Rorug07G0117600
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
9207805 .. 9219851
12047 bp
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UTR
Exon/CDS
Intron
Rorug07G0117600.1

Sequence Viewer

Length: 1518 bp
ATGTTGAACCTGTTTGTATTTGCTGTTCCCTTACTCTTGTTCACAATCTTCCTCATCAAATGGTTTTCCACTACAAACAAGCACAATCATTTGCCTCCATCACCACCAAGGCTCCCAATACTAGGAAACCTCCACCAACTTGGCAAGCGCCCTCACCGATCCCTCCAACAACTAGCTCAGCACCATGGTGAACTCATAATGCTTCATTTCGGTTCCAGACCTGTGCTCATAGTTTCATCTGCAGATGCTGCTCGCGAAATCATGAAAACAAATGATCTCATCTTCTCTAACAAACCCAAATTAACAATTATTGATAGACTTCTGTACGAAGGCAAGGATGTGTCCACAGCTCCTTACGGTGAGTATTGGAGGCAAGTAAGAAGCATATGCGTGCTCCAGCTTTTAAGTAACAAAAAGGTTCAGTCTTTCCGAGGAGTTAGAGAAGAAGAAATAGCCTTGCTGATTGAGAATGTCAAACAGTCGTCTATGTTGTCACTGCCGGTCAATCTAAGCGAATTGTTTTCTATGCTTACTAATGATGTGATTTGTAGGGTGGCTTTTGGGAGGAAGTATAGTGGTGGTGAAGGTGCAATGAAGTTCAAAAAGTTGCTTGGGGAATTTATGGAGGTGTTGGGTGGTTTTTGTGTTGGAGATTTTATTCCATGGCTTTCTTGGGTTAGTCGCTTTAGTGGGTTAGATGCAAGAGTGGAGAAAGTTTTTAAAGAATTTGATGGATTTCTTGATACAGTACTTGAGGATCATATGGTTAATCTTAGCACGAAGGGAGATATAGGTAGTATAGAAGGTGAAGATAGAAAGGATTTTGTGGATGTCCTGCTTGAAGTTCAAAAGAATAACATCACTGGCTCTTCCATTGATCGAGATGGGATTAAAGCTGTCATCTTGGATATGTTTGCGGGTGGAACTGATACAACCTCCACAGTTCTAGAGTGGGCGATGACTGAACTCATAAGGCATCCCAGAGTGATGAAAAGACTGCAAAATGAGGTTATGGGAATTGCTAATGGAAAACAAGACATAACAGAAAGTGACTTGGACAAAATGCCATACTTGAAAGCTGTGATCAAAGAAACACTAAGGCTGTATCCTCCAATACCGTTGTTGAGCATTCGAGAATCAACCCAAGATGTTAAAGTAAAGGGCTATGACATAGCTGCAAGAACCATGGTCCTAGTCAATGCCTGGACAATTGGAAGAGACCCTTCTCTGTGGGATGAACCAGAGGAGTTTCAACCTGATAGATTTATGAATTCTTCGGTGGACTTCAAAGGCCAGGACTTCCAATTAGTCCCATTTGGAGCTGGCAGAAGAGGTTGCCCGGGAATCTTATTTGCCATTACCACTAATGAGCTTGTGTTAGCAAATCTTGTGCACAAGTTTCAGTGGGCATTGCCTAGTGGAGCTACAGCTGAGGATATGAACATGACTGAATGCAATGGTGTTGTCATCCACAAAGAAGTTCCTCTTATAGTTATGGCAGCGCCAAGGTCTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

505

Amino Acids

56.78

Weight (kDa)

6.44

Isoelectric Point (pI)

37.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 492 6.5e-109 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 255
AciI CCGC 1 cut(s) 917
AclWI GGATC 2 cut(s) 153, 765
AcsI RAATTY 3 cut(s) 617, 725, 1270
AfaI GTAC 2 cut(s) 326, 750
AfiI CCNNNNNNNGG 1 cut(s) 122
AgsI TTSAA 7 cut(s) 7, 601, 842, 848, 1075, 1253, 1288
AjnI CCWGG 2 cut(s) 1202, 1293
AleI CACNNNNGTG 1 cut(s) 186
Alw21I GWGCWC 3 cut(s) 228, 396, 1395
Alw26I GTCTC 1 cut(s) 1212
Alw44I GTGCAC 1 cut(s) 1391
AlwI GGATC 2 cut(s) 153, 765
AlwNI CAGNNNCTG 1 cut(s) 248
Ama87I CYCGRG 1 cut(s) 1339
AoxI GGCC 1 cut(s) 1291
ApaLI GTGCAC 1 cut(s) 1391
ApeKI GCWGC 3 cut(s) 248, 1175, 1499
ApoI RAATTY 3 cut(s) 617, 725, 1270
AspLEI GCGC 2 cut(s) 150, 1504
AspS9I GGNCC 1 cut(s) 1189
AsuC2I CCSGG 2 cut(s) 1340, 1341
AsuHPI GGTGA 6 cut(s) 93, 146, 200, 371, 593, 818
AvaI CYCGRG 1 cut(s) 1339
AvaII GGWCC 1 cut(s) 1189
BaeGI GKGCMC 1 cut(s) 1395
BbsI GAAGAC 1 cut(s) 1503
Bbv12I GWGCWC 3 cut(s) 228, 396, 1395
BbvCI CCTCAGC 1 cut(s) 1431
BbvI GCAGC 3 cut(s) 235, 1162, 1511
BccI CCATC 3 cut(s) 106, 725, 878
BciT130I CCWGG 2 cut(s) 1204, 1295
BciVI GTATCC 1 cut(s) 1116
BclI TGATCA 1 cut(s) 1083
BcnI CCSGG 2 cut(s) 1340, 1341
BcoDI GTCTC 1 cut(s) 1212
BfaI CTAG 5 cut(s) 122, 173, 947, 1193, 1416
BfmI CTRYAG 2 cut(s) 240, 1425
BfoI RGCGCY 2 cut(s) 151, 1505
BfuI GTATCC 1 cut(s) 1116
BisI GCNGC 3 cut(s) 249, 1176, 1500
BlpI GCTNAGC 1 cut(s) 177
BlsI GCNGC 3 cut(s) 250, 1177, 1501
BmcAI AGTACT 1 cut(s) 750
Bme1390I CCNGG 4 cut(s) 1204, 1295, 1340, 1341
Bme18I GGWCC 1 cut(s) 1189
BmeT110I CYCGRG 1 cut(s) 1339
BmgT120I GGNCC 1 cut(s) 1189
BmiI GGNNCC 2 cut(s) 113, 214
BmrFI CCNGG 4 cut(s) 1204, 1295, 1340, 1341
BmsI GCATC 3 cut(s) 235, 688, 985
BpiI GAAGAC 1 cut(s) 1503
BpmI CTGGAG 1 cut(s) 380
Bpu10I CCTNAGC 1 cut(s) 1431
Bpu1102I GCTNAGC 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 773
BpuMI CCSGG 2 cut(s) 1340, 1341
BsaI GGTCTC 1 cut(s) 1212
BsaJI CCNNGG 7 cut(s) 107, 184, 430, 662, 1185, 1339, 1505
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 1 cut(s) 122
Bse118I RCCGGY 1 cut(s) 499
Bse1I ACTGG 1 cut(s) 868
Bse3DI GCAATG 3 cut(s) 597, 1409, 1462
BseBI CCWGG 2 cut(s) 1204, 1295
BseDI CCNNGG 7 cut(s) 107, 184, 430, 662, 1185, 1339, 1505
BseGI GGATG 5 cut(s) 343, 835, 976, 1240, 1467
BseLI CCNNNNNNNGG 1 cut(s) 122
BseMI GCAATG 3 cut(s) 597, 1409, 1462
BseMII CTCAG 2 cut(s) 191, 1422
BseNI ACTGG 1 cut(s) 868
BseRI GAGGAG 2 cut(s) 447, 1259
BseSI GKGCMC 1 cut(s) 1395
BseXI GCAGC 3 cut(s) 235, 1162, 1511
Bsh1236I CGCG 1 cut(s) 255
BshFI GGCC 1 cut(s) 1293
BsiHKAI GWGCWC 3 cut(s) 228, 396, 1395
BsiHKCI CYCGRG 1 cut(s) 1339
BsiSI CCGG 2 cut(s) 500, 1340
BslFI GGGAC 1 cut(s) 1295
BslI CCNNNNNNNGG 1 cut(s) 122
BsmAI GTCTC 1 cut(s) 1212
BsmFI GGGAC 1 cut(s) 1295
BsmI GAATGC 2 cut(s) 1128, 1457
BsnI GGCC 1 cut(s) 1293
Bso31I GGTCTC 1 cut(s) 1212
BsoBI CYCGRG 1 cut(s) 1339
Bsp1286I GDGCHC 3 cut(s) 228, 396, 1395
Bsp143I GATC 5 cut(s) 158, 274, 757, 877, 1083
Bsp1720I GCTNAGC 1 cut(s) 177
Bsp19I CCATGG 3 cut(s) 184, 662, 1185
Bsp68I TCGCGA 1 cut(s) 255
BspACI CCGC 1 cut(s) 917
BspANI GGCC 1 cut(s) 1293
BspCNI CTCAG 2 cut(s) 190, 1423
BspFNI CGCG 1 cut(s) 255
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 2 cut(s) 113, 214
BspMAI CTGCAG 1 cut(s) 244
BspPI GGATC 2 cut(s) 153, 765
BspQI GCTCTTC 1 cut(s) 874
BspTNI GGTCTC 1 cut(s) 1212
BsrDI GCAATG 3 cut(s) 597, 1409, 1462
BsrFI RCCGGY 1 cut(s) 499
BsrI ACTGG 1 cut(s) 868
BssAI RCCGGY 1 cut(s) 499
BssECI CCNNGG 7 cut(s) 107, 184, 430, 662, 1185, 1339, 1505
BssMI GATC 5 cut(s) 158, 274, 757, 877, 1083
BssT1I CCWWGG 5 cut(s) 107, 184, 662, 1185, 1505
Bst2UI CCWGG 2 cut(s) 1204, 1295
Bst4CI ACNGT 5 cut(s) 359, 480, 748, 943, 1119
Bst6I CTCTTC 3 cut(s) 874, 1210, 1324
BstAPI GCANNNNNTGC 1 cut(s) 248
BstC8I GCNNGC 4 cut(s) 146, 253, 392, 1324
BstDEI CTNAG 5 cut(s) 177, 509, 773, 1097, 1431
BstDSI CCRYGG 3 cut(s) 184, 662, 1185
BstF5I GGATG 5 cut(s) 343, 835, 976, 1240, 1467
BstFNI CGCG 1 cut(s) 255
BstH2I RGCGCY 2 cut(s) 151, 1505
BstHHI GCGC 2 cut(s) 150, 1504
BstKTI GATC 5 cut(s) 161, 277, 760, 880, 1086
BstMAI GTCTC 1 cut(s) 1212
BstMBI GATC 5 cut(s) 158, 274, 757, 877, 1083
BstMWI GCNNNNNNNGC 1 cut(s) 248
BstNI CCWGG 2 cut(s) 1204, 1295
BstSCI CCNGG 4 cut(s) 1202, 1293, 1338, 1339
BstSFI CTRYAG 2 cut(s) 240, 1425
BstSLI GKGCMC 1 cut(s) 1395
BstUI CGCG 1 cut(s) 255
BstV1I GCAGC 3 cut(s) 235, 1162, 1511
BstV2I GAAGAC 1 cut(s) 1503
BstXI CCANNNNNNTGG 1 cut(s) 140
BsuI GTATCC 1 cut(s) 1116
BsuRI GGCC 1 cut(s) 1293
BtgI CCRYGG 3 cut(s) 184, 662, 1185
BtgZI GCGATG 1 cut(s) 971
BtsCI GGATG 5 cut(s) 343, 835, 976, 1240, 1467
BtsI GCAGTG 1 cut(s) 494
BtsIMutI CAGTG 3 cut(s) 494, 861, 1409
BtuMI TCGCGA 1 cut(s) 255
Cac8I GCNNGC 4 cut(s) 146, 253, 392, 1324
CaiI CAGNNNCTG 1 cut(s) 248
CciI TCATGA 1 cut(s) 261
CfoI GCGC 2 cut(s) 150, 1504
Cfr10I RCCGGY 1 cut(s) 499
Cfr13I GGNCC 1 cut(s) 1189
Cfr9I CCCGGG 1 cut(s) 1339
Csp6I GTAC 2 cut(s) 325, 749
CviAII CATG 5 cut(s) 185, 262, 663, 1186, 1444
CviQI GTAC 2 cut(s) 325, 749
DdeI CTNAG 5 cut(s) 177, 509, 773, 1097, 1431
DpnI GATC 5 cut(s) 160, 276, 759, 879, 1085
DpnII GATC 5 cut(s) 158, 274, 757, 877, 1083
DraI TTTAAA 1 cut(s) 721
Eam1104I CTCTTC 3 cut(s) 874, 1210, 1324
EarI CTCTTC 3 cut(s) 874, 1210, 1324
Eco130I CCWWGG 5 cut(s) 107, 184, 662, 1185, 1505
Eco31I GGTCTC 1 cut(s) 1212
Eco47I GGWCC 1 cut(s) 1189
Eco88I CYCGRG 1 cut(s) 1339
EcoRI GAATTC 1 cut(s) 1270
EcoRII CCWGG 2 cut(s) 1202, 1293
EcoT14I CCWWGG 5 cut(s) 107, 184, 662, 1185, 1505
ErhI CCWWGG 5 cut(s) 107, 184, 662, 1185, 1505
FaeI CATG 5 cut(s) 188, 265, 666, 1189, 1447
FalI AAGNNNNNCTT 5 cut(s) 1207, 1239, 1470, 1502, 1498
FaqI GGGAC 1 cut(s) 1295
FatI CATG 5 cut(s) 184, 261, 662, 1185, 1443
FauI CCCGC 1 cut(s) 910
FauNDI CATATG 2 cut(s) 386, 762
FbaI TGATCA 1 cut(s) 1083
Fnu4HI GCNGC 3 cut(s) 249, 1176, 1500
FokI GGATG 5 cut(s) 350, 842, 963, 1247, 1454
Fsp4HI GCNGC 3 cut(s) 249, 1176, 1500
FspBI CTAG 5 cut(s) 122, 173, 947, 1193, 1416
GlaI GCGC 2 cut(s) 149, 1503
GluI GCNGC 3 cut(s) 249, 1176, 1500
GsuI CTGGAG 1 cut(s) 380
HaeII RGCGCY 2 cut(s) 151, 1505
HaeIII GGCC 1 cut(s) 1293
HapII CCGG 2 cut(s) 500, 1340
HhaI GCGC 2 cut(s) 150, 1504
Hin1II CATG 5 cut(s) 188, 265, 666, 1189, 1447
Hin6I GCGC 2 cut(s) 148, 1502
HinP1I GCGC 2 cut(s) 148, 1502
HinfI GANTC 2 cut(s) 1136, 1344
HpaII CCGG 2 cut(s) 500, 1340
HphI GGTGA 6 cut(s) 93, 146, 200, 371, 593, 818
Hpy166II GTNNAC 5 cut(s) 42, 191, 345, 1282, 1393
Hpy188I TCNGA 1 cut(s) 431
Hpy188III TCNNGA 7 cut(s) 216, 254, 262, 740, 881, 947, 1133
Hpy8I GTNNAC 5 cut(s) 42, 191, 345, 1282, 1393
HpyAV CCTTC 5 cut(s) 323, 578, 775, 797, 1233
HpyCH4III ACNGT 5 cut(s) 359, 480, 748, 943, 1119
HpyCH4V TGCA 7 cut(s) 242, 590, 701, 1000, 1178, 1393, 1455
HpyF10VI GCNNNNNNNGC 1 cut(s) 248
HpyF3I CTNAG 5 cut(s) 177, 509, 773, 1097, 1431
Hsp92II CATG 5 cut(s) 188, 265, 666, 1189, 1447
HspAI GCGC 2 cut(s) 148, 1502
Ksp22I TGATCA 1 cut(s) 1083
Kzo9I GATC 5 cut(s) 158, 274, 757, 877, 1083
LguI GCTCTTC 1 cut(s) 874
LmnI GCTCC 5 cut(s) 117, 355, 399, 1319, 1421
Lsp1109I GCAGC 3 cut(s) 235, 1162, 1511
LweI GCATC 3 cut(s) 235, 688, 985
MaeI CTAG 5 cut(s) 122, 173, 947, 1193, 1416
MaeIII GTNAC 3 cut(s) 407, 492, 1049
MalI GATC 5 cut(s) 160, 276, 759, 879, 1085
MboI GATC 5 cut(s) 158, 274, 757, 877, 1083
MfeI CAATTG 1 cut(s) 1209
MhlI GDGCHC 3 cut(s) 228, 396, 1395
MluCI AATT 9 cut(s) 299, 306, 515, 617, 725, 1017, 1209, 1270, 1304
MmeI TCCRAC 2 cut(s) 190, 628
MseI TTAA 7 cut(s) 302, 404, 720, 768, 891, 1152, 1516
MslI CAYNNNNRTG 2 cut(s) 186, 389
MspA1I CMGCKG 1 cut(s) 1430
MspI CCGG 2 cut(s) 500, 1340
MspR9I CCNGG 4 cut(s) 1204, 1295, 1340, 1341
MunI CAATTG 1 cut(s) 1209
Mva1269I GAATGC 2 cut(s) 1128, 1457
MvaI CCWGG 2 cut(s) 1204, 1295
MvnI CGCG 1 cut(s) 255
MwoI GCNNNNNNNGC 1 cut(s) 248
NciI CCSGG 2 cut(s) 1340, 1341
NcoI CCATGG 3 cut(s) 184, 662, 1185
NdeI CATATG 2 cut(s) 386, 762
NdeII GATC 5 cut(s) 158, 274, 757, 877, 1083
NlaIII CATG 5 cut(s) 188, 265, 666, 1189, 1447
NlaIV GGNNCC 2 cut(s) 113, 214
NmuCI GTSAC 2 cut(s) 492, 1049
NruI TCGCGA 1 cut(s) 255
OliI CACNNNNGTG 1 cut(s) 186
PagI TCATGA 1 cut(s) 261
PciSI GCTCTTC 1 cut(s) 874
PctI GAATGC 2 cut(s) 1128, 1457
PfeI GAWTC 2 cut(s) 1136, 1344
PkrI GCNGC 3 cut(s) 250, 1177, 1501
Psp6I CCWGG 2 cut(s) 1202, 1293
PspGI CCWGG 2 cut(s) 1202, 1293
PspN4I GGNNCC 2 cut(s) 113, 214
PspPI GGNCC 1 cut(s) 1189
PsrI GAACNNNNNNTAC 2 cut(s) 9, 41
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 248
PvuII CAGCTG 1 cut(s) 1430
RruI TCGCGA 1 cut(s) 255
RsaI GTAC 2 cut(s) 326, 750
RsaNI GTAC 2 cut(s) 325, 749
RseI CAYNNNNRTG 2 cut(s) 186, 389
SapI GCTCTTC 1 cut(s) 874
SaqAI TTAA 7 cut(s) 302, 404, 720, 768, 891, 1152, 1516
SatI GCNGC 3 cut(s) 249, 1176, 1500
Sau3AI GATC 5 cut(s) 158, 274, 757, 877, 1083
Sau96I GGNCC 1 cut(s) 1189
ScaI AGTACT 1 cut(s) 750
ScrFI CCNGG 4 cut(s) 1204, 1295, 1340, 1341
SduI GDGCHC 3 cut(s) 228, 396, 1395
SfaNI GCATC 3 cut(s) 235, 688, 985
SfcI CTRYAG 2 cut(s) 240, 1425
SinI GGWCC 1 cut(s) 1189
SmaI CCCGGG 1 cut(s) 1341
SmiMI CAYNNNNRTG 2 cut(s) 186, 389
SmlI CTYRAG 1 cut(s) 752
SmoI CTYRAG 1 cut(s) 752
Sse9I AATT 9 cut(s) 299, 306, 515, 617, 725, 1017, 1209, 1270, 1304
SsiI CCGC 1 cut(s) 917
SspMI CTAG 5 cut(s) 122, 173, 947, 1193, 1416
StyD4I CCNGG 4 cut(s) 1202, 1293, 1338, 1339
StyI CCWWGG 5 cut(s) 107, 184, 662, 1185, 1505
TaaI ACNGT 5 cut(s) 359, 480, 748, 943, 1119
TaqI TCGA 2 cut(s) 880, 1132
TasI AATT 9 cut(s) 299, 306, 515, 617, 725, 1017, 1209, 1270, 1304
TatI WGTACW 1 cut(s) 748
TfiI GAWTC 2 cut(s) 1136, 1344
Tru1I TTAA 7 cut(s) 302, 404, 720, 768, 891, 1152, 1516
Tru9I TTAA 7 cut(s) 302, 404, 720, 768, 891, 1152, 1516
TscAI CASTG 3 cut(s) 501, 868, 1409
TseFI GTSAC 2 cut(s) 492, 1049
TseI GCWGC 3 cut(s) 248, 1175, 1499
Tsp45I GTSAC 2 cut(s) 492, 1049
TspDTI ATGAA 8 cut(s) 194, 225, 278, 608, 1004, 1251, 1283, 1454
TspMI CCCGGG 1 cut(s) 1339
TspRI CASTG 3 cut(s) 501, 868, 1409
VneI GTGCAC 1 cut(s) 1391
VpaK11BI GGWCC 1 cut(s) 1189
XapI RAATTY 3 cut(s) 617, 725, 1270
XbaI TCTAGA 1 cut(s) 946
XcmI CCANNNNNNNNNTGG 1 cut(s) 669
XmaI CCCGGG 1 cut(s) 1339
XspI CTAG 5 cut(s) 122, 173, 947, 1193, 1416
ZrmI AGTACT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.