MD17G1118100.v1.1

SAWADEE domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000405
Physical Location & Seq
Reverse (-)
10249621 .. 10252667
3047 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1118100.v1.1.491

Sequence Viewer

Length: 1182 bp
ATGGCGATGGAGTTCAGGTCCTACAAGGACGACGCGTGGTACGACGTGCGTATCGAGACGGAGGGCGGCAATGGCTGCGGTGGCGGCCGCCTGAGACTGAGAATCAAGTTCCTCGGGTTCCACGACGACCAGGACGAGTTCGTCGACGCCAACAACTTCAGGTCGGTGAGTGACGTGGCCGAGATGAGGTCTCGGTTCAGGTCCATGTCGGCTCAGCTTCAGGACTCGGAGTGCTCTCAGGTGAACAGGGGGATGATCGTCTGCGCCGCTCACTCCGCTCTCCCCGACGATCGCCGCTTCTACGACGCCGTCGTGGATGACGTTGTGCATAGTAAGCATGTGTTTGCAAACGGAGAAGAGCAATGCACTTGCACCTTCATCCTCTCATGGCAGCACGGTCCGTTCGCCAGGACGCTGACCGCCGAAGCTCTCGAGCACATTTGCAGAGTCCAGCCTCCGGTTCCTGATAACGAACTGAATCCACTGCTCATCTCTTTTCTGAACTTGGTAAGGAAGAGAATTGAAGCAACTGGCTTTTCGGATTCGAATGTGAGTTCTGCTGAAGCTGCTGCTGCCAGCAATGGCCGAAATGGCCCACCCGGCTTTCCTCAACGCCGAAATCAGGAAACAAGGCCTTCTAGGTTGTCCTCAGGTCATGTCAAAGGACATGACGTAGATATCGGAGGGGTGCCGCATATGATCATTATAGACAATCTTGAGAAGGGGTTATCGCCATCAACAATTATGGAGTTTATTCATCAACAACTTTCAATCTCATGTCAAGCATTTGTTTCACCAAGTAAGTTGTTAGAGATATATGCACGAGGAGGCATTCTGTTGCACAGCAAAGCGAACTTTGACAAGTTATTGGTCTTTTTGGAGAATCCAGATCACATCATCATTTCCTCGGGAGGAAGACCTTGGTTCGTGACTGAAAAATTACCGTTACATGGCTCACTAAAGGCAGTGACTGAAACATTTGCGCTTGCATCTCAGAAAGTCTTACAGAGCAGAACCGGAACTTGCAATGACTTGAAGGTGGTTGTTTCTGGTACTAAAGAGTATGAGCAGGCTAAGCAGCTACGTGATTTGTTTAAGCAATTTGCCAAGCATCAATGCATGCTTCAGCAGAGATTAGTTATTGAAGAGGGAAGGATCTTGCAGCTGTCTGATCCGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAWADEE

Protein Analysis

394

Amino Acids

43.87

Weight (kDa)

6.4

Isoelectric Point (pI)

55.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAWADEE PF16719 2 - 148 5.4e-33 SAWADEE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000405)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25330
fragaria_vesca FvH4_2g12920 FvH4_2g12920 FvH4_2g12920 FvH4_2g12920 FvH4_3g17720 FvH4_3g17720 FvH4_3g20410 FvH4_3g20410 FvH4_5g23730 FvH4_5g23730 FvH4_5g23730 FvH4_6g40510 FvH4_6g40520 FvH4_6g40530 FvH4_6g40530
malus_domestica MD09G1128800.v1.1 MD09G1128900.v1.1 MD09G1129100.v1.1 MD17G1118100.v1.1
prunus_persica Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196500_v2.0.a1 Prupe.3G196500_v2.0.a1
pyrus_communis pycom09g05230 pycom09g05240 pycom10g00180 pycom17g10860
rosa_chinensis RchiOBHm_Chr2g0133241 RchiOBHm_Chr2g0133311 RchiOBHm_Chr2g0155531 RchiOBHm_Chr2g0155771 RchiOBHm_Chr2g0155781 RchiOBHm_Chr2g0155791 RchiOBHm_Chr5g0029431 RchiOBHm_Chr5g0034301 RchiOBHm_Chr7g0213061
rosa_laevigata RLG00000002835 RLG00000019323 RLG00000020863 RLG00000020864 RLG00000033165 RLG00000033538
rosa_multiflora Rmu_co8060268.1_g000001 Rmu_sc0000062.1_g000021 Rmu_sc0001121.1_g000020 Rmu_sc0001446.1_g000013 Rmu_sc0002712.1_g000021 Rmu_sc0003417.1_g000005 Rmu_sc0023254.1_g000004 Rmu_sc0024719.1_g000001 Rmu_sc0033434.1_g000002
rosa_roxburghii Rroxscaffold_1G00045970 Rroxscaffold_2G00093480 Rroxscaffold_2G00093490 Rroxscaffold_2G00093500 Rroxscaffold_2G00111280 Rroxscaffold_3G00246280 Rroxscaffold_7G00195910
rosa_rugosa Rorug02G0310900 Rorug02G0449800 Rorug02G0449900 Rorug04G0061300 Rorug05G0145100 Rorug06G0068700 Rorug07G0139100
rosa_samantha Rh2AG363400 Rh2AG515900 Rh2AG516000 Rh2BG369100 Rh2BG525000 Rh2BG526900 Rh2BG527000 Rh2CG346700 Rh2CG500900 Rh2CG501000 Rh2DG386100 Rh2DG535900 Rh2DG536000 Rh5AG236700 Rh5BG204800 Rh5BG237200 Rh5CG226800 Rh5CG267000 Rh5DG208400 Rh5DG244700 Rh7AG270400 Rh7AG270500 Rh7BG266000 Rh7CG289700 Rh7CG289800 Rh7DG278700
rosa_wichuraiana Rw2G029570 Rw2G042430 Rw2G042440 Rw5G021290 Rw7G023500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 140
AccB1I GGYRCC 1 cut(s) 688
AccBSI CCGCTC 2 cut(s) 269, 278
AccI GTMKAC 1 cut(s) 144
AccII CGCG 1 cut(s) 35
AciI CCGC 9 cut(s) 66, 78, 84, 88, 267, 276, 295, 420, 692
AclWI GGATC 2 cut(s) 1163, 1166
AcoI YGGCCR 3 cut(s) 85, 177, 583
AcuI CTGAAG 4 cut(s) 142, 203, 582, 1109
AcyI GRCGYC 2 cut(s) 147, 306
AfaI GTAC 2 cut(s) 41, 1054
AfiI CCNNNNNNNGG 4 cut(s) 186, 457, 622, 950
AflIII ACRYGT 1 cut(s) 33
AgsI TTSAA 4 cut(s) 524, 771, 1036, 1145
AjiI CACGTC 2 cut(s) 46, 175
AjnI CCWGG 2 cut(s) 129, 407
AluBI AGCT 5 cut(s) 217, 428, 566, 1081, 1165
AluI AGCT 5 cut(s) 217, 428, 566, 1081, 1165
Alw21I GWGCWC 2 cut(s) 236, 438
Alw26I GTCTC 3 cut(s) 50, 88, 195
AlwI GGATC 2 cut(s) 1163, 1166
