
AcyI	GRCGYC	3 cut(s)	198, 1438, 1694
AfaI	GTAC	1 cut(s)	1598
AfiI	CCNNNNNNNGG	3 cut(s)	599, 600, 1576
AflIII	ACRYGT	4 cut(s)	803, 1027, 1559, 1745
AjiI	CACGTC	2 cut(s)	232, 1636
AjnI	CCWGG	1 cut(s)	560
AluBI	AGCT	7 cut(s)	73, 1166, 1237, 1375, 1408, 1535, 1721
AluI	AGCT	7 cut(s)	73, 1166, 1237, 1375, 1408, 1535, 1721
Alw21I	GWGCWC	2 cut(s)	75, 1214
Alw26I	GTCTC	6 cut(s)	58, 238, 882, 926, 1419, 1791
AlwI	GGATC	2 cut(s)	114, 321
AoxI	GGCC	1 cut(s)	3
ApeKI	GCWGC	5 cut(s)	9, 659, 748, 990, 1178
ApoI	RAATTY	4 cut(s)	703, 842, 1115, 1947
ArsI	GACNNNNNNTTYG	4 cut(s)	29, 61, 1397, 1429
AspLEI	GCGC	4 cut(s)	550, 684, 1149, 1696
AspS9I	GGNCC	1 cut(s)	207
AsuHPI	GGTGA	6 cut(s)	9, 505, 679, 1048, 1835, 2024
AvaII	GGWCC	1 cut(s)	207
BaeGI	GKGCMC	1 cut(s)	828
BaeI	ACNNNNGTAYC	2 cut(s)	948, 981
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	1693
BanII	GRGCYC	2 cut(s)	75, 628
BbsI	GAAGAC	3 cut(s)	391, 1845, 2040
Bbv12I	GWGCWC	2 cut(s)	75, 1214
BbvI	GCAGC	5 cut(s)	21, 646, 760, 977, 1165
BccI	CCATC	2 cut(s)	218, 1787
BceAI	ACGGC	3 cut(s)	35, 46, 185
BciT130I	CCWGG	1 cut(s)	562
BciVI	GTATCC	1 cut(s)	1212
BclI	TGATCA	1 cut(s)	337
BcoDI	GTCTC	6 cut(s)	58, 238, 882, 926, 1419, 1791
BfaI	CTAG	2 cut(s)	92, 1062
BfoI	RGCGCY	1 cut(s)	1697
BfuAI	ACCTGC	1 cut(s)	907
BfuI	GTATCC	1 cut(s)	1212
BglII	AGATCT	1 cut(s)	1776
BisI	GCNGC	7 cut(s)	10, 144, 660, 749, 991, 1179, 1692
BlsI	GCNGC	7 cut(s)	11, 145, 661, 750, 992, 1180, 1693
Bme1390I	CCNGG	1 cut(s)	562
Bme18I	GGWCC	1 cut(s)	207
BmgBI	CACGTC	2 cut(s)	232, 1636
BmgT120I	GGNCC	1 cut(s)	207
BmiI	GGNNCC	3 cut(s)	424, 625, 1695
BmrFI	CCNGG	1 cut(s)	562
BmrI	ACTGGG	1 cut(s)	622
BmsI	GCATC	5 cut(s)	693, 856, 1006, 1055, 1909
BmuI	ACTGGG	1 cut(s)	622
BpiI	GAAGAC	3 cut(s)	391, 1845, 2040
BplI	GAGNNNNNCTC	2 cut(s)	300, 332
BpmI	CTGGAG	1 cut(s)	544
BpuEI	CTTGAG	3 cut(s)	224, 1282, 1408
BsaHI	GRCGYC	3 cut(s)	198, 1438, 1694
BsaJI	CCNNGG	4 cut(s)	561, 815, 1205, 1337
BsaXI	ACNNNNNCTCC	2 cut(s)	1025, 1055
Bsc4I	CCNNNNNNNGG	3 cut(s)	599, 600, 1576
Bse1I	ACTGG	2 cut(s)	628, 733
BseBI	CCWGG	1 cut(s)	562
BseDI	CCNNGG	4 cut(s)	561, 815, 1205, 1337
BseGI	GGATG	7 cut(s)	210, 615, 1059, 1273, 1585, 1882, 2056
BseLI	CCNNNNNNNGG	3 cut(s)	599, 600, 1576
BseMII	CTCAG	4 cut(s)	899, 1527, 1689, 1713
BseNI	ACTGG	2 cut(s)	628, 733
BseSI	GKGCMC	1 cut(s)	828
BseXI	GCAGC	5 cut(s)	21, 646, 760, 977, 1165
BseYI	CCCAGC	1 cut(s)	533
BsgI	GTGCAG	1 cut(s)	885
Bsh1236I	CGCG	1 cut(s)	69
BshFI	GGCC	1 cut(s)	5
BshNI	GGYRCC	1 cut(s)	1693
BsiHKAI	GWGCWC	2 cut(s)	75, 1214
BsiSI	CCGG	1 cut(s)	390
BslFI	GGGAC	1 cut(s)	1319
BslI	CCNNNNNNNGG	3 cut(s)	599, 600, 1576
BsmAI	GTCTC	6 cut(s)	58, 238, 882, 926, 1419, 1791
BsmBI	CGTCTC	2 cut(s)	58, 238
BsmFI	GGGAC	1 cut(s)	1319
BsnI	GGCC	1 cut(s)	5
Bsp1286I	GDGCHC	4 cut(s)	75, 628, 828, 1214
Bsp143I	GATC	5 cut(s)	106, 313, 337, 354, 1776
Bsp68I	TCGCGA	1 cut(s)	69
BspACI	CCGC	5 cut(s)	144, 298, 1181, 1215, 1691
BspANI	GGCC	1 cut(s)	5
BspCNI	CTCAG	4 cut(s)	898, 1528, 1690, 1714
BspFNI	CGCG	1 cut(s)	69
BspHI	TCATGA	1 cut(s)	1072
BspLI	GGNNCC	3 cut(s)	424, 625, 1695
BspMI	ACCTGC	1 cut(s)	907
BspPI	GGATC	2 cut(s)	114, 321
BspT107I	GGYRCC	1 cut(s)	1693
BsrI	ACTGG	2 cut(s)	628, 733
BssECI	CCNNGG	4 cut(s)	561, 815, 1205, 1337
BssMI	GATC	5 cut(s)	106, 313, 337, 354, 1776
BssNI	GRCGYC	3 cut(s)	198, 1438, 1694
BssT1I	CCWWGG	3 cut(s)	815, 1205, 1337
Bst2UI	CCWGG	1 cut(s)	562
Bst4CI	ACNGT	2 cut(s)	323, 1106
Bst6I	CTCTTC	5 cut(s)	172, 440, 1809, 1884, 1980
BstACI	GRCGYC	3 cut(s)	198, 1438, 1694
BstAPI	GCANNNNNTGC	2 cut(s)	866, 1302
BstC8I	GCNNGC	5 cut(s)	7, 71, 531, 741, 995
BstDEI	CTNAG	6 cut(s)	885, 1094, 1536, 1698, 1722, 2122
BstF5I	GGATG	7 cut(s)	210, 615, 1059, 1273, 1585, 1882, 2056
BstFNI	CGCG	1 cut(s)	69
BstH2I	RGCGCY	1 cut(s)	1697
BstHHI	GCGC	4 cut(s)	550, 684, 1149, 1696
BstKTI	GATC	5 cut(s)	109, 316, 340, 357, 1779
BstMAI	GTCTC	6 cut(s)	58, 238, 882, 926, 1419, 1791
BstMBI	GATC	5 cut(s)	106, 313, 337, 354, 1776
BstMWI	GCNNNNNNNGC	7 cut(s)	143, 152, 665, 745, 866, 1302, 1317
BstNI	CCWGG	1 cut(s)	562
BstNSI	RCATGY	4 cut(s)	1031, 1359, 1563, 1749
BstSCI	CCNGG	1 cut(s)	560
BstSLI	GKGCMC	1 cut(s)	828
BstUI	CGCG	1 cut(s)	69
BstV1I	GCAGC	5 cut(s)	21, 646, 760, 977, 1165
BstV2I	GAAGAC	3 cut(s)	391, 1845, 2040
BstX2I	RGATCY	3 cut(s)	106, 313, 1776
BstXI	CCANNNNNNTGG	1 cut(s)	1715
BstYI	RGATCY	3 cut(s)	106, 313, 1776
BsuI	GTATCC	1 cut(s)	1212
BsuRI	GGCC	1 cut(s)	5
BtrI	CACGTC	2 cut(s)	232, 1636
