RLG00000032124
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
11202678 .. 11204145
1468 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032124

Sequence Viewer

Length: 990 bp
ATGGAAAGTCTTTCTAATCATACTTCAGCTTGGGGTTTGGCAAATTCCATCACCATTCAAATGACTCTGAGAGCTGCAGTTGAGCTCAATGTGTTCAACATCATTGCCAAATCAGGTCCCGGAGCTCACCTGACATCAAAAGAAATTGTTTCACAAATCCCCAACACAAATCCAACTTTCGCAGGTGACAATTTGGAGCGAATGCTCAAACTTTTGAGTGTTCATTCTCTTTTGTCCACATCCGTAAGACCAAACCCTACTGATAAGACAAAGCAAGAAACAAGTTATGGGCTAACAAAGGAAGCACTTTGCCTAGTCCCGAATGAAGATGGAGTTTCTTTTGCCCCGAATATATTGTGGGGCTCCGAAATGCTCGTTGCGAAGAGCTTTTACATGCTCAAGTACAAGGTGCTTGAACCGGAGAGTTCTCCCTTTCTCAAAGCCCATGGAGAGAGTCTTTATGACTACATGTCTAACAAGCCTGAGCTGTGCCAATTGTTTGACAAGGTGATGGGACTAAATTCTTACCTATATTTTGATCATAAGGTGTTTGAGGTTTACAAAGGTTTCGAAGAGGTGAAGGATCGAGCTGATGGATGTGTGGAGCATGTAAGTGGAGATATGTTTGATTTAATACCAAAGACGCAGTCAGTCATGTTGATGTGGGTACTCCATAATTGGGATGATGAACACTGTAAAAAGATATTGAGAAACTGTTGGGAGGCAATACCTGATTATGGGAAGGTAATAGTTGTTGAGCACCATGTAATGCCTGAACTAGTTGAGAATACCCCAGAAATGAAGCAAGTGTTATGTATGGACATATTCATGATGACCATGTTTTCTGGTGGTAAGGAGCGAACAACTGCTGAATTTGATATCCTGGCCAAATCCGTAGGTTTCGTTGAAACAAAGATCTTCCCGCTTCCTCGTGGGAGTCATGTTATTGAGTTTCTTAAGGGCGGGACCGTGGGATCGTTGGATAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

330

Amino Acids

37.04

Weight (kDa)

5.59

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 11 - 106 2.8e-11 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 195 - 301 2.3e-25 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 173
Acc36I ACCTGC 1 cut(s) 173
AciI CCGC 2 cut(s) 923, 963
AclWI GGATC 2 cut(s) 591, 982
AcoI YGGCCR 1 cut(s) 885
AcsI RAATTY 3 cut(s) 43, 520, 872
AcuI CTGAAG 1 cut(s) 9
AfaI GTAC 2 cut(s) 404, 669
AfiI CCNNNNNNNGG 2 cut(s) 679, 737
AflII CTTAAG 1 cut(s) 956
AflIII ACRYGT 1 cut(s) 468
AgsI TTSAA 4 cut(s) 59, 97, 416, 908
AhdI GACNNNNNGTC 1 cut(s) 469
AhlI ACTAGT 1 cut(s) 778
AjnI CCWGG 1 cut(s) 882
AluBI AGCT 7 cut(s) 29, 74, 85, 125, 387, 487, 590
AluI AGCT 7 cut(s) 29, 74, 85, 125, 387, 487, 590
Alw21I GWGCWC 3 cut(s) 87, 127, 762
AlwI GGATC 2 cut(s) 591, 982
AoxI GGCC 1 cut(s) 885
ApeKI GCWGC 1 cut(s) 74
ApoI RAATTY 3 cut(s) 43, 520, 872
ArsI GACNNNNNNTTYG 2 cut(s) 632, 664
AspS9I GGNCC 2 cut(s) 116, 966
AsuC2I CCSGG 1 cut(s) 120
AsuHPI GGTGA 5 cut(s) 43, 119, 197, 520, 589
AsuII TTCGAA 1 cut(s) 570
AvaII GGWCC 2 cut(s) 116, 966
BalI TGGCCA 1 cut(s) 887
BanII GRGCYC 3 cut(s) 87, 127, 365
BarI GAAGNNNNNNTAC 2 cut(s) 374, 406
BauI CACGAG 1 cut(s) 930
Bbv12I GWGCWC 3 cut(s) 87, 127, 762
BbvI GCAGC 1 cut(s) 61
BccI CCATC 4 cut(s) 56, 323, 505, 587
BciT130I CCWGG 1 cut(s) 884
BclI TGATCA 1 cut(s) 538
BcnI CCSGG 1 cut(s) 120
BcuI ACTAGT 1 cut(s) 778
BfaI CTAG 2 cut(s) 314, 779
BfmI CTRYAG 1 cut(s) 75
BfrI CTTAAG 1 cut(s) 956
BfuAI ACCTGC 1 cut(s) 173
BglII AGATCT 1 cut(s) 915
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
Bme1390I CCNGG 2 cut(s) 120, 884
Bme18I GGWCC 2 cut(s) 116, 966
BmeRI GACNNNNNGTC 1 cut(s) 469
BmgT120I GGNCC 2 cut(s) 116, 966
BmiI GGNNCC 3 cut(s) 118, 364, 967
BmrFI CCNGG 2 cut(s) 120, 884
Bpu10I CCTNAGC 1 cut(s) 483
Bpu14I TTCGAA 1 cut(s) 570
BpuEI CTTGAG 1 cut(s) 383
BpuMI CCSGG 1 cut(s) 120
BsaJI CCNNGG 2 cut(s) 445, 969
BsaWI WCCGGW 1 cut(s) 418
Bsc4I CCNNNNNNNGG 2 cut(s) 679, 737
Bse3DI GCAATG 1 cut(s) 102
BseBI CCWGG 1 cut(s) 884
BseDI CCNNGG 2 cut(s) 445, 969
BseGI GGATG 3 cut(s) 239, 602, 688
BseLI CCNNNNNNNGG 2 cut(s) 679, 737
BseMI GCAATG 1 cut(s) 102
BseMII CTCAG 2 cut(s) 59, 474
BseXI GCAGC 1 cut(s) 61
BshFI GGCC 1 cut(s) 887
BsiHKAI GWGCWC 3 cut(s) 87, 127, 762
BsiSI CCGG 2 cut(s) 120, 419
BslFI GGGAC 4 cut(s) 102, 302, 528, 979
BslI CCNNNNNNNGG 2 cut(s) 679, 737
BsmFI GGGAC 4 cut(s) 102, 302, 528, 979
BsmI GAATGC 1 cut(s) 207
BsnI GGCC 1 cut(s) 887
Bsp119I TTCGAA 1 cut(s) 570
Bsp1286I GDGCHC 4 cut(s) 87, 127, 365, 762
Bsp143I GATC 4 cut(s) 538, 583, 915, 974
Bsp19I CCATGG 1 cut(s) 445
BspACI CCGC 2 cut(s) 923, 963
BspANI GGCC 1 cut(s) 887
BspCNI CTCAG 2 cut(s) 60, 475
BspHI TCATGA 1 cut(s) 828
BspLI GGNNCC 3 cut(s) 118, 364, 967
BspMAI CTGCAG 1 cut(s) 79
BspMI ACCTGC 1 cut(s) 173
BspPI GGATC 2 cut(s) 591, 982
BspQI GCTCTTC 1 cut(s) 377
BspT104I TTCGAA 1 cut(s) 570
BspTI CTTAAG 1 cut(s) 956
BsrDI GCAATG 1 cut(s) 102
BssECI CCNNGG 2 cut(s) 445, 969
BssMI GATC 4 cut(s) 538, 583, 915, 974
BssSI CACGAG 1 cut(s) 930
BssT1I CCWWGG 1 cut(s) 445
Bst2BI CACGAG 1 cut(s) 930
Bst2UI CCWGG 1 cut(s) 884
Bst4CI ACNGT 3 cut(s) 695, 716, 970
Bst6I CTCTTC 2 cut(s) 377, 567
BstAFI CTTAAG 1 cut(s) 956
BstBI TTCGAA 1 cut(s) 570
BstDEI CTNAG 2 cut(s) 68, 483
BstDSI CCRYGG 2 cut(s) 445, 969
BstF5I GGATG 3 cut(s) 239, 602, 688
BstKTI GATC 4 cut(s) 541, 586, 918, 977
BstMBI GATC 4 cut(s) 538, 583, 915, 974
BstNI CCWGG 1 cut(s) 884
BstNSI RCATGY 3 cut(s) 397, 472, 611
BstSCI CCNGG 2 cut(s) 118, 882
BstSFI CTRYAG 1 cut(s) 75
BstV1I GCAGC 1 cut(s) 61
BstX2I RGATCY 1 cut(s) 915
BstYI RGATCY 1 cut(s) 915
BsuRI GGCC 1 cut(s) 887
BtgI CCRYGG 2 cut(s) 445, 969
BtsCI GGATG 3 cut(s) 239, 602, 688
BtsIMutI CAGTG 1 cut(s) 691
BveI ACCTGC 1 cut(s) 173
CciI TCATGA 1 cut(s) 828
Cfr13I GGNCC 2 cut(s) 116, 966
CseI GACGC 1 cut(s) 652
Csp6I GTAC 2 cut(s) 403, 668
CviAII CATG 9 cut(s) 394, 446, 469, 608, 655, 764, 829, 838, 941
CviQI GTAC 2 cut(s) 403, 668
DdeI CTNAG 2 cut(s) 68, 483
DpnI GATC 4 cut(s) 540, 585, 917, 976
DpnII GATC 4 cut(s) 538, 583, 915, 974
DriI GACNNNNNGTC 1 cut(s) 469
EaeI YGGCCR 1 cut(s) 885
Eam1104I CTCTTC 2 cut(s) 377, 567
Eam1105I GACNNNNNGTC 1 cut(s) 469
EarI CTCTTC 2 cut(s) 377, 567
Ecl136II GAGCTC 2 cut(s) 85, 125
Eco130I CCWWGG 1 cut(s) 445
Eco24I GRGCYC 3 cut(s) 87, 127, 365
Eco32I GATATC 1 cut(s) 880
Eco47I GGWCC 2 cut(s) 116, 966
Eco53kI GAGCTC 2 cut(s) 85, 125
Eco57I CTGAAG 1 cut(s) 9
EcoICRI GAGCTC 2 cut(s) 85, 125
EcoO109I RGGNCCY 1 cut(s) 116
EcoRII CCWGG 1 cut(s) 882
EcoRV GATATC 1 cut(s) 880
EcoT14I CCWWGG 1 cut(s) 445
EcoT38I GRGCYC 3 cut(s) 87, 127, 365
ErhI CCWWGG 1 cut(s) 445
FaeI CATG 9 cut(s) 397, 449, 472, 611, 658, 767, 832, 841, 944
FaqI GGGAC 4 cut(s) 102, 302, 528, 979
FatI CATG 9 cut(s) 393, 445, 468, 607, 654, 763, 828, 837, 940
FauI CCCGC 2 cut(s) 930, 956
FbaI TGATCA 1 cut(s) 538
Fnu4HI GCNGC 1 cut(s) 75
FokI GGATG 3 cut(s) 226, 609, 695
FriOI GRGCYC 3 cut(s) 87, 127, 365
Fsp4HI GCNGC 1 cut(s) 75
FspBI CTAG 2 cut(s) 314, 779
GluI GCNGC 1 cut(s) 75
HaeIII GGCC 1 cut(s) 887
HapII CCGG 2 cut(s) 120, 419
HgaI GACGC 1 cut(s) 652
Hin1II CATG 9 cut(s) 397, 449, 472, 611, 658, 767, 832, 841, 944
HinfI GANTC 3 cut(s) 64, 454, 937
HpaII CCGG 2 cut(s) 120, 419
HphI GGTGA 5 cut(s) 43, 119, 197, 520, 589
Hpy166II GTNNAC 2 cut(s) 237, 559
Hpy188I TCNGA 2 cut(s) 69, 367
Hpy188III TCNNGA 2 cut(s) 319, 829
Hpy8I GTNNAC 2 cut(s) 237, 559
HpyAV CCTTC 2 cut(s) 574, 736
HpyCH4III ACNGT 3 cut(s) 695, 716, 970
HpyCH4V TGCA 1 cut(s) 77
HpyF3I CTNAG 2 cut(s) 68, 483
Hsp92II CATG 9 cut(s) 397, 449, 472, 611, 658, 767, 832, 841, 944
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 4 cut(s) 538, 583, 915, 974
LguI GCTCTTC 1 cut(s) 377
LmnI GCTCC 5 cut(s) 122, 196, 368, 604, 856
Lsp1109I GCAGC 1 cut(s) 61
MaeI CTAG 2 cut(s) 314, 779
MaeIII GTNAC 1 cut(s) 185
MalI GATC 4 cut(s) 540, 585, 917, 976
MboI GATC 4 cut(s) 538, 583, 915, 974
MboII GAAGA 4 cut(s) 338, 394, 584, 910
MfeI CAATTG 1 cut(s) 494
MflI RGATCY 1 cut(s) 915
MhlI GDGCHC 4 cut(s) 87, 127, 365, 762
MlsI TGGCCA 1 cut(s) 887
MluCI AATT 7 cut(s) 43, 144, 190, 494, 520, 676, 872
MluNI TGGCCA 1 cut(s) 887
MlyI GAGTC 3 cut(s) 58, 463, 946
MmeI TCCRAC 2 cut(s) 197, 960
MnlI CCTC 4 cut(s) 547, 568, 715, 939
Mox20I TGGCCA 1 cut(s) 887
MscI TGGCCA 1 cut(s) 887
MseI TTAA 2 cut(s) 632, 957
MslI CAYNNNNRTG 4 cut(s) 59, 612, 659, 827
Msp20I TGGCCA 1 cut(s) 887
MspCI CTTAAG 1 cut(s) 956
MspI CCGG 2 cut(s) 120, 419
MspR9I CCNGG 2 cut(s) 120, 884
MunI CAATTG 1 cut(s) 494
Mva1269I GAATGC 1 cut(s) 207
MvaI CCWGG 1 cut(s) 884
NciI CCSGG 1 cut(s) 120
NcoI CCATGG 1 cut(s) 445
NdeII GATC 4 cut(s) 538, 583, 915, 974
NlaIII CATG 9 cut(s) 397, 449, 472, 611, 658, 767, 832, 841, 944
NlaIV GGNNCC 3 cut(s) 118, 364, 967
NmuCI GTSAC 1 cut(s) 185
NspI RCATGY 3 cut(s) 397, 472, 611
NspV TTCGAA 1 cut(s) 570
PagI TCATGA 1 cut(s) 828
PaqCI CACCTGC 1 cut(s) 173
PciI ACATGT 1 cut(s) 468
PciSI GCTCTTC 1 cut(s) 377
PctI GAATGC 1 cut(s) 207
PflFI GACNNNGTC 1 cut(s) 646
PfoI TCCNGGA 1 cut(s) 118
PkrI GCNGC 1 cut(s) 76
PleI GAGTC 3 cut(s) 58, 462, 945
PpsI GAGTC 3 cut(s) 58, 462, 945
PpuMI RGGWCCY 1 cut(s) 116
PscI ACATGT 1 cut(s) 468
Psp124BI GAGCTC 2 cut(s) 87, 127
Psp5II RGGWCCY 1 cut(s) 116
Psp6I CCWGG 1 cut(s) 882
PspGI CCWGG 1 cut(s) 882
PspN4I GGNNCC 3 cut(s) 118, 364, 967
PspPI GGNCC 2 cut(s) 116, 966
PspPPI RGGWCCY 1 cut(s) 116
PstI CTGCAG 1 cut(s) 79
PsuI RGATCY 1 cut(s) 915
PsyI GACNNNGTC 1 cut(s) 646
RsaI GTAC 2 cut(s) 404, 669
RsaNI GTAC 2 cut(s) 403, 668
RseI CAYNNNNRTG 4 cut(s) 59, 612, 659, 827
SacI GAGCTC 2 cut(s) 87, 127
SapI GCTCTTC 1 cut(s) 377
SaqAI TTAA 2 cut(s) 632, 957
SatI GCNGC 1 cut(s) 75
Sau3AI GATC 4 cut(s) 538, 583, 915, 974
Sau96I GGNCC 2 cut(s) 116, 966
SchI GAGTC 3 cut(s) 58, 463, 946
ScrFI CCNGG 2 cut(s) 120, 884
SduI GDGCHC 4 cut(s) 87, 127, 365, 762
SfcI CTRYAG 1 cut(s) 75
SfuI TTCGAA 1 cut(s) 570
SinI GGWCC 2 cut(s) 116, 966
SmiMI CAYNNNNRTG 4 cut(s) 59, 612, 659, 827
SmlI CTYRAG 2 cut(s) 398, 956
SmoI CTYRAG 2 cut(s) 398, 956
SpeI ACTAGT 1 cut(s) 778
Sse9I AATT 7 cut(s) 43, 144, 190, 494, 520, 676, 872
SsiI CCGC 2 cut(s) 923, 963
SspMI CTAG 2 cut(s) 314, 779
SstI GAGCTC 2 cut(s) 87, 127
StyD4I CCNGG 2 cut(s) 118, 882
StyI CCWWGG 1 cut(s) 445
TaaI ACNGT 3 cut(s) 695, 716, 970
TaqI TCGA 2 cut(s) 570, 586
TasI AATT 7 cut(s) 43, 144, 190, 494, 520, 676, 872
TatI WGTACW 1 cut(s) 402
Tru1I TTAA 2 cut(s) 632, 957
Tru9I TTAA 2 cut(s) 632, 957
TscAI CASTG 1 cut(s) 698
TseFI GTSAC 1 cut(s) 185
TseI GCWGC 1 cut(s) 74
Tsp45I GTSAC 1 cut(s) 185
TspDTI ATGAA 5 cut(s) 212, 339, 702, 815, 817
TspGWI ACGGA 2 cut(s) 232, 883
TspRI CASTG 1 cut(s) 698
Tth111I GACNNNGTC 1 cut(s) 646
Vha464I CTTAAG 1 cut(s) 956
VpaK11BI GGWCC 2 cut(s) 116, 966
XapI RAATTY 3 cut(s) 43, 520, 872
XceI RCATGY 3 cut(s) 397, 472, 611
XspI CTAG 2 cut(s) 314, 779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.