Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Forward (+)

6509759 .. 6514028

Gene Structure 4270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G094200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGATGATCGTACTGACCCAGACGACCTCGACACCATTCTCTCCGAGCAACGCAGAGACCTTATGGCCGCCAAAACCCTAGACTCCGACCTGGACATGGCCTTCAAGCTCCAAATGCAGGAGGCCATGGCCGCCTCTCTCGCTCTCAATCCCTCGTTGGCCTCGGGTTCGAGTTCGCGCAACTCTCCGCCTCCTTCGCCGCCTCACGACGCCTTGAACGACGCCATTTTAGACCTCGCCGCCGCGCTTATGCTCGAGGACGTCGAGCGATTCGCGCAGGAGTGGGAGGACCACGAGCGCACCGTTTCGGAGATGATGAAGATGAAGGAAGATCTCAACCGTCGAATTCACGATCAGAAGTTCGCCGCCGACCTCCGCGACGTGCCTGAGGACTACTGGGACAAGCACGGCGACTATTACGAGCGTCCGTACTGTGCGGACGAATCGTCTTCGTCATCGTCGACTAAAGCTGCAGCGGTGGAGACTGAGAATTTGAGGTTGTATTGCAAAGGTTTGGTGAGCGAGGAGAGGGTTAGGGATATGAAGGTGGTGGTGGCTGGGGTTGGTATCGCGATTTGTGACCCGAGAGACAATCTGATATTCGAGGCGAGGAAGAATCTGGAGGCGGTGGTTGATGGTGTGGTGCTGAGCAATGAGGCTTCGGAGCTTGAGGCCATCATTGAGGGGCTTAACAAAGCTCTCACCATGGACTTGAAATCTGTGACCTTTTACTGTGATGACTACATGCTTTACCAATATGTCACAAACAGAGTGCGTCCTGGAAACAGCAAGGTTGCAACATTAGTCAATCAAGTGGCTCTTCTACAAAGAAAATTTGAATATTGCAGCCCTTCTCTTGTAGCACATACTGACATTAAGTTTGCACTTAAAGTTGCAAGAGAGGCTATAGTTTCTCAGATCACCTGGCGTGCAGACTCTAGCAATGGAAAGAGTTTGAAGGAGACTTGTGTAATTTGCTTTGAAGAAACTGATGTTGCAGAAATTTTTTCAATCGATGGCTGTCTACACAGGTATTGCTGTTCTTGTATGAAACAGCATGTGGAAGTAAAGTTTCTTAATGGGATGGGGGCAGAGTGCCCTCATGAAGGCTGTAAAAATGAGGTGAATATTGATAGCTGTGCAGAATTCTTGGCACCTAAACTAGTTGAGGCCATAAGCCAAAGAATCAAGGAATTTTCTATTCCGGTTACAGACAAAGTTTATTGCCCAAATCCCAGGTGTTCTGCATTAATGTCTAAAAAGGAGGTCTTAGAATATACCAAAACTACTTTTGTCCATGCTGAGCAAACTGGAGCCAGGAGATGCATGAAATGTCATTACTATTTTTGTATCAATTGCAAGGTCCCTTGGCACTTCAATATGACCTGCTATGATTATAAAAGATCACATCCCTATCCCCACCCAGAAGACCAATTGCTCAACTCGCTGGCTACAAAGAAACTCTGGCGTCAGTGCGTAAAGTGCAGCCATATGGTTGAACTTGCCGAAGGTTGTTATCACATAACTTGCAGATGTGGTTATGAGTTTTGTTATACTTGTGGAGCTGAGTGGAAGAACAAGAAAGCAACATGTTCCTGCCGAATCTGGGATGAGCGTAACATTATACGCGAACAGCCACAACAAGCACAGCCCATTATACGCGAACAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

558

Amino Acids

63.44

Weight (kDa)

5.46

Isoelectric Point (pI)

45.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1398
AatII	GACGTC	1 cut(s)	264
Acc36I	ACCTGC	1 cut(s)	1394
AccB1I	GGYRCC	1 cut(s)	1153
AccI	GTMKAC	2 cut(s)	461, 1024
AccII	CGCG	7 cut(s)	178, 245, 275, 378, 572, 1629, 1662
AcoI	YGGCCR	2 cut(s)	66, 129
AcsI	RAATTY	6 cut(s)	345, 490, 833, 1002, 1145, 1193
AcyI	GRCGYC	4 cut(s)	210, 222, 261, 1468
AfaI	GTAC	2 cut(s)	13, 431
AfiI	CCNNNNNNNGG	4 cut(s)	97, 118, 1106, 1606
AflIII	ACRYGT	1 cut(s)	1589
AgsI	TTSAA	9 cut(s)	106, 217, 715, 839, 958, 983, 1011, 1378, 1499
AhdI	GACNNNNNGTC	1 cut(s)	445
AhlI	ACTAGT	1 cut(s)	1162
AjiI	CACGTC	1 cut(s)	382
AjnI	CCWGG	5 cut(s)	90, 778, 923, 1235, 1316
AluBI	AGCT	6 cut(s)	109, 470, 667, 698, 1137, 1565
AluI	AGCT	6 cut(s)	109, 470, 667, 698, 1137, 1565
Alw26I	GTCTC	4 cut(s)	51, 476, 582, 956
Ama87I	CYCGRG	3 cut(s)	163, 254, 583
AoxI	GGCC	7 cut(s)	66, 99, 123, 129, 159, 672, 1170
ApeKI	GCWGC	4 cut(s)	470, 473, 846, 1485
ApoI	RAATTY	6 cut(s)	345, 490, 833, 1002, 1145, 1193
ArsI	GACNNNNNNTTYG	4 cut(s)	475, 507, 863, 895
AseI	ATTAAT	1 cut(s)	1250
AspLEI	GCGC	4 cut(s)	180, 247, 277, 300
AspS9I	GGNCC	2 cut(s)	289, 1363
AsuHPI	GGTGA	4 cut(s)	529, 694, 913, 1135
AvaI	CYCGRG	3 cut(s)	163, 254, 583
AvaII	GGWCC	2 cut(s)	289, 1363
AxyI	CCTNAGG	1 cut(s)	387
BaeGI	GKGCMC	1 cut(s)	1100
BanI	GGYRCC	1 cut(s)	1153
BauI	CACGAG	1 cut(s)	293
BbsI	GAAGAC	2 cut(s)	441, 1434
BbvI	GCAGC	4 cut(s)	457, 485, 858, 1497
BccI	CCATC	4 cut(s)	629, 683, 1010, 1078
BceAI	ACGGC	1 cut(s)	424
BciT130I	CCWGG	5 cut(s)	92, 780, 925, 1237, 1318
BcoDI	GTCTC	4 cut(s)	51, 476, 582, 956
BcuI	ACTAGT	1 cut(s)	1162
BfaI	CTAG	3 cut(s)	80, 939, 1163
BfmI	CTRYAG	2 cut(s)	471, 906
BfuAI	ACCTGC	1 cut(s)	1394
BglII	AGATCT	1 cut(s)	331
BlpI	GCTNAGC	2 cut(s)	647, 1302
Bme1390I	CCNGG	5 cut(s)	92, 780, 925, 1237, 1318
Bme18I	GGWCC	2 cut(s)	289, 1363
BmeRI	GACNNNNNGTC	1 cut(s)	445
BmeT110I	CYCGRG	3 cut(s)	163, 254, 583
BmgBI	CACGTC	1 cut(s)	382
BmgT120I	GGNCC	2 cut(s)	289, 1363
BmiI	GGNNCC	3 cut(s)	1155, 1315, 1365
BmrFI	CCNGG	5 cut(s)	92, 780, 925, 1237, 1318
BmrI	ACTGGG	1 cut(s)	406
BmsI	GCATC	1 cut(s)	1313
BmuI	ACTGGG	1 cut(s)	406
BpiI	GAAGAC	2 cut(s)	441, 1434
BpmI	CTGGAG	2 cut(s)	641, 1332
Bpu1102I	GCTNAGC	2 cut(s)	647, 1302
BpuEI	CTTGAG	1 cut(s)	689
Bsa29I	ATCGAT	1 cut(s)	1014
BsaHI	GRCGYC	4 cut(s)	210, 222, 261, 1468
BsaI	GGTCTC	1 cut(s)	51
BsaJI	CCNNGG	5 cut(s)	126, 162, 705, 1235, 1367
BsaWI	WCCGGW	1 cut(s)	1204
Bsc4I	CCNNNNNNNGG	4 cut(s)	97, 118, 1106, 1606
Bse1I	ACTGG	2 cut(s)	401, 1315
Bse21I	CCTNAGG	1 cut(s)	387
Bse3DI	GCAATG	2 cut(s)	658, 949
BseBI	CCWGG	5 cut(s)	92, 780, 925, 1237, 1318
BseCI	ATCGAT	1 cut(s)	1014
