Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Forward (+)

6552365 .. 6556181

Gene Structure 3817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G094500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGATGATCGTACTGACCCAGACGACCTCCACACCATTCTCTCCGAACAACGCAGAGACCTTATGGCCGCCAAAACTCTAGACTCCGACCTCGACATGGCCTTCAAGCTCCAAATGCAGGAGGCCATGTCCGCCTCTCTCGCTCTCAATCCCTCGTTGGCCTCGAGTTCGAGTTCGAGTTCGCGCAACTCTCCGCCTCCTTCGCCGCCCCACGACGCCATTTTAGACCTCGCCGCCACGCTCATGCTCGAGGACGTTGAGAGATTCGCGCAGGAGTGGGAGGACCACGAGCGCACCGTTTCGGAGATGATGAAGACGAAGGAAGATCTCAACCGTCGAATTCACGATCAGAAGTTCGCCGCCGACCTCTGCGACGTGCCAGACGACTACTGGGCCAAGCACGGCGACTATTACGAGCGTCCGTACTCTGCGGACGAATCGTCGTCGTCGTCGTCGACAAAAGCTGCGGCGGTGGAGACTGAGAATTTGAGGTTGTATTGCAAGGGTTTGGTGAGCGAGGAGAGGGTTAGGGATATGAAGGTGGTGGTTGCTGGGGCAGGTGTCGCGATTTGTGACCCGAGAGACAATCTGATATTCGAGGCGAGGAAGAATCTAGAGGCGGTGGCTGATGGTGTGGTGTTGAGCAATGAGGCTGCGGAGCTTGAGGCCATTATTGAAGGGCTTAACAAAGCTCTCACCTTGGACTTGAAATCTGTGACCTTTTACTGTGATGACTACATGCTTTACCAATATGTCACAAACAGAGTGCGTCCTGGAAACAGCAAGGTTGCAACATTAGTCAATCAAGTGGCTCTTCTACAAAGAAAATTTGAATATTGCAGCCCTTCTCTTGTAACACGTACTGACATTAAGTTTGCACTTAAAGTTGCTAGAGAGGCTATAGTTTCTCAGATCACCTGGCGTGCAGACTCTAGCAATGGAAAGAGTTTGAAGGAGACTTGTGTAATTTGCTTTGAAGAAACTGATGTTGCAGAAATGTTTTCAATCGATGGCTGTCTACACAGGTATTGCTGTTCCTGTATGAAACAGCATGTGGAAGTAAAGTTTCTTAATGGGATGGGGGCAGAGTGCCCTCATGAAGGCTGTAAAAATGAGGTGAATATTGATAGCTGTGCAAAATTCTTGGCACCTAAACTAGTTGAGGCCATAAGCCAAAGAATCAAGGAATCTTCTATTCCGGTTACAGACAAAGTTTATTGCCCAAATCCCAGGTGTTCTGCATTAATGTCTAAAAAGGAGGTCTTAGAATATACCAAAACTACTTTTGTCCGTGCTGAGCAAACTGGAGCCAGGAGATGCATGAAATGTCATTACTATTTTTGTATCAATTGCAAGGTCCCTTGGCACTTCAATATGACCTGCTATGATTATAAAAGATCACATCCCTATCCCCACCGAGAAGACCAATTGCTCAACTCGCTGGCTACAAAGAAACTCTGGCGTCAGTGCGTAAAGTGCAACCATATGGTTGAACTTGCCGAAGGTTGTTACCACATAACTTGCAGATGTGGTTATGAGTTTTGTTATACCTGTGGAGCTGAGTGGAAGAACAAGAAAGCAACATGTTCTTGCCGAATCTGGGATGAGCGTAACATTATACGCGAACAGCCACGACAAGCACAGCCCATTATACGCGAACAGCCACGACAGGCACAGCCCATTATACGCGAACAGCCACGACAGGCCCAGCCCATTATACGCGAACAGCCACGACAAGTACGACGACGACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

585

Amino Acids

66.79

Weight (kDa)

6.56