AlwNI CAGNNNCTG 1 cut(s) 971
Ama87I CYCGRG 3 cut(s) 113, 431, 907
AoxI GGCC 5 cut(s) 85, 177, 583, 592, 632
ApeKI GCWGC 7 cut(s) 75, 391, 566, 569, 572, 1078, 1162
AspLEI GCGC 2 cut(s) 266, 985
AspS9I GGNCC 4 cut(s) 18, 201, 398, 593
AsuC2I CCSGG 1 cut(s) 600
AsuHPI GGTGA 3 cut(s) 178, 253, 786
AsuII TTCGAA 1 cut(s) 545
AvaI CYCGRG 3 cut(s) 113, 431, 907
AvaII GGWCC 3 cut(s) 18, 201, 398
AxyI CCTNAGG 1 cut(s) 649
BaeI ACNNNNGTAYC 2 cut(s) 34, 67
BanI GGYRCC 1 cut(s) 688
BauI CACGAG 1 cut(s) 822
BbsI GAAGAC 1 cut(s) 922
Bbv12I GWGCWC 2 cut(s) 236, 438
BbvI GCAGC 7 cut(s) 62, 403, 553, 556, 559, 1090, 1174
BccI CCATC 1 cut(s) 742
BceAI ACGGC 1 cut(s) 293
BciT130I CCWGG 2 cut(s) 131, 409
BclI TGATCA 1 cut(s) 699
BcnI CCSGG 1 cut(s) 600
BcoDI GTCTC 3 cut(s) 50, 88, 195
BfaI CTAG 1 cut(s) 639
BglI GCCNNNNNGGC 2 cut(s) 591, 600
BlpI GCTNAGC 2 cut(s) 213, 1074
Bme1390I CCNGG 3 cut(s) 131, 409, 600
Bme18I GGWCC 3 cut(s) 18, 201, 398
BmeT110I CYCGRG 3 cut(s) 113, 431, 907
BmgBI CACGTC 2 cut(s) 46, 175
BmgT120I GGNCC 4 cut(s) 18, 201, 398, 593
BmiI GGNNCC 3 cut(s) 119, 462, 690
BmrFI CCNGG 3 cut(s) 131, 409, 600
BmsI GCATC 2 cut(s) 998, 1120
BpiI GAAGAC 1 cut(s) 922
Bpu1102I GCTNAGC 2 cut(s) 213, 1074
Bpu14I TTCGAA 1 cut(s) 545
BpuEI CTTGAG 1 cut(s) 737
BpuMI CCSGG 1 cut(s) 600
BsaAI YACGTR 1 cut(s) 1085
BsaHI GRCGYC 2 cut(s) 147, 306
BsaI GGTCTC 1 cut(s) 195
BsaJI CCNNGG 3 cut(s) 112, 906, 920
BsaWI WCCGGW 3 cut(s) 457, 1016, 1174
BsaXI ACNNNNNCTCC 1 cut(s) 32
Bsc4I CCNNNNNNNGG 4 cut(s) 186, 457, 622, 950
Bse1I ACTGG 1 cut(s) 535
Bse21I CCTNAGG 1 cut(s) 649
Bse3DI GCAATG 4 cut(s) 76, 368, 586, 1033
BseBI CCWGG 2 cut(s) 131, 409
BseDI CCNNGG 3 cut(s) 112, 906, 920
BseGI GGATG 3 cut(s) 258, 322, 378
BseLI CCNNNNNNNGG 4 cut(s) 186, 457, 622, 950
BseMI GCAATG 4 cut(s) 76, 368, 586, 1033
BseMII CTCAG 6 cut(s) 83, 89, 227, 251, 663, 1007
BseNI ACTGG 1 cut(s) 535
BseRI GAGGAG 1 cut(s) 840
BseX3I CGGCCG 1 cut(s) 85
BseXI GCAGC 7 cut(s) 62, 403, 553, 556, 559, 1090, 1174
Bsh1236I CGCG 1 cut(s) 35
Bsh1285I CGRYCG 2 cut(s) 88, 292
BshFI GGCC 5 cut(s) 87, 179, 585, 594, 634
BshNI GGYRCC 1 cut(s) 688
BsiEI CGRYCG 2 cut(s) 88, 292
BsiHKAI GWGCWC 2 cut(s) 236, 438
BsiHKCI CYCGRG 3 cut(s) 113, 431, 907
BsiSI CCGG 4 cut(s) 458, 600, 1017, 1175
BslI CCNNNNNNNGG 4 cut(s) 186, 457, 622, 950
BsmAI GTCTC 3 cut(s) 50, 88, 195
BsmBI CGTCTC 1 cut(s) 50
BsmI GAATGC 1 cut(s) 831
BsnI GGCC 5 cut(s) 87, 179, 585, 594, 634
Bso31I GGTCTC 1 cut(s) 195
BsoBI CYCGRG 3 cut(s) 113, 431, 907
Bsp119I TTCGAA 1 cut(s) 545
Bsp1286I GDGCHC 2 cut(s) 236, 438
Bsp143I GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
Bsp1720I GCTNAGC 2 cut(s) 213, 1074
BspACI CCGC 9 cut(s) 66, 78, 84, 88, 267, 276, 295, 420, 692