BseDI	CCNNGG	5 cut(s)	126, 162, 705, 1235, 1367
BseGI	GGATG	4 cut(s)	10, 1089, 1408, 1615
BseLI	CCNNNNNNNGG	4 cut(s)	97, 118, 1106, 1606
BseMI	GCAATG	2 cut(s)	658, 949
BseMII	CTCAG	6 cut(s)	378, 477, 638, 929, 1293, 1557
BseNI	ACTGG	2 cut(s)	401, 1315
BseRI	GAGGAG	1 cut(s)	539
BseSI	GKGCMC	1 cut(s)	1100
BseXI	GCAGC	4 cut(s)	457, 485, 858, 1497
BseYI	CCCAGC	1 cut(s)	557
BsgI	GTGCAG	3 cut(s)	951, 1161, 1504
Bsh1236I	CGCG	7 cut(s)	178, 245, 275, 378, 572, 1629, 1662
BshFI	GGCC	7 cut(s)	68, 101, 125, 131, 161, 674, 1172
BshNI	GGYRCC	1 cut(s)	1153
BshVI	ATCGAT	1 cut(s)	1014
BsiHKCI	CYCGRG	3 cut(s)	163, 254, 583
BsiSI	CCGG	1 cut(s)	1205
BslFI	GGGAC	2 cut(s)	413, 1349
BslI	CCNNNNNNNGG	4 cut(s)	97, 118, 1106, 1606
BsmAI	GTCTC	4 cut(s)	51, 476, 582, 956
BsmFI	GGGAC	2 cut(s)	413, 1349
BsnI	GGCC	7 cut(s)	68, 101, 125, 131, 161, 674, 1172
Bso31I	GGTCTC	1 cut(s)	51
BsoBI	CYCGRG	3 cut(s)	163, 254, 583
Bsp1286I	GDGCHC	1 cut(s)	1100
Bsp143I	GATC	5 cut(s)	7, 331, 352, 918, 1403
Bsp1720I	GCTNAGC	2 cut(s)	647, 1302
Bsp19I	CCATGG	2 cut(s)	126, 705
Bsp68I	TCGCGA	1 cut(s)	572
BspANI	GGCC	7 cut(s)	68, 101, 125, 131, 161, 674, 1172
BspCNI	CTCAG	6 cut(s)	379, 478, 639, 928, 1294, 1558
BspDI	ATCGAT	1 cut(s)	1014
BspFNI	CGCG	7 cut(s)	178, 245, 275, 378, 572, 1629, 1662
BspHI	TCATGA	1 cut(s)	1102
BspLI	GGNNCC	3 cut(s)	1155, 1315, 1365
BspMAI	CTGCAG	1 cut(s)	475
BspMI	ACCTGC	1 cut(s)	1394
BspQI	GCTCTTC	1 cut(s)	825
BspT107I	GGYRCC	1 cut(s)	1153
BspTNI	GGTCTC	1 cut(s)	51
BsrDI	GCAATG	2 cut(s)	658, 949
BsrI	ACTGG	2 cut(s)	401, 1315
BssECI	CCNNGG	5 cut(s)	126, 162, 705, 1235, 1367
BssMI	GATC	5 cut(s)	7, 331, 352, 918, 1403
BssNI	GRCGYC	4 cut(s)	210, 222, 261, 1468
BssSI	CACGAG	1 cut(s)	293
BssT1I	CCWWGG	3 cut(s)	126, 705, 1367
Bst2BI	CACGAG	1 cut(s)	293
Bst2UI	CCWGG	5 cut(s)	92, 780, 925, 1237, 1318
Bst4CI	ACNGT	4 cut(s)	304, 341, 434, 734
Bst6I	CTCTTC	1 cut(s)	825
BstACI	GRCGYC	4 cut(s)	210, 222, 261, 1468
BstC8I	GCNNGC	2 cut(s)	930, 1449
BstDEI	CTNAG	7 cut(s)	387, 486, 647, 915, 1270, 1302, 1566
BstDSI	CCRYGG	2 cut(s)	126, 705
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	4 cut(s)	10, 1089, 1408, 1615
BstFNI	CGCG	7 cut(s)	178, 245, 275, 378, 572, 1629, 1662
BstHHI	GCGC	4 cut(s)	180, 247, 277, 300
BstKTI	GATC	5 cut(s)	10, 334, 355, 921, 1406
BstMAI	GTCTC	4 cut(s)	51, 476, 582, 956
BstMBI	GATC	5 cut(s)	7, 331, 352, 918, 1403