Isoelectric Point (pI)

48.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1392
AarI	CACCTGC	1 cut(s)	548
Acc36I	ACCTGC	2 cut(s)	548, 1388
AccB1I	GGYRCC	1 cut(s)	1147
AccI	GTMKAC	2 cut(s)	455, 1018
AccII	CGCG	7 cut(s)	184, 269, 566, 1623, 1656, 1689, 1722
AcoI	YGGCCR	1 cut(s)	66
AcsI	RAATTY	4 cut(s)	339, 484, 827, 1139
AcyI	GRCGYC	2 cut(s)	216, 1462
AfaI	GTAC	4 cut(s)	13, 425, 862, 1740
AfiI	CCNNNNNNNGG	4 cut(s)	97, 118, 1100, 1600
AflIII	ACRYGT	2 cut(s)	857, 1583
AgsI	TTSAA	9 cut(s)	106, 677, 709, 833, 952, 977, 1005, 1372, 1493
AhdI	GACNNNNNGTC	1 cut(s)	439
AhlI	ACTAGT	1 cut(s)	1156
AjiI	CACGTC	1 cut(s)	376
AjnI	CCWGG	4 cut(s)	772, 917, 1229, 1310
AluBI	AGCT	6 cut(s)	109, 464, 661, 692, 1131, 1559
AluI	AGCT	6 cut(s)	109, 464, 661, 692, 1131, 1559
Alw26I	GTCTC	4 cut(s)	51, 470, 576, 950
Ama87I	CYCGRG	3 cut(s)	163, 248, 577
AoxI	GGCC	8 cut(s)	66, 99, 123, 159, 393, 666, 1164, 1704
ApeKI	GCWGC	3 cut(s)	464, 653, 840
ApoI	RAATTY	4 cut(s)	339, 484, 827, 1139
ArsI	GACNNNNNNTTYG	4 cut(s)	469, 501, 857, 889
AseI	ATTAAT	1 cut(s)	1244
AspLEI	GCGC	3 cut(s)	186, 271, 294
AspS9I	GGNCC	4 cut(s)	283, 393, 1357, 1705
AsuHPI	GGTGA	4 cut(s)	523, 688, 907, 1129
AvaI	CYCGRG	3 cut(s)	163, 248, 577
AvaII	GGWCC	2 cut(s)	283, 1357
BaeGI	GKGCMC	1 cut(s)	1094
BanI	GGYRCC	1 cut(s)	1147
BauI	CACGAG	1 cut(s)	287
BbsI	GAAGAC	2 cut(s)	320, 1428
BbvI	GCAGC	3 cut(s)	451, 640, 852
BccI	CCATC	3 cut(s)	623, 1004, 1072
BceAI	ACGGC	1 cut(s)	418
BciT130I	CCWGG	4 cut(s)	774, 919, 1231, 1312
BcoDI	GTCTC	4 cut(s)	51, 470, 576, 950
BcuI	ACTAGT	1 cut(s)	1156
BfaI	CTAG	5 cut(s)	80, 614, 891, 933, 1157
BfmI	CTRYAG	1 cut(s)	900
BfuAI	ACCTGC	2 cut(s)	548, 1388
BglII	AGATCT	1 cut(s)	325
BisI	GCNGC	8 cut(s)	69, 206, 234, 360, 465, 468, 654, 841
BlpI	GCTNAGC	1 cut(s)	1296
BlsI	GCNGC	8 cut(s)	70, 207, 235, 361, 466, 469, 655, 842
Bme1390I	CCNGG	4 cut(s)	774, 919, 1231, 1312
Bme18I	GGWCC	2 cut(s)	283, 1357
BmeRI	GACNNNNNGTC	1 cut(s)	439
BmeT110I	CYCGRG	3 cut(s)	163, 248, 577
BmgBI	CACGTC	1 cut(s)	376
BmgT120I	GGNCC	4 cut(s)	283, 393, 1357, 1705
BmiI	GGNNCC	3 cut(s)	1149, 1309, 1359