BtsCI	GGATG	7 cut(s)	210, 615, 1059, 1273, 1585, 1882, 2056
BtsI	GCAGTG	1 cut(s)	768
BtsIMutI	CAGTG	3 cut(s)	768, 1448, 1720
BtuMI	TCGCGA	1 cut(s)	69
BveI	ACCTGC	1 cut(s)	907
Cac8I	GCNNGC	5 cut(s)	7, 71, 531, 741, 995
CciI	TCATGA	1 cut(s)	1072
CfoI	GCGC	4 cut(s)	550, 684, 1149, 1696
Cfr13I	GGNCC	1 cut(s)	207
CseI	GACGC	3 cut(s)	206, 1309, 1427
Csp6I	GTAC	1 cut(s)	1597
CspCI	CAANNNNNGTGG	2 cut(s)	1478, 1513
CviQI	GTAC	1 cut(s)	1597
DdeI	CTNAG	6 cut(s)	885, 1094, 1536, 1698, 1722, 2122
DinI	GGCGCC	1 cut(s)	1695
DpnI	GATC	5 cut(s)	108, 315, 339, 356, 1778
DpnII	GATC	5 cut(s)	106, 313, 337, 354, 1776
DraI	TTTAAA	1 cut(s)	853
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	5 cut(s)	172, 440, 1809, 1884, 1980
EarI	CTCTTC	5 cut(s)	172, 440, 1809, 1884, 1980
Ecl136II	GAGCTC	1 cut(s)	73
Eco130I	CCWWGG	3 cut(s)	815, 1205, 1337
Eco24I	GRGCYC	2 cut(s)	75, 628
Eco47I	GGWCC	1 cut(s)	207
Eco53kI	GAGCTC	1 cut(s)	73
Eco57I	CTGAAG	3 cut(s)	1497, 1932, 2052
EcoICRI	GAGCTC	1 cut(s)	73
EcoRII	CCWGG	1 cut(s)	560
EcoT14I	CCWWGG	3 cut(s)	815, 1205, 1337
EcoT22I	ATGCAT	1 cut(s)	1298
EcoT38I	GRGCYC	2 cut(s)	75, 628
EgeI	GGCGCC	1 cut(s)	1695
EheI	GGCGCC	1 cut(s)	1695
ErhI	CCWWGG	3 cut(s)	815, 1205, 1337
Esp3I	CGTCTC	2 cut(s)	58, 238
FaqI	GGGAC	1 cut(s)	1319
FauNDI	CATATG	1 cut(s)	1461
FbaI	TGATCA	1 cut(s)	337
FblI	GTMKAC	1 cut(s)	440
Fnu4HI	GCNGC	7 cut(s)	10, 144, 660, 749, 991, 1179, 1692
FokI	GGATG	7 cut(s)	197, 622, 1066, 1280, 1592, 1889, 2063
FriOI	GRGCYC	2 cut(s)	75, 628
Fsp4HI	GCNGC	7 cut(s)	10, 144, 660, 749, 991, 1179, 1692
FspBI	CTAG	2 cut(s)	92, 1062
GlaI	GCGC	4 cut(s)	549, 683, 1148, 1695
GluI	GCNGC	7 cut(s)	10, 144, 660, 749, 991, 1179, 1692
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	1 cut(s)	544
HaeII	RGCGCY	1 cut(s)	1697
HaeIII	GGCC	1 cut(s)	5
HapII	CCGG	1 cut(s)	390
HgaI	GACGC	3 cut(s)	206, 1309, 1427
HhaI	GCGC	4 cut(s)	550, 684, 1149, 1696
Hin1I	GRCGYC	3 cut(s)	198, 1438, 1694
Hin6I	GCGC	4 cut(s)	548, 682, 1147, 1694
HinP1I	GCGC	4 cut(s)	548, 682, 1147, 1694
HincII	GTYRAC	2 cut(s)	441, 1102
HindII	GTYRAC	2 cut(s)	441, 1102
HindIII	AAGCTT	1 cut(s)	1164
HpaII	CCGG	1 cut(s)	390
HphI	GGTGA	6 cut(s)	9, 505, 679, 1048, 1835, 2024
Hpy166II	GTNNAC	3 cut(s)	441, 801, 1102