BstMWI	GCNNNNNNNGC	8 cut(s)	115, 131, 140, 196, 274, 902, 1444, 1482
BstNI	CCWGG	5 cut(s)	92, 780, 925, 1237, 1318
BstNSI	RCATGY	3 cut(s)	748, 1061, 1593
BstSCI	CCNGG	5 cut(s)	90, 778, 923, 1235, 1316
BstSFI	CTRYAG	2 cut(s)	471, 906
BstSLI	GKGCMC	1 cut(s)	1100
BstUI	CGCG	7 cut(s)	178, 245, 275, 378, 572, 1629, 1662
BstV1I	GCAGC	4 cut(s)	457, 485, 858, 1497
BstV2I	GAAGAC	2 cut(s)	441, 1434
BstX2I	RGATCY	1 cut(s)	331
BstYI	RGATCY	1 cut(s)	331
Bsu15I	ATCGAT	1 cut(s)	1014
Bsu36I	CCTNAGG	1 cut(s)	387
BsuRI	GGCC	7 cut(s)	68, 101, 125, 131, 161, 674, 1172
BsuTUI	ATCGAT	1 cut(s)	1014
BtgI	CCRYGG	2 cut(s)	126, 705
BtrI	CACGTC	1 cut(s)	382
BtsCI	GGATG	4 cut(s)	10, 1089, 1408, 1615
BtsIMutI	CAGTG	1 cut(s)	1478
BtuMI	TCGCGA	1 cut(s)	572
BveI	ACCTGC	1 cut(s)	1394
Cac8I	GCNNGC	2 cut(s)	930, 1449
CciI	TCATGA	1 cut(s)	1102
CfoI	GCGC	4 cut(s)	180, 247, 277, 300
Cfr13I	GGNCC	2 cut(s)	289, 1363
ClaI	ATCGAT	1 cut(s)	1014
CseI	GACGC	5 cut(s)	218, 230, 413, 764, 1457
Csp6I	GTAC	2 cut(s)	12, 430
CviQI	GTAC	2 cut(s)	12, 430
DdeI	CTNAG	7 cut(s)	387, 486, 647, 915, 1270, 1302, 1566
DpnI	GATC	5 cut(s)	9, 333, 354, 920, 1405
DpnII	GATC	5 cut(s)	7, 331, 352, 918, 1403
DriI	GACNNNNNGTC	1 cut(s)	445
EaeI	YGGCCR	2 cut(s)	66, 129
Eam1104I	CTCTTC	1 cut(s)	825
Eam1105I	GACNNNNNGTC	1 cut(s)	445
EarI	CTCTTC	1 cut(s)	825
EciI	GGCGGA	1 cut(s)	177
Eco130I	CCWWGG	3 cut(s)	126, 705, 1367
Eco31I	GGTCTC	1 cut(s)	51
Eco47I	GGWCC	2 cut(s)	289, 1363
Eco81I	CCTNAGG	1 cut(s)	387
Eco88I	CYCGRG	3 cut(s)	163, 254, 583
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoO109I	RGGNCCY	1 cut(s)	1363
EcoRI	GAATTC	2 cut(s)	345, 1145
EcoRII	CCWGG	5 cut(s)	90, 778, 923, 1235, 1316
EcoT14I	CCWWGG	3 cut(s)	126, 705, 1367
EcoT22I	ATGCAT	1 cut(s)	1328
ErhI	CCWWGG	3 cut(s)	126, 705, 1367
FalI	AAGNNNNNCTT	4 cut(s)	804, 836, 1253, 1285
FaqI	GGGAC	2 cut(s)	413, 1349
FauNDI	CATATG	1 cut(s)	1491
FblI	GTMKAC	2 cut(s)	461, 1024
FokI	GGATG	4 cut(s)	17, 1096, 1395, 1622
FspBI	CTAG	3 cut(s)	80, 939, 1163
GlaI	GCGC	4 cut(s)	179, 246, 276, 299
GsaI	CCCAGC	1 cut(s)	561
GsuI	CTGGAG	2 cut(s)	641, 1332
HaeIII	GGCC	7 cut(s)	68, 101, 125, 131, 161, 674, 1172
HapII	CCGG	1 cut(s)	1205
HgaI	GACGC	5 cut(s)	218, 230, 413, 764, 1457
HhaI	GCGC	4 cut(s)	180, 247, 277, 300
Hin1I	GRCGYC	4 cut(s)	210, 222, 261, 1468
Hin6I	GCGC	4 cut(s)	178, 245, 275, 298
