Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000411

Physical Location & Seq

Genomic Coordinates Reverse (-)

28884059 .. 28887968

Gene Structure 3910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g33480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGACCAGTACCAGTAGAGTCCCCTTCTCCTCCGTCGACTACGATTTCCTCACCGTCTCCGATCACCGCCACGACCACGATTTCATGGAAATTGACACCCTCGAATCCGACACCGAATTCGCCTTCAACCTCCAACTCCAAGAAGCCCTAGCCGCCTCCCTCGCCCCTCAACCCTCCTCCTCCGCCGCCGCTTCCGTCCTCGTAGGAATGGAGCAGGCGCTCAAGGACAGCGTGCAGAGCGAGATTGAATTGCGGCGGGCGAGAGAGGACCTCGCCCGCGCGATTCACGACGCCAAGGTCGCGAGGGAGATCGTCGAAATTCCCGACGACGAGTGGGAACAGTCCGGCGCCGACTTCGCCAAGCCGTTTGATGTAGGCTCTTCGTCGGCGGCGGCGGCGGAGAGTGAGGAGAGCGATTTCAGGCTGTATTTCAAGGGATTGGTGAGCGAGGAACAGGTTGGGGATCAGAAATTGGTGCTGGCCGGAATCGGAGTAGCGATATGTGATTCCAGGGGTAATCTGGTTTTCGAGGTTAAGAAACCGTTGATTGGGAATGGGCTTAGTAGAAATTCGGCCCAATTGAAAGCCTTGATCGAAGGACTTACTGTTGCTCTGTGTTTGGGAATGAAGCGAATTACATTCTTCTGTGATAACAATCCAATTTTTCAGTTTATTAATGGGAAATGGTCAGCAAAGCAGCAAAAGGTATTAGATCTTGTTAATCAGGTTAAGAGTCTTCGAAGTAAGTTTACGCAATGCAACTCCAGGCTTGTGCCTCGGTTGGAAATTAAGTTTGCATCTAAACTTGCAAGAGAGGCCATAGAGTCTCACTCTCAGATGAAGCCTGCGGAATCCAGCAATAGTAAGAATGTGAAAGAGACTTGTGTGATCTGCATGGAAGATAGTGATGTTAGTCAGATTTTTTCGGTTGATGGCTGCCTTCATCGGTATTGCTTTTCTTGTATGAAACAGCATGTGGAAGTGAAATTGTTTGATGGGATCCTTCCTAAATGTCCTCATGAAGCTTGTAAGTCTGACCTTAGTGTTGACAGTTGTGTGAAATTCTTGACACCTAAACATGTTGACACTATGCGCCAGGCAATAAAGGAAGCTTCAATTCCAGCAACTGATAGAGTTTATTGCCCATATCCAAGGTGCTCTCTCTTAATGTCGAAAAGTGAGGTTTTACAATATGCTAAGGAAACCTTGACGGGGGCTGTGGAACGATCAGGACTAAGGAGATGCATGAAATGTCAATACCGTTTTTGCATCAACTGTAAAGTCCCTTGGCACAAAAGCATCACATGTGCTGACTACAAAAGGTCGAATCCTAATCCTCCAGAAGAGGACACAAAGCTAAATTCCCTTGCTTCAAGTAAGCTTTGGCGCCAGTGTGTGAAGTGCAGCCATATGATTGAACTTATTGAAGGTTGCTACCACATGACTTGCAGGTGTAATTATGAGTTCTGCTATAATTGTGGAGCTGAATGGAAACACAAGAAGGCAACATGTAAATGCCCTCTTTGGCATGAAGGTAATATTGTGCATGATGAGGATGGTGAATCTGATGAAGAGGAGTCGGATCCTGATTCTGATTCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030154 GO:0030162 GO:0030435 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032502 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

535

Amino Acids

59.93

Weight (kDa)

5.63

Isoelectric Point (pI)

50.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_3	PF13456	157 - 273	6.7e-26	Reverse transcriptase-like
IBR	PF01485	375 - 436	3.1e-11	IBR domain, a half RING-finger domain
IBR	PF01485	452 - 504	5.1e-09	IBR domain, a half RING-finger domain
IBR_1	PF22191	464 - 502	2.9e-06	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45470 AT3G45555 AT5G60250
fragaria_vesca	FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33450 FvH4_3g33470 FvH4_3g33471 FvH4_3g33480 FvH4_3g33480
malus_domestica	MD03G1130800.v1.1 MD11G1125600.v1.1 MD11G1125700.v1.1 MD11G1125800.v1.1 MD11G1126100.v1.1 MD11G1152600.v1.1
prunus_persica	Prupe.6G094100_v2.0.a1 Prupe.6G094100_v2.0.a1 Prupe.6G094200_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G094500_v2.0.a1 Prupe.6G115600_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1 Prupe.6G115700_v2.0.a1
pyrus_communis	pycom11g10590 pycom11g10600 pycom11g10620 pycom11g10640 pycom11g12510
rosa_chinensis	RchiOBHm_Chr5g0060811 RchiOBHm_Chr5g0060821 RchiOBHm_Chr5g0060851 RchiOBHm_Chr5g0060881 RchiOBHm_Chr5g0060891
rosa_laevigata	RLG00000035404 RLG00000035405 RLG00000035407 RLG00000035408
rosa_multiflora	Rmu_sc0000420.1_g000048 Rmu_sc0000420.1_g000049 Rmu_sc0000727.1_g000006 Rmu_sc0000727.1_g000007 Rmu_sc0000727.1_g000024 Rmu_sc0000727.1_g000025 Rmu_sc0024212.1_g000001 Rmu_sc0024212.1_g000003 Rmu_sc0027900.1_g000003 Rmu_sc0030258.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019780 Rroxscaffold_1G00019790 Rroxscaffold_1G00019800 Rroxscaffold_1G00019810 Rroxscaffold_1G00019820 Rroxscaffold_1G00019840 Rroxscaffold_1G00019850
rosa_rugosa	Rorug05G0334200 Rorug05G0334300 Rorug05G0334400 Rorug05G0334500 Rorug05G0334600 Rorug05G0334700
rosa_samantha	Rh4BG359600 Rh4CG373900 Rh5AG397000 Rh5AG397100 Rh5AG397200 Rh5AG397300 Rh5AG397400 Rh5AG397500 Rh5AG397600 Rh5AG397700 Rh5BG409300 Rh5BG409400 Rh5BG409800 Rh5BG409900 Rh5BG410000 Rh5BG410100 Rh5CG434100 Rh5CG434200 Rh5CG434600 Rh5CG434700 Rh5CG434800 Rh5CG434900 Rh5CG435000 Rh5DG424100 Rh5DG424200 Rh5DG424400 Rh5DG424500 Rh5DG424600 Rh5DG424800
rosa_wichuraiana	Rw5G037420 Rw5G037430 Rw5G037480 Rw5G037490 Rw5G037500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1440
AasI	GACNNNNNNGTC	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	1440
AccB1I	GGYRCC	2 cut(s)	347, 1386
AccI	GTMKAC	1 cut(s)	36
AccII	CGCG	3 cut(s)	279, 281, 302
AclWI	GGATC	5 cut(s)	471, 994, 1007, 1577, 1590
AcoI	YGGCCR	1 cut(s)	480
AcsI	RAATTY	5 cut(s)	116, 318, 568, 1061, 1360
AcyI	GRCGYC	3 cut(s)	291, 348, 1387
AfaI	GTAC	1 cut(s)	10
AfiI	CCNNNNNNNGG	2 cut(s)	548, 1212
AflIII	ACRYGT	3 cut(s)	1078, 1304, 1508
AgsI	TTSAA	8 cut(s)	127, 248, 433, 583, 1116, 1374, 1418, 1427
AjnI	CCWGG	3 cut(s)	509, 764, 1095
AluBI	AGCT	5 cut(s)	1025, 1112, 1357, 1381, 1484
AluI	AGCT	5 cut(s)	1025, 1112, 1357, 1381, 1484
Alw21I	GWGCWC	1 cut(s)	1160
Alw26I	GTCTC	3 cut(s)	61, 831, 872
AlwI	GGATC	5 cut(s)	471, 994, 1007, 1577, 1590
AlwNI	CAGNNNCTG	1 cut(s)	1127
AoxI	GGCC	3 cut(s)	480, 573, 816
ApeKI	GCWGC	3 cut(s)	697, 936, 1404
ApoI	RAATTY	5 cut(s)	116, 318, 568, 1061, 1360
ArsI	GACNNNNNNTTYG	2 cut(s)	101, 133
AseI	ATTAAT	1 cut(s)	675
AspLEI	GCGC	5 cut(s)	220, 281, 350, 1095, 1389
AspS9I	GGNCC	2 cut(s)	268, 574
AsuHPI	GGTGA	4 cut(s)	43, 56, 454, 1571
AsuII	TTCGAA	1 cut(s)	739
AvaII	GGWCC	1 cut(s)	268
BamHI	GGATCC	2 cut(s)	999, 1582
BanI	GGYRCC	2 cut(s)	347, 1386
BarI	GAAGNNNNNNTAC	2 cut(s)	733, 765
BbsI	GAAGAC	1 cut(s)	728
Bbv12I	GWGCWC	1 cut(s)	1160
BbvI	GCAGC	3 cut(s)	709, 923, 1416
BccI	CCATC	3 cut(s)	926, 989, 1550
BceAI	ACGGC	1 cut(s)	349
BciT130I	CCWGG	3 cut(s)	511, 766, 1097
BcoDI	GTCTC	3 cut(s)	61, 831, 872
BfaI	CTAG	1 cut(s)	149
BfoI	RGCGCY	3 cut(s)	221, 351, 1390
BfuAI	ACCTGC	1 cut(s)	1440
BglII	AGATCT	1 cut(s)	712
Bme1390I	CCNGG	3 cut(s)	511, 766, 1097
Bme18I	GGWCC	1 cut(s)	268
BmgT120I	GGNCC	2 cut(s)	268, 574
BmiI	GGNNCC	4 cut(s)	349, 1001, 1388, 1584
BmrFI	CCNGG	3 cut(s)	511, 766, 1097
BmsI	GCATC	4 cut(s)	806, 1232, 1278, 1308
BpiI	GAAGAC	1 cut(s)	728
BplI	GAGNNNNNCTC	4 cut(s)	255, 287, 815, 847
BpmI	CTGGAG	2 cut(s)	748, 1323
Bpu10I	CCTNAGC	1 cut(s)	1197
Bpu14I	TTCGAA	1 cut(s)	739
BpuEI	CTTGAG	1 cut(s)	206
BsaBI	GATNNNNATC	1 cut(s)	654
BsaHI	GRCGYC	3 cut(s)	291, 348, 1387
BsaJI	CCNNGG	5 cut(s)	294, 510, 776, 1151, 1286
Bsc4I	CCNNNNNNNGG	2 cut(s)	548, 1212
Bse1I	ACTGG	3 cut(s)	6, 12, 1390
Bse3DI	GCAATG	1 cut(s)	761
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	3 cut(s)	511, 766, 1097
BseDI	CCNNGG	5 cut(s)	294, 510, 776, 1151, 1286
BseGI	GGATG	1 cut(s)	1561
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	2 cut(s)	548, 1212
BseMI	GCAATG	1 cut(s)	761
BseMII	CTCAG	1 cut(s)	848
BseNI	ACTGG	3 cut(s)	6, 12, 1390
BseRI	GAGGAG	5 cut(s)	19, 166, 169, 422, 1589
BseXI	GCAGC	3 cut(s)	709, 923, 1416
BsgI	GTGCAG	2 cut(s)	254, 1423
Bsh1236I	CGCG	3 cut(s)	279, 281, 302
BshFI	GGCC	3 cut(s)	482, 575, 818
BshNI	GGYRCC	2 cut(s)	347, 1386
BsiHKAI	GWGCWC	1 cut(s)	1160
BsiSI	CCGG	2 cut(s)	345, 483
BslFI	GGGAC	2 cut(s)	5, 1268
BslI	CCNNNNNNNGG	2 cut(s)	548, 1212
BsmAI	GTCTC	3 cut(s)	61, 831, 872
BsmBI	CGTCTC	1 cut(s)	61
BsmFI	GGGAC	2 cut(s)	5, 1268
BsnI	GGCC	3 cut(s)	482, 575, 818
Bsp119I	TTCGAA	1 cut(s)	739
Bsp1286I	GDGCHC	1 cut(s)	1160
Bsp143I	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
Bsp68I	TCGCGA	1 cut(s)	302
BspANI	GGCC	3 cut(s)	482, 575, 818
BspCNI	CTCAG	1 cut(s)	847
BspFNI	CGCG	3 cut(s)	279, 281, 302
BspHI	TCATGA	1 cut(s)	1018
BspLI	GGNNCC	4 cut(s)	349, 1001, 1388, 1584
BspMI	ACCTGC	1 cut(s)	1440
BspPI	GGATC	5 cut(s)	471, 994, 1007, 1577, 1590
BspQI	GCTCTTC	1 cut(s)	385
BspT104I	TTCGAA	1 cut(s)	739
BspT107I	GGYRCC	2 cut(s)	347, 1386
BsrDI	GCAATG	1 cut(s)	761
BsrI	ACTGG	3 cut(s)	6, 12, 1390
BssECI	CCNNGG	5 cut(s)	294, 510, 776, 1151, 1286
BssMI	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
BssNI	GRCGYC	3 cut(s)	291, 348, 1387
BssT1I	CCWWGG	3 cut(s)	294, 1151, 1286
Bst2UI	CCWGG	3 cut(s)	511, 766, 1097
Bst4CI	ACNGT	7 cut(s)	55, 342, 543, 607, 1052, 1262, 1277
Bst6I	CTCTTC	3 cut(s)	385, 1338, 1566
BstACI	GRCGYC	3 cut(s)	291, 348, 1387
BstBI	TTCGAA	1 cut(s)	739
BstC8I	GCNNGC	6 cut(s)	216, 233, 258, 277, 480, 846
BstDEI	CTNAG	5 cut(s)	560, 834, 1040, 1197, 1235
BstF5I	GGATG	1 cut(s)	1561
BstFNI	CGCG	3 cut(s)	279, 281, 302
BstH2I	RGCGCY	3 cut(s)	221, 351, 1390
BstHHI	GCGC	5 cut(s)	220, 281, 350, 1095, 1389
BstKTI	GATC	9 cut(s)	64, 312, 466, 594, 715, 891, 1002, 1229, 1585
BstMAI	GTCTC	3 cut(s)	61, 831, 872
BstMBI	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
BstMWI	GCNNNNNNNGC	7 cut(s)	152, 161, 237, 299, 356, 395, 815
BstNI	CCWGG	3 cut(s)	511, 766, 1097
BstNSI	RCATGY	4 cut(s)	977, 1082, 1308, 1512
BstSCI	CCNGG	3 cut(s)	509, 764, 1095
BstUI	CGCG	3 cut(s)	279, 281, 302
BstV1I	GCAGC	3 cut(s)	709, 923, 1416
BstV2I	GAAGAC	1 cut(s)	728
BstX2I	RGATCY	3 cut(s)	712, 999, 1582
BstYI	RGATCY	3 cut(s)	712, 999, 1582
BsuRI	GGCC	3 cut(s)	482, 575, 818
BtsCI	GGATG	1 cut(s)	1561
BtsIMutI	CAGTG	1 cut(s)	1397
BtuMI	TCGCGA	1 cut(s)	302
BveI	ACCTGC	1 cut(s)	1440
Cac8I	GCNNGC	6 cut(s)	216, 233, 258, 277, 480, 846
CaiI	CAGNNNCTG	1 cut(s)	1127
CciI	TCATGA	1 cut(s)	1018
CfoI	GCGC	5 cut(s)	220, 281, 350, 1095, 1389
Cfr13I	GGNCC	2 cut(s)	268, 574
CseI	GACGC	1 cut(s)	299
Csp6I	GTAC	1 cut(s)	9
CspCI	CAANNNNNGTGG	2 cut(s)	1427, 1462
CviQI	GTAC	1 cut(s)	9
DdeI	CTNAG	5 cut(s)	560, 834, 1040, 1197, 1235
DinI	GGCGCC	2 cut(s)	349, 1388
DpnI	GATC	9 cut(s)	63, 311, 465, 593, 714, 890, 1001, 1228, 1584
DpnII	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
DrdI	GACNNNNNNGTC	1 cut(s)	296
DseDI	GACNNNNNNGTC	1 cut(s)	296
EaeI	YGGCCR	1 cut(s)	480
Eam1104I	CTCTTC	3 cut(s)	385, 1338, 1566
EarI	CTCTTC	3 cut(s)	385, 1338, 1566
EciI	GGCGGA	2 cut(s)	172, 413
Eco130I	CCWWGG	3 cut(s)	294, 1151, 1286
Eco47I	GGWCC	1 cut(s)	268
EcoO109I	RGGNCCY	1 cut(s)	268
EcoRI	GAATTC	1 cut(s)	116
EcoRII	CCWGG	3 cut(s)	509, 764, 1095
EcoT14I	CCWWGG	3 cut(s)	294, 1151, 1286
EcoT22I	ATGCAT	1 cut(s)	1247
EgeI	GGCGCC	2 cut(s)	349, 1388
EheI	GGCGCC	2 cut(s)	349, 1388
ErhI	CCWWGG	3 cut(s)	294, 1151, 1286
Esp3I	CGTCTC	1 cut(s)	61
FalI	AAGNNNNNCTT	2 cut(s)	1190, 1222
FaqI	GGGAC	2 cut(s)	5, 1268
FauI	CCCGC	2 cut(s)	249, 284
FauNDI	CATATG	1 cut(s)	1410
FblI	GTMKAC	1 cut(s)	36
FokI	GGATG	1 cut(s)	1568
FspBI	CTAG	1 cut(s)	149
GlaI	GCGC	5 cut(s)	219, 280, 349, 1094, 1388
GsuI	CTGGAG	2 cut(s)	748, 1323
HaeII	RGCGCY	3 cut(s)	221, 351, 1390
HaeIII	GGCC	3 cut(s)	482, 575, 818
HapII	CCGG	2 cut(s)	345, 483
HgaI	GACGC	1 cut(s)	299
HhaI	GCGC	5 cut(s)	220, 281, 350, 1095, 1389
Hin1I	GRCGYC	3 cut(s)	291, 348, 1387
Hin6I	GCGC	5 cut(s)	218, 279, 348, 1093, 1387
HinP1I	GCGC	5 cut(s)	218, 279, 348, 1093, 1387
HincII	GTYRAC	3 cut(s)	37, 1048, 1084
HindII	GTYRAC	3 cut(s)	37, 1048, 1084
HindIII	AAGCTT	3 cut(s)	1023, 1110, 1379
HpaII	CCGG	2 cut(s)	345, 483
HphI	GGTGA	4 cut(s)	43, 56, 454, 1571
Hpy166II	GTNNAC	4 cut(s)	37, 750, 1048, 1084
Hpy188III	TCNNGA	8 cut(s)	287, 301, 323, 1019, 1066, 1230, 1340, 1586
Hpy8I	GTNNAC	4 cut(s)	37, 750, 1048, 1084
Hpy99I	CGWCG	6 cut(s)	38, 293, 317, 329, 332, 388
HpyAV	CCTTC	8 cut(s)	34, 133, 590, 950, 1013, 1421, 1495, 1526
HpyCH4III	ACNGT	7 cut(s)	55, 342, 543, 607, 1052, 1262, 1277
HpyF10VI	GCNNNNNNNGC	7 cut(s)	152, 161, 237, 299, 356, 395, 815
HpyF3I	CTNAG	5 cut(s)	560, 834, 1040, 1197, 1235
Hsp92I	GRCGYC	3 cut(s)	291, 348, 1387
HspAI	GCGC	5 cut(s)	218, 279, 348, 1093, 1387
KasI	GGCGCC	2 cut(s)	347, 1386
Kzo9I	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
LguI	GCTCTTC	1 cut(s)	385
LmnI	GCTCC	2 cut(s)	211, 1481
Lsp1109I	GCAGC	3 cut(s)	709, 923, 1416
LweI	GCATC	4 cut(s)	806, 1232, 1278, 1308
MaeI	CTAG	1 cut(s)	149
MalI	GATC	9 cut(s)	63, 311, 465, 593, 714, 890, 1001, 1228, 1584
MboI	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
MboII	GAAGA	6 cut(s)	372, 634, 728, 911, 1355, 1583
MfeI	CAATTG	1 cut(s)	578
MflI	RGATCY	3 cut(s)	712, 999, 1582
MhlI	GDGCHC	1 cut(s)	1160
Mly113I	GGCGCC	2 cut(s)	348, 1387
MlyI	GAGTC	4 cut(s)	27, 742, 833, 1586
MmeI	TCCRAC	4 cut(s)	132, 157, 762, 1560
Mph1103I	ATGCAT	1 cut(s)	1247
MseI	TTAA	6 cut(s)	534, 675, 720, 729, 789, 1166
MslI	CAYNNNNRTG	1 cut(s)	1513
MspI	CCGG	2 cut(s)	345, 483
MspR9I	CCNGG	3 cut(s)	511, 766, 1097
MunI	CAATTG	1 cut(s)	578
MvaI	CCWGG	3 cut(s)	511, 766, 1097
MvnI	CGCG	3 cut(s)	279, 281, 302
MwoI	GCNNNNNNNGC	7 cut(s)	152, 161, 237, 299, 356, 395, 815
NarI	GGCGCC	2 cut(s)	348, 1387
NdeI	CATATG	1 cut(s)	1410
NdeII	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
NlaIV	GGNNCC	4 cut(s)	349, 1001, 1388, 1584
NruI	TCGCGA	1 cut(s)	302
NsiI	ATGCAT	1 cut(s)	1247
NspI	RCATGY	4 cut(s)	977, 1082, 1308, 1512
NspV	TTCGAA	1 cut(s)	739
PagI	TCATGA	1 cut(s)	1018
PaqCI	CACCTGC	1 cut(s)	1440
PciI	ACATGT	3 cut(s)	1078, 1304, 1508
PciSI	GCTCTTC	1 cut(s)	385
PcsI	WCGNNNNNNNCGW	1 cut(s)	321
PfeI	GAWTC	9 cut(s)	104, 283, 486, 506, 851, 1327, 1562, 1589, 1595
PleI	GAGTC	4 cut(s)	26, 741, 832, 1585
PluTI	GGCGCC	2 cut(s)	351, 1390
PpsI	GAGTC	4 cut(s)	26, 741, 832, 1585
PpuMI	RGGWCCY	1 cut(s)	268
PscI	ACATGT	3 cut(s)	1078, 1304, 1508
PshBI	ATTAAT	1 cut(s)	675
Psp5II	RGGWCCY	1 cut(s)	268
Psp6I	CCWGG	3 cut(s)	509, 764, 1095
PspGI	CCWGG	3 cut(s)	509, 764, 1095
PspN4I	GGNNCC	4 cut(s)	349, 1001, 1388, 1584
PspPI	GGNCC	2 cut(s)	268, 574
PspPPI	RGGWCCY	1 cut(s)	268
PstNI	CAGNNNCTG	1 cut(s)	1127
PsuI	RGATCY	3 cut(s)	712, 999, 1582
RruI	TCGCGA	1 cut(s)	302
RsaI	GTAC	1 cut(s)	10
RsaNI	GTAC	1 cut(s)	9
RseI	CAYNNNNRTG	1 cut(s)	1513
SalI	GTCGAC	1 cut(s)	35
SapI	GCTCTTC	1 cut(s)	385
SaqAI	TTAA	6 cut(s)	534, 675, 720, 729, 789, 1166
Sau3AI	GATC	9 cut(s)	61, 309, 463, 591, 712, 888, 999, 1226, 1582
Sau96I	GGNCC	2 cut(s)	268, 574
SchI	GAGTC	4 cut(s)	27, 742, 833, 1586
ScrFI	CCNGG	3 cut(s)	511, 766, 1097
SduI	GDGCHC	1 cut(s)	1160
SfaNI	GCATC	4 cut(s)	806, 1232, 1278, 1308
SfoI	GGCGCC	2 cut(s)	349, 1388
SfuI	TTCGAA	1 cut(s)	739
SinI	GGWCC	1 cut(s)	268
SmiMI	CAYNNNNRTG	1 cut(s)	1513
SmlI	CTYRAG	1 cut(s)	221
SmoI	CTYRAG	1 cut(s)	221
SspDI	GGCGCC	2 cut(s)	347, 1386
SspI	AATATT	1 cut(s)	1540
SspMI	CTAG	1 cut(s)	149
StyD4I	CCNGG	3 cut(s)	509, 764, 1095
StyI	CCWWGG	3 cut(s)	294, 1151, 1286
TaaI	ACNGT	7 cut(s)	55, 342, 543, 607, 1052, 1262, 1277
TaqI	TCGA	8 cut(s)	36, 102, 315, 528, 594, 739, 1172, 1325
TauI	GCSGC	7 cut(s)	155, 188, 191, 256, 392, 395, 398
TfiI	GAWTC	9 cut(s)	104, 283, 486, 506, 851, 1327, 1562, 1589, 1595
Tru1I	TTAA	6 cut(s)	534, 675, 720, 729, 789, 1166
Tru9I	TTAA	6 cut(s)	534, 675, 720, 729, 789, 1166
TscAI	CASTG	1 cut(s)	1397
TseI	GCWGC	3 cut(s)	697, 936, 1404
TspDTI	ATGAA	9 cut(s)	73, 641, 854, 932, 980, 1035, 1262, 1545, 1584
TspGWI	ACGGA	2 cut(s)	22, 184
TspRI	CASTG	1 cut(s)	1397
VpaK11BI	GGWCC	1 cut(s)	268
VspI	ATTAAT	1 cut(s)	675
XapI	RAATTY	5 cut(s)	116, 318, 568, 1061, 1360
XceI	RCATGY	4 cut(s)	977, 1082, 1308, 1512
XcmI	CCANNNNNNNNNTGG	1 cut(s)	517
XmiI	GTMKAC	1 cut(s)	36
XspI	CTAG	1 cut(s)	149
Zsp2I	ATGCAT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.