BmrFI	CCNGG	4 cut(s)	774, 919, 1231, 1312
BmrI	ACTGGG	1 cut(s)	400
BmsI	GCATC	1 cut(s)	1307
BmuI	ACTGGG	1 cut(s)	400
BpiI	GAAGAC	2 cut(s)	320, 1428
BpmI	CTGGAG	1 cut(s)	1326
Bpu1102I	GCTNAGC	1 cut(s)	1296
BpuEI	CTTGAG	1 cut(s)	683
Bsa29I	ATCGAT	1 cut(s)	1008
BsaAI	YACGTR	1 cut(s)	860
BsaHI	GRCGYC	2 cut(s)	216, 1462
BsaI	GGTCTC	1 cut(s)	51
BsaJI	CCNNGG	3 cut(s)	699, 1229, 1361
BsaWI	WCCGGW	1 cut(s)	1198
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	4 cut(s)	97, 118, 1100, 1600
Bse1I	ACTGG	2 cut(s)	395, 1309
Bse3DI	GCAATG	2 cut(s)	652, 943
BseBI	CCWGG	4 cut(s)	774, 919, 1231, 1312
BseCI	ATCGAT	1 cut(s)	1008
BseDI	CCNNGG	3 cut(s)	699, 1229, 1361
BseGI	GGATG	4 cut(s)	10, 1083, 1402, 1609
BseLI	CCNNNNNNNGG	4 cut(s)	97, 118, 1100, 1600
BseMI	GCAATG	2 cut(s)	652, 943
BseMII	CTCAG	4 cut(s)	471, 923, 1287, 1551
BseNI	ACTGG	2 cut(s)	395, 1309
BseRI	GAGGAG	1 cut(s)	533
BseSI	GKGCMC	1 cut(s)	1094
BseXI	GCAGC	3 cut(s)	451, 640, 852
BseYI	CCCAGC	2 cut(s)	551, 1707
BsgI	GTGCAG	1 cut(s)	945
Bsh1236I	CGCG	7 cut(s)	184, 269, 566, 1623, 1656, 1689, 1722
BshFI	GGCC	8 cut(s)	68, 101, 125, 161, 395, 668, 1166, 1706
BshNI	GGYRCC	1 cut(s)	1147
BshVI	ATCGAT	1 cut(s)	1008
BsiHKCI	CYCGRG	3 cut(s)	163, 248, 577
BsiSI	CCGG	1 cut(s)	1199
BslFI	GGGAC	1 cut(s)	1343
BslI	CCNNNNNNNGG	4 cut(s)	97, 118, 1100, 1600
BsmAI	GTCTC	4 cut(s)	51, 470, 576, 950
BsmFI	GGGAC	1 cut(s)	1343
BsnI	GGCC	8 cut(s)	68, 101, 125, 161, 395, 668, 1166, 1706
Bso31I	GGTCTC	1 cut(s)	51
BsoBI	CYCGRG	3 cut(s)	163, 248, 577
Bsp1286I	GDGCHC	1 cut(s)	1094
Bsp143I	GATC	5 cut(s)	7, 325, 346, 912, 1397
Bsp1720I	GCTNAGC	1 cut(s)	1296
Bsp68I	TCGCGA	1 cut(s)	566
BspANI	GGCC	8 cut(s)	68, 101, 125, 161, 395, 668, 1166, 1706
BspCNI	CTCAG	4 cut(s)	472, 922, 1288, 1552
BspDI	ATCGAT	1 cut(s)	1008
BspFNI	CGCG	7 cut(s)	184, 269, 566, 1623, 1656, 1689, 1722
BspHI	TCATGA	1 cut(s)	1096
BspLI	GGNNCC	3 cut(s)	1149, 1309, 1359
BspMI	ACCTGC	2 cut(s)	548, 1388
BspQI	GCTCTTC	1 cut(s)	819
BspT107I	GGYRCC	1 cut(s)	1147
BspTNI	GGTCTC	1 cut(s)	51
BsrDI	GCAATG	2 cut(s)	652, 943
BsrI	ACTGG	2 cut(s)	395, 1309
BssECI	CCNNGG	3 cut(s)	699, 1229, 1361