HinP1I	GCGC	4 cut(s)	178, 245, 275, 298
HincII	GTYRAC	1 cut(s)	462
HindII	GTYRAC	1 cut(s)	462
HinfI	GANTC	7 cut(s)	83, 270, 443, 616, 935, 1185, 1602
HpaII	CCGG	1 cut(s)	1205
HphI	GGTGA	4 cut(s)	529, 694, 913, 1135
Hpy166II	GTNNAC	2 cut(s)	462, 1025
Hpy188I	TCNGA	7 cut(s)	46, 88, 310, 357, 597, 664, 918
Hpy188III	TCNNGA	5 cut(s)	206, 350, 571, 620, 1103
Hpy8I	GTNNAC	2 cut(s)	462, 1025
Hpy99I	CGWCG	6 cut(s)	212, 224, 266, 345, 383, 463
HpyAV	CCTTC	8 cut(s)	112, 204, 319, 538, 861, 952, 1100, 1502
HpyCH4III	ACNGT	4 cut(s)	304, 341, 434, 734
HpyCH4IV	ACGT	2 cut(s)	261, 381
HpyF10VI	GCNNNNNNNGC	8 cut(s)	115, 131, 140, 196, 274, 902, 1444, 1482
HpyF3I	CTNAG	7 cut(s)	387, 486, 647, 915, 1270, 1302, 1566
HpySE526I	ACGT	2 cut(s)	261, 381
Hsp92I	GRCGYC	4 cut(s)	210, 222, 261, 1468
HspAI	GCGC	4 cut(s)	178, 245, 275, 298
Kzo9I	GATC	5 cut(s)	7, 331, 352, 918, 1403
LguI	GCTCTTC	1 cut(s)	825
LmnI	GCTCC	4 cut(s)	114, 664, 1313, 1562
Lsp1109I	GCAGC	4 cut(s)	457, 485, 858, 1497
LweI	GCATC	1 cut(s)	1313
MaeI	CTAG	3 cut(s)	80, 939, 1163
MaeII	ACGT	2 cut(s)	261, 381
MaeIII	GTNAC	5 cut(s)	578, 721, 760, 1207, 1616
MalI	GATC	5 cut(s)	9, 333, 354, 920, 1405
MboI	GATC	5 cut(s)	7, 331, 352, 918, 1403
MboII	GAAGA	8 cut(s)	331, 341, 441, 625, 812, 995, 1439, 1585
MfeI	CAATTG	2 cut(s)	1354, 1433
MflI	RGATCY	1 cut(s)	331
MhlI	GDGCHC	1 cut(s)	1100
MluCI	AATT	9 cut(s)	345, 490, 833, 972, 1002, 1145, 1193, 1354, 1433
MlyI	GAGTC	2 cut(s)	77, 929
MmeI	TCCRAC	1 cut(s)	111
Mph1103I	ATGCAT	1 cut(s)	1328
MseI	TTAA	5 cut(s)	690, 876, 888, 1077, 1250
MspA1I	CMGCKG	1 cut(s)	476
MspI	CCGG	1 cut(s)	1205
MspR9I	CCNGG	5 cut(s)	92, 780, 925, 1237, 1318
MunI	CAATTG	2 cut(s)	1354, 1433
MvaI	CCWGG	5 cut(s)	92, 780, 925, 1237, 1318
MvnI	CGCG	7 cut(s)	178, 245, 275, 378, 572, 1629, 1662
MwoI	GCNNNNNNNGC	8 cut(s)	115, 131, 140, 196, 274, 902, 1444, 1482
NcoI	CCATGG	2 cut(s)	126, 705
NdeI	CATATG	1 cut(s)	1491
NdeII	GATC	5 cut(s)	7, 331, 352, 918, 1403
NlaIV	GGNNCC	3 cut(s)	1155, 1315, 1365
NmuCI	GTSAC	3 cut(s)	578, 721, 760
NruI	TCGCGA	1 cut(s)	572
NsiI	ATGCAT	1 cut(s)	1328
NspI	RCATGY	3 cut(s)	748, 1061, 1593
PaeR7I	CTCGAG	1 cut(s)	254
PagI	TCATGA	1 cut(s)	1102
PciI	ACATGT	1 cut(s)	1589
PciSI	GCTCTTC	1 cut(s)	825
PcsI	WCGNNNNNNNCGW	4 cut(s)	216, 261, 300, 458
PfeI	GAWTC	5 cut(s)	270, 443, 616, 1185, 1602
