pycom10g21380
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
24017615 .. 24019311
1697 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g21380.1

Sequence Viewer

Length: 1086 bp
ATGGAGGAAAACCAAAGAAGCATTGAAAATATTGTGTCAGCTAGGAGTTTGATGAATTTCATTCCCCTCCAAATGACTCTGGAAGCTGCCATTGAGCTAAATGTCTTCAGCATCATTGCCAAATCAGGCCCTACAGGATCTCATCTCACTGCAAAAGAAATCGCTTCCCAAATTCCGACTTCGAATCCGAATTCAGCCCGGAATTTGGACAGAATACTAAGAATGCTGGCCGTCCATTCCCTCCTCTCGACCTCTCTAAAACCGTCTGCGGACAACGAGGCATTGCAAGACAGGGCTTATGGCCTCACAAAGGAGACACTTTGCTTGGTGCCGGATGAAAATGGAGTCTCATTAGCTCCATTGATTAGTTTCAACTGTGAGCTTGACATTGTGAAGAGCCTTTCCATGCTCAAGGATTCCGTGCTCGAACCGGAGATTGTGCCCTTCCACAAGGCTCATGGAACCACCATATTTGAGTACATGTCCACGAAAGCTGAGCTGAGCCAGTTATTTAATAAGTCCATGGCAGAGAGTTCTAACCTAAATTTTGATGAGGTGTTGAAGGTTTATAAGGGTTTTGAAGAGGTGAAAGAGTTGATGGATGTTGGAGGTGGAATTGGAAAAACCATTTGGAAAGTAGTTTCCAAGTATCCCCACGTCCATGGAATTAACTTCGATTTGCCTAATGTTGTTGCTCAAGCTCCTCCTTACCAAGGTGTGAATCATATCGGTGGAAATATGTTTGAGACCATACCAAATGCACAATCAATTATGCTGAAGTGGGTGCTCCACAACTGGGAAGACGACCGGTGCAAGAAATTATTGAAAAGCTGTTGGGAGGCATTACCAAAAAATGGGAAGGTGATAGTTGTGGAATTTACAATTCCAGAAGTATTGGAGAATACTAAAGCAGTGCTGAACATAGTAACGTTGGACATCTCAATGATGGCATTGCCTGGTGGTAGAGAAAGAACAACTGCTGAATTTGATAACTTAGCAAAATCTGTGGGTTTTGTGGAAACAACGATTTTTCCAATCGCACAGGGGATTTGTGTTATGGAATTTCTCAAGAGGGAAGAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

362

Amino Acids

40.0

Weight (kDa)

5.4

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 18 - 104 1.3e-11 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 136 - 338 1.1e-58 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 570
AccB1I GGYRCC 1 cut(s) 328
AccB7I CCANNNNNTGG 1 cut(s) 854
AciI CCGC 1 cut(s) 269
AclI AACGTT 1 cut(s) 929
AclWI GGATC 1 cut(s) 145
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 8 cut(s) 55, 171, 190, 202, 544, 875, 983, 1061
AcuI CTGAAG 2 cut(s) 91, 797
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 5 cut(s) 205, 310, 713, 796, 854
AflIII ACRYGT 1 cut(s) 480
AgeI ACCGGT 1 cut(s) 807
AgsI TTSAA 5 cut(s) 26, 373, 562, 581, 826
AjiI CACGTC 1 cut(s) 658
AjnI CCWGG 1 cut(s) 955
AjuI GAANNNNNNNTTGG 2 cut(s) 613, 645
AluBI AGCT 9 cut(s) 41, 86, 97, 356, 382, 494, 499, 701, 831
AluI AGCT 9 cut(s) 41, 86, 97, 356, 382, 494, 499, 701, 831
Alw21I GWGCWC 2 cut(s) 426, 789
Alw26I GTCTC 3 cut(s) 308, 352, 740
AlwI GGATC 1 cut(s) 145
AoxI GGCC 3 cut(s) 127, 228, 301
ApeKI GCWGC 1 cut(s) 86
ApoI RAATTY 8 cut(s) 55, 171, 190, 202, 544, 875, 983, 1061
AsiGI ACCGGT 1 cut(s) 807
AspS9I GGNCC 1 cut(s) 128
AsuC2I CCSGG 1 cut(s) 199
AsuHPI GGTGA 2 cut(s) 598, 874
AsuII TTCGAA 1 cut(s) 182
BaeGI GKGCMC 1 cut(s) 444
BanI GGYRCC 1 cut(s) 328
BbsI GAAGAC 2 cut(s) 97, 807
Bbv12I GWGCWC 2 cut(s) 426, 789
BbvI GCAGC 1 cut(s) 73
BccI CCATC 2 cut(s) 592, 940
BceAI ACGGC 1 cut(s) 215
BciT130I CCWGG 1 cut(s) 957
BciVI GTATCC 1 cut(s) 660
BcnI CCSGG 1 cut(s) 199
BcoDI GTCTC 3 cut(s) 308, 352, 740
BfaI CTAG 1 cut(s) 42
BfmI CTRYAG 1 cut(s) 132
BfuI GTATCC 1 cut(s) 660
BisI GCNGC 1 cut(s) 87
BlpI GCTNAGC 2 cut(s) 495, 500
BlsI GCNGC 1 cut(s) 88
Bme1390I CCNGG 2 cut(s) 199, 957
BmgBI CACGTC 1 cut(s) 658
BmgT120I GGNCC 1 cut(s) 128
BmiI GGNNCC 2 cut(s) 330, 463
BmrFI CCNGG 2 cut(s) 199, 957
BmrI ACTGGG 1 cut(s) 805
BmsI GCATC 1 cut(s) 120
BmuI ACTGGG 1 cut(s) 805
BpiI GAAGAC 2 cut(s) 97, 807
Bpu1102I GCTNAGC 2 cut(s) 495, 500
Bpu14I TTCGAA 1 cut(s) 182
BpuEI CTTGAG 3 cut(s) 395, 681, 1052
BpuMI CCSGG 1 cut(s) 199
BsaI GGTCTC 1 cut(s) 740
BsaJI CCNNGG 3 cut(s) 522, 661, 712
BsaWI WCCGGW 2 cut(s) 430, 807
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 310, 713, 796, 854
Bse118I RCCGGY 1 cut(s) 807
Bse1I ACTGG 2 cut(s) 505, 800
Bse3DI GCAATG 3 cut(s) 114, 281, 950
BseBI CCWGG 1 cut(s) 957
BseDI CCNNGG 3 cut(s) 522, 661, 712
BseGI GGATG 2 cut(s) 340, 607
BseLI CCNNNNNNNGG 5 cut(s) 205, 310, 713, 796, 854
BseMI GCAATG 3 cut(s) 114, 281, 950
BseMII CTCAG 2 cut(s) 486, 491
BseNI ACTGG 2 cut(s) 505, 800
BseRI GAGGAG 2 cut(s) 233, 693
BseSI GKGCMC 1 cut(s) 444
BseXI GCAGC 1 cut(s) 73
Bsh1285I CGRYCG 1 cut(s) 808
BshFI GGCC 3 cut(s) 129, 230, 303
BshNI GGYRCC 1 cut(s) 328
BshTI ACCGGT 1 cut(s) 807
BsiEI CGRYCG 1 cut(s) 808
BsiHKAI GWGCWC 2 cut(s) 426, 789
BsiSI CCGG 4 cut(s) 199, 332, 431, 808
BslI CCNNNNNNNGG 5 cut(s) 205, 310, 713, 796, 854
BsmAI GTCTC 3 cut(s) 308, 352, 740
BsmI GAATGC 1 cut(s) 228
BsnI GGCC 3 cut(s) 129, 230, 303
Bso31I GGTCTC 1 cut(s) 740
Bsp119I TTCGAA 1 cut(s) 182
Bsp1286I GDGCHC 3 cut(s) 426, 444, 789
Bsp143I GATC 1 cut(s) 137
Bsp1720I GCTNAGC 2 cut(s) 495, 500
Bsp19I CCATGG 2 cut(s) 522, 661
BspACI CCGC 1 cut(s) 269
BspANI GGCC 3 cut(s) 129, 230, 303
BspCNI CTCAG 2 cut(s) 487, 492
BspLI GGNNCC 2 cut(s) 330, 463
BspPI GGATC 1 cut(s) 145
BspQI GCTCTTC 1 cut(s) 389
BspT104I TTCGAA 1 cut(s) 182
BspT107I GGYRCC 1 cut(s) 328
BspTNI GGTCTC 1 cut(s) 740
BsrDI GCAATG 3 cut(s) 114, 281, 950
BsrFI RCCGGY 1 cut(s) 807
BsrI ACTGG 2 cut(s) 505, 800
BssAI RCCGGY 1 cut(s) 807
BssECI CCNNGG 3 cut(s) 522, 661, 712
BssMI GATC 1 cut(s) 137
BssT1I CCWWGG 3 cut(s) 522, 661, 712
Bst2UI CCWGG 1 cut(s) 957
Bst4CI ACNGT 2 cut(s) 264, 377
Bst6I CTCTTC 2 cut(s) 389, 576
BstBI TTCGAA 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 228
BstDEI CTNAG 4 cut(s) 218, 495, 500, 994
BstDSI CCRYGG 2 cut(s) 522, 661
BstENI CCTNNNNNAGG 2 cut(s) 308, 711
BstF5I GGATG 2 cut(s) 340, 607
BstKTI GATC 1 cut(s) 140
BstMAI GTCTC 3 cut(s) 308, 352, 740
BstMBI GATC 1 cut(s) 137
BstMCI CGRYCG 1 cut(s) 808
BstNI CCWGG 1 cut(s) 957
BstNSI RCATGY 1 cut(s) 484
BstSCI CCNGG 2 cut(s) 197, 955
BstSFI CTRYAG 1 cut(s) 132
BstSLI GKGCMC 1 cut(s) 444
BstV1I GCAGC 1 cut(s) 73
BstV2I GAAGAC 2 cut(s) 97, 807
BstX2I RGATCY 1 cut(s) 137
BstXI CCANNNNNNTGG 1 cut(s) 662
BstYI RGATCY 1 cut(s) 137
BsuI GTATCC 1 cut(s) 660
BsuRI GGCC 3 cut(s) 129, 230, 303
BtgI CCRYGG 2 cut(s) 522, 661
BtrI CACGTC 1 cut(s) 658
BtsCI GGATG 2 cut(s) 340, 607
BtsI GCAGTG 2 cut(s) 147, 918
BtsIMutI CAGTG 2 cut(s) 147, 918
Cac8I GCNNGC 1 cut(s) 228
Cfr10I RCCGGY 1 cut(s) 807
Cfr13I GGNCC 1 cut(s) 128
Csp6I GTAC 1 cut(s) 478
CspAI ACCGGT 1 cut(s) 807
CspCI CAANNNNNGTGG 4 cut(s) 454, 489, 987, 1022
CviAII CATG 6 cut(s) 406, 458, 481, 523, 662, 1083
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 4 cut(s) 218, 495, 500, 994
DpnI GATC 1 cut(s) 139
DpnII GATC 1 cut(s) 137
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 2 cut(s) 389, 576
EarI CTCTTC 2 cut(s) 389, 576
Eco130I CCWWGG 3 cut(s) 522, 661, 712
Eco31I GGTCTC 1 cut(s) 740
Eco57I CTGAAG 2 cut(s) 91, 797
EcoNI CCTNNNNNAGG 2 cut(s) 308, 711
EcoO109I RGGNCCY 1 cut(s) 128
EcoRI GAATTC 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 955
EcoT14I CCWWGG 3 cut(s) 522, 661, 712
ErhI CCWWGG 3 cut(s) 522, 661, 712
FaeI CATG 6 cut(s) 409, 461, 484, 526, 665, 1086
FatI CATG 6 cut(s) 405, 457, 480, 522, 661, 1082
Fnu4HI GCNGC 1 cut(s) 87
FokI GGATG 2 cut(s) 347, 614
Fsp4HI GCNGC 1 cut(s) 87
FspBI CTAG 1 cut(s) 42
GluI GCNGC 1 cut(s) 87
HaeIII GGCC 3 cut(s) 129, 230, 303
HapII CCGG 4 cut(s) 199, 332, 431, 808
Hin1II CATG 6 cut(s) 409, 461, 484, 526, 665, 1086
HinfI GANTC 5 cut(s) 76, 184, 345, 416, 721
HpaII CCGG 4 cut(s) 199, 332, 431, 808
HphI GGTGA 2 cut(s) 598, 874
Hpy166II GTNNAC 1 cut(s) 486
Hpy188I TCNGA 2 cut(s) 177, 189
Hpy188III TCNNGA 4 cut(s) 80, 247, 887, 1069
Hpy8I GTNNAC 1 cut(s) 486
HpyAV CCTTC 3 cut(s) 454, 556, 853
HpyCH4III ACNGT 2 cut(s) 264, 377
HpyCH4IV ACGT 2 cut(s) 657, 929
HpyCH4V TGCA 4 cut(s) 152, 286, 761, 813
HpyF3I CTNAG 4 cut(s) 218, 495, 500, 994
HpySE526I ACGT 2 cut(s) 657, 929
Hsp92II CATG 6 cut(s) 409, 461, 484, 526, 665, 1086
Kzo9I GATC 1 cut(s) 137
LguI GCTCTTC 1 cut(s) 389
LmnI GCTCC 3 cut(s) 361, 706, 792
Lsp1109I GCAGC 1 cut(s) 73
LweI GCATC 1 cut(s) 120
MaeI CTAG 1 cut(s) 42
MaeII ACGT 2 cut(s) 657, 929
MaeIII GTNAC 1 cut(s) 925
MalI GATC 1 cut(s) 139
MboI GATC 1 cut(s) 137
MboII GAAGA 4 cut(s) 97, 406, 593, 812
MflI RGATCY 1 cut(s) 137
MhlI GDGCHC 3 cut(s) 426, 444, 789
MlyI GAGTC 2 cut(s) 70, 354
MmeI TCCRAC 3 cut(s) 200, 586, 912
MseI TTAA 2 cut(s) 513, 669
MslI CAYNNNNRTG 3 cut(s) 660, 729, 941
MspI CCGG 4 cut(s) 199, 332, 431, 808
MspR9I CCNGG 2 cut(s) 199, 957
Mva1269I GAATGC 1 cut(s) 228
MvaI CCWGG 1 cut(s) 957
NciI CCSGG 1 cut(s) 199
NcoI CCATGG 2 cut(s) 522, 661
NdeII GATC 1 cut(s) 137
NlaIII CATG 6 cut(s) 409, 461, 484, 526, 665, 1086
NlaIV GGNNCC 2 cut(s) 330, 463
NspI RCATGY 1 cut(s) 484
NspV TTCGAA 1 cut(s) 182
PciI ACATGT 1 cut(s) 480
PciSI GCTCTTC 1 cut(s) 389
PctI GAATGC 1 cut(s) 228
PfeI GAWTC 3 cut(s) 184, 416, 721
PflMI CCANNNNNTGG 1 cut(s) 854
PinAI ACCGGT 1 cut(s) 807
PkrI GCNGC 1 cut(s) 88
PleI GAGTC 2 cut(s) 70, 353
PpsI GAGTC 2 cut(s) 70, 353
PscI ACATGT 1 cut(s) 480
PsiI TTATAA 1 cut(s) 570
Psp1406I AACGTT 1 cut(s) 929
Psp6I CCWGG 1 cut(s) 955
PspGI CCWGG 1 cut(s) 955
PspN4I GGNNCC 2 cut(s) 330, 463
PspPI GGNCC 1 cut(s) 128
PsuI RGATCY 1 cut(s) 137
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
RseI CAYNNNNRTG 3 cut(s) 660, 729, 941
SapI GCTCTTC 1 cut(s) 389
SaqAI TTAA 2 cut(s) 513, 669
SatI GCNGC 1 cut(s) 87
Sau3AI GATC 1 cut(s) 137
Sau96I GGNCC 1 cut(s) 128
SchI GAGTC 2 cut(s) 70, 354
ScrFI CCNGG 2 cut(s) 199, 957
SduI GDGCHC 3 cut(s) 426, 444, 789
SfaNI GCATC 1 cut(s) 120
SfcI CTRYAG 1 cut(s) 132
SfuI TTCGAA 1 cut(s) 182
SmiMI CAYNNNNRTG 3 cut(s) 660, 729, 941
SmlI CTYRAG 3 cut(s) 410, 696, 1067
SmoI CTYRAG 3 cut(s) 410, 696, 1067
SsiI CCGC 1 cut(s) 269
SspI AATATT 1 cut(s) 31
SspMI CTAG 1 cut(s) 42
StyD4I CCNGG 2 cut(s) 197, 955
StyI CCWWGG 3 cut(s) 522, 661, 712
TaaI ACNGT 2 cut(s) 264, 377
TaiI ACGT 2 cut(s) 660, 932
TaqI TCGA 4 cut(s) 182, 248, 426, 675
TatI WGTACW 1 cut(s) 477
TfiI GAWTC 3 cut(s) 184, 416, 721
Tru1I TTAA 2 cut(s) 513, 669
Tru9I TTAA 2 cut(s) 513, 669
TscAI CASTG 2 cut(s) 154, 918
TseI GCWGC 1 cut(s) 86
TspDTI ATGAA 3 cut(s) 49, 68, 351
TspGWI ACGGA 1 cut(s) 409
TspRI CASTG 2 cut(s) 154, 918
Van91I CCANNNNNTGG 1 cut(s) 854
XagI CCTNNNNNAGG 2 cut(s) 308, 711
XapI RAATTY 8 cut(s) 55, 171, 190, 202, 544, 875, 983, 1061
XceI RCATGY 1 cut(s) 484
XcmI CCANNNNNNNNNTGG 1 cut(s) 455
XspI CTAG 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.