RH2BG527000

SAWADEE domain

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000405
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG527000.1

Sequence Viewer

Length: 1266 bp
ATGGCGTTAGAGTTCAGGTCGTACAAGGACGACGCGTGGTACGACGCTCGCGTCGTGACGGAGGGCCGCCGTGGTACTCGCTTGAGAATCAAGTTCTTCAGCTTCGCCGACGACCAGGACGAGTTCGTCCACGCCAAGAACTTGAAGAAGCTCCAAGACGTCGACGCTCTGAGGTCTCGGTTCAGGAAAATCTCTGTCCAGTTTCAGGACACGGATTGTTCCCGGGTCGAACCGGGCTTGCTCGTCTGCGCTGCCCGACCCGTCGGCGACGGTGACCTGAAGTTCTACGACGCCGTTTTCAGAGGGGTGGTGAAGAAGGAGCATCAGATTGTAAAGGGAGTGGAAGTGTGCAAATGTACCTTCATCCTCGACTGGATTGACAATGGAGAATCTGGTTCATGCACTGTTGAGAATATTTGCAGAGTGCAGGATACTAGTGACGAAGAATTGGATCCGGCTCTGATTTCTTTTCTCAACAAGGCCAGAGAGAGAATCGAAAGTACTTTTTGTACTCGGTTGAGGATTACTAGTGGAGATGTTTATGATCTCAGAGCACCACACAAGGATGCAAGCCGTTCCACCGCAGCCATGGCTCTAGGCGGCTCTGTTGAAGGAATGGGTGCAGATTCTGATTCATTAAGGATCTCTTATGAAGCTGCTGATCCCAAAAAGCGCTACAAGGTTACAAGCCCGCCCAAGGAATCTTTGCCTTTGAGCTGCTACGTTGAAGGAATAAGTGATAATGCTTCTGATATGGCTGGACGAGATGACATGGATGTAGGAGGTTCTCCCTATATGGTAATAGTTGAGAACCTGGAGAAGGAAATATCACCAGTTACAATTATGGAATTTATACACCAGCAAGTTTCAATCACATGTCAAGTCTCTGTTTCGCCAAGTAAGTCATCGGAGTTGTATACACGTGCAATTATCCTATTGGACAGCAAAAAGAATCTTGAGAAGTTATCCGACTTTCTGGAGAGTCCAGATCACATCATCATTTCCTCCATAGGAAGGCCTTGGCTCATGACTGAGAAAAGATCATTACCTGAGACACTAAGGGCATCAATCCAAACCTTATCTCAGATGGAATTGAAGACAAGAACTCTAAGTAACAATGAGTTGAATGTTGTCTTTTCTGGAAGTCACGAATACATGGAAGCTAAAGAGCAACAAAAATTGTTTAAAGAGTTCACTGAACACCAGTGTGGACTTCAGCGGAGGTTACAACTTGAAGAGGAAAAGATCTCAAAGAAGTACAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAWADEE

Protein Analysis

421

Amino Acids

47.71

Weight (kDa)

5.71

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAWADEE PF16719 2 - 140 3.2e-28 SAWADEE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000405)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25330
fragaria_vesca FvH4_2g12920 FvH4_2g12920 FvH4_2g12920 FvH4_2g12920 FvH4_3g17720 FvH4_3g17720 FvH4_3g20410 FvH4_3g20410 FvH4_5g23730 FvH4_5g23730 FvH4_5g23730 FvH4_6g40510 FvH4_6g40520 FvH4_6g40530 FvH4_6g40530
malus_domestica MD09G1128800.v1.1 MD09G1128900.v1.1 MD09G1129100.v1.1 MD17G1118100.v1.1
prunus_persica Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196400_v2.0.a1 Prupe.3G196500_v2.0.a1 Prupe.3G196500_v2.0.a1
pyrus_communis pycom09g05230 pycom09g05240 pycom10g00180 pycom17g10860
rosa_chinensis RchiOBHm_Chr2g0133241 RchiOBHm_Chr2g0133311 RchiOBHm_Chr2g0155531 RchiOBHm_Chr2g0155771 RchiOBHm_Chr2g0155781 RchiOBHm_Chr2g0155791 RchiOBHm_Chr5g0029431 RchiOBHm_Chr5g0034301 RchiOBHm_Chr7g0213061
rosa_laevigata RLG00000002835 RLG00000019323 RLG00000020863 RLG00000020864 RLG00000033165 RLG00000033538
rosa_multiflora Rmu_co8060268.1_g000001 Rmu_sc0000062.1_g000021 Rmu_sc0001121.1_g000020 Rmu_sc0001446.1_g000013 Rmu_sc0002712.1_g000021 Rmu_sc0003417.1_g000005 Rmu_sc0023254.1_g000004 Rmu_sc0024719.1_g000001 Rmu_sc0033434.1_g000002
rosa_roxburghii Rroxscaffold_1G00045970 Rroxscaffold_2G00093480 Rroxscaffold_2G00093490 Rroxscaffold_2G00093500 Rroxscaffold_2G00111280 Rroxscaffold_3G00246280 Rroxscaffold_7G00195910
rosa_rugosa Rorug02G0310900 Rorug02G0449800 Rorug02G0449900 Rorug04G0061300 Rorug05G0145100 Rorug06G0068700 Rorug07G0139100
rosa_samantha Rh2AG363400 Rh2AG515900 Rh2AG516000 Rh2BG369100 Rh2BG525000 Rh2BG526900 Rh2BG527000 Rh2CG346700 Rh2CG500900 Rh2CG501000 Rh2DG386100 Rh2DG535900 Rh2DG536000 Rh5AG236700 Rh5BG204800 Rh5BG237200 Rh5CG226800 Rh5CG267000 Rh5DG208400 Rh5DG244700 Rh7AG270400 Rh7AG270500 Rh7BG266000 Rh7CG289700 Rh7CG289800 Rh7DG278700
rosa_wichuraiana Rw2G029570 Rw2G042430 Rw2G042440 Rw5G021290 Rw7G023500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 50, 125
AatII GACGTC 1 cut(s) 162
AccI GTMKAC 2 cut(s) 162, 917
AccII CGCG 2 cut(s) 35, 51
AciI CCGC 5 cut(s) 67, 582, 600, 692, 1219
AclWI GGATC 4 cut(s) 446, 459, 650, 656
AcsI RAATTY 1 cut(s) 848
AcuI CTGAAG 3 cut(s) 82, 299, 1199
AcvI CACGTG 1 cut(s) 923
AcyI GRCGYC 2 cut(s) 159, 291
AfaI GTAC 7 cut(s) 23, 41, 76, 358, 502, 511, 1259
AfeI AGCGCT 1 cut(s) 674
AfiI CCNNNNNNNGG 4 cut(s) 205, 697, 820, 1014
AflIII ACRYGT 3 cut(s) 33, 875, 920
AgsI TTSAA 7 cut(s) 145, 611, 728, 870, 1096, 1126, 1235
AhlI ACTAGT 2 cut(s) 434, 527
AjnI CCWGG 2 cut(s) 114, 813
AleI CACNNNNGTG 1 cut(s) 1206
AluBI AGCT 5 cut(s) 102, 151, 656, 717, 1163
AluI AGCT 5 cut(s) 102, 151, 656, 717, 1163
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 3 cut(s) 180, 889, 1046
AlwI GGATC 4 cut(s) 446, 459, 650, 656
AlwNI CAGNNNCTG 1 cut(s) 629
Ama87I CYCGRG 1 cut(s) 222
Aor51HI AGCGCT 1 cut(s) 674
AoxI GGCC 3 cut(s) 64, 480, 1016
ApeKI GCWGC 4 cut(s) 251, 584, 656, 717
ApoI RAATTY 1 cut(s) 848
AspLEI GCGC 2 cut(s) 251, 675
AspS9I GGNCC 1 cut(s) 64
AsuC2I CCSGG 3 cut(s) 223, 224, 234
AsuHPI GGTGA 3 cut(s) 284, 322, 822
AvaI CYCGRG 1 cut(s) 222
BamHI GGATCC 1 cut(s) 451
BbrPI CACGTG 1 cut(s) 923
BbsI GAAGAC 1 cut(s) 1103
Bbv12I GWGCWC 1 cut(s) 556
BbvI GCAGC 4 cut(s) 238, 596, 643, 704
BccI CCATC 1 cut(s) 1081
BceAI ACGGC 3 cut(s) 54, 278, 558
BciT130I CCWGG 2 cut(s) 116, 815
BciVI GTATCC 1 cut(s) 424
BcnI CCSGG 3 cut(s) 223, 224, 234
BcoDI GTCTC 3 cut(s) 180, 889, 1046
BcuI ACTAGT 2 cut(s) 434, 527
BfaI CTAG 3 cut(s) 435, 528, 596
BfoI RGCGCY 1 cut(s) 676
BfuI GTATCC 1 cut(s) 424
BglII AGATCT 1 cut(s) 1245
BisI GCNGC 6 cut(s) 67, 252, 585, 601, 657, 718
BlsI GCNGC 6 cut(s) 68, 253, 586, 602, 658, 719
BmcAI AGTACT 1 cut(s) 502
Bme1390I CCNGG 5 cut(s) 116, 223, 224, 234, 815
BmeT110I CYCGRG 1 cut(s) 222
BmgT120I GGNCC 1 cut(s) 64
BmiI GGNNCC 1 cut(s) 453
BmrFI CCNGG 5 cut(s) 116, 223, 224, 234, 815
BmsI GCATC 3 cut(s) 331, 556, 1073
BpiI GAAGAC 1 cut(s) 1103
BpmI CTGGAG 2 cut(s) 836, 998
BpuEI CTTGAG 2 cut(s) 103, 977
BpuMI CCSGG 3 cut(s) 223, 224, 234
BsaAI YACGTR 1 cut(s) 923
BsaHI GRCGYC 2 cut(s) 159, 291
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 5 cut(s) 70, 222, 588, 696, 1019
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 4 cut(s) 205, 697, 820, 1014
Bse1I ACTGG 4 cut(s) 199, 377, 833, 1204
BseBI CCWGG 2 cut(s) 116, 815
BseDI CCNNGG 5 cut(s) 70, 222, 588, 696, 1019
BseGI GGATG 3 cut(s) 363, 571, 781
BseLI CCNNNNNNNGG 4 cut(s) 205, 697, 820, 1014
BseMII CTCAG 5 cut(s) 161, 562, 1023, 1041, 1097
BseNI ACTGG 4 cut(s) 199, 377, 833, 1204
BseXI GCAGC 4 cut(s) 238, 596, 643, 704
BsgI GTGCAG 2 cut(s) 446, 642
Bsh1236I CGCG 2 cut(s) 35, 51
BshFI GGCC 3 cut(s) 66, 482, 1018
BsiHKAI GWGCWC 1 cut(s) 556
BsiHKCI CYCGRG 1 cut(s) 222
BsiSI CCGG 3 cut(s) 223, 233, 455
BslI CCNNNNNNNGG 4 cut(s) 205, 697, 820, 1014
BsmAI GTCTC 3 cut(s) 180, 889, 1046
BsnI GGCC 3 cut(s) 66, 482, 1018
Bso31I GGTCTC 1 cut(s) 180
BsoBI CYCGRG 1 cut(s) 222
Bsp1286I GDGCHC 1 cut(s) 556
Bsp143I GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
Bsp19I CCATGG 1 cut(s) 588
BspACI CCGC 5 cut(s) 67, 582, 600, 692, 1219
BspANI GGCC 3 cut(s) 66, 482, 1018
BspCNI CTCAG 5 cut(s) 162, 561, 1024, 1042, 1096
BspFNI CGCG 2 cut(s) 35, 51
BspHI TCATGA 1 cut(s) 1026
BspLI GGNNCC 1 cut(s) 453
BspPI GGATC 4 cut(s) 446, 459, 650, 656
BspTNI GGTCTC 1 cut(s) 180
BsrI ACTGG 4 cut(s) 199, 377, 833, 1204
BssECI CCNNGG 5 cut(s) 70, 222, 588, 696, 1019
BssMI GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
BssNAI GTATAC 1 cut(s) 918
BssNI GRCGYC 2 cut(s) 159, 291
BssT1I CCWWGG 3 cut(s) 588, 696, 1019
Bst1107I GTATAC 1 cut(s) 918
Bst2UI CCWGG 2 cut(s) 116, 815
Bst4CI ACNGT 2 cut(s) 272, 406
Bst6I CTCTTC 1 cut(s) 1230
BstACI GRCGYC 2 cut(s) 159, 291
BstBAI YACGTR 1 cut(s) 923
BstC8I GCNNGC 4 cut(s) 49, 239, 571, 692
BstDEI CTNAG 7 cut(s) 170, 548, 1032, 1050, 1058, 1083, 1109
BstDSI CCRYGG 2 cut(s) 70, 588
BstEII GGTNACC 1 cut(s) 272
BstENI CCTNNNNNAGG 1 cut(s) 818
BstF5I GGATG 3 cut(s) 363, 571, 781
BstFNI CGCG 2 cut(s) 35, 51
BstH2I RGCGCY 1 cut(s) 676
BstHHI GCGC 2 cut(s) 251, 675
BstKTI GATC 7 cut(s) 454, 547, 645, 664, 991, 1043, 1248
BstMAI GTCTC 3 cut(s) 180, 889, 1046
BstMBI GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
BstMWI GCNNNNNNNGC 1 cut(s) 590
BstNI CCWGG 2 cut(s) 116, 815
BstNSI RCATGY 1 cut(s) 879
BstPI GGTNACC 1 cut(s) 272
BstSCI CCNGG 5 cut(s) 114, 221, 222, 232, 813
BstUI CGCG 2 cut(s) 35, 51
BstV1I GCAGC 4 cut(s) 238, 596, 643, 704
BstV2I GAAGAC 1 cut(s) 1103
BstX2I RGATCY 3 cut(s) 451, 642, 1245
BstYI RGATCY 3 cut(s) 451, 642, 1245
BstZ17I GTATAC 1 cut(s) 918
BsuI GTATCC 1 cut(s) 424
BsuRI GGCC 3 cut(s) 66, 482, 1018
BtgI CCRYGG 2 cut(s) 70, 588
BtsCI GGATG 3 cut(s) 363, 571, 781
BtsIMutI CAGTG 3 cut(s) 402, 1194, 1211
Cac8I GCNNGC 4 cut(s) 49, 239, 571, 692
CaiI CAGNNNCTG 1 cut(s) 629
CciI TCATGA 1 cut(s) 1026
CfoI GCGC 2 cut(s) 251, 675
Cfr13I GGNCC 1 cut(s) 64
Cfr9I CCCGGG 1 cut(s) 222
CseI GACGC 5 cut(s) 40, 41, 53, 173, 299
Csp6I GTAC 7 cut(s) 22, 40, 75, 357, 501, 510, 1258
CviAII CATG 6 cut(s) 399, 589, 772, 876, 1027, 1156
CviQI GTAC 7 cut(s) 22, 40, 75, 357, 501, 510, 1258
DdeI CTNAG 7 cut(s) 170, 548, 1032, 1050, 1058, 1083, 1109
DpnI GATC 7 cut(s) 453, 546, 644, 663, 990, 1042, 1247
DpnII GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
DraI TTTAAA 1 cut(s) 1186
DrdI GACNNNNNNGTC 2 cut(s) 50, 125
DseDI GACNNNNNNGTC 2 cut(s) 50, 125
Eam1104I CTCTTC 1 cut(s) 1230
EarI CTCTTC 1 cut(s) 1230
Eco130I CCWWGG 3 cut(s) 588, 696, 1019
Eco147I AGGCCT 1 cut(s) 1018
Eco31I GGTCTC 1 cut(s) 180
Eco47III AGCGCT 1 cut(s) 674
Eco57I CTGAAG 3 cut(s) 82, 299, 1199
Eco72I CACGTG 1 cut(s) 923
Eco88I CYCGRG 1 cut(s) 222
Eco91I GGTNACC 1 cut(s) 272
EcoNI CCTNNNNNAGG 1 cut(s) 818
EcoO65I GGTNACC 1 cut(s) 272
EcoRII CCWGG 2 cut(s) 114, 813
EcoT14I CCWWGG 3 cut(s) 588, 696, 1019
ErhI CCWWGG 3 cut(s) 588, 696, 1019
FaeI CATG 6 cut(s) 402, 592, 775, 879, 1030, 1159
FalI AAGNNNNNCTT 2 cut(s) 631, 663
FatI CATG 6 cut(s) 398, 588, 771, 875, 1026, 1155
FauI CCCGC 1 cut(s) 699
FblI GTMKAC 2 cut(s) 162, 917
Fnu4HI GCNGC 6 cut(s) 67, 252, 585, 601, 657, 718
FokI GGATG 3 cut(s) 350, 578, 788
Fsp4HI GCNGC 6 cut(s) 67, 252, 585, 601, 657, 718
FspBI CTAG 3 cut(s) 435, 528, 596
GlaI GCGC 2 cut(s) 250, 674
GluI GCNGC 6 cut(s) 67, 252, 585, 601, 657, 718
GsuI CTGGAG 2 cut(s) 836, 998
HaeII RGCGCY 1 cut(s) 676
HaeIII GGCC 3 cut(s) 66, 482, 1018
HapII CCGG 3 cut(s) 223, 233, 455
HgaI GACGC 5 cut(s) 40, 41, 53, 173, 299
HhaI GCGC 2 cut(s) 251, 675
Hin1I GRCGYC 2 cut(s) 159, 291
Hin1II CATG 6 cut(s) 402, 592, 775, 879, 1030, 1159
Hin6I GCGC 2 cut(s) 249, 673
HinP1I GCGC 2 cut(s) 249, 673
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HinfI GANTC 8 cut(s) 87, 389, 492, 626, 632, 701, 952, 982
HpaII CCGG 3 cut(s) 223, 233, 455
HphI GGTGA 3 cut(s) 284, 322, 822
Hpy166II GTNNAC 5 cut(s) 130, 163, 918, 1194, 1211
Hpy188III TCNNGA 9 cut(s) 55, 184, 206, 956, 977, 986, 1027, 1140, 1148
Hpy8I GTNNAC 5 cut(s) 130, 163, 918, 1194, 1211
Hpy99I CGWCG 9 cut(s) 35, 47, 56, 113, 164, 167, 266, 272, 293
HpyAV CCTTC 6 cut(s) 310, 370, 605, 722, 814, 1008
HpyCH4III ACNGT 2 cut(s) 272, 406
HpyCH4IV ACGT 3 cut(s) 159, 723, 922
HpyCH4V TGCA 7 cut(s) 351, 402, 420, 427, 569, 623, 926
HpyF10VI GCNNNNNNNGC 1 cut(s) 590
HpyF3I CTNAG 7 cut(s) 170, 548, 1032, 1050, 1058, 1083, 1109
HpySE526I ACGT 3 cut(s) 159, 723, 922
Hsp92I GRCGYC 2 cut(s) 159, 291
Hsp92II CATG 6 cut(s) 402, 592, 775, 879, 1030, 1159
HspAI GCGC 2 cut(s) 249, 673
Kzo9I GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
LmnI GCTCC 2 cut(s) 156, 319
Lsp1109I GCAGC 4 cut(s) 238, 596, 643, 704
LweI GCATC 3 cut(s) 331, 556, 1073
MaeI CTAG 3 cut(s) 435, 528, 596
MaeII ACGT 3 cut(s) 159, 723, 922
MaeIII GTNAC 8 cut(s) 55, 272, 437, 682, 835, 1112, 1145, 1224
MalI GATC 7 cut(s) 453, 546, 644, 663, 990, 1042, 1247
MboI GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
MboII GAAGA 6 cut(s) 88, 157, 325, 455, 1108, 1247
MflI RGATCY 3 cut(s) 451, 642, 1245
MhlI GDGCHC 1 cut(s) 556
MluCI AATT 6 cut(s) 446, 840, 848, 927, 1091, 1178
MluI ACGCGT 1 cut(s) 33
MlyI GAGTC 1 cut(s) 991
MmeI TCCRAC 1 cut(s) 993
MnlI CCTC 9 cut(s) 55, 165, 296, 377, 513, 776, 1015, 1215, 1231
MseI TTAA 2 cut(s) 638, 1185
MslI CAYNNNNRTG 2 cut(s) 564, 1206
MspA1I CMGCKG 1 cut(s) 1219
MspI CCGG 3 cut(s) 223, 233, 455
MspR9I CCNGG 5 cut(s) 116, 223, 224, 234, 815
MvaI CCWGG 2 cut(s) 116, 815
MvnI CGCG 2 cut(s) 35, 51
MwoI GCNNNNNNNGC 1 cut(s) 590
NciI CCSGG 3 cut(s) 223, 224, 234
NcoI CCATGG 1 cut(s) 588
NdeII GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
NlaIII CATG 6 cut(s) 402, 592, 775, 879, 1030, 1159
NlaIV GGNNCC 1 cut(s) 453
NmuCI GTSAC 4 cut(s) 55, 272, 437, 1145
NspI RCATGY 1 cut(s) 879
OliI CACNNNNGTG 1 cut(s) 1206
PagI TCATGA 1 cut(s) 1026
PceI AGGCCT 1 cut(s) 1018
PciI ACATGT 1 cut(s) 875
PcsI WCGNNNNNNNCGW 4 cut(s) 39, 48, 51, 117
PfeI GAWTC 7 cut(s) 87, 389, 492, 626, 632, 701, 952
PkrI GCNGC 6 cut(s) 68, 253, 586, 602, 658, 719
PleI GAGTC 1 cut(s) 990
PmaCI CACGTG 1 cut(s) 923
PmlI CACGTG 1 cut(s) 923
PpsI GAGTC 1 cut(s) 990
Ppu21I YACGTR 1 cut(s) 923
PscI ACATGT 1 cut(s) 875
Psp6I CCWGG 2 cut(s) 114, 813
PspCI CACGTG 1 cut(s) 923
PspEI GGTNACC 1 cut(s) 272
PspGI CCWGG 2 cut(s) 114, 813
PspN4I GGNNCC 1 cut(s) 453
PspPI GGNCC 1 cut(s) 64
PstNI CAGNNNCTG 1 cut(s) 629
PsuI RGATCY 3 cut(s) 451, 642, 1245
RsaI GTAC 7 cut(s) 23, 41, 76, 358, 502, 511, 1259
RsaNI GTAC 7 cut(s) 22, 40, 75, 357, 501, 510, 1258
RseI CAYNNNNRTG 2 cut(s) 564, 1206
SalI GTCGAC 1 cut(s) 161
SaqAI TTAA 2 cut(s) 638, 1185
SatI GCNGC 6 cut(s) 67, 252, 585, 601, 657, 718
Sau3AI GATC 7 cut(s) 451, 544, 642, 661, 988, 1040, 1245
Sau96I GGNCC 1 cut(s) 64
ScaI AGTACT 1 cut(s) 502
SchI GAGTC 1 cut(s) 991
ScrFI CCNGG 5 cut(s) 116, 223, 224, 234, 815
SduI GDGCHC 1 cut(s) 556
SfaNI GCATC 3 cut(s) 331, 556, 1073
SgrDI CGTCGACG 1 cut(s) 161
SmaI CCCGGG 1 cut(s) 224
SmiMI CAYNNNNRTG 2 cut(s) 564, 1206
SmlI CTYRAG 2 cut(s) 82, 956
SmoI CTYRAG 2 cut(s) 82, 956
SpeI ACTAGT 2 cut(s) 434, 527
Sse9I AATT 6 cut(s) 446, 840, 848, 927, 1091, 1178
SseBI AGGCCT 1 cut(s) 1018
SsiI CCGC 5 cut(s) 67, 582, 600, 692, 1219
SspI AATATT 1 cut(s) 415
SspMI CTAG 3 cut(s) 435, 528, 596
StuI AGGCCT 1 cut(s) 1018
StyD4I CCNGG 5 cut(s) 114, 221, 222, 232, 813
StyI CCWWGG 3 cut(s) 588, 696, 1019
TaaI ACNGT 2 cut(s) 272, 406
TaiI ACGT 3 cut(s) 162, 726, 925
TaqI TCGA 4 cut(s) 162, 228, 369, 495
TasI AATT 6 cut(s) 446, 840, 848, 927, 1091, 1178
TatI WGTACW 3 cut(s) 500, 509, 1257
TauI GCSGC 2 cut(s) 69, 603
TfiI GAWTC 7 cut(s) 87, 389, 492, 626, 632, 701, 952
Tru1I TTAA 2 cut(s) 638, 1185
Tru9I TTAA 2 cut(s) 638, 1185
TscAI CASTG 3 cut(s) 409, 1201, 1211
TseFI GTSAC 4 cut(s) 55, 272, 437, 1145
TseI GCWGC 4 cut(s) 251, 584, 656, 717
Tsp45I GTSAC 4 cut(s) 55, 272, 437, 1145
TspDTI ATGAA 4 cut(s) 352, 387, 624, 666
TspGWI ACGGA 2 cut(s) 74, 227
TspMI CCCGGG 1 cut(s) 222
TspRI CASTG 3 cut(s) 409, 1201, 1211
XagI CCTNNNNNAGG 1 cut(s) 818
XapI RAATTY 1 cut(s) 848
XceI RCATGY 1 cut(s) 879
XcmI CCANNNNNNNNNTGG 1 cut(s) 586
XmaI CCCGGG 1 cut(s) 222
XmiI GTMKAC 2 cut(s) 162, 917
XspI CTAG 3 cut(s) 435, 528, 596
ZraI GACGTC 1 cut(s) 160
ZrmI AGTACT 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.