Hpy8I	GTNNAC	3 cut(s)	441, 801, 1102
Hpy99I	CGWCG	8 cut(s)	32, 38, 41, 69, 200, 327, 442, 445
HpyAV	CCTTC	8 cut(s)	413, 421, 641, 797, 1472, 1546, 1813, 2003
HpyCH4III	ACNGT	2 cut(s)	323, 1106
HpyCH4IV	ACGT	6 cut(s)	39, 64, 231, 805, 1231, 1635
HpyF10VI	GCNNNNNNNGC	7 cut(s)	143, 152, 665, 745, 866, 1302, 1317
HpyF3I	CTNAG	6 cut(s)	885, 1094, 1536, 1698, 1722, 2122
HpySE526I	ACGT	6 cut(s)	39, 64, 231, 805, 1231, 1635
Hsp92I	GRCGYC	3 cut(s)	198, 1438, 1694
HspAI	GCGC	4 cut(s)	548, 682, 1147, 1694
KasI	GGCGCC	1 cut(s)	1693
Ksp22I	TGATCA	1 cut(s)	337
Kzo9I	GATC	5 cut(s)	106, 313, 337, 354, 1776
LmnI	GCTCC	6 cut(s)	265, 428, 623, 1217, 1532, 1718
Lsp1109I	GCAGC	5 cut(s)	21, 646, 760, 977, 1165
LweI	GCATC	5 cut(s)	693, 856, 1006, 1055, 1909
MaeI	CTAG	2 cut(s)	92, 1062
MaeII	ACGT	6 cut(s)	39, 64, 231, 805, 1231, 1635
MaeIII	GTNAC	4 cut(s)	15, 724, 1636, 2090
MalI	GATC	5 cut(s)	108, 315, 339, 356, 1778
MboI	GATC	5 cut(s)	106, 313, 337, 354, 1776
MfeI	CAATTG	1 cut(s)	1324
MflI	RGATCY	3 cut(s)	106, 313, 1776
MhlI	GDGCHC	4 cut(s)	75, 628, 828, 1214
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1694
MlyI	GAGTC	6 cut(s)	104, 395, 551, 1652, 2087, 2108
MmeI	TCCRAC	5 cut(s)	123, 148, 184, 305, 490
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1298
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	8 cut(s)	117, 654, 780, 840, 852, 1157, 1220, 2131
MslI	CAYNNNNRTG	3 cut(s)	260, 1713, 1750
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	1 cut(s)	390
MspR9I	CCNGG	1 cut(s)	562
MunI	CAATTG	1 cut(s)	1324
MvaI	CCWGG	1 cut(s)	562
MvnI	CGCG	1 cut(s)	69
MwoI	GCNNNNNNNGC	7 cut(s)	143, 152, 665, 745, 866, 1302, 1317
NarI	GGCGCC	1 cut(s)	1694
NdeI	CATATG	1 cut(s)	1461
NdeII	GATC	5 cut(s)	106, 313, 337, 354, 1776
NlaIV	GGNNCC	3 cut(s)	424, 625, 1695
NmuCI	GTSAC	3 cut(s)	15, 1636, 2090
NruI	TCGCGA	1 cut(s)	69
NsiI	ATGCAT	1 cut(s)	1298
NspI	RCATGY	4 cut(s)	1031, 1359, 1563, 1749
PagI	TCATGA	1 cut(s)	1072
PciI	ACATGT	3 cut(s)	1027, 1559, 1745
PcsI	WCGNNNNNNNCGW	4 cut(s)	33, 36, 54, 437
PfeI	GAWTC	8 cut(s)	86, 328, 364, 1057, 1378, 1429, 1625, 1649
PflFI	GACNNNGTC	1 cut(s)	1642
PkrI	GCNGC	7 cut(s)	11, 145, 661, 750, 992, 1180, 1693
PleI	GAGTC	6 cut(s)	103, 394, 551, 1651, 2087, 2108
