RLG00000035118
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
61165370 .. 61166263
894 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035118

Sequence Viewer

Length: 753 bp
ATGGAAATCCAGAGAATTAGCTCAAAGGACTATGTATCTGCTTGGAATTTGGGTGGTCTAGTTGTCACTCAAATGGCTTTAAAAGCTGCAATCGAGCTCAATGTCTTCAATATCATTGCCAATTCAGGACCCGGAGCTCATCTCACATCGAAAGAAATTGTATCTCAAATCTCAAATATAAATCCTAATGCAGCAGCTGCAAATTTGAAGCGAATACTAAGAGTTCTCAGTGTTCATTCTCTGCTATCTGTATCTCAAAGGTCAAGCTCAAGTGGTAAGACAATGCTAGAAGAGGCCTATGGTTTAACAAAGGAGACTCTTTGCCTAGTTCCAAATGAAGATGGAGTTTCCTTAGCTCCATATATTATGTTAGTTTCAGAAATGCACTCTGTGAAATGCTACTCCATGCTCAAAGACACAGTGCTTGAGCCTGGGAGCTTACCTTTTAAGAAGGCTCATGGTATGTCCTCATATGAGCACATGTCCGATAAACCTGAGCTCACAAATTTGTTTAATGAGGCTATTGGCCAAAGTACCATCATCAATTTTGAAGATGTGTTAAAGGTTTACAAAGGTTTTGAAGAGGTAAAAGAGTTGATGGATGTTGGAGGAGGCAATGGAACTACAATTGCCAAAGTAGTATCTAGCTATCCACACATTCATGGGATTAACTTTGATTTGCCTAATGTCATTGCTCAAGCAACTGCTAAATATCAAGCAGGTTCAATTTTTACCAAGGAATCTCTTAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

251

Amino Acids

27.11

Weight (kDa)

6.17

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 21 - 104 8.7e-12 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 134 - 240 1.6e-25 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 710
AcoI YGGCCR 1 cut(s) 526
AcsI RAATTY 3 cut(s) 46, 202, 505
AdeI CACNNNGTG 1 cut(s) 391
AfaI GTAC 1 cut(s) 535
AflIII ACRYGT 1 cut(s) 480
AgsI TTSAA 5 cut(s) 109, 208, 551, 581, 726
AjnI CCWGG 1 cut(s) 430
Alw21I GWGCWC 4 cut(s) 99, 139, 480, 501
Alw26I GTCTC 1 cut(s) 308
AlwNI CAGNNNCTG 1 cut(s) 197
AoxI GGCC 2 cut(s) 294, 526
ApeKI GCWGC 4 cut(s) 86, 191, 194, 197
ApoI RAATTY 3 cut(s) 46, 202, 505
AspS9I GGNCC 1 cut(s) 128
AsuC2I CCSGG 1 cut(s) 132
AvaII GGWCC 1 cut(s) 128
BalI TGGCCA 1 cut(s) 528
BanII GRGCYC 3 cut(s) 99, 139, 501
BbsI GAAGAC 1 cut(s) 97
Bbv12I GWGCWC 4 cut(s) 99, 139, 480, 501
BbvI GCAGC 4 cut(s) 73, 184, 203, 206
BccI CCATC 3 cut(s) 335, 545, 592
BciT130I CCWGG 1 cut(s) 432
BcnI CCSGG 1 cut(s) 132
BcoDI GTCTC 1 cut(s) 308
BfaI CTAG 4 cut(s) 59, 287, 326, 645
BfuAI ACCTGC 1 cut(s) 710
BisI GCNGC 4 cut(s) 87, 192, 195, 198
BlsI GCNGC 4 cut(s) 88, 193, 196, 199
Bme1390I CCNGG 2 cut(s) 132, 432
Bme18I GGWCC 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 128
BmiI GGNNCC 1 cut(s) 130
BmrFI CCNGG 2 cut(s) 132, 432
BpiI GAAGAC 1 cut(s) 97
BplI GAGNNNNNCTC 2 cut(s) 126, 158
Bpu10I CCTNAGC 2 cut(s) 352, 495
BpuEI CTTGAG 3 cut(s) 253, 446, 681
BpuMI CCSGG 1 cut(s) 132
BsaJI CCNNGG 2 cut(s) 431, 735
Bse3DI GCAATG 3 cut(s) 114, 622, 690
BseBI CCWGG 1 cut(s) 432
BseDI CCNNGG 2 cut(s) 431, 735
BseGI GGATG 1 cut(s) 607
BseMI GCAATG 3 cut(s) 114, 622, 690
BseMII CTCAG 2 cut(s) 241, 486
BseRI GAGGAG 1 cut(s) 624
BseXI GCAGC 4 cut(s) 73, 184, 203, 206
BshFI GGCC 2 cut(s) 296, 528
BsiHKAI GWGCWC 4 cut(s) 99, 139, 480, 501
BsiSI CCGG 1 cut(s) 132
BsmAI GTCTC 1 cut(s) 308
BsnI GGCC 2 cut(s) 296, 528
Bsp1286I GDGCHC 4 cut(s) 99, 139, 480, 501
BspANI GGCC 2 cut(s) 296, 528
BspCNI CTCAG 2 cut(s) 240, 487
BspLI GGNNCC 1 cut(s) 130
BspMI ACCTGC 1 cut(s) 710
BsrDI GCAATG 3 cut(s) 114, 622, 690
BssECI CCNNGG 2 cut(s) 431, 735
BssT1I CCWWGG 1 cut(s) 735
Bst2UI CCWGG 1 cut(s) 432
Bst4CI ACNGT 1 cut(s) 421
Bst6I CTCTTC 2 cut(s) 285, 576
BstAPI GCANNNNNTGC 1 cut(s) 197
BstDEI CTNAG 4 cut(s) 218, 227, 352, 495
BstF5I GGATG 1 cut(s) 607
BstMAI GTCTC 1 cut(s) 308
BstMWI GCNNNNNNNGC 2 cut(s) 83, 197
BstNI CCWGG 1 cut(s) 432
BstNSI RCATGY 1 cut(s) 484
BstSCI CCNGG 2 cut(s) 130, 430
BstV1I GCAGC 4 cut(s) 73, 184, 203, 206
BstV2I GAAGAC 1 cut(s) 97
BsuRI GGCC 2 cut(s) 296, 528
BtsCI GGATG 1 cut(s) 607
BtsIMutI CAGTG 2 cut(s) 235, 426
BveI ACCTGC 1 cut(s) 710
CaiI CAGNNNCTG 1 cut(s) 197
Cfr13I GGNCC 1 cut(s) 128
Csp6I GTAC 1 cut(s) 534
CviAII CATG 4 cut(s) 406, 458, 481, 662
CviQI GTAC 1 cut(s) 534
DdeI CTNAG 4 cut(s) 218, 227, 352, 495
DraI TTTAAA 1 cut(s) 81
DraIII CACNNNGTG 1 cut(s) 391
EaeI YGGCCR 1 cut(s) 526
Eam1104I CTCTTC 2 cut(s) 285, 576
EarI CTCTTC 2 cut(s) 285, 576
Ecl136II GAGCTC 3 cut(s) 97, 137, 499
Eco130I CCWWGG 1 cut(s) 735
Eco147I AGGCCT 1 cut(s) 296
Eco24I GRGCYC 3 cut(s) 99, 139, 501
Eco47I GGWCC 1 cut(s) 128
Eco53kI GAGCTC 3 cut(s) 97, 137, 499
EcoICRI GAGCTC 3 cut(s) 97, 137, 499
EcoO109I RGGNCCY 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 430
EcoT14I CCWWGG 1 cut(s) 735
EcoT38I GRGCYC 3 cut(s) 99, 139, 501
ErhI CCWWGG 1 cut(s) 735
FaeI CATG 4 cut(s) 409, 461, 484, 665
FatI CATG 4 cut(s) 405, 457, 480, 661
FauNDI CATATG 1 cut(s) 472
Fnu4HI GCNGC 4 cut(s) 87, 192, 195, 198
FokI GGATG 1 cut(s) 614
FriOI GRGCYC 3 cut(s) 99, 139, 501
Fsp4HI GCNGC 4 cut(s) 87, 192, 195, 198
FspBI CTAG 4 cut(s) 59, 287, 326, 645
GluI GCNGC 4 cut(s) 87, 192, 195, 198
HaeIII GGCC 2 cut(s) 296, 528
HapII CCGG 1 cut(s) 132
Hin1II CATG 4 cut(s) 409, 461, 484, 665
HinfI GANTC 2 cut(s) 316, 740
HpaII CCGG 1 cut(s) 132
Hpy166II GTNNAC 1 cut(s) 568
Hpy188I TCNGA 2 cut(s) 379, 487
Hpy188III TCNNGA 2 cut(s) 10, 126
Hpy8I GTNNAC 1 cut(s) 568
HpyAV CCTTC 1 cut(s) 445
HpyCH4III ACNGT 1 cut(s) 421
HpyCH4V TGCA 4 cut(s) 89, 191, 200, 385
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 197
HpyF3I CTNAG 4 cut(s) 218, 227, 352, 495
Hsp92II CATG 4 cut(s) 409, 461, 484, 665
LmnI GCTCC 3 cut(s) 134, 361, 435
LpnPI CCDG 7 cut(s) 23, 111, 145, 417, 444, 507, 705
Lsp1109I GCAGC 4 cut(s) 73, 184, 203, 206
MaeI CTAG 4 cut(s) 59, 287, 326, 645
MaeIII GTNAC 1 cut(s) 64
MboII GAAGA 5 cut(s) 97, 302, 350, 563, 593
MfeI CAATTG 1 cut(s) 627
MhlI GDGCHC 4 cut(s) 99, 139, 480, 501
MlsI TGGCCA 1 cut(s) 528
MluNI TGGCCA 1 cut(s) 528
MlyI GAGTC 1 cut(s) 310
MmeI TCCRAC 1 cut(s) 586
MnlI CCTC 6 cut(s) 286, 478, 511, 577, 602, 605
Mox20I TGGCCA 1 cut(s) 528
MscI TGGCCA 1 cut(s) 528
MseI TTAA 7 cut(s) 80, 305, 447, 513, 560, 669, 747
MslI CAYNNNNRTG 2 cut(s) 71, 660
Msp20I TGGCCA 1 cut(s) 528
MspA1I CMGCKG 1 cut(s) 197
MspI CCGG 1 cut(s) 132
MspR9I CCNGG 2 cut(s) 132, 432
MunI CAATTG 1 cut(s) 627
MvaI CCWGG 1 cut(s) 432
MwoI GCNNNNNNNGC 2 cut(s) 83, 197
NciI CCSGG 1 cut(s) 132
NdeI CATATG 1 cut(s) 472
NlaIII CATG 4 cut(s) 409, 461, 484, 665
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 64
NspI RCATGY 1 cut(s) 484
PceI AGGCCT 1 cut(s) 296
PciI ACATGT 1 cut(s) 480
PfeI GAWTC 1 cut(s) 740
PkrI GCNGC 4 cut(s) 88, 193, 196, 199
PleI GAGTC 1 cut(s) 310
PpsI GAGTC 1 cut(s) 310
PpuMI RGGWCCY 1 cut(s) 128
PscI ACATGT 1 cut(s) 480
Psp124BI GAGCTC 3 cut(s) 99, 139, 501
Psp5II RGGWCCY 1 cut(s) 128
Psp6I CCWGG 1 cut(s) 430
PspGI CCWGG 1 cut(s) 430
PspN4I GGNNCC 1 cut(s) 130
PspPI GGNCC 1 cut(s) 128
PspPPI RGGWCCY 1 cut(s) 128
PstNI CAGNNNCTG 1 cut(s) 197
PvuII CAGCTG 1 cut(s) 197
RsaI GTAC 1 cut(s) 535
RsaNI GTAC 1 cut(s) 534
RseI CAYNNNNRTG 2 cut(s) 71, 660
SacI GAGCTC 3 cut(s) 99, 139, 501
SaqAI TTAA 7 cut(s) 80, 305, 447, 513, 560, 669, 747
SatI GCNGC 4 cut(s) 87, 192, 195, 198
Sau96I GGNCC 1 cut(s) 128
SchI GAGTC 1 cut(s) 310
ScrFI CCNGG 2 cut(s) 132, 432
SduI GDGCHC 4 cut(s) 99, 139, 480, 501
SinI GGWCC 1 cut(s) 128
SmiMI CAYNNNNRTG 2 cut(s) 71, 660
SmlI CTYRAG 3 cut(s) 268, 425, 696
SmoI CTYRAG 3 cut(s) 268, 425, 696
SseBI AGGCCT 1 cut(s) 296
SspMI CTAG 4 cut(s) 59, 287, 326, 645
SstI GAGCTC 3 cut(s) 99, 139, 501
StuI AGGCCT 1 cut(s) 296
StyD4I CCNGG 2 cut(s) 130, 430
StyI CCWWGG 1 cut(s) 735
TaaI ACNGT 1 cut(s) 421
TaqI TCGA 2 cut(s) 93, 149
TfiI GAWTC 1 cut(s) 740
Tru1I TTAA 7 cut(s) 80, 305, 447, 513, 560, 669, 747
Tru9I TTAA 7 cut(s) 80, 305, 447, 513, 560, 669, 747
TscAI CASTG 2 cut(s) 235, 426
TseFI GTSAC 1 cut(s) 64
TseI GCWGC 4 cut(s) 86, 191, 194, 197
Tsp45I GTSAC 1 cut(s) 64
TspDTI ATGAA 3 cut(s) 224, 351, 650
TspRI CASTG 2 cut(s) 235, 426
VpaK11BI GGWCC 1 cut(s) 128
XapI RAATTY 3 cut(s) 46, 202, 505
XceI RCATGY 1 cut(s) 484
XspI CTAG 4 cut(s) 59, 287, 326, 645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.