PfoI	TCCNGGA	1 cut(s)	778
PleI	GAGTC	2 cut(s)	77, 929
PpsI	GAGTC	2 cut(s)	77, 929
PpuMI	RGGWCCY	1 cut(s)	1363
PscI	ACATGT	1 cut(s)	1589
PshBI	ATTAAT	1 cut(s)	1250
PsiI	TTATAA	1 cut(s)	1398
Psp5II	RGGWCCY	1 cut(s)	1363
Psp6I	CCWGG	5 cut(s)	90, 778, 923, 1235, 1316
PspFI	CCCAGC	1 cut(s)	557
PspGI	CCWGG	5 cut(s)	90, 778, 923, 1235, 1316
PspN4I	GGNNCC	3 cut(s)	1155, 1315, 1365
PspPI	GGNCC	2 cut(s)	289, 1363
PspPPI	RGGWCCY	1 cut(s)	1363
PspXI	VCTCGAGB	1 cut(s)	254
PstI	CTGCAG	1 cut(s)	475
PsuI	RGATCY	1 cut(s)	331
RruI	TCGCGA	1 cut(s)	572
RsaI	GTAC	2 cut(s)	13, 431
RsaNI	GTAC	2 cut(s)	12, 430
SalI	GTCGAC	1 cut(s)	460
SapI	GCTCTTC	1 cut(s)	825
SaqAI	TTAA	5 cut(s)	690, 876, 888, 1077, 1250
Sau3AI	GATC	5 cut(s)	7, 331, 352, 918, 1403
Sau96I	GGNCC	2 cut(s)	289, 1363
SchI	GAGTC	2 cut(s)	77, 929
ScrFI	CCNGG	5 cut(s)	92, 780, 925, 1237, 1318
SduI	GDGCHC	1 cut(s)	1100
SfaNI	GCATC	1 cut(s)	1313
SfcI	CTRYAG	2 cut(s)	471, 906
Sfr274I	CTCGAG	1 cut(s)	254
SinI	GGWCC	2 cut(s)	289, 1363
SlaI	CTCGAG	1 cut(s)	254
SmlI	CTYRAG	2 cut(s)	254, 668
SmoI	CTYRAG	2 cut(s)	254, 668
SpeI	ACTAGT	1 cut(s)	1162
Sse9I	AATT	9 cut(s)	345, 490, 833, 972, 1002, 1145, 1193, 1354, 1433
SspI	AATATT	2 cut(s)	842, 1129
SspMI	CTAG	3 cut(s)	80, 939, 1163
StyD4I	CCNGG	5 cut(s)	90, 778, 923, 1235, 1316
StyI	CCWWGG	3 cut(s)	126, 705, 1367
TaaI	ACNGT	4 cut(s)	304, 341, 434, 734
TaiI	ACGT	2 cut(s)	264, 384
TaqI	TCGA	8 cut(s)	30, 170, 255, 264, 343, 461, 603, 1014
TasI	AATT	9 cut(s)	345, 490, 833, 972, 1002, 1145, 1193, 1354, 1433
TauI	GCSGC	6 cut(s)	71, 134, 202, 242, 245, 368
TfiI	GAWTC	5 cut(s)	270, 443, 616, 1185, 1602
Tru1I	TTAA	5 cut(s)	690, 876, 888, 1077, 1250
Tru9I	TTAA	5 cut(s)	690, 876, 888, 1077, 1250
TscAI	CASTG	1 cut(s)	1478
TseFI	GTSAC	3 cut(s)	578, 721, 760
TseI	GCWGC	4 cut(s)	470, 473, 846, 1485
Tsp45I	GTSAC	3 cut(s)	578, 721, 760
TspDTI	ATGAA	6 cut(s)	332, 338, 557, 1064, 1119, 1343
TspGWI	ACGGA	1 cut(s)	417
TspRI	CASTG	1 cut(s)	1478
VpaK11BI	GGWCC	2 cut(s)	289, 1363
VspI	ATTAAT	1 cut(s)	1250
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	6 cut(s)	345, 490, 833, 1002, 1145, 1193
XceI	RCATGY	3 cut(s)	748, 1061, 1593
XhoI	CTCGAG	1 cut(s)	254
XmiI	GTMKAC	2 cut(s)	461, 1024
XspI	CTAG	3 cut(s)	80, 939, 1163
ZraI	GACGTC	1 cut(s)	262
Zsp2I	ATGCAT	1 cut(s)	1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.