Prupe.4G086200_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000656
Physical Location & Seq
Forward (+)
4246589 .. 4248178
1590 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G086200.1

Sequence Viewer

Length: 1080 bp
ATGGAAAACACGAGAAGTCTTGAAAATATTGTCTCAGCTAGAGGTTTGATAAATTTCATTCCCATCCAAATGACCCTAAAAGCTGCAATTGAGCTAAATGTCTTCAGCATCATAGCCAAGTCAGGGCCAGCATCTCATCTCACAGCAAAAGAAATTGCCTCACAAATTCCAACTTCAAATCCAAATGCAGCTGGGAATTTGGAGAGAATTCTGAGACTGCTGGCTGCCCATTCCCTCCTATCCACAACCCTAAACCCATGCCCAAATGATGAGACATTGCAAGAAAGGGCTTATGGCCTCACAAATGAGACACTCTGCTTGGTTCCAGATGAAAATGGAGTTTCATTGGCCCCATTTATAATTTTGAACTCTGAACTTGAGATTGTGAAGAGCTTGTACATGCTCAAGCACACAGTGCTTGAACCAGACTTCTTGCCCTTCTGCAAGGCCCATGGAATTACCATTTATGAGTACATGTCCAAGAAACCCGAGATGAGCCAATTGTTTAACAAGTCTATGGCTGAAACTTCTAACCTAAATTTTAGTGAGGTGTTAAAGGTTTACAAAGGGTTTGAGGAGGTGAAGGAGTTGATGGATGTAGGGGGTGGCATTGGAACTTCCATGTCAGAAGTAGTTTCCATGTATCCCCACATCCATGGAATTAACTTTGATTTGCCCAATGTTGTTGCCCAAGCTCCTACGTACCAAGGTGTGAATCATGTTGGTGGAAATATGTTTGAGACGATACCAAATGCACAATCTATTATGTTGAAGTGGGTGCTCCATAACTGGGGAGATGATCAATGCAAGAAAGTATTGAGAAATTGTTGGGAGGCATTGCCAAAAAGTGGGAAGGTGATAGTTGTGGAATTTGCAATACCTGAAGAACTGGAGAAGACAAAAGCGGTGTTGAACATAGTAACCTTGGACATCACAATGATGGCATGTCCTGGCGGTAAGGAACGAACAACAACTGAGTTTGCTAACTTAGCAAAACATGTAGGTTTTGTCGAAACTAAATTTTTTCCAATCTCATATGGGATTTATGTTTTGGAGTTTCTCAAGATAGAAGAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00950 ko01100 ko01110 map00940 map00950 map01100 map01110
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

360

Amino Acids

39.8

Weight (kDa)