BssMI	GATC	5 cut(s)	7, 325, 346, 912, 1397
BssNI	GRCGYC	2 cut(s)	216, 1462
BssSI	CACGAG	1 cut(s)	287
BssT1I	CCWWGG	2 cut(s)	699, 1361
Bst2BI	CACGAG	1 cut(s)	287
Bst2UI	CCWGG	4 cut(s)	774, 919, 1231, 1312
Bst4CI	ACNGT	3 cut(s)	298, 335, 728
Bst6I	CTCTTC	1 cut(s)	819
BstACI	GRCGYC	2 cut(s)	216, 1462
BstBAI	YACGTR	1 cut(s)	860
BstC8I	GCNNGC	2 cut(s)	924, 1443
BstDEI	CTNAG	5 cut(s)	480, 909, 1264, 1296, 1560
BstENI	CCTNNNNNAGG	1 cut(s)	1098
BstF5I	GGATG	4 cut(s)	10, 1083, 1402, 1609
BstFNI	CGCG	7 cut(s)	184, 269, 566, 1623, 1656, 1689, 1722
BstHHI	GCGC	3 cut(s)	186, 271, 294
BstKTI	GATC	5 cut(s)	10, 328, 349, 915, 1400
BstMAI	GTCTC	4 cut(s)	51, 470, 576, 950
BstMBI	GATC	5 cut(s)	7, 325, 346, 912, 1397
BstMWI	GCNNNNNNNGC	8 cut(s)	115, 131, 140, 202, 563, 896, 1438, 1476
BstNI	CCWGG	4 cut(s)	774, 919, 1231, 1312
BstNSI	RCATGY	3 cut(s)	742, 1055, 1587
BstSCI	CCNGG	4 cut(s)	772, 917, 1229, 1310
BstSFI	CTRYAG	1 cut(s)	900
BstSLI	GKGCMC	1 cut(s)	1094
BstUI	CGCG	7 cut(s)	184, 269, 566, 1623, 1656, 1689, 1722
BstV1I	GCAGC	3 cut(s)	451, 640, 852
BstV2I	GAAGAC	2 cut(s)	320, 1428
BstX2I	RGATCY	1 cut(s)	325
BstYI	RGATCY	1 cut(s)	325
Bsu15I	ATCGAT	1 cut(s)	1008
BsuRI	GGCC	8 cut(s)	68, 101, 125, 161, 395, 668, 1166, 1706
BsuTUI	ATCGAT	1 cut(s)	1008
BtrI	CACGTC	1 cut(s)	376
BtsCI	GGATG	4 cut(s)	10, 1083, 1402, 1609
BtsIMutI	CAGTG	1 cut(s)	1472
BtuMI	TCGCGA	1 cut(s)	566
BveI	ACCTGC	2 cut(s)	548, 1388
Cac8I	GCNNGC	2 cut(s)	924, 1443
CciI	TCATGA	1 cut(s)	1096
CfoI	GCGC	3 cut(s)	186, 271, 294
Cfr13I	GGNCC	4 cut(s)	283, 393, 1357, 1705
ClaI	ATCGAT	1 cut(s)	1008
CseI	GACGC	4 cut(s)	224, 407, 758, 1451
Csp6I	GTAC	4 cut(s)	12, 424, 861, 1739
CspCI	CAANNNNNGTGG	2 cut(s)	1502, 1537
CviAII	CATG	8 cut(s)	97, 127, 244, 739, 1052, 1097, 1321, 1584
CviQI	GTAC	4 cut(s)	12, 424, 861, 1739
DdeI	CTNAG	5 cut(s)	480, 909, 1264, 1296, 1560
DpnI	GATC	5 cut(s)	9, 327, 348, 914, 1399
DpnII	GATC	5 cut(s)	7, 325, 346, 912, 1397
DriI	GACNNNNNGTC	1 cut(s)	439
EaeI	YGGCCR	1 cut(s)	66
Eam1104I	CTCTTC	1 cut(s)	819
Eam1105I	GACNNNNNGTC	1 cut(s)	439
EarI	CTCTTC	1 cut(s)	819