PluTI	GGCGCC	1 cut(s)	1697
PpsI	GAGTC	6 cut(s)	103, 394, 551, 1651, 2087, 2108
PscI	ACATGT	3 cut(s)	1027, 1559, 1745
Psp124BI	GAGCTC	1 cut(s)	75
Psp6I	CCWGG	1 cut(s)	560
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	1 cut(s)	560
PspN4I	GGNNCC	3 cut(s)	424, 625, 1695
PspPI	GGNCC	1 cut(s)	207
PsuI	RGATCY	3 cut(s)	106, 313, 1776
PsyI	GACNNNGTC	1 cut(s)	1642
RruI	TCGCGA	1 cut(s)	69
RsaI	GTAC	1 cut(s)	1598
RsaNI	GTAC	1 cut(s)	1597
RseI	CAYNNNNRTG	3 cut(s)	260, 1713, 1750
SacI	GAGCTC	1 cut(s)	75
SalI	GTCGAC	1 cut(s)	439
SaqAI	TTAA	8 cut(s)	117, 654, 780, 840, 852, 1157, 1220, 2131
SatI	GCNGC	7 cut(s)	10, 144, 660, 749, 991, 1179, 1692
Sau3AI	GATC	5 cut(s)	106, 313, 337, 354, 1776
Sau96I	GGNCC	1 cut(s)	207
SchI	GAGTC	6 cut(s)	104, 395, 551, 1652, 2087, 2108
ScrFI	CCNGG	1 cut(s)	562
SduI	GDGCHC	4 cut(s)	75, 628, 828, 1214
SfaNI	GCATC	5 cut(s)	693, 856, 1006, 1055, 1909
SfoI	GGCGCC	1 cut(s)	1695
SgrDI	CGTCGACG	1 cut(s)	439
SinI	GGWCC	1 cut(s)	207
SmiMI	CAYNNNNRTG	3 cut(s)	260, 1713, 1750
SmlI	CTYRAG	3 cut(s)	239, 1261, 1423
SmoI	CTYRAG	3 cut(s)	239, 1261, 1423
SsiI	CCGC	5 cut(s)	144, 298, 1181, 1215, 1691
SspDI	GGCGCC	1 cut(s)	1693
SspI	AATATT	2 cut(s)	1591, 1902
SspMI	CTAG	2 cut(s)	92, 1062
SstI	GAGCTC	1 cut(s)	75
StyD4I	CCNGG	1 cut(s)	560
StyI	CCWWGG	3 cut(s)	815, 1205, 1337
TaaI	ACNGT	2 cut(s)	323, 1106
TaiI	ACGT	6 cut(s)	42, 67, 234, 808, 1234, 1638
TaqI	TCGA	6 cut(s)	190, 291, 440, 453, 579, 1734
TaqII	GACCGA	1 cut(s)	297
TauI	GCSGC	2 cut(s)	146, 1694
TfiI	GAWTC	8 cut(s)	86, 328, 364, 1057, 1378, 1429, 1625, 1649
Tru1I	TTAA	8 cut(s)	117, 654, 780, 840, 852, 1157, 1220, 2131
Tru9I	TTAA	8 cut(s)	117, 654, 780, 840, 852, 1157, 1220, 2131
TscAI	CASTG	3 cut(s)	768, 1448, 1720
TseFI	GTSAC	3 cut(s)	15, 1636, 2090
TseI	GCWGC	5 cut(s)	9, 659, 748, 990, 1178
Tsp45I	GTSAC	3 cut(s)	15, 1636, 2090
TspRI	CASTG	3 cut(s)	768, 1448, 1720
Tth111I	GACNNNGTC	1 cut(s)	1642
VpaK11BI	GGWCC	1 cut(s)	207
XapI	RAATTY	4 cut(s)	703, 842, 1115, 1947
XceI	RCATGY	4 cut(s)	1031, 1359, 1563, 1749
XcmI	CCANNNNNNNNNTGG	2 cut(s)	375, 568
XmiI	GTMKAC	1 cut(s)	440
XspI	CTAG	2 cut(s)	92, 1062
Zsp2I	ATGCAT	1 cut(s)	1298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.