5.46

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000656)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g09630 FvH4_3g13140 FvH4_3g13141 FvH4_3g13160 FvH4_3g13170 FvH4_6g14540
malus_domestica MD10G1257600.v1.1
prunus_persica Prupe.4G086200_v2.0.a1
pyrus_communis pycom05g25920 pycom10g21380
rosa_chinensis RchiOBHm_Chr5g0014991 RchiOBHm_Chr5g0046111 RchiOBHm_Chr5g0056661 RchiOBHm_Chr7g0209941 RchiOBHm_Chr7g0211601 RchiOBHm_Chr7g0228691
rosa_laevigata RLG00000002994 RLG00000003075 RLG00000032124 RLG00000032125 RLG00000032158 RLG00000034388 RLG00000034564 RLG00000035118
rosa_multiflora Rmu_sc0003162.1_g000007 Rmu_sc0003162.1_g000010 Rmu_sc0003760.1_g000034 Rmu_sc0004232.1_g000016 Rmu_sc0004232.1_g000017 Rmu_sc0004232.1_g000023 Rmu_sc0004889.1_g000017 Rmu_sc0008669.1_g000001 Rmu_sc0009240.1_g000017 Rmu_sc0009255.1_g000012 Rmu_sc0013112.1_g000007
rosa_roxburghii Rroxscaffold_1G00023690 Rroxscaffold_1G00035370 Rroxscaffold_1G00035380 Rroxscaffold_1G00061590 Rroxscaffold_1G00061940 Rroxscaffold_3G00230880 Rroxscaffold_3G00247690
rosa_rugosa Rorug05G0019200 Rorug05G0022400 Rorug05G0225700 Rorug05G0246400 Rorug05G0301100 Rorug07G0117600 Rorug07G0126200
rosa_samantha Rh5AG114200 Rh5AG114300 Rh5AG117800 Rh5BG111300 Rh5BG115000 Rh5BG314800 Rh5BG383300 Rh5CG126300 Rh5CG359500 Rh5CG406400 Rh5DG110100 Rh5DG110600 Rh5DG114500 Rh5DG396000 Rh5DG396100 Rh7AG251400 Rh7AG403800 Rh7BG246000 Rh7CG268200 Rh7DG258000 Rh7DG266400
rosa_wichuraiana Rw5G009920 Rw5G010150 Rw5G028650 Rw5G034830 Rw7G021330 Rw7G022120 Rw7G033560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 359
AccB7I CCANNNNNTGG 1 cut(s) 848
AciI CCGC 2 cut(s) 905, 954
AcsI RAATTY 7 cut(s) 52, 165, 196, 207, 538, 869, 1019
AcuI CTGAAG 2 cut(s) 88, 903
AdeI CACNNNGTG 1 cut(s) 415
AfaI GTAC 3 cut(s) 398, 473, 704
AfiI CCNNNNNNNGG 3 cut(s) 123, 790, 848
AflIII ACRYGT 2 cut(s) 474, 997
AgsI TTSAA 6 cut(s) 23, 177, 367, 422, 772, 913
AjnI CCWGG 1 cut(s) 949
AluBI AGCT 6 cut(s) 38, 83, 94, 191, 393, 695
AluI AGCT 6 cut(s) 38, 83, 94, 191, 393, 695
Alw21I GWGCWC 1 cut(s) 783
Alw26I GTCTC 5 cut(s) 37, 208, 266, 302, 734
Ama87I CYCGRG 1 cut(s) 488
AoxI GGCC 4 cut(s) 125, 295, 348, 447
ApeKI GCWGC 3 cut(s) 83, 188, 224
ApoI RAATTY 7 cut(s) 52, 165, 196, 207, 538, 869, 1019
AspS9I GGNCC 3 cut(s) 125, 349, 448
AsuHPI GGTGA 2 cut(s) 592, 868
AvaI CYCGRG 1 cut(s) 488
BarI GAAGNNNNNNTAC 2 cut(s) 380, 412
BauI CACGAG 1 cut(s) 10
BbsI GAAGAC 2 cut(s) 94, 902
Bbv12I GWGCWC 1 cut(s) 783
BbvI GCAGC 3 cut(s) 70, 200, 211
BccI CCATC 3 cut(s) 71, 586, 934
BciT130I CCWGG 1 cut(s) 951
BciVI GTATCC 1 cut(s) 654
BclI TGATCA 1 cut(s) 799
BcoDI GTCTC 5 cut(s) 37, 208, 266, 302, 734
BfaI CTAG 1 cut(s) 39
BfuI GTATCC 1 cut(s) 654
BisI GCNGC 3 cut(s) 84, 189, 225
BlsI GCNGC 3 cut(s) 85, 190, 226
Bme1390I CCNGG 1 cut(s) 951
BmeT110I CYCGRG 1 cut(s) 488
BmgT120I GGNCC 3 cut(s) 125, 349, 448
BmiI GGNNCC 2 cut(s) 324, 351
BmrFI CCNGG 1 cut(s) 951
BmrI ACTGGG 1 cut(s) 799
BmsI GCATC 2 cut(s) 117, 140
BmuI ACTGGG 1 cut(s) 799
BpiI GAAGAC 2 cut(s) 94, 902
BpmI CTGGAG 1 cut(s) 911
BpuEI CTTGAG 3 cut(s) 389, 398, 1046
BsaAI YACGTR 1 cut(s) 702
BsaJI CCNNGG 4 cut(s) 451, 655, 706, 924
Bsc4I CCNNNNNNNGG 3 cut(s) 123, 790, 848
Bse1I ACTGG 2 cut(s) 794, 894
Bse3DI GCAATG 2 cut(s) 275, 836
BseBI CCWGG 1 cut(s) 951
BseDI CCNNGG 4 cut(s) 451, 655, 706, 924
BseGI GGATG 3 cut(s) 63, 601, 651
BseLI CCNNNNNNNGG 3 cut(s) 123, 790, 848
BseMI GCAATG 2 cut(s) 275, 836
BseMII CTCAG 3 cut(s) 48, 203, 966
BseNI ACTGG 2 cut(s) 794, 894
BseRI GAGGAG 1 cut(s) 590
BseXI GCAGC 3 cut(s) 70, 200, 211
BseYI CCCAGC 1 cut(s) 191
BshFI GGCC 4 cut(s) 127, 297, 350, 449
BsiHKAI GWGCWC 1 cut(s) 783
BsiHKCI CYCGRG 1 cut(s) 488
BslI CCNNNNNNNGG 3 cut(s) 123, 790, 848
BsmAI GTCTC 5 cut(s) 37, 208, 266, 302, 734
BsmBI CGTCTC 1 cut(s) 734
BsnI GGCC 4 cut(s) 127, 297, 350, 449
BsoBI CYCGRG 1 cut(s) 488
Bsp1286I GDGCHC 1 cut(s) 783
Bsp1407I TGTACA 1 cut(s) 396
Bsp143I GATC 1 cut(s) 799
Bsp19I CCATGG 2 cut(s) 451, 655
BspACI CCGC 2 cut(s) 905, 954
BspANI GGCC 4 cut(s) 127, 297, 350, 449
BspCNI CTCAG 3 cut(s) 47, 204, 967
BspLI GGNNCC 2 cut(s) 324, 351
BspQI GCTCTTC 1 cut(s) 383
BsrDI GCAATG 2 cut(s) 275, 836
BsrGI TGTACA 1 cut(s) 396
BsrI ACTGG 2 cut(s) 794, 894
BssECI CCNNGG 4 cut(s) 451, 655, 706, 924
BssMI GATC 1 cut(s) 799
BssSI CACGAG 1 cut(s) 10
BssT1I CCWWGG 4 cut(s) 451, 655, 706, 924
Bst2BI CACGAG 1 cut(s) 10
Bst2UI CCWGG 1 cut(s) 951
Bst4CI ACNGT 1 cut(s) 415
Bst6I CTCTTC 1 cut(s) 383
BstAPI GCANNNNNTGC 1 cut(s) 415
BstAUI TGTACA 1 cut(s) 396
BstBAI YACGTR 1 cut(s) 702
BstC8I GCNNGC 2 cut(s) 129, 222
BstDEI CTNAG 4 cut(s) 34, 212, 975, 988
BstDSI CCRYGG 2 cut(s) 451, 655
BstF5I GGATG 3 cut(s) 63, 601, 651
BstKTI GATC 1 cut(s) 802
BstMAI GTCTC 5 cut(s) 37, 208, 266, 302, 734
BstMBI GATC 1 cut(s) 799
BstMWI GCNNNNNNNGC 2 cut(s) 415, 989
BstNI CCWGG 1 cut(s) 951
BstNSI RCATGY 4 cut(s) 403, 478, 948, 1001
BstSCI CCNGG 1 cut(s) 949
BstSNI TACGTA 1 cut(s) 702
BstV1I GCAGC 3 cut(s) 70, 200, 211
BstV2I GAAGAC 2 cut(s) 94, 902
BstXI CCANNNNNNTGG 1 cut(s) 656
BsuI GTATCC 1 cut(s) 654
BsuRI GGCC 4 cut(s) 127, 297, 350, 449
BtgI CCRYGG 2 cut(s) 451, 655
BtsCI GGATG 3 cut(s) 63, 601, 651
BtsIMutI CAGTG 1 cut(s) 420
Cac8I GCNNGC 2 cut(s) 129, 222
Cfr13I GGNCC 3 cut(s) 125, 349, 448
Csp6I GTAC 3 cut(s) 397, 472, 703
CviQI GTAC 3 cut(s) 397, 472, 703
DdeI CTNAG 4 cut(s) 34, 212, 975, 988
DpnI GATC 1 cut(s) 801
DpnII GATC 1 cut(s) 799
DraIII CACNNNGTG 1 cut(s) 415
Eam1104I CTCTTC 1 cut(s) 383
EarI CTCTTC 1 cut(s) 383
Eco105I TACGTA 1 cut(s) 702
Eco130I CCWWGG 4 cut(s) 451, 655, 706, 924
Eco57I CTGAAG 2 cut(s) 88, 903
Eco88I CYCGRG 1 cut(s) 488
EcoRI GAATTC 1 cut(s) 207
EcoRII CCWGG 1 cut(s) 949
EcoT14I CCWWGG 4 cut(s) 451, 655, 706, 924
ErhI CCWWGG 4 cut(s) 451, 655, 706, 924
Esp3I CGTCTC 1 cut(s) 734
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 1 cut(s) 799
Fnu4HI GCNGC 3 cut(s) 84, 189, 225
FokI GGATG 3 cut(s) 50, 608, 638
Fsp4HI GCNGC 3 cut(s) 84, 189, 225
FspBI CTAG 1 cut(s) 39
GluI GCNGC 3 cut(s) 84, 189, 225
GsaI CCCAGC 1 cut(s) 195
GsuI CTGGAG 1 cut(s) 911
HaeIII GGCC 4 cut(s) 127, 297, 350, 449
HinfI GANTC 1 cut(s) 715
HphI GGTGA 2 cut(s) 592, 868
Hpy166II GTNNAC 1 cut(s) 562
Hpy188I TCNGA 3 cut(s) 213, 373, 628
Hpy188III TCNNGA 3 cut(s) 20, 326, 1063
Hpy8I GTNNAC 1 cut(s) 562
HpyAV CCTTC 3 cut(s) 448, 577, 847
HpyCH4III ACNGT 1 cut(s) 415
HpyCH4IV ACGT 1 cut(s) 701
HpyCH4V TGCA 7 cut(s) 86, 188, 280, 444, 755, 807, 875
HpyF10VI GCNNNNNNNGC 2 cut(s) 415, 989
HpyF3I CTNAG 4 cut(s) 34, 212, 975, 988
HpySE526I ACGT 1 cut(s) 701
Ksp22I TGATCA 1 cut(s) 799
Kzo9I GATC 1 cut(s) 799
LguI GCTCTTC 1 cut(s) 383
LmnI GCTCC 2 cut(s) 700, 786
Lsp1109I GCAGC 3 cut(s) 70, 200, 211
LweI GCATC 2 cut(s) 117, 140
MaeI CTAG 1 cut(s) 39
MaeII ACGT 1 cut(s) 701
MaeIII GTNAC 1 cut(s) 919
MalI GATC 1 cut(s) 801
MboI GATC 1 cut(s) 799
MboII GAAGA 4 cut(s) 94, 400, 896, 907
MfeI CAATTG 2 cut(s) 87, 500
MhlI GDGCHC 1 cut(s) 783
MmeI TCCRAC 1 cut(s) 194
MnlI CCTC 8 cut(s) 35, 169, 245, 308, 541, 568, 571, 826
MseI TTAA 3 cut(s) 507, 554, 663
MslI CAYNNNNRTG 5 cut(s) 68, 654, 723, 935, 938
MspA1I CMGCKG 1 cut(s) 191
MspR9I CCNGG 1 cut(s) 951
MunI CAATTG 2 cut(s) 87, 500
MvaI CCWGG 1 cut(s) 951
MwoI GCNNNNNNNGC 2 cut(s) 415, 989
NcoI CCATGG 2 cut(s) 451, 655
NdeI CATATG 1 cut(s) 1036
NdeII GATC 1 cut(s) 799
NlaIV GGNNCC 2 cut(s) 324, 351
NspI RCATGY 4 cut(s) 403, 478, 948, 1001
PciI ACATGT 2 cut(s) 474, 997
PciSI GCTCTTC 1 cut(s) 383
PfeI GAWTC 1 cut(s) 715
PflMI CCANNNNNTGG 1 cut(s) 848
PkrI GCNGC 3 cut(s) 85, 190, 226
Ppu21I YACGTR 1 cut(s) 702
PscI ACATGT 2 cut(s) 474, 997
PsiI TTATAA 1 cut(s) 359
Psp6I CCWGG 1 cut(s) 949
PspFI CCCAGC 1 cut(s) 191
PspGI CCWGG 1 cut(s) 949
PspN4I GGNNCC 2 cut(s) 324, 351
PspPI GGNCC 3 cut(s) 125, 349, 448
PvuII CAGCTG 1 cut(s) 191
RsaI GTAC 3 cut(s) 398, 473, 704
RsaNI GTAC 3 cut(s) 397, 472, 703
RseI CAYNNNNRTG 5 cut(s) 68, 654, 723, 935, 938
SapI GCTCTTC 1 cut(s) 383
SaqAI TTAA 3 cut(s) 507, 554, 663
SatI GCNGC 3 cut(s) 84, 189, 225
Sau3AI GATC 1 cut(s) 799
Sau96I GGNCC 3 cut(s) 125, 349, 448
ScrFI CCNGG 1 cut(s) 951
SduI GDGCHC 1 cut(s) 783
SfaNI GCATC 2 cut(s) 117, 140
SmiMI CAYNNNNRTG 5 cut(s) 68, 654, 723, 935, 938
SmlI CTYRAG 3 cut(s) 377, 404, 1061
SmoI CTYRAG 3 cut(s) 377, 404, 1061
SnaBI TACGTA 1 cut(s) 702
SsiI CCGC 2 cut(s) 905, 954
SspI AATATT 1 cut(s) 28
SspMI CTAG 1 cut(s) 39
StyD4I CCNGG 1 cut(s) 949
StyI CCWWGG 4 cut(s) 451, 655, 706, 924
TaaI ACNGT 1 cut(s) 415
TaiI ACGT 1 cut(s) 704
TaqI TCGA 1 cut(s) 1011
TatI WGTACW 2 cut(s) 396, 471
TfiI GAWTC 1 cut(s) 715
Tru1I TTAA 3 cut(s) 507, 554, 663
Tru9I TTAA 3 cut(s) 507, 554, 663
TscAI CASTG 1 cut(s) 420
TseI GCWGC 3 cut(s) 83, 188, 224
TspDTI ATGAA 3 cut(s) 46, 333, 345
TspRI CASTG 1 cut(s) 420
Van91I CCANNNNNTGG 1 cut(s) 848
XapI RAATTY 7 cut(s) 52, 165, 196, 207, 538, 869, 1019
XceI RCATGY 4 cut(s) 403, 478, 948, 1001
XspI CTAG 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.