BspANI GGCC 5 cut(s) 87, 179, 585, 594, 634
BspCNI CTCAG 6 cut(s) 84, 90, 226, 250, 662, 1006
BspFNI CGCG 1 cut(s) 35
BspLI GGNNCC 3 cut(s) 119, 462, 690
BspPI GGATC 2 cut(s) 1163, 1166
BspQI GCTCTTC 1 cut(s) 351
BspT104I TTCGAA 1 cut(s) 545
BspT107I GGYRCC 1 cut(s) 688
BspTNI GGTCTC 1 cut(s) 195
BsrBI CCGCTC 2 cut(s) 269, 278
BsrDI GCAATG 4 cut(s) 76, 368, 586, 1033
BsrI ACTGG 1 cut(s) 535
BssECI CCNNGG 3 cut(s) 112, 906, 920
BssMI GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
BssNI GRCGYC 2 cut(s) 147, 306
BssSI CACGAG 1 cut(s) 822
BssT1I CCWWGG 1 cut(s) 920
Bst2BI CACGAG 1 cut(s) 822
Bst2UI CCWGG 2 cut(s) 131, 409
Bst4CI ACNGT 2 cut(s) 398, 945
Bst6I CTCTTC 3 cut(s) 351, 509, 1140
BstACI GRCGYC 2 cut(s) 147, 306
BstAPI GCANNNNNTGC 1 cut(s) 75
BstBAI YACGTR 1 cut(s) 1085
BstBI TTCGAA 1 cut(s) 545
BstC8I GCNNGC 4 cut(s) 577, 987, 1071, 1121
BstDEI CTNAG 7 cut(s) 92, 98, 213, 237, 649, 993, 1074
BstF5I GGATG 3 cut(s) 258, 322, 378
BstFNI CGCG 1 cut(s) 35
BstHHI GCGC 2 cut(s) 266, 985
BstKTI GATC 6 cut(s) 258, 292, 702, 892, 1158, 1174
BstMAI GTCTC 3 cut(s) 50, 88, 195
BstMBI GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
BstMCI CGRYCG 2 cut(s) 88, 292
BstNI CCWGG 2 cut(s) 131, 409
BstNSI RCATGY 2 cut(s) 341, 1123
BstSCI CCNGG 3 cut(s) 129, 407, 598
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 7 cut(s) 62, 403, 553, 556, 559, 1090, 1174
BstV2I GAAGAC 1 cut(s) 922
BstX2I RGATCY 1 cut(s) 1155
BstYI RGATCY 1 cut(s) 1155
BstZI CGGCCG 1 cut(s) 85
Bsu36I CCTNAGG 1 cut(s) 649
BsuRI GGCC 5 cut(s) 87, 179, 585, 594, 634
BtgZI GCGATG 1 cut(s) 20
BtrI CACGTC 2 cut(s) 46, 175
BtsCI GGATG 3 cut(s) 258, 322, 378
BtsI GCAGTG 2 cut(s) 482, 972
BtsIMutI CAGTG 2 cut(s) 482, 972
Cac8I GCNNGC 4 cut(s) 577, 987, 1071, 1121
CaiI CAGNNNCTG 1 cut(s) 971
CciNI GCGGCCGC 1 cut(s) 85
CfoI GCGC 2 cut(s) 266, 985
Cfr13I GGNCC 4 cut(s) 18, 201, 398, 593
CpoI CGGWCCG 1 cut(s) 398
CseI GACGC 4 cut(s) 41, 155, 314, 421
Csp6I GTAC 2 cut(s) 40, 1053
CspI CGGWCCG 1 cut(s) 398
CviAII CATG 8 cut(s) 205, 338, 387, 656, 668, 777, 950, 1120
CviQI GTAC 2 cut(s) 40, 1053
DdeI CTNAG 7 cut(s) 92, 98, 213, 237, 649, 993, 1074
DpnI GATC 6 cut(s) 257, 291, 701, 891, 1157, 1173
DpnII GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
DrdI GACNNNNNNGTC 1 cut(s) 140
DseDI GACNNNNNNGTC 1 cut(s) 140
EaeI YGGCCR 3 cut(s) 85, 177, 583
EagI CGGCCG 1 cut(s) 85
Eam1104I CTCTTC 3 cut(s) 351, 509, 1140
EarI CTCTTC 3 cut(s) 351, 509, 1140
EclXI CGGCCG 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 920
Eco147I AGGCCT 1 cut(s) 634
Eco31I GGTCTC 1 cut(s) 195
Eco32I GATATC 1 cut(s) 679
Eco47I GGWCC 3 cut(s) 18, 201, 398
Eco52I CGGCCG 1 cut(s) 85
