Rorug07G0126200
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000656
Physical Location & Seq
Forward (+)
9956329 .. 9958799
2471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0126200.1

Sequence Viewer

Length: 1791 bp
ATGGCGGAAACCACCAAACTGAACTTGGCTGATTCTGCTGCTGCCGATGCCCTGGAGAAGCCGCCGGAGGACTTGCGAAAAGTCCTCGCCAAGATGCGTACCCAGGAAGCTCTGATCAGCAGCACAACCAAGATGGTGGAGGGTTTGTTAAGAGACGGCTTCATGAACGTGGCCTTGGAGATTGGAGCCAAGATTCAGGACACCAATGAGGTGCCTCGGGTCGTCACCGACACTGCTGTCATCGAGTACTACGTCAATGCCGCAGGGGACAGGACCAAGGATGCTCTCAGAGTGTTCAAGCACATGTCGGCTTCAGGGGTTGAACCAAATGCCTACACATATGCCATCATCATCAAGGCTCTTGCTGCTGCTGACCTTAAGAAGAACCCGAATTTCGTTGTTTATGCCAAGAATTACTTTGTGGAGATGCTGGACAGGGGAATGCAGCCAAATGAGGAGACTTATGGTGCAGTGTTAGAAGGCATTGGCCGCGGTGAGAACAAGGCCGAGGCTGAGGAAGAGCGCAGGGAGTTTGTGGAGAATGTGAAAGAAAAGGGGTTTGTGCTGGTGCTCCAGAAGGAGACAGAGGAGATGGCTAAACCTCCTCCATTGAAGTCCGAGATGGAAATGCTTAAGGAACATGTAATGATGGTGTTCGAGGATGCCACCAAAGATTGTGAAGACGAGAATGTGCAAGCAAGATTCAGACAGATTGGGCAGGACTATGAATCACTGAGCAAATGCGCATTCGACCTTTTTAATGCTTTGGTACGTAGAGGGCTCAACGAGGAAGCCAGAGAGCTATTTAAGCCCCTGTTGGAGACAGCCATACTGCCCGATGAGGCCATCTTCACCATTGTCATCCATATCTATGGCGCTGGCAAGATCATGAGTCATGCTCTGAAGGCGTACCGGCACATGTTATCTTACGGGATCACCCCCAGCTCTTGCACTTACAATTTACTCATCGCAACACTTTCTCTTGATCCCAATTTCCTTGGGCATGCCAAGGAGTTATTTCTCGAAATGTTGGATAAGGGTATCAAGCCCTTTTGCGGAACCTTTATGGCTGTGTTCAATGGTATTGCTCGCGTGGAGTCCTTGGAGAAGGGGAAGGAGTTGCTTGAGCAGATAAAGCCTAAGGGGGTTTTGCCTGGGCTAGACGAAGGCCGTTTCACTGAGGCAATGAAGGCTATGAAGTTGTATGATGATCTCGAGAAGAAGACCACTGACAAAGATGTTCAAGAAGTTATCCGCAATATCTACCTTAATGGCATGGAGGAAGAGTCAAGGGACATGTTCATTGCTATGGTAGAAGATGGCAATGTAGACGAGGCAATGAGGACCTTTCAGTCAACAGGTCAGCCGCGCATCAATCCCATGATCATAGTCCACACTGCTGTTATTGAAGCTTACATCAATGGTGGCAAGACTGAGGGTGCTCTCCAGACCTTCATGGACATGCTAGCAGCTGGACTTGCCCCAATATCCTACACTTACTCTGTTTTGATCAAGGGACTAGCTGCTGACCCCAACTTCTTTGGGGATGCCAAGAAGTATCTGATTGAGATGATGGACAAGGGTATGCATCCAAATGCTGCTACCTACACCGCAGTGTTTGAGGGCTTTGCAAGGGAGGATGACAAGGCAACTGAGGAGGAGGGTAAGAAATTTCTGGAGGTCATGATGGCCAAGGGTTTTGTACCTGACTCTGTGGTTGTGAGGAAGGTGTTAACAGGCAGACCAACATCTGTGATTAGCAGGGTCATGAACATCATCCTTTTCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00950 ko01100 ko01110 map00940 map00950 map01100 map01110
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

596

Amino Acids

66.61

Weight (kDa)

5.07

Isoelectric Point (pI)

32.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 72 - 122 4.6e-10 PPR repeat family
PPR_2 PF13041 279 - 325 3.8e-06 PPR repeat family
PPR_2 PF13041 463 - 508 2.3e-08 PPR repeat family
TPR_24 PF23276 465 - 548 9.8e-06 Fungal tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000656)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g09630 FvH4_3g13140 FvH4_3g13141 FvH4_3g13160 FvH4_3g13170 FvH4_6g14540
malus_domestica MD10G1257600.v1.1
prunus_persica Prupe.4G086200_v2.0.a1
pyrus_communis pycom05g25920 pycom10g21380
rosa_chinensis RchiOBHm_Chr5g0014991 RchiOBHm_Chr5g0046111 RchiOBHm_Chr5g0056661 RchiOBHm_Chr7g0209941 RchiOBHm_Chr7g0211601 RchiOBHm_Chr7g0228691
rosa_laevigata RLG00000002994 RLG00000003075 RLG00000032124 RLG00000032125 RLG00000032158 RLG00000034388 RLG00000034564 RLG00000035118
rosa_multiflora Rmu_sc0003162.1_g000007 Rmu_sc0003162.1_g000010 Rmu_sc0003760.1_g000034 Rmu_sc0004232.1_g000016 Rmu_sc0004232.1_g000017 Rmu_sc0004232.1_g000023 Rmu_sc0004889.1_g000017 Rmu_sc0008669.1_g000001 Rmu_sc0009240.1_g000017 Rmu_sc0009255.1_g000012 Rmu_sc0013112.1_g000007
rosa_roxburghii Rroxscaffold_1G00023690 Rroxscaffold_1G00035370 Rroxscaffold_1G00035380 Rroxscaffold_1G00061590 Rroxscaffold_1G00061940 Rroxscaffold_3G00230880 Rroxscaffold_3G00247690
rosa_rugosa Rorug05G0019200 Rorug05G0022400 Rorug05G0225700 Rorug05G0246400 Rorug05G0301100 Rorug07G0117600 Rorug07G0126200
rosa_samantha Rh5AG114200 Rh5AG114300 Rh5AG117800 Rh5BG111300 Rh5BG115000 Rh5BG314800 Rh5BG383300 Rh5CG126300 Rh5CG359500 Rh5CG406400 Rh5DG110100 Rh5DG110600 Rh5DG114500 Rh5DG396000 Rh5DG396100 Rh7AG251400 Rh7AG403800 Rh7BG246000 Rh7CG268200 Rh7DG258000 Rh7DG266400
rosa_wichuraiana Rw5G009920 Rw5G010150 Rw5G028650 Rw5G034830 Rw7G021330 Rw7G022120 Rw7G033560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 236, 1351
Acc16I TGCGCA 1 cut(s) 745
AccB1I GGYRCC 1 cut(s) 211
AccI GTMKAC 1 cut(s) 1329
AccII CGCG 3 cut(s) 492, 1092, 1369
AciI CCGC 9 cut(s) 5, 62, 261, 490, 492, 1056, 1255, 1367, 1611
AclWI GGATC 2 cut(s) 941, 980
AcoI YGGCCR 2 cut(s) 487, 1689
AcsI RAATTY 2 cut(s) 391, 1670
AcuI CTGAAG 2 cut(s) 297, 923
AfaI GTAC 5 cut(s) 100, 248, 771, 911, 1704
AfiI CCNNNNNNNGG 1 cut(s) 1055
AflII CTTAAG 2 cut(s) 377, 632
AflIII ACRYGT 4 cut(s) 303, 640, 918, 1296
AgsI TTSAA 6 cut(s) 298, 323, 613, 1078, 1244, 1409
AjnI CCWGG 3 cut(s) 51, 102, 1153
AjuI GAANNNNNNNTTGG 2 cut(s) 158, 190
AleI CACNNNNGTG 1 cut(s) 1613
AluBI AGCT 6 cut(s) 110, 802, 945, 1412, 1472, 1523
AluI AGCT 6 cut(s) 110, 802, 945, 1412, 1472, 1523
Alw21I GWGCWC 2 cut(s) 573, 1444
Alw26I GTCTC 4 cut(s) 147, 452, 575, 815
AlwI GGATC 2 cut(s) 941, 980
Ama87I CYCGRG 2 cut(s) 216, 1214
AoxI GGCC 6 cut(s) 171, 487, 504, 843, 1168, 1689
ApeKI GCWGC 9 cut(s) 38, 41, 120, 365, 368, 445, 1469, 1523, 1598
ApoI RAATTY 2 cut(s) 391, 1670
AspLEI GCGC 4 cut(s) 525, 746, 878, 1371
AspS9I GGNCC 2 cut(s) 273, 1344
AsuHPI GGTGA 4 cut(s) 217, 506, 844, 928
AsuNHI GCTAGC 1 cut(s) 1465
AvaI CYCGRG 2 cut(s) 216, 1214
AvaII GGWCC 2 cut(s) 273, 1344
AxyI CCTNAGG 1 cut(s) 1140
BalI TGGCCA 1 cut(s) 1691
BanI GGYRCC 1 cut(s) 211
BanII GRGCYC 1 cut(s) 783
BbsI GAAGAC 2 cut(s) 687, 1229
Bbv12I GWGCWC 2 cut(s) 573, 1444
BbvCI CCTCAGC 1 cut(s) 513
BbvI GCAGC 9 cut(s) 25, 28, 132, 352, 355, 457, 1481, 1510, 1585
BccI CCATC 9 cut(s) 127, 353, 586, 616, 643, 854, 1313, 1567, 1681
BceAI ACGGC 2 cut(s) 172, 1155
BciT130I CCWGG 3 cut(s) 53, 104, 1155
BclI TGATCA 3 cut(s) 114, 1383, 1509
BcoDI GTCTC 4 cut(s) 147, 452, 575, 815
BfaI CTAG 3 cut(s) 1160, 1466, 1520
BfoI RGCGCY 1 cut(s) 879
BfrI CTTAAG 2 cut(s) 377, 632
BmcAI AGTACT 1 cut(s) 248
Bme1390I CCNGG 3 cut(s) 53, 104, 1155
Bme18I GGWCC 2 cut(s) 273, 1344
BmeT110I CYCGRG 2 cut(s) 216, 1214
BmgT120I GGNCC 2 cut(s) 273, 1344
BmiI GGNNCC 3 cut(s) 187, 213, 1060
BmrFI CCNGG 3 cut(s) 53, 104, 1155
BmsI GCATC 8 cut(s) 37, 84, 271, 417, 652, 1380, 1537, 1597
BmtI GCTAGC 1 cut(s) 1469
BpiI GAAGAC 2 cut(s) 687, 1229
BplI GAGNNNNNCTC 2 cut(s) 883, 915
BpmI CTGGAG 4 cut(s) 74, 557, 1430, 1697
Bpu10I CCTNAGC 1 cut(s) 513
BpuEI CTTGAG 1 cut(s) 1145
BsaAI YACGTR 1 cut(s) 773
BsaXI ACNNNNNCTCC 4 cut(s) 131, 161, 1271, 1301
Bsc4I CCNNNNNNNGG 1 cut(s) 1055
Bse118I RCCGGY 1 cut(s) 912
Bse21I CCTNAGG 1 cut(s) 1140
Bse3DI GCAATG 4 cut(s) 1191, 1302, 1330, 1344
BseBI CCWGG 3 cut(s) 53, 104, 1155
BseGI GGATG 7 cut(s) 286, 667, 861, 1552, 1588, 1645, 1776
BseLI CCNNNNNNNGG 1 cut(s) 1055
BseMI GCAATG 4 cut(s) 1191, 1302, 1330, 1344
BseMII CTCAG 6 cut(s) 301, 504, 725, 1170, 1425, 1644
BseRI GAGGAG 5 cut(s) 470, 594, 602, 1670, 1673
BseXI GCAGC 9 cut(s) 25, 28, 132, 352, 355, 457, 1481, 1510, 1585
BseYI CCCAGC 1 cut(s) 941
BsgI GTGCAG 1 cut(s) 489
Bsh1236I CGCG 3 cut(s) 492, 1092, 1369
BshFI GGCC 6 cut(s) 173, 489, 506, 845, 1170, 1691
BshNI GGYRCC 1 cut(s) 211
BsiHKAI GWGCWC 2 cut(s) 573, 1444
BsiHKCI CYCGRG 2 cut(s) 216, 1214
BsiSI CCGG 2 cut(s) 65, 913
BslFI GGGAC 3 cut(s) 281, 1307, 1530
BslI CCNNNNNNNGG 1 cut(s) 1055
BsmAI GTCTC 4 cut(s) 147, 452, 575, 815
BsmBI CGTCTC 1 cut(s) 147
BsmFI GGGAC 3 cut(s) 281, 1307, 1530
BsmI GAATGC 2 cut(s) 447, 746
BsnI GGCC 6 cut(s) 173, 489, 506, 845, 1170, 1691
BsoBI CYCGRG 2 cut(s) 216, 1214
Bsp1286I GDGCHC 3 cut(s) 573, 783, 1444
Bsp143I GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
BspACI CCGC 9 cut(s) 5, 62, 261, 490, 492, 1056, 1255, 1367, 1611
BspANI GGCC 6 cut(s) 173, 489, 506, 845, 1170, 1691
BspCNI CTCAG 6 cut(s) 300, 505, 726, 1171, 1426, 1645
BspFNI CGCG 3 cut(s) 492, 1092, 1369
BspHI TCATGA 4 cut(s) 162, 888, 1683, 1767
BspLI GGNNCC 3 cut(s) 187, 213, 1060
BspOI GCTAGC 1 cut(s) 1469
BspPI GGATC 2 cut(s) 941, 980
BspQI GCTCTTC 1 cut(s) 513
BspT107I GGYRCC 1 cut(s) 211
BspTI CTTAAG 2 cut(s) 377, 632
BsrDI GCAATG 4 cut(s) 1191, 1302, 1330, 1344
BsrFI RCCGGY 1 cut(s) 912
BssAI RCCGGY 1 cut(s) 912
BssMI GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
BssT1I CCWWGG 6 cut(s) 174, 276, 997, 1008, 1101, 1692
Bst2UI CCWGG 3 cut(s) 53, 104, 1155
Bst6I CTCTTC 2 cut(s) 513, 1278
BstAFI CTTAAG 2 cut(s) 377, 632
BstBAI YACGTR 1 cut(s) 773
BstC8I GCNNGC 5 cut(s) 696, 880, 1005, 1090, 1467
BstDEI CTNAG 7 cut(s) 287, 513, 734, 1140, 1179, 1434, 1653
BstDSI CCRYGG 1 cut(s) 490
BstF5I GGATG 7 cut(s) 286, 667, 861, 1552, 1588, 1645, 1776
BstFNI CGCG 3 cut(s) 492, 1092, 1369
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 4 cut(s) 525, 746, 878, 1371
BstKTI GATC 7 cut(s) 117, 888, 936, 988, 1213, 1386, 1512
BstMAI GTCTC 4 cut(s) 147, 452, 575, 815
BstMBI GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
BstMWI GCNNNNNNNGC 9 cut(s) 35, 47, 365, 489, 808, 905, 1135, 1190, 1478
BstNI CCWGG 3 cut(s) 53, 104, 1155
BstNSI RCATGY 6 cut(s) 307, 644, 922, 1007, 1300, 1465
BstSCI CCNGG 3 cut(s) 51, 102, 1153
BstSNI TACGTA 1 cut(s) 773
BstUI CGCG 3 cut(s) 492, 1092, 1369
BstV1I GCAGC 9 cut(s) 25, 28, 132, 352, 355, 457, 1481, 1510, 1585
BstV2I GAAGAC 2 cut(s) 687, 1229
BstXI CCANNNNNNTGG 2 cut(s) 136, 872
Bsu36I CCTNAGG 1 cut(s) 1140
BsuRI GGCC 6 cut(s) 173, 489, 506, 845, 1170, 1691
BtgI CCRYGG 1 cut(s) 490
BtgZI GCGATG 1 cut(s) 952
BtsCI GGATG 7 cut(s) 286, 667, 861, 1552, 1588, 1645, 1776
BtsI GCAGTG 4 cut(s) 231, 477, 1395, 1620
BtsIMutI CAGTG 7 cut(s) 231, 477, 731, 1176, 1227, 1395, 1620
Cac8I GCNNGC 5 cut(s) 696, 880, 1005, 1090, 1467
CciI TCATGA 4 cut(s) 162, 888, 1683, 1767
CfoI GCGC 4 cut(s) 525, 746, 878, 1371
Cfr10I RCCGGY 1 cut(s) 912
Cfr13I GGNCC 2 cut(s) 273, 1344
Cfr42I CCGCGG 1 cut(s) 493
Csp6I GTAC 5 cut(s) 99, 247, 770, 910, 1703
CviQI GTAC 5 cut(s) 99, 247, 770, 910, 1703
DdeI CTNAG 7 cut(s) 287, 513, 734, 1140, 1179, 1434, 1653
DpnI GATC 7 cut(s) 116, 887, 935, 987, 1212, 1385, 1511
DpnII GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
DrdI GACNNNNNNGTC 2 cut(s) 236, 1351
DseDI GACNNNNNNGTC 2 cut(s) 236, 1351
EaeI YGGCCR 2 cut(s) 487, 1689
Eam1104I CTCTTC 2 cut(s) 513, 1278
EarI CTCTTC 2 cut(s) 513, 1278
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 773
Eco130I CCWWGG 6 cut(s) 174, 276, 997, 1008, 1101, 1692
Eco24I GRGCYC 1 cut(s) 783
Eco47I GGWCC 2 cut(s) 273, 1344
Eco57I CTGAAG 2 cut(s) 297, 923
Eco81I CCTNAGG 1 cut(s) 1140
Eco88I CYCGRG 2 cut(s) 216, 1214
EcoO109I RGGNCCY 1 cut(s) 1344
EcoRII CCWGG 3 cut(s) 51, 102, 1153
EcoT14I CCWWGG 6 cut(s) 174, 276, 997, 1008, 1101, 1692
EcoT22I ATGCAT 1 cut(s) 1590
EcoT38I GRGCYC 1 cut(s) 783
ErhI CCWWGG 6 cut(s) 174, 276, 997, 1008, 1101, 1692
Esp3I CGTCTC 1 cut(s) 147
FalI AAGNNNNNCTT 2 cut(s) 401, 433
FaqI GGGAC 3 cut(s) 281, 1307, 1530
FauNDI CATATG 1 cut(s) 340
FbaI TGATCA 3 cut(s) 114, 1383, 1509
FblI GTMKAC 1 cut(s) 1329
FokI GGATG 7 cut(s) 293, 674, 848, 1559, 1575, 1652, 1763
FriOI GRGCYC 1 cut(s) 783
FspAI RTGCGCAY 1 cut(s) 745
FspBI CTAG 3 cut(s) 1160, 1466, 1520
FspI TGCGCA 1 cut(s) 745
GlaI GCGC 4 cut(s) 524, 745, 877, 1370
GsaI CCCAGC 1 cut(s) 945
GsuI CTGGAG 4 cut(s) 74, 557, 1430, 1697
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 6 cut(s) 173, 489, 506, 845, 1170, 1691
HapII CCGG 2 cut(s) 65, 913
HhaI GCGC 4 cut(s) 525, 746, 878, 1371
Hin6I GCGC 4 cut(s) 523, 744, 876, 1369
HinP1I GCGC 4 cut(s) 523, 744, 876, 1369
HincII GTYRAC 2 cut(s) 1356, 1734
HindII GTYRAC 2 cut(s) 1356, 1734
HindIII AAGCTT 1 cut(s) 1410
HinfI GANTC 8 cut(s) 32, 193, 702, 728, 892, 1097, 1286, 1709
HpaI GTTAAC 1 cut(s) 1734
HpaII CCGG 2 cut(s) 65, 913
HphI GGTGA 4 cut(s) 217, 506, 844, 928
Hpy166II GTNNAC 4 cut(s) 1330, 1356, 1393, 1734
Hpy188I TCNGA 6 cut(s) 114, 290, 619, 707, 903, 1563
Hpy8I GTNNAC 4 cut(s) 1330, 1356, 1393, 1734
HpyAV CCTTC 9 cut(s) 473, 571, 898, 1102, 1108, 1160, 1183, 1462, 1720
HpyCH4IV ACGT 3 cut(s) 168, 252, 772
HpyCH4V TGCA 6 cut(s) 445, 470, 694, 951, 1588, 1631
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 47, 365, 489, 808, 905, 1135, 1190, 1478
HpyF3I CTNAG 7 cut(s) 287, 513, 734, 1140, 1179, 1434, 1653
HpySE526I ACGT 3 cut(s) 168, 252, 772
HspAI GCGC 4 cut(s) 523, 744, 876, 1369
Ksp22I TGATCA 3 cut(s) 114, 1383, 1509
KspAI GTTAAC 1 cut(s) 1734
KspI CCGCGG 1 cut(s) 493
Kzo9I GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
LguI GCTCTTC 1 cut(s) 513
LmnI GCTCC 2 cut(s) 185, 576
Lsp1109I GCAGC 9 cut(s) 25, 28, 132, 352, 355, 457, 1481, 1510, 1585
LweI GCATC 8 cut(s) 37, 84, 271, 417, 652, 1380, 1537, 1597
MaeI CTAG 3 cut(s) 1160, 1466, 1520
MaeII ACGT 3 cut(s) 168, 252, 772
MaeIII GTNAC 1 cut(s) 223
MalI GATC 7 cut(s) 116, 887, 935, 987, 1212, 1385, 1511
MboI GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
MboII GAAGA 8 cut(s) 394, 530, 692, 841, 1231, 1234, 1295, 1328
MhlI GDGCHC 3 cut(s) 573, 783, 1444
MlsI TGGCCA 1 cut(s) 1691
MluCI AATT 5 cut(s) 391, 412, 958, 991, 1670
MluNI TGGCCA 1 cut(s) 1691
MlyI GAGTC 4 cut(s) 901, 1106, 1295, 1703
MmeI TCCRAC 2 cut(s) 798, 1011
Mox20I TGGCCA 1 cut(s) 1691
Mph1103I ATGCAT 1 cut(s) 1590
MscI TGGCCA 1 cut(s) 1691
MseI TTAA 7 cut(s) 149, 378, 633, 759, 807, 1269, 1733
MslI CAYNNNNRTG 6 cut(s) 167, 870, 1307, 1460, 1593, 1613
Msp20I TGGCCA 1 cut(s) 1691
MspA1I CMGCKG 2 cut(s) 492, 1472
MspCI CTTAAG 2 cut(s) 377, 632
MspI CCGG 2 cut(s) 65, 913
MspR9I CCNGG 3 cut(s) 53, 104, 1155
Mva1269I GAATGC 2 cut(s) 447, 746
MvaI CCWGG 3 cut(s) 53, 104, 1155
MvnI CGCG 3 cut(s) 492, 1092, 1369
MwoI GCNNNNNNNGC 9 cut(s) 35, 47, 365, 489, 808, 905, 1135, 1190, 1478
NdeI CATATG 1 cut(s) 340
NdeII GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
NheI GCTAGC 1 cut(s) 1465
NlaIV GGNNCC 3 cut(s) 187, 213, 1060
NmeAIII GCCGAG 1 cut(s) 532
NmuCI GTSAC 1 cut(s) 223
NsbI TGCGCA 1 cut(s) 745
NsiI ATGCAT 1 cut(s) 1590
NspI RCATGY 6 cut(s) 307, 644, 922, 1007, 1300, 1465
OliI CACNNNNGTG 1 cut(s) 1613
PaeI GCATGC 1 cut(s) 1007
PaeR7I CTCGAG 1 cut(s) 1214
PagI TCATGA 4 cut(s) 162, 888, 1683, 1767
PciI ACATGT 4 cut(s) 303, 640, 918, 1296
PciSI GCTCTTC 1 cut(s) 513
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 2 cut(s) 447, 746
PfeI GAWTC 4 cut(s) 32, 193, 702, 728
PleI GAGTC 4 cut(s) 900, 1105, 1294, 1703
PpsI GAGTC 4 cut(s) 900, 1105, 1294, 1703
Ppu21I YACGTR 1 cut(s) 773
PpuMI RGGWCCY 1 cut(s) 1344
PscI ACATGT 4 cut(s) 303, 640, 918, 1296
Psp5II RGGWCCY 1 cut(s) 1344
Psp6I CCWGG 3 cut(s) 51, 102, 1153
PspFI CCCAGC 1 cut(s) 941
PspGI CCWGG 3 cut(s) 51, 102, 1153
PspN4I GGNNCC 3 cut(s) 187, 213, 1060
PspPI GGNCC 2 cut(s) 273, 1344
PspPPI RGGWCCY 1 cut(s) 1344
PvuII CAGCTG 1 cut(s) 1472
RsaI GTAC 5 cut(s) 100, 248, 771, 911, 1704
RsaNI GTAC 5 cut(s) 99, 247, 770, 910, 1703
RseI CAYNNNNRTG 6 cut(s) 167, 870, 1307, 1460, 1593, 1613
SacII CCGCGG 1 cut(s) 493
SapI GCTCTTC 1 cut(s) 513
SaqAI TTAA 7 cut(s) 149, 378, 633, 759, 807, 1269, 1733
Sau3AI GATC 7 cut(s) 114, 885, 933, 985, 1210, 1383, 1509
Sau96I GGNCC 2 cut(s) 273, 1344
ScaI AGTACT 1 cut(s) 248
SchI GAGTC 4 cut(s) 901, 1106, 1295, 1703
ScrFI CCNGG 3 cut(s) 53, 104, 1155
SduI GDGCHC 3 cut(s) 573, 783, 1444
SfaNI GCATC 8 cut(s) 37, 84, 271, 417, 652, 1380, 1537, 1597
Sfr274I CTCGAG 1 cut(s) 1214
Sfr303I CCGCGG 1 cut(s) 493
SgrBI CCGCGG 1 cut(s) 493
SinI GGWCC 2 cut(s) 273, 1344
SlaI CTCGAG 1 cut(s) 1214
SmiMI CAYNNNNRTG 6 cut(s) 167, 870, 1307, 1460, 1593, 1613
SmlI CTYRAG 4 cut(s) 377, 632, 1124, 1214
SmoI CTYRAG 4 cut(s) 377, 632, 1124, 1214
SnaBI TACGTA 1 cut(s) 773
SphI GCATGC 1 cut(s) 1007
Sse9I AATT 5 cut(s) 391, 412, 958, 991, 1670
SsiI CCGC 9 cut(s) 5, 62, 261, 490, 492, 1056, 1255, 1367, 1611
SspMI CTAG 3 cut(s) 1160, 1466, 1520
StyD4I CCNGG 3 cut(s) 51, 102, 1153
StyI CCWWGG 6 cut(s) 174, 276, 997, 1008, 1101, 1692
TaiI ACGT 3 cut(s) 171, 255, 775
TaqI TCGA 6 cut(s) 243, 657, 750, 1023, 1215, 1785
TasI AATT 5 cut(s) 391, 412, 958, 991, 1670
TatI WGTACW 1 cut(s) 246
TauI GCSGC 4 cut(s) 64, 263, 492, 1369
TfiI GAWTC 4 cut(s) 32, 193, 702, 728
Tru1I TTAA 7 cut(s) 149, 378, 633, 759, 807, 1269, 1733
Tru9I TTAA 7 cut(s) 149, 378, 633, 759, 807, 1269, 1733
TscAI CASTG 7 cut(s) 238, 477, 738, 1183, 1234, 1402, 1620
TseFI GTSAC 1 cut(s) 223
TseI GCWGC 9 cut(s) 38, 41, 120, 365, 368, 445, 1469, 1523, 1598
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 8 cut(s) 151, 179, 741, 1202, 1211, 1291, 1444, 1784
TspRI CASTG 7 cut(s) 238, 477, 738, 1183, 1234, 1402, 1620
Vha464I CTTAAG 2 cut(s) 377, 632
VpaK11BI GGWCC 2 cut(s) 273, 1344
XapI RAATTY 2 cut(s) 391, 1670
XceI RCATGY 6 cut(s) 307, 644, 922, 1007, 1300, 1465
XcmI CCANNNNNNNNNTGG 1 cut(s) 22
XhoI CTCGAG 1 cut(s) 1214
XmiI GTMKAC 1 cut(s) 1329
XspI CTAG 3 cut(s) 1160, 1466, 1520
ZrmI AGTACT 1 cut(s) 248
Zsp2I ATGCAT 1 cut(s) 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.