EciI	GGCGGA	2 cut(s)	121, 183
Eco130I	CCWWGG	2 cut(s)	699, 1361
Eco31I	GGTCTC	1 cut(s)	51
Eco47I	GGWCC	2 cut(s)	283, 1357
Eco88I	CYCGRG	3 cut(s)	163, 248, 577
EcoNI	CCTNNNNNAGG	1 cut(s)	1098
EcoO109I	RGGNCCY	1 cut(s)	1357
EcoRI	GAATTC	1 cut(s)	339
EcoRII	CCWGG	4 cut(s)	772, 917, 1229, 1310
EcoT14I	CCWWGG	2 cut(s)	699, 1361
EcoT22I	ATGCAT	1 cut(s)	1322
ErhI	CCWWGG	2 cut(s)	699, 1361
FaeI	CATG	8 cut(s)	100, 130, 247, 742, 1055, 1100, 1324, 1587
FalI	AAGNNNNNCTT	4 cut(s)	798, 830, 1247, 1279
FaqI	GGGAC	1 cut(s)	1343
FatI	CATG	8 cut(s)	96, 126, 243, 738, 1051, 1096, 1320, 1583
FauNDI	CATATG	1 cut(s)	1485
FblI	GTMKAC	2 cut(s)	455, 1018
Fnu4HI	GCNGC	8 cut(s)	69, 206, 234, 360, 465, 468, 654, 841
FokI	GGATG	4 cut(s)	17, 1090, 1389, 1616
Fsp4HI	GCNGC	8 cut(s)	69, 206, 234, 360, 465, 468, 654, 841
FspBI	CTAG	5 cut(s)	80, 614, 891, 933, 1157
GlaI	GCGC	3 cut(s)	185, 270, 293
GluI	GCNGC	8 cut(s)	69, 206, 234, 360, 465, 468, 654, 841
GsaI	CCCAGC	2 cut(s)	555, 1711
GsuI	CTGGAG	1 cut(s)	1326
HaeIII	GGCC	8 cut(s)	68, 101, 125, 161, 395, 668, 1166, 1706
HapII	CCGG	1 cut(s)	1199
HgaI	GACGC	4 cut(s)	224, 407, 758, 1451
HhaI	GCGC	3 cut(s)	186, 271, 294
Hin1I	GRCGYC	2 cut(s)	216, 1462
Hin1II	CATG	8 cut(s)	100, 130, 247, 742, 1055, 1100, 1324, 1587
Hin6I	GCGC	3 cut(s)	184, 269, 292
HinP1I	GCGC	3 cut(s)	184, 269, 292
HincII	GTYRAC	1 cut(s)	456
HindII	GTYRAC	1 cut(s)	456
HinfI	GANTC	8 cut(s)	83, 264, 437, 610, 929, 1179, 1187, 1596
HpaII	CCGG	1 cut(s)	1199
HphI	GGTGA	4 cut(s)	523, 688, 907, 1129
Hpy166II	GTNNAC	2 cut(s)	456, 1019
Hpy188I	TCNGA	6 cut(s)	46, 88, 304, 351, 591, 912
Hpy188III	TCNNGA	5 cut(s)	80, 344, 565, 614, 1097
Hpy8I	GTNNAC	2 cut(s)	456, 1019
HpyAV	CCTTC	9 cut(s)	112, 210, 313, 532, 671, 855, 946, 1094, 1496
HpyCH4III	ACNGT	3 cut(s)	298, 335, 728
HpyCH4IV	ACGT	3 cut(s)	255, 375, 859
HpyF10VI	GCNNNNNNNGC	8 cut(s)	115, 131, 140, 202, 563, 896, 1438, 1476
HpyF3I	CTNAG	5 cut(s)	480, 909, 1264, 1296, 1560
HpySE526I	ACGT	3 cut(s)	255, 375, 859
Hsp92I	GRCGYC	2 cut(s)	216, 1462
Hsp92II	CATG	8 cut(s)	100, 130, 247, 742, 1055, 1100, 1324, 1587
