Leucine-rich repeats, outliers
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 77 - 162 | 7e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 86 - 156 | 6.9e-13 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 157 - 241 | 1.9e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 180 - 256 | 9.5e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 226 - 295 | 4.2e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 227 - 326 | 9.2e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 296 - 382 | 3.7e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 323 - 377 | 7.3e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 587 - 654 | 2.7e-15 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1935 |
| AccB1I | GGYRCC | 2 cut(s) | 1291, 1326 |
| AccI | GTMKAC | 3 cut(s) | 658, 2571, 2813 |
| AccII | CGCG | 2 cut(s) | 1582, 2976 |
| AccIII | TCCGGA | 2 cut(s) | 730, 940 |
| AciI | CCGC | 8 cut(s) | 688, 1184, 1803, 2031, 2127, 2143, 2932, 2994 |
| AclWI | GGATC | 3 cut(s) | 1515, 2301, 2766 |
| AcsI | RAATTY | 7 cut(s) | 52, 304, 315, 437, 2067, 2375, 2747 |
| AcuI | CTGAAG | 2 cut(s) | 1013, 2499 |
| AfaI | GTAC | 3 cut(s) | 969, 1628, 3043 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2545 |
| AflII | CTTAAG | 4 cut(s) | 230, 650, 719, 860 |
| AflIII | ACRYGT | 2 cut(s) | 1752, 2974 |
| AjnI | CCWGG | 2 cut(s) | 1068, 1762 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2377, 2409 |
| Alw21I | GWGCWC | 4 cut(s) | 1136, 1249, 2155, 2515 |
| Alw26I | GTCTC | 4 cut(s) | 1761, 1962, 2210, 2655 |
| AlwI | GGATC | 3 cut(s) | 1515, 2301, 2766 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 462 |
| Ama87I | CYCGRG | 3 cut(s) | 1154, 2845, 3243 |
| Aor13HI | TCCGGA | 2 cut(s) | 730, 940 |
| AoxI | GGCC | 4 cut(s) | 403, 496, 2137, 2763 |
| ApoI | RAATTY | 7 cut(s) | 52, 304, 315, 437, 2067, 2375, 2747 |
| AseI | ATTAAT | 7 cut(s) | 390, 600, 810, 2178, 2466, 2583, 3207 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 306, 2376, 2496, 2562 |
| AspLEI | GCGC | 3 cut(s) | 1582, 1874, 2349 |
| AspS9I | GGNCC | 3 cut(s) | 166, 418, 3024 |
| AsuHPI | GGTGA | 2 cut(s) | 1997, 2183 |
| AsuII | TTCGAA | 1 cut(s) | 2338 |
| AsuNHI | GCTAGC | 1 cut(s) | 211 |
| AvaI | CYCGRG | 3 cut(s) | 1154, 2845, 3243 |
| AvaII | GGWCC | 3 cut(s) | 166, 418, 3024 |
| AxyI | CCTNAGG | 1 cut(s) | 2415 |
| BaeGI | GKGCMC | 1 cut(s) | 2899 |
| BanI | GGYRCC | 2 cut(s) | 1291, 1326 |
| BanII | GRGCYC | 3 cut(s) | 1249, 2155, 2515 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1203, 1235, 1610, 1642 |
| BbsI | GAAGAC | 4 cut(s) | 179, 1941, 2354, 3131 |
| Bbv12I | GWGCWC | 4 cut(s) | 1136, 1249, 2155, 2515 |
| BceAI | ACGGC | 3 cut(s) | 28, 1040, 2034 |
| BciT130I | CCWGG | 2 cut(s) | 1070, 1764 |
| BcoDI | GTCTC | 4 cut(s) | 1761, 1962, 2210, 2655 |
| BfmI | CTRYAG | 3 cut(s) | 896, 1060, 1664 |
| BfrI | CTTAAG | 4 cut(s) | 230, 650, 719, 860 |
| BfuAI | ACCTGC | 1 cut(s) | 1935 |
| BglII | AGATCT | 1 cut(s) | 583 |
| BlpI | GCTNAGC | 1 cut(s) | 338 |
| Bme1390I | CCNGG | 2 cut(s) | 1070, 1764 |
| Bme18I | GGWCC | 3 cut(s) | 166, 418, 3024 |
| BmeT110I | CYCGRG | 3 cut(s) | 1154, 2845, 3243 |
| BmgT120I | GGNCC | 3 cut(s) | 166, 418, 3024 |
| BmiI | GGNNCC | 5 cut(s) | 692, 1293, 1328, 2229, 2604 |
| BmrFI | CCNGG | 2 cut(s) | 1070, 1764 |
| BmrI | ACTGGG | 1 cut(s) | 2893 |
| BmsI | GCATC | 4 cut(s) | 468, 899, 1567, 2266 |
| BmtI | GCTAGC | 1 cut(s) | 215 |
| BmuI | ACTGGG | 1 cut(s) | 2893 |
| BpiI | GAAGAC | 4 cut(s) | 179, 1941, 2354, 3131 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1459, 1491 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1886 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 338 |
| Bpu14I | TTCGAA | 1 cut(s) | 2338 |
| BpuEI | CTTGAG | 6 cut(s) | 146, 306, 950, 1175, 2672, 2785 |
| BsaAI | YACGTR | 3 cut(s) | 761, 971, 2159 |
| BsaBI | GATNNNNATC | 2 cut(s) | 348, 1389 |
| BsaI | GGTCTC | 1 cut(s) | 2210 |
| BsaJI | CCNNGG | 4 cut(s) | 1763, 1971, 2190, 2220 |
| BsaWI | WCCGGW | 2 cut(s) | 730, 940 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2545 |
| Bse1I | ACTGG | 2 cut(s) | 1360, 2899 |
| Bse21I | CCTNAGG | 1 cut(s) | 2415 |
| Bse3DI | GCAATG | 1 cut(s) | 1986 |
| Bse8I | GATNNNNATC | 2 cut(s) | 348, 1389 |
| BseAI | TCCGGA | 2 cut(s) | 730, 940 |
| BseBI | CCWGG | 2 cut(s) | 1070, 1764 |
| BseDI | CCNNGG | 4 cut(s) | 1763, 1971, 2190, 2220 |
| BseGI | GGATG | 4 cut(s) | 169, 173, 1414, 2526 |
| BseJI | GATNNNNATC | 2 cut(s) | 348, 1389 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2545 |
| BseMI | GCAATG | 1 cut(s) | 1986 |
| BseMII | CTCAG | 5 cut(s) | 436, 1349, 1525, 2273, 2634 |
| BseNI | ACTGG | 2 cut(s) | 1360, 2899 |
| BseRI | GAGGAG | 1 cut(s) | 2885 |
| BseSI | GKGCMC | 1 cut(s) | 2899 |
| BseYI | CCCAGC | 1 cut(s) | 242 |
| BsgI | GTGCAG | 2 cut(s) | 1471, 1841 |
| Bsh1236I | CGCG | 2 cut(s) | 1582, 2976 |
| BshFI | GGCC | 4 cut(s) | 405, 498, 2139, 2765 |
| BshNI | GGYRCC | 2 cut(s) | 1291, 1326 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1136, 1249, 2155, 2515 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1154, 2845, 3243 |
| BsiSI | CCGG | 2 cut(s) | 731, 941 |
| BslFI | GGGAC | 3 cut(s) | 793, 1003, 1180 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2545 |
| BsmAI | GTCTC | 4 cut(s) | 1761, 1962, 2210, 2655 |
| BsmBI | CGTCTC | 1 cut(s) | 2655 |
| BsmFI | GGGAC | 3 cut(s) | 793, 1003, 1180 |
| BsmI | GAATGC | 4 cut(s) | 249, 669, 879, 1708 |
| BsnI | GGCC | 4 cut(s) | 405, 498, 2139, 2765 |
| Bso31I | GGTCTC | 1 cut(s) | 2210 |
| BsoBI | CYCGRG | 3 cut(s) | 1154, 2845, 3243 |
| Bsp119I | TTCGAA | 1 cut(s) | 2338 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1136, 1249, 2155, 2515, 2899 |
| Bsp13I | TCCGGA | 2 cut(s) | 730, 940 |
| Bsp143I | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 338 |
| Bsp19I | CCATGG | 1 cut(s) | 2220 |
| BspACI | CCGC | 8 cut(s) | 688, 1184, 1803, 2031, 2127, 2143, 2932, 2994 |
| BspANI | GGCC | 4 cut(s) | 405, 498, 2139, 2765 |
| BspCNI | CTCAG | 5 cut(s) | 435, 1348, 1524, 2272, 2633 |
| BspEI | TCCGGA | 2 cut(s) | 730, 940 |
| BspFNI | CGCG | 2 cut(s) | 1582, 2976 |
| BspHI | TCATGA | 1 cut(s) | 2730 |
| BspLI | GGNNCC | 5 cut(s) | 692, 1293, 1328, 2229, 2604 |
| BspMAI | CTGCAG | 2 cut(s) | 1064, 1668 |
| BspMI | ACCTGC | 1 cut(s) | 1935 |
| BspOI | GCTAGC | 1 cut(s) | 215 |
| BspPI | GGATC | 3 cut(s) | 1515, 2301, 2766 |
| BspT104I | TTCGAA | 1 cut(s) | 2338 |
| BspT107I | GGYRCC | 2 cut(s) | 1291, 1326 |
| BspTI | CTTAAG | 4 cut(s) | 230, 650, 719, 860 |
| BspTNI | GGTCTC | 1 cut(s) | 2210 |
| BsrDI | GCAATG | 1 cut(s) | 1986 |
| BsrI | ACTGG | 2 cut(s) | 1360, 2899 |
| BssECI | CCNNGG | 4 cut(s) | 1763, 1971, 2190, 2220 |
| BssMI | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| BssT1I | CCWWGG | 2 cut(s) | 1971, 2220 |
| Bst2UI | CCWGG | 2 cut(s) | 1070, 1764 |
| Bst4CI | ACNGT | 5 cut(s) | 221, 1088, 1606, 1626, 1847 |
| Bst6I | CTCTTC | 5 cut(s) | 1746, 2487, 2538, 2942, 3005 |
| BstAFI | CTTAAG | 4 cut(s) | 230, 650, 719, 860 |
| BstBAI | YACGTR | 3 cut(s) | 761, 971, 2159 |
| BstBI | TTCGAA | 1 cut(s) | 2338 |
| BstC8I | GCNNGC | 7 cut(s) | 213, 1151, 1664, 1733, 2141, 2145, 2244 |
| BstDSI | CCRYGG | 1 cut(s) | 2220 |
| BstF5I | GGATG | 4 cut(s) | 169, 173, 1414, 2526 |
| BstFNI | CGCG | 2 cut(s) | 1582, 2976 |
| BstHHI | GCGC | 3 cut(s) | 1582, 1874, 2349 |
| BstKTI | GATC | 7 cut(s) | 346, 586, 1123, 1510, 1739, 2296, 2761 |
| BstMAI | GTCTC | 4 cut(s) | 1761, 1962, 2210, 2655 |
| BstMBI | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 553, 1871, 2018, 2030 |
| BstNI | CCWGG | 2 cut(s) | 1070, 1764 |
| BstNSI | RCATGY | 1 cut(s) | 1756 |
| BstSCI | CCNGG | 2 cut(s) | 1068, 1762 |
| BstSFI | CTRYAG | 3 cut(s) | 896, 1060, 1664 |
| BstSLI | GKGCMC | 1 cut(s) | 2899 |
| BstUI | CGCG | 2 cut(s) | 1582, 2976 |
| BstV2I | GAAGAC | 4 cut(s) | 179, 1941, 2354, 3131 |
| BstX2I | RGATCY | 2 cut(s) | 583, 1507 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1836 |
| BstYI | RGATCY | 2 cut(s) | 583, 1507 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2415 |
| BsuRI | GGCC | 4 cut(s) | 405, 498, 2139, 2765 |
| BtgI | CCRYGG | 1 cut(s) | 2220 |
| BtsCI | GGATG | 4 cut(s) | 169, 173, 1414, 2526 |
| BtsIMutI | CAGTG | 2 cut(s) | 1050, 1093 |
| BveI | ACCTGC | 1 cut(s) | 1935 |
| Cac8I | GCNNGC | 7 cut(s) | 213, 1151, 1664, 1733, 2141, 2145, 2244 |
| CaiI | CAGNNNCTG | 1 cut(s) | 462 |
| CciI | TCATGA | 1 cut(s) | 2730 |
| CfoI | GCGC | 3 cut(s) | 1582, 1874, 2349 |
| Cfr13I | GGNCC | 3 cut(s) | 166, 418, 3024 |
| CseI | GACGC | 3 cut(s) | 550, 1915, 3125 |
| Csp6I | GTAC | 3 cut(s) | 968, 1627, 3042 |
| CviQI | GTAC | 3 cut(s) | 968, 1627, 3042 |
| DpnI | GATC | 7 cut(s) | 345, 585, 1122, 1509, 1738, 2295, 2760 |
| DpnII | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| DraI | TTTAAA | 2 cut(s) | 57, 1173 |
| Eam1104I | CTCTTC | 5 cut(s) | 1746, 2487, 2538, 2942, 3005 |
| EarI | CTCTTC | 5 cut(s) | 1746, 2487, 2538, 2942, 3005 |
| EciI | GGCGGA | 1 cut(s) | 1199 |
| Ecl136II | GAGCTC | 3 cut(s) | 1247, 2153, 2513 |
| Eco130I | CCWWGG | 2 cut(s) | 1971, 2220 |
| Eco147I | AGGCCT | 1 cut(s) | 405 |
| Eco24I | GRGCYC | 3 cut(s) | 1249, 2155, 2515 |
| Eco31I | GGTCTC | 1 cut(s) | 2210 |
| Eco32I | GATATC | 2 cut(s) | 2005, 2632 |
| Eco47I | GGWCC | 3 cut(s) | 166, 418, 3024 |
| Eco53kI | GAGCTC | 3 cut(s) | 1247, 2153, 2513 |
| Eco57I | CTGAAG | 2 cut(s) | 1013, 2499 |
| Eco81I | CCTNAGG | 1 cut(s) | 2415 |
| Eco88I | CYCGRG | 3 cut(s) | 1154, 2845, 3243 |
| EcoICRI | GAGCTC | 3 cut(s) | 1247, 2153, 2513 |
| EcoRII | CCWGG | 2 cut(s) | 1068, 1762 |
| EcoRV | GATATC | 2 cut(s) | 2005, 2632 |
| EcoT14I | CCWWGG | 2 cut(s) | 1971, 2220 |
| EcoT22I | ATGCAT | 1 cut(s) | 2701 |
| EcoT38I | GRGCYC | 3 cut(s) | 1249, 2155, 2515 |
| ErhI | CCWWGG | 2 cut(s) | 1971, 2220 |
| Esp3I | CGTCTC | 1 cut(s) | 2655 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1280, 1312, 2349, 2381 |
| FaqI | GGGAC | 3 cut(s) | 793, 1003, 1180 |
| FauI | CCCGC | 2 cut(s) | 2120, 2136 |
| FauNDI | CATATG | 2 cut(s) | 255, 2701 |
| FblI | GTMKAC | 3 cut(s) | 658, 2571, 2813 |
| FokI | GGATG | 4 cut(s) | 156, 160, 1421, 2513 |
| FriOI | GRGCYC | 3 cut(s) | 1249, 2155, 2515 |
| GlaI | GCGC | 3 cut(s) | 1581, 1873, 2348 |
| GsaI | CCCAGC | 1 cut(s) | 246 |
| HaeIII | GGCC | 4 cut(s) | 405, 498, 2139, 2765 |
| HapII | CCGG | 2 cut(s) | 731, 941 |
| HgaI | GACGC | 3 cut(s) | 550, 1915, 3125 |
| HhaI | GCGC | 3 cut(s) | 1582, 1874, 2349 |
| Hin6I | GCGC | 3 cut(s) | 1580, 1872, 2347 |
| HinP1I | GCGC | 3 cut(s) | 1580, 1872, 2347 |
| HpaII | CCGG | 2 cut(s) | 731, 941 |
| HphI | GGTGA | 2 cut(s) | 1997, 2183 |
| Hpy166II | GTNNAC | 5 cut(s) | 659, 1904, 2028, 2572, 2814 |
| Hpy8I | GTNNAC | 5 cut(s) | 659, 1904, 2028, 2572, 2814 |
| HpyAV | CCTTC | 8 cut(s) | 26, 629, 745, 955, 2126, 2501, 2668, 3123 |
| HpyCH4III | ACNGT | 5 cut(s) | 221, 1088, 1606, 1626, 1847 |
| HpyCH4IV | ACGT | 3 cut(s) | 760, 970, 2158 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 553, 1871, 2018, 2030 |
| HpySE526I | ACGT | 3 cut(s) | 760, 970, 2158 |
| HspAI | GCGC | 3 cut(s) | 1580, 1872, 2347 |
| Kpn2I | TCCGGA | 2 cut(s) | 730, 940 |
| Kzo9I | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| LmnI | GCTCC | 4 cut(s) | 690, 2510, 2518, 2602 |
| LweI | GCATC | 4 cut(s) | 468, 899, 1567, 2266 |
| MaeII | ACGT | 3 cut(s) | 760, 970, 2158 |
| MaeIII | GTNAC | 7 cut(s) | 11, 409, 756, 1194, 1990, 2966, 3034 |
| MalI | GATC | 7 cut(s) | 345, 585, 1122, 1509, 1738, 2295, 2760 |
| MboI | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| MfeI | CAATTG | 1 cut(s) | 2783 |
| MflI | RGATCY | 2 cut(s) | 583, 1507 |
| MhlI | GDGCHC | 5 cut(s) | 1136, 1249, 2155, 2515, 2899 |
| MluI | ACGCGT | 1 cut(s) | 2974 |
| MlyI | GAGTC | 4 cut(s) | 454, 664, 874, 2703 |
| MmeI | TCCRAC | 4 cut(s) | 1377, 1386, 1502, 1944 |
| Mph1103I | ATGCAT | 1 cut(s) | 2701 |
| MroI | TCCGGA | 2 cut(s) | 730, 940 |
| MroXI | GAANNNNTTC | 4 cut(s) | 306, 2376, 2496, 2562 |
| MslI | CAYNNNNRTG | 5 cut(s) | 254, 354, 464, 774, 2735 |
| MspA1I | CMGCKG | 5 cut(s) | 1669, 1803, 2033, 2143, 2996 |
| MspCI | CTTAAG | 4 cut(s) | 230, 650, 719, 860 |
| MspI | CCGG | 2 cut(s) | 731, 941 |
| MspR9I | CCNGG | 2 cut(s) | 1070, 1764 |
| MunI | CAATTG | 1 cut(s) | 2783 |
| Mva1269I | GAATGC | 4 cut(s) | 249, 669, 879, 1708 |
| MvaI | CCWGG | 2 cut(s) | 1070, 1764 |
| MvnI | CGCG | 2 cut(s) | 1582, 2976 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 553, 1871, 2018, 2030 |
| NcoI | CCATGG | 1 cut(s) | 2220 |
| NdeI | CATATG | 2 cut(s) | 255, 2701 |
| NdeII | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| NheI | GCTAGC | 1 cut(s) | 211 |
| NlaIV | GGNNCC | 5 cut(s) | 692, 1293, 1328, 2229, 2604 |
| NmeAIII | GCCGAG | 1 cut(s) | 2684 |
| NmuCI | GTSAC | 1 cut(s) | 11 |
| NsiI | ATGCAT | 1 cut(s) | 2701 |
| NspI | RCATGY | 1 cut(s) | 1756 |
| NspV | TTCGAA | 1 cut(s) | 2338 |
| PaeR7I | CTCGAG | 2 cut(s) | 2845, 3243 |
| PagI | TCATGA | 1 cut(s) | 2730 |
| PceI | AGGCCT | 1 cut(s) | 405 |
| PciI | ACATGT | 1 cut(s) | 1752 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 1495, 2678, 3037, 3241 |
| PctI | GAATGC | 4 cut(s) | 249, 669, 879, 1708 |
| PdmI | GAANNNNTTC | 4 cut(s) | 306, 2376, 2496, 2562 |
| PflFI | GACNNNGTC | 2 cut(s) | 1494, 1925 |
| PleI | GAGTC | 4 cut(s) | 453, 663, 873, 2703 |
| PpsI | GAGTC | 4 cut(s) | 453, 663, 873, 2703 |
| Ppu21I | YACGTR | 3 cut(s) | 761, 971, 2159 |
| PscI | ACATGT | 1 cut(s) | 1752 |
| PshBI | ATTAAT | 7 cut(s) | 390, 600, 810, 2178, 2466, 2583, 3207 |
| Psp124BI | GAGCTC | 3 cut(s) | 1249, 2155, 2515 |
| Psp6I | CCWGG | 2 cut(s) | 1068, 1762 |
| PspFI | CCCAGC | 1 cut(s) | 242 |
| PspGI | CCWGG | 2 cut(s) | 1068, 1762 |
| PspN4I | GGNNCC | 5 cut(s) | 692, 1293, 1328, 2229, 2604 |
| PspPI | GGNCC | 3 cut(s) | 166, 418, 3024 |
| PspXI | VCTCGAGB | 1 cut(s) | 2845 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1179, 1211 |
| PstI | CTGCAG | 2 cut(s) | 1064, 1668 |
| PstNI | CAGNNNCTG | 1 cut(s) | 462 |
| PsuI | RGATCY | 2 cut(s) | 583, 1507 |
| PsