Rroxscaffold_1G00045970

SAWADEE domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000405
Physical Location & Seq
Forward (+)
65109133 .. 65111985
2853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00045970.1

Sequence Viewer

Length: 1227 bp
ATGGCGTTAGAGTTCAGGTCCCACAAGGACGACGCCTGGTACGACGCCCGCCTATTCACGGAGGACACCGGCGCCGGTCTCCGCCTCAGAATCACCTTCGCCAACTTCTCCGACGCCCACGACGAGTTCGTCGCCGCCAACGACCTGGCCGCCCTCCCAGACCTCGACGCATTGCGCTCCCGCGTCCGCCGCCTCTCCCTCCAGCTCCAGGACTCCGAGTGCTCCTCCGTCGACAGAGGCCTCCTCGTCTGCGCCGCCCGCTCCGTCCACCCCGACGATCGCCGCTTCTTCGACGCCTTCGTCGACGGGGTTGTGCATAAGGAGCATGGGGTTGGGGAGGGAGGGCAGGAGGAGTGCACATGCAGCTTTATTCTGGAGTGGATTCACGGCCCGCAAGTTGGGACTCTCAGTGTGGTGGCGCTTGAGAATATTTGCAGAGTCCGGCTGCCGGCGGTGGACGAAGAGATTGACCCGGCGTTGACCGCTTTTGTTAAGGCGGTCAAGGAGAAGATGATTGAGAACACTTTTTCGAATTCGATTGAGAATTCTGGGGACAAAGGTGGTGGTGGTGGTGATTGTGACAATGAGTCTAGTAGTAGGCACAAGGGAAGCTTTTCTCAGCTGAACAAGGATACAAGCCGTGTCAGGCAATCCTTAACTCCAAGCTCGTCTTCCAAAGAAGCAGAGATAATGGACAATATTTCTGCAAGGGATGGACATGACATGGATATTGGAGGGCTTCCTCATATGATCTTTGTTGAGAATCTTGAGAAGGGGATCTCATCATTTACAATTATGGAATTCATATACCAGCAACTTTCTATATCATGTCAAGTATTTGTTTCTCCAAGTAAGCAATCAGAGGTGTATACAAGAGGAACCATCATGTTGAACAGCAAAAAGAACCTCGACAAGTTATCTGAATTTTTGGGGAGTCCAGATCACATCATCATCTCGTCAAGAGGAAGGCCTTGGGTTCTGACTGAGAAAATTCCCATGGATGGCACAATAAGGGCATCGATTGAAACCTTTAAGCGTACATCTCAGGCAACATTAGAGTGTAAAACTCCAAGTAGCAATGAGGTGAAGGTTGTAATGTCTGGGAGTCCAGAATACACTAAAGCTAAGCAGCTGAAGGATTTGTTCAAGGAGTTTACTAATCATCAGTGTGGACTTCATCAGAGGTTGCTCCAGGAAGAGGGAAAAATCATGTGGCTAGATATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAWADEE

Protein Analysis

408

Amino Acids

45.42

Weight (kDa)

5.39

Isoelectric Point (pI)

57.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAWADEE PF16719 2 - 145 1.2e-32 SAWADEE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000405)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25330
fragaria_vesca FvH4_2g12920 FvH4_2g12920 FvH4_2g12920 FvH4_2g12920 FvH4_3g17720 FvH4_3g17720 FvH4_3g20410 FvH4_3g20410 FvH4_5g23730 FvH4_5g23730 FvH4_5g23730 FvH4_6g40510 FvH4_6g40520 FvH4_6g40530 FvH4_6g40530
malus_domestica MD09G1128800.v1.1 MD09G1128900.v1.1 MD09G1129100.v1.1 MD17G1118100.v1.1
prunus_persica Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196500_v2.0.a1 Prupe.3G196500_v2.0.a1
pyrus_communis pycom09g05230 pycom09g05240 pycom10g00180 pycom17g10860
rosa_chinensis RchiOBHm_Chr2g0133241 RchiOBHm_Chr2g0133311 RchiOBHm_Chr2g0155531 RchiOBHm_Chr2g0155771 RchiOBHm_Chr2g0155781 RchiOBHm_Chr2g0155791 RchiOBHm_Chr5g0029431 RchiOBHm_Chr5g0034301 RchiOBHm_Chr7g0213061
rosa_laevigata RLG00000002835 RLG00000019323 RLG00000020863 RLG00000020864 RLG00000033165 RLG00000033538
rosa_multiflora Rmu_co8060268.1_g000001 Rmu_sc0000062.1_g000021 Rmu_sc0001121.1_g000020 Rmu_sc0001446.1_g000013 Rmu_sc0002712.1_g000021 Rmu_sc0003417.1_g000005 Rmu_sc0023254.1_g000004 Rmu_sc0024719.1_g000001 Rmu_sc0033434.1_g000002
rosa_roxburghii Rroxscaffold_1G00045970 Rroxscaffold_2G00093480 Rroxscaffold_2G00093490 Rroxscaffold_2G00093500 Rroxscaffold_2G00111280 Rroxscaffold_3G00246280 Rroxscaffold_7G00195910
rosa_rugosa Rorug02G0310900 Rorug02G0449800 Rorug02G0449900 Rorug04G0061300 Rorug05G0145100 Rorug06G0068700 Rorug07G0139100
rosa_samantha Rh2AG363400 Rh2AG515900 Rh2AG516000 Rh2BG369100 Rh2BG525000 Rh2BG526900 Rh2BG527000 Rh2CG346700 Rh2CG500900 Rh2CG501000 Rh2DG386100 Rh2DG535900 Rh2DG536000 Rh5AG236700 Rh5BG204800 Rh5BG237200 Rh5CG226800 Rh5CG267000 Rh5DG208400 Rh5DG244700 Rh7AG270400 Rh7AG270500 Rh7BG266000 Rh7CG289700 Rh7CG289800 Rh7DG278700
rosa_wichuraiana Rw2G029570 Rw2G042430 Rw2G042440 Rw5G021290 Rw7G023500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 128, 299
AccB1I GGYRCC 1 cut(s) 71
AccBSI CCGCTC 1 cut(s) 261
AccI GTMKAC 3 cut(s) 231, 303, 869
AccII CGCG 1 cut(s) 183
AclWI GGATC 1 cut(s) 785
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 5 cut(s) 532, 544, 800, 923, 990
AcuI CTGAAG 1 cut(s) 1154
AcyI GRCGYC 5 cut(s) 33, 45, 72, 114, 294
AfaI GTAC 2 cut(s) 41, 1039
AfiI CCNNNNNNNGG 6 cut(s) 58, 208, 398, 448, 1001, 1198
AgsI TTSAA 3 cut(s) 892, 1025, 1147
AhdI GACNNNNNGTC 1 cut(s) 586
AjnI CCWGG 4 cut(s) 35, 144, 207, 1191
AjuI GAANNNNNNNTTGG 2 cut(s) 655, 687
AluBI AGCT 7 cut(s) 205, 366, 612, 622, 666, 1124, 1132
AluI AGCT 7 cut(s) 205, 366, 612, 622, 666, 1124, 1132
Alw21I GWGCWC 2 cut(s) 224, 359
Alw26I GTCTC 1 cut(s) 83
Alw44I GTGCAC 1 cut(s) 355
AlwI GGATC 1 cut(s) 785
AoxI GGCC 4 cut(s) 147, 238, 388, 968
ApaLI GTGCAC 1 cut(s) 355
ApeKI GCWGC 3 cut(s) 363, 445, 1129
ApoI RAATTY 5 cut(s) 532, 544, 800, 923, 990
Asp700I GAANNNNTTC 1 cut(s) 613
AspLEI GCGC 4 cut(s) 74, 177, 254, 421
AspS9I GGNCC 2 cut(s) 18, 389
AsuC2I CCSGG 1 cut(s) 473
AsuHPI GGTGA 3 cut(s) 85, 584, 1096
AsuII TTCGAA 1 cut(s) 530
AvaII GGWCC 1 cut(s) 18
BaeGI GKGCMC 1 cut(s) 359
BanI GGYRCC 1 cut(s) 71
BbsI GAAGAC 1 cut(s) 663
Bbv12I GWGCWC 2 cut(s) 224, 359
BbvI GCAGC 3 cut(s) 375, 432, 1141
BccI CCATC 3 cut(s) 707, 890, 995
BceAI ACGGC 2 cut(s) 403, 624
BciT130I CCWGG 4 cut(s) 37, 146, 209, 1193
BciVI GTATCC 1 cut(s) 625
BcnI CCSGG 1 cut(s) 473
BcoDI GTCTC 1 cut(s) 83
BfaI CTAG 2 cut(s) 591, 1217
BfoI RGCGCY 2 cut(s) 75, 422
BfuI GTATCC 1 cut(s) 625
BisI GCNGC 8 cut(s) 135, 150, 190, 255, 283, 364, 446, 1130
BlpI GCTNAGC 1 cut(s) 1125
BlsI GCNGC 8 cut(s) 136, 151, 191, 256, 284, 365, 447, 1131
Bme1390I CCNGG 5 cut(s) 37, 146, 209, 473, 1193
Bme18I GGWCC 1 cut(s) 18
BmeRI GACNNNNNGTC 1 cut(s) 586
BmgT120I GGNCC 2 cut(s) 18, 389
BmiI GGNNCC 3 cut(s) 20, 73, 880
BmrFI CCNGG 5 cut(s) 37, 146, 209, 473, 1193
BmsI GCATC 1 cut(s) 1025
BpiI GAAGAC 1 cut(s) 663
BplI GAGNNNNNCTC 4 cut(s) 209, 241, 228, 260
BpmI CTGGAG 4 cut(s) 185, 191, 395, 1175
Bpu1102I GCTNAGC 1 cut(s) 1125
Bpu14I TTCGAA 1 cut(s) 530
BpuEI CTTGAG 2 cut(s) 443, 788
BpuMI CCSGG 1 cut(s) 473
Bsa29I ATCGAT 1 cut(s) 1019
BsaHI GRCGYC 5 cut(s) 33, 45, 72, 114, 294
BsaI GGTCTC 1 cut(s) 83
BsaJI CCNNGG 2 cut(s) 971, 996
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 208, 398, 448, 1001, 1198
Bse118I RCCGGY 3 cut(s) 68, 74, 448
Bse3DI GCAATG 2 cut(s) 170, 1084
BseBI CCWGG 4 cut(s) 37, 146, 209, 1193
BseCI ATCGAT 1 cut(s) 1019
BseDI CCNNGG 2 cut(s) 971, 996
BseGI GGATG 2 cut(s) 718, 1006
BseLI CCNNNNNNNGG 6 cut(s) 58, 208, 398, 448, 1001, 1198
BseMI GCAATG 2 cut(s) 170, 1084
BseMII CTCAG 5 cut(s) 100, 421, 632, 975, 1058
BseRI GAGGAG 3 cut(s) 214, 233, 365
BseSI GKGCMC 1 cut(s) 359
BseXI GCAGC 3 cut(s) 375, 432, 1141
Bsh1236I CGCG 1 cut(s) 183
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 4 cut(s) 149, 240, 390, 970
BshNI GGYRCC 1 cut(s) 71
BshVI ATCGAT 1 cut(s) 1019
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 2 cut(s) 224, 359
BsiSI CCGG 5 cut(s) 69, 75, 442, 449, 473
BslFI GGGAC 3 cut(s) 4, 415, 566
BslI CCNNNNNNNGG 6 cut(s) 58, 208, 398, 448, 1001, 1198
BsmAI GTCTC 1 cut(s) 83
BsmFI GGGAC 3 cut(s) 4, 415, 566
BsnI GGCC 4 cut(s) 149, 240, 390, 970
Bso31I GGTCTC 1 cut(s) 83
Bsp119I TTCGAA 1 cut(s) 530
Bsp1286I GDGCHC 2 cut(s) 224, 359
Bsp143I GATC 4 cut(s) 277, 750, 777, 940
Bsp1720I GCTNAGC 1 cut(s) 1125
Bsp19I CCATGG 1 cut(s) 996
BspANI GGCC 4 cut(s) 149, 240, 390, 970
BspCNI CTCAG 5 cut(s) 99, 420, 631, 976, 1057
BspDI ATCGAT 1 cut(s) 1019
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 3 cut(s) 20, 73, 880
BspPI GGATC 1 cut(s) 785
BspT104I TTCGAA 1 cut(s) 530
BspT107I GGYRCC 1 cut(s) 71
BspTNI GGTCTC 1 cut(s) 83
BsrBI CCGCTC 1 cut(s) 261
BsrDI GCAATG 2 cut(s) 170, 1084
BsrFI RCCGGY 3 cut(s) 68, 74, 448
BssAI RCCGGY 3 cut(s) 68, 74, 448
BssECI CCNNGG 2 cut(s) 971, 996
BssMI GATC 4 cut(s) 277, 750, 777, 940
BssNAI GTATAC 1 cut(s) 870
BssNI GRCGYC 5 cut(s) 33, 45, 72, 114, 294
BssT1I CCWWGG 2 cut(s) 971, 996
Bst1107I GTATAC 1 cut(s) 870
Bst2UI CCWGG 4 cut(s) 37, 146, 209, 1193
Bst6I CTCTTC 2 cut(s) 456, 1191
BstACI GRCGYC 5 cut(s) 33, 45, 72, 114, 294
BstBI TTCGAA 1 cut(s) 530
BstC8I GCNNGC 4 cut(s) 49, 259, 392, 450
BstDEI CTNAG 6 cut(s) 86, 407, 618, 984, 1044, 1125
BstDSI CCRYGG 1 cut(s) 996
BstF5I GGATG 2 cut(s) 718, 1006
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 2 cut(s) 75, 422
BstHHI GCGC 4 cut(s) 74, 177, 254, 421
BstKTI GATC 4 cut(s) 280, 753, 780, 943
BstMAI GTCTC 1 cut(s) 83
BstMBI GATC 4 cut(s) 277, 750, 777, 940
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 5 cut(s) 189, 258, 322, 363, 482
BstNI CCWGG 4 cut(s) 37, 146, 209, 1193
BstNSI RCATGY 1 cut(s) 363
BstSCI CCNGG 5 cut(s) 35, 144, 207, 471, 1191
BstSLI GKGCMC 1 cut(s) 359
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 3 cut(s) 375, 432, 1141
BstV2I GAAGAC 1 cut(s) 663
BstX2I RGATCY 1 cut(s) 777
BstXI CCANNNNNNTGG 1 cut(s) 145
BstYI RGATCY 1 cut(s) 777
BstZ17I GTATAC 1 cut(s) 870
Bsu15I ATCGAT 1 cut(s) 1019
BsuI GTATCC 1 cut(s) 625
BsuRI GGCC 4 cut(s) 149, 240, 390, 970
BsuTUI ATCGAT 1 cut(s) 1019
BtgI CCRYGG 1 cut(s) 996
BtsCI GGATG 2 cut(s) 718, 1006
BtsIMutI CAGTG 2 cut(s) 415, 1172
Cac8I GCNNGC 4 cut(s) 49, 259, 392, 450
CfoI GCGC 4 cut(s) 74, 177, 254, 421
Cfr10I RCCGGY 3 cut(s) 68, 74, 448
Cfr13I GGNCC 2 cut(s) 18, 389
ClaI ATCGAT 1 cut(s) 1019
CseI GACGC 6 cut(s) 41, 53, 122, 172, 176, 302
Csp6I GTAC 2 cut(s) 40, 1038
CspCI CAANNNNNGTGG 2 cut(s) 544, 579
CviAII CATG 8 cut(s) 326, 360, 719, 724, 828, 886, 997, 1210
CviQI GTAC 2 cut(s) 40, 1038
DdeI CTNAG 6 cut(s) 86, 407, 618, 984, 1044, 1125
DinI GGCGCC 1 cut(s) 73
DpnI GATC 4 cut(s) 279, 752, 779, 942
DpnII GATC 4 cut(s) 277, 750, 777, 940
DrdI GACNNNNNNGTC 2 cut(s) 128, 299
DriI GACNNNNNGTC 1 cut(s) 586
DseDI GACNNNNNNGTC 2 cut(s) 128, 299
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 2 cut(s) 456, 1191
Eam1105I GACNNNNNGTC 1 cut(s) 586
EarI CTCTTC 2 cut(s) 456, 1191
EciI GGCGGA 2 cut(s) 71, 176
Eco130I CCWWGG 2 cut(s) 971, 996
Eco147I AGGCCT 2 cut(s) 240, 970
Eco31I GGTCTC 1 cut(s) 83
Eco47I GGWCC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 1154
EcoO109I RGGNCCY 1 cut(s) 18
EcoRI GAATTC 3 cut(s) 532, 544, 800
EcoRII CCWGG 4 cut(s) 35, 144, 207, 1191
EcoT14I CCWWGG 2 cut(s) 971, 996
EgeI GGCGCC 1 cut(s) 73
EheI GGCGCC 1 cut(s) 73
ErhI CCWWGG 2 cut(s) 971, 996
FaeI CATG 8 cut(s) 329, 363, 722, 727, 831, 889, 1000, 1213
FalI AAGNNNNNCTT 4 cut(s) 596, 628, 655, 687
FaqI GGGAC 3 cut(s) 4, 415, 566
FatI CATG 8 cut(s) 325, 359, 718, 723, 827, 885, 996, 1209
FauI CCCGC 4 cut(s) 56, 188, 266, 399
FauNDI CATATG 1 cut(s) 747
FblI GTMKAC 3 cut(s) 231, 303, 869
Fnu4HI GCNGC 8 cut(s) 135, 150, 190, 255, 283, 364, 446, 1130
FokI GGATG 2 cut(s) 725, 1013
Fsp4HI GCNGC 8 cut(s) 135, 150, 190, 255, 283, 364, 446, 1130
FspBI CTAG 2 cut(s) 591, 1217
GlaI GCGC 4 cut(s) 73, 176, 253, 420
GluI GCNGC 8 cut(s) 135, 150, 190, 255, 283, 364, 446, 1130
GsuI CTGGAG 4 cut(s) 185, 191, 395, 1175
HaeII RGCGCY 2 cut(s) 75, 422
HaeIII GGCC 4 cut(s) 149, 240, 390, 970
HapII CCGG 5 cut(s) 69, 75, 442, 449, 473
HgaI GACGC 6 cut(s) 41, 53, 122, 172, 176, 302
HhaI GCGC 4 cut(s) 74, 177, 254, 421
Hin1I GRCGYC 5 cut(s) 33, 45, 72, 114, 294
Hin1II CATG 8 cut(s) 329, 363, 722, 727, 831, 889, 1000, 1213
Hin6I GCGC 4 cut(s) 72, 175, 252, 419
HinP1I GCGC 4 cut(s) 72, 175, 252, 419
HincII GTYRAC 3 cut(s) 232, 304, 480
HindII GTYRAC 3 cut(s) 232, 304, 480
HindIII AAGCTT 1 cut(s) 610
HinfI GANTC 9 cut(s) 90, 212, 382, 403, 438, 587, 763, 934, 1105
HpaII CCGG 5 cut(s) 69, 75, 442, 449, 473
HphI GGTGA 3 cut(s) 85, 584, 1096
Hpy166II GTNNAC 9 cut(s) 232, 268, 304, 357, 457, 480, 870, 1155, 1172
Hpy188I TCNGA 7 cut(s) 89, 112, 217, 862, 922, 981, 1182
Hpy188III TCNNGA 5 cut(s) 374, 767, 938, 960, 1109
Hpy8I GTNNAC 9 cut(s) 232, 268, 304, 357, 457, 480, 870, 1155, 1172
HpyAV CCTTC 6 cut(s) 106, 307, 766, 960, 1081, 1129
HpyCH4V TGCA 5 cut(s) 316, 357, 363, 435, 707
HpyF10VI GCNNNNNNNGC 5 cut(s) 189, 258, 322, 363, 482
HpyF3I CTNAG 6 cut(s) 86, 407, 618, 984, 1044, 1125
Hsp92I GRCGYC 5 cut(s) 33, 45, 72, 114, 294
Hsp92II CATG 8 cut(s) 329, 363, 722, 727, 831, 889, 1000, 1213
HspAI GCGC 4 cut(s) 72, 175, 252, 419
KasI GGCGCC 1 cut(s) 71
KroI GCCGGC 1 cut(s) 448
KroNI GCCGGC 1 cut(s) 450
Kzo9I GATC 4 cut(s) 277, 750, 777, 940
LmnI GCTCC 6 cut(s) 182, 210, 227, 266, 322, 1194
Lsp1109I GCAGC 3 cut(s) 375, 432, 1141
LweI GCATC 1 cut(s) 1025
MaeI CTAG 2 cut(s) 591, 1217
MaeIII GTNAC 1 cut(s) 578
MalI GATC 4 cut(s) 279, 752, 779, 942
MbiI CCGCTC 1 cut(s) 261
MboI GATC 4 cut(s) 277, 750, 777, 940
MboII GAAGA 5 cut(s) 280, 473, 520, 663, 1208
MflI RGATCY 1 cut(s) 777
MhlI GDGCHC 2 cut(s) 224, 359
MluCI AATT 6 cut(s) 532, 544, 792, 800, 923, 990
Mly113I GGCGCC 1 cut(s) 72
MlyI GAGTC 6 cut(s) 206, 397, 447, 596, 943, 1114
MmeI TCCRAC 1 cut(s) 135
MroNI GCCGGC 1 cut(s) 448
MroXI GAANNNNTTC 1 cut(s) 613
MseI TTAA 3 cut(s) 492, 656, 1032
MslI CAYNNNNRTG 2 cut(s) 1057, 1167
MspA1I CMGCKG 2 cut(s) 622, 1132
MspI CCGG 5 cut(s) 69, 75, 442, 449, 473
MspR9I CCNGG 5 cut(s) 37, 146, 209, 473, 1193
MvaI CCWGG 4 cut(s) 37, 146, 209, 1193
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 5 cut(s) 189, 258, 322, 363, 482
NaeI GCCGGC 1 cut(s) 450
NarI GGCGCC 1 cut(s) 72
NciI CCSGG 1 cut(s) 473
NcoI CCATGG 1 cut(s) 996
NdeI CATATG 1 cut(s) 747
NdeII GATC 4 cut(s) 277, 750, 777, 940
NgoMIV GCCGGC 1 cut(s) 448
NlaIII CATG 8 cut(s) 329, 363, 722, 727, 831, 889, 1000, 1213
NlaIV GGNNCC 3 cut(s) 20, 73, 880
NmuCI GTSAC 1 cut(s) 578
NspI RCATGY 1 cut(s) 363
NspV TTCGAA 1 cut(s) 530
PceI AGGCCT 2 cut(s) 240, 970
PcsI WCGNNNNNNNCGW 6 cut(s) 39, 120, 126, 138, 297, 300
PdiI GCCGGC 1 cut(s) 450
PdmI GAANNNNTTC 1 cut(s) 613
PfeI GAWTC 3 cut(s) 90, 382, 763
PfoI TCCNGGA 2 cut(s) 207, 1191
PkrI GCNGC 8 cut(s) 136, 151, 191, 256, 284, 365, 447, 1131
Ple19I CGATCG 1 cut(s) 280
PleI GAGTC 6 cut(s) 206, 397, 446, 595, 942, 1113
PluTI GGCGCC 1 cut(s) 75
PpsI GAGTC 6 cut(s) 206, 397, 446, 595, 942, 1113
PpuMI RGGWCCY 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 18
Psp6I CCWGG 4 cut(s) 35, 144, 207, 1191
PspGI CCWGG 4 cut(s) 35, 144, 207, 1191
PspN4I GGNNCC 3 cut(s) 20, 73, 880
PspPI GGNCC 2 cut(s) 18, 389
PspPPI RGGWCCY 1 cut(s) 18
PsuI RGATCY 1 cut(s) 777
PvuI CGATCG 1 cut(s) 280
PvuII CAGCTG 2 cut(s) 622, 1132
RsaI GTAC 2 cut(s) 41, 1039
RsaNI GTAC 2 cut(s) 40, 1038
RseI CAYNNNNRTG 2 cut(s) 1057, 1167
SalI GTCGAC 2 cut(s) 230, 302
SaqAI TTAA 3 cut(s) 492, 656, 1032
SatI GCNGC 8 cut(s) 135, 150, 190, 255, 283, 364, 446, 1130
Sau3AI GATC 4 cut(s) 277, 750, 777, 940
Sau96I GGNCC 2 cut(s) 18, 389
SchI GAGTC 6 cut(s) 206, 397, 447, 596, 943, 1114
ScrFI CCNGG 5 cut(s) 37, 146, 209, 473, 1193
SduI GDGCHC 2 cut(s) 224, 359
SfaNI GCATC 1 cut(s) 1025
SfoI GGCGCC 1 cut(s) 73
SfuI TTCGAA 1 cut(s) 530
SgrAI CRCCGGYG 1 cut(s) 68
SgrDI CGTCGACG 1 cut(s) 302
SinI GGWCC 1 cut(s) 18
SmiMI CAYNNNNRTG 2 cut(s) 1057, 1167
SmlI CTYRAG 2 cut(s) 422, 767
SmoI CTYRAG 2 cut(s) 422, 767
Sse9I AATT 6 cut(s) 532, 544, 792, 800, 923, 990
SseBI AGGCCT 2 cut(s) 240, 970
SspDI GGCGCC 1 cut(s) 71
SspI AATATT 2 cut(s) 430, 700
SspMI CTAG 2 cut(s) 591, 1217
StuI AGGCCT 2 cut(s) 240, 970
StyD4I CCNGG 5 cut(s) 35, 144, 207, 471, 1191
StyI CCWWGG 2 cut(s) 971, 996
TaqI TCGA 8 cut(s) 165, 231, 291, 303, 530, 536, 909, 1019
TasI AATT 6 cut(s) 532, 544, 792, 800, 923, 990
TauI GCSGC 5 cut(s) 137, 152, 192, 257, 285
TfiI GAWTC 3 cut(s) 90, 382, 763
Tru1I TTAA 3 cut(s) 492, 656, 1032
Tru9I TTAA 3 cut(s) 492, 656, 1032
TscAI CASTG 2 cut(s) 415, 1172
TseFI GTSAC 1 cut(s) 578
TseI GCWGC 3 cut(s) 363, 445, 1129
Tsp45I GTSAC 1 cut(s) 578
TspDTI ATGAA 2 cut(s) 793, 1166
TspGWI ACGGA 3 cut(s) 74, 217, 253
TspRI CASTG 2 cut(s) 415, 1172
VneI GTGCAC 1 cut(s) 355
VpaK11BI GGWCC 1 cut(s) 18
XapI RAATTY 5 cut(s) 532, 544, 800, 923, 990
XceI RCATGY 1 cut(s) 363
XmiI GTMKAC 3 cut(s) 231, 303, 869
XmnI GAANNNNTTC 1 cut(s) 613
XspI CTAG 2 cut(s) 591, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.