HspAI	GCGC	3 cut(s)	184, 269, 292
Kzo9I	GATC	5 cut(s)	7, 325, 346, 912, 1397
LguI	GCTCTTC	1 cut(s)	819
LmnI	GCTCC	4 cut(s)	114, 658, 1307, 1556
Lsp1109I	GCAGC	3 cut(s)	451, 640, 852
LweI	GCATC	1 cut(s)	1307
MaeI	CTAG	5 cut(s)	80, 614, 891, 933, 1157
MaeII	ACGT	3 cut(s)	255, 375, 859
MaeIII	GTNAC	7 cut(s)	572, 715, 754, 853, 1201, 1508, 1610
MalI	GATC	5 cut(s)	9, 327, 348, 914, 1399
MboI	GATC	5 cut(s)	7, 325, 346, 912, 1397
MboII	GAAGA	8 cut(s)	325, 335, 619, 806, 989, 1182, 1433, 1579
MfeI	CAATTG	2 cut(s)	1348, 1427
MflI	RGATCY	1 cut(s)	325
MhlI	GDGCHC	1 cut(s)	1094
MluCI	AATT	7 cut(s)	339, 484, 827, 966, 1139, 1348, 1427
MlyI	GAGTC	2 cut(s)	77, 923
MmeI	TCCRAC	1 cut(s)	111
Mph1103I	ATGCAT	1 cut(s)	1322
MseI	TTAA	5 cut(s)	684, 870, 882, 1071, 1244
MslI	CAYNNNNRTG	1 cut(s)	242
MspI	CCGG	1 cut(s)	1199
MspR9I	CCNGG	4 cut(s)	774, 919, 1231, 1312
MunI	CAATTG	2 cut(s)	1348, 1427
MvaI	CCWGG	4 cut(s)	774, 919, 1231, 1312
MvnI	CGCG	7 cut(s)	184, 269, 566, 1623, 1656, 1689, 1722
MwoI	GCNNNNNNNGC	8 cut(s)	115, 131, 140, 202, 563, 896, 1438, 1476
NdeI	CATATG	1 cut(s)	1485
NdeII	GATC	5 cut(s)	7, 325, 346, 912, 1397
NlaIII	CATG	8 cut(s)	100, 130, 247, 742, 1055, 1100, 1324, 1587
NlaIV	GGNNCC	3 cut(s)	1149, 1309, 1359
NmuCI	GTSAC	3 cut(s)	572, 715, 754
NruI	TCGCGA	1 cut(s)	566
NsiI	ATGCAT	1 cut(s)	1322
NspI	RCATGY	3 cut(s)	742, 1055, 1587
PaeR7I	CTCGAG	2 cut(s)	163, 248
PagI	TCATGA	1 cut(s)	1096
PaqCI	CACCTGC	1 cut(s)	548
PciI	ACATGT	1 cut(s)	1583
PciSI	GCTCTTC	1 cut(s)	819
PcsI	WCGNNNNNNNCGW	7 cut(s)	161, 294, 381, 446, 449, 452, 1738
PfeI	GAWTC	6 cut(s)	264, 437, 610, 1179, 1187, 1596
PfoI	TCCNGGA	1 cut(s)	772
PkrI	GCNGC	8 cut(s)	70, 207, 235, 361, 466, 469, 655, 842
PleI	GAGTC	2 cut(s)	77, 923
PpsI	GAGTC	2 cut(s)	77, 923
Ppu21I	YACGTR	1 cut(s)	860
PpuMI	RGGWCCY	1 cut(s)	1357
PscI	ACATGT	1 cut(s)	1583
PshBI	ATTAAT	1 cut(s)	1244
PsiI	TTATAA	1 cut(s)	1392
Psp5II	RGGWCCY	1 cut(s)	1357
Psp6I	CCWGG	4 cut(s)	772, 917, 1229, 1310
PspFI	CCCAGC	2 cut(s)	551, 1707
PspGI	CCWGG	4 cut(s)	772, 917, 1229, 1310
PspN4I	GGNNCC	3 cut(s)	1149, 1309, 1359
PspPI	GGNCC	4 cut(s)	283, 393, 1357, 1705
PspPPI	RGGWCCY	1 cut(s)	1357
PspXI	VCTCGAGB	2 cut(s)	163, 248
PsuI	RGATCY	1 cut(s)	325
RruI	TCGCGA	1 cut(s)	566
RsaI	GTAC	4 cut(s)	13, 425, 862, 1740
RsaNI	GTAC	4 cut(s)	12, 424, 861, 1739
RseI	CAYNNNNRTG	1 cut(s)	242
SalI	GTCGAC	1 cut(s)	454
SapI	GCTCTTC	1 cut(s)	819
SaqAI	TTAA	5 cut(s)	684, 870, 882, 1071, 1244
SatI	GCNGC	8 cut(s)	69, 206, 234, 360, 465, 468, 654, 841
Sau3AI	GATC	5 cut(s)	7, 325, 346, 912, 1397
Sau96I	GGNCC	4 cut(s)	283, 393, 1357, 1705
SchI	GAGTC	2 cut(s)	77, 923
ScrFI	CCNGG	4 cut(s)	774, 919, 1231, 1312
SduI	GDGCHC	1 cut(s)	1094
SfaNI	GCATC	1 cut(s)	1307
SfcI	CTRYAG	1 cut(s)	900
Sfr274I	CTCGAG	2 cut(s)	163, 248
SinI	GGWCC	2 cut(s)	283, 1357
SlaI	CTCGAG	2 cut(s)	163, 248
SmiMI	CAYNNNNRTG	1 cut(s)	242
SmlI	CTYRAG	3 cut(s)	163, 248, 662
SmoI	CTYRAG	3 cut(s)	163, 248, 662
SpeI	ACTAGT	1 cut(s)	1156
Sse9I	AATT	7 cut(s)	339, 484, 827, 966, 1139, 1348, 1427
SspI	AATATT	2 cut(s)	836, 1123
SspMI	CTAG	5 cut(s)	80, 614, 891, 933, 1157
StyD4I	CCNGG	4 cut(s)	772, 917, 1229, 1310
StyI	CCWWGG	2 cut(s)	699, 1361
TaaI	ACNGT	3 cut(s)	298, 335, 728
TaiI	ACGT	3 cut(s)	258, 378, 862
TaqI	TCGA	9 cut(s)	93, 164, 170, 176, 249, 337, 455, 597, 1008
TasI	AATT	7 cut(s)	339, 484, 827, 966, 1139, 1348, 1427
TauI	GCSGC	5 cut(s)	71, 208, 236, 362, 470
TfiI	GAWTC	6 cut(s)	264, 437, 610, 1179, 1187, 1596
Tru1I	TTAA	5 cut(s)	684, 870, 882, 1071, 1244
Tru9I	TTAA	5 cut(s)	684, 870, 882, 1071, 1244
TscAI	CASTG	1 cut(s)	1472
TseFI	GTSAC	3 cut(s)	572, 715, 754
TseI	GCWGC	3 cut(s)	464, 653, 840
Tsp45I	GTSAC	3 cut(s)	572, 715, 754
TspDTI	ATGAA	5 cut(s)	326, 551, 1058, 1113, 1337
TspGWI	ACGGA	2 cut(s)	411, 1280
TspRI	CASTG	1 cut(s)	1472
VpaK11BI	GGWCC	2 cut(s)	283, 1357
VspI	ATTAAT	1 cut(s)	1244
XagI	CCTNNNNNAGG	1 cut(s)	1098
XapI	RAATTY	4 cut(s)	339, 484, 827, 1139
XbaI	TCTAGA	2 cut(s)	79, 613
XceI	RCATGY	3 cut(s)	742, 1055, 1587
XcmI	CCANNNNNNNNNTGG	1 cut(s)	387
XhoI	CTCGAG	2 cut(s)	163, 248
XmiI	GTMKAC	2 cut(s)	455, 1018
XspI	CTAG	5 cut(s)	80, 614, 891, 933, 1157
Zsp2I	ATGCAT	1 cut(s)	1322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.