Eco57I CTGAAG 4 cut(s) 142, 203, 582, 1109
Eco81I CCTNAGG 1 cut(s) 649
Eco88I CYCGRG 3 cut(s) 113, 431, 907
EcoO109I RGGNCCY 1 cut(s) 18
EcoRII CCWGG 2 cut(s) 129, 407
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 1 cut(s) 920
EcoT22I ATGCAT 1 cut(s) 1121
ErhI CCWWGG 1 cut(s) 920
Esp3I CGTCTC 1 cut(s) 50
FaeI CATG 8 cut(s) 208, 341, 390, 659, 671, 780, 953, 1123
FatI CATG 8 cut(s) 204, 337, 386, 655, 667, 776, 949, 1119
FauNDI CATATG 1 cut(s) 696
FbaI TGATCA 1 cut(s) 699
FblI GTMKAC 1 cut(s) 144
FokI GGATG 3 cut(s) 265, 329, 365
FspBI CTAG 1 cut(s) 639
GlaI GCGC 2 cut(s) 265, 984
HaeIII GGCC 5 cut(s) 87, 179, 585, 594, 634
HapII CCGG 4 cut(s) 458, 600, 1017, 1175
HgaI GACGC 4 cut(s) 41, 155, 314, 421
HhaI GCGC 2 cut(s) 266, 985
Hin1I GRCGYC 2 cut(s) 147, 306
Hin1II CATG 8 cut(s) 208, 341, 390, 659, 671, 780, 953, 1123
Hin6I GCGC 2 cut(s) 264, 983
HinP1I GCGC 2 cut(s) 264, 983
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HinfI GANTC 6 cut(s) 102, 224, 447, 478, 542, 883
HpaII CCGG 4 cut(s) 458, 600, 1017, 1175
HphI GGTGA 3 cut(s) 178, 253, 786
Hpy166II GTNNAC 2 cut(s) 145, 244
Hpy188I TCNGA 6 cut(s) 229, 501, 541, 683, 996, 1171
Hpy188III TCNNGA 9 cut(s) 55, 221, 431, 464, 623, 716, 887, 909, 928
Hpy8I GTNNAC 2 cut(s) 145, 244
Hpy99I CGWCG 8 cut(s) 35, 47, 128, 146, 149, 290, 308, 314
HpyAV CCTTC 5 cut(s) 385, 645, 715, 1030, 1146
HpyCH4III ACNGT 2 cut(s) 398, 945
HpyCH4IV ACGT 5 cut(s) 45, 174, 321, 672, 1084
HpyF3I CTNAG 7 cut(s) 92, 98, 213, 237, 649, 993, 1074
HpySE526I ACGT 5 cut(s) 45, 174, 321, 672, 1084
Hsp92I GRCGYC 2 cut(s) 147, 306
Hsp92II CATG 8 cut(s) 208, 341, 390, 659, 671, 780, 953, 1123
HspAI GCGC 2 cut(s) 264, 983
Ksp22I TGATCA 1 cut(s) 699
Kzo9I GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
LguI GCTCTTC 1 cut(s) 351
Lsp1109I GCAGC 7 cut(s) 62, 403, 553, 556, 559, 1090, 1174
LweI GCATC 2 cut(s) 998, 1120
MaeI CTAG 1 cut(s) 639
MaeII ACGT 5 cut(s) 45, 174, 321, 672, 1084
MaeIII GTNAC 4 cut(s) 170, 928, 945, 967
MalI GATC 6 cut(s) 257, 291, 701, 891, 1157, 1173
MbiI CCGCTC 2 cut(s) 269, 278
MboI GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
MboII GAAGA 4 cut(s) 368, 526, 927, 1157
MflI RGATCY 1 cut(s) 1155
MhlI GDGCHC 2 cut(s) 236, 438
MluCI AATT 4 cut(s) 519, 741, 938, 1100
MluI ACGCGT 1 cut(s) 33
MlyI GAGTC 2 cut(s) 218, 456
Mph1103I ATGCAT 1 cut(s) 1121
MseI TTAA 1 cut(s) 1095
MspA1I CMGCKG 1 cut(s) 1165
MspI CCGG 4 cut(s) 458, 600, 1017, 1175
MspR9I CCNGG 3 cut(s) 131, 409, 600
Mva1269I GAATGC 1 cut(s) 831
MvaI CCWGG 2 cut(s) 131, 409
MvnI CGCG 1 cut(s) 35
NciI CCSGG 1 cut(s) 600
NdeI CATATG 1 cut(s) 696
NdeII GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
NlaIII CATG 8 cut(s) 208, 341, 390, 659, 671, 780, 953, 1123
NlaIV GGNNCC 3 cut(s) 119, 462, 690
NmeAIII GCCGAG 1 cut(s) 205
NmuCI GTSAC 3 cut(s) 170, 928, 967
NotI GCGGCCGC 1 cut(s) 85
NsiI ATGCAT 1 cut(s) 1121
NspI RCATGY 2 cut(s) 341, 1123
NspV TTCGAA 1 cut(s) 545
PaeI GCATGC 1 cut(s) 1123
PaeR7I CTCGAG 1 cut(s) 431
PceI AGGCCT 1 cut(s) 634
PciSI GCTCTTC 1 cut(s) 351
PcsI WCGNNNNNNNCGW 7 cut(s) 39, 51, 120, 132, 141, 309, 318
PctI GAATGC 1 cut(s) 831
PfeI GAWTC 4 cut(s) 102, 478, 542, 883
PflFI GACNNNGTC 1 cut(s) 308
Ple19I CGATCG 1 cut(s) 292
PleI GAGTC 2 cut(s) 218, 455
PpsI GAGTC 2 cut(s) 218, 455
Ppu21I YACGTR 1 cut(s) 1085
PpuMI RGGWCCY 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 18
Psp6I CCWGG 2 cut(s) 129, 407
PspGI CCWGG 2 cut(s) 129, 407
PspN4I GGNNCC 3 cut(s) 119, 462, 690
PspPI GGNCC 4 cut(s) 18, 201, 398, 593
PspPPI RGGWCCY 1 cut(s) 18
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 1 cut(s) 1155
PsyI GACNNNGTC 1 cut(s) 308
PvuI CGATCG 1 cut(s) 292
PvuII CAGCTG 1 cut(s) 1165
RsaI GTAC 2 cut(s) 41, 1054
RsaNI GTAC 2 cut(s) 40, 1053
Rsr2I CGGWCCG 1 cut(s) 398
RsrII CGGWCCG 1 cut(s) 398
SalI GTCGAC 1 cut(s) 143
SapI GCTCTTC 1 cut(s) 351
SaqAI TTAA 1 cut(s) 1095
Sau3AI GATC 6 cut(s) 255, 289, 699, 889, 1155, 1171
Sau96I GGNCC 4 cut(s) 18, 201, 398, 593
SchI GAGTC 2 cut(s) 218, 456
ScrFI CCNGG 3 cut(s) 131, 409, 600
SduI GDGCHC 2 cut(s) 236, 438
SfaNI GCATC 2 cut(s) 998, 1120
SfiI GGCCNNNNNGGCC 1 cut(s) 591
Sfr274I CTCGAG 1 cut(s) 431
SfuI TTCGAA 1 cut(s) 545
SgrDI CGTCGACG 1 cut(s) 143
SinI GGWCC 3 cut(s) 18, 201, 398
SlaI CTCGAG 1 cut(s) 431
SmlI CTYRAG 2 cut(s) 431, 716
SmoI CTYRAG 2 cut(s) 431, 716
SphI GCATGC 1 cut(s) 1123
Sse9I AATT 4 cut(s) 519, 741, 938, 1100
SseBI AGGCCT 1 cut(s) 634
SsiI CCGC 9 cut(s) 66, 78, 84, 88, 267, 276, 295, 420, 692
SspMI CTAG 1 cut(s) 639
StuI AGGCCT 1 cut(s) 634
StyD4I CCNGG 3 cut(s) 129, 407, 598
StyI CCWWGG 1 cut(s) 920
TaaI ACNGT 2 cut(s) 398, 945
TaiI ACGT 5 cut(s) 48, 177, 324, 675, 1087
TaqI TCGA 4 cut(s) 54, 144, 432, 545
TasI AATT 4 cut(s) 519, 741, 938, 1100
TauI GCSGC 6 cut(s) 69, 87, 90, 269, 297, 694
TfiI GAWTC 4 cut(s) 102, 478, 542, 883
Tru1I TTAA 1 cut(s) 1095
Tru9I TTAA 1 cut(s) 1095
TscAI CASTG 2 cut(s) 489, 972
TseFI GTSAC 3 cut(s) 170, 928, 967
TseI GCWGC 7 cut(s) 75, 391, 566, 569, 572, 1078, 1162
Tsp45I GTSAC 3 cut(s) 170, 928, 967
TspDTI ATGAA 2 cut(s) 367, 746
TspGWI ACGGA 3 cut(s) 74, 366, 390
TspRI CASTG 2 cut(s) 489, 972
Tth111I GACNNNGTC 1 cut(s) 308
VpaK11BI GGWCC 3 cut(s) 18, 201, 398
XceI RCATGY 2 cut(s) 341, 1123
XhoI CTCGAG 1 cut(s) 431
XmiI GTMKAC 1 cut(s) 144
XspI CTAG 1 cut(s) 639
Zsp2I ATGCAT 1 cut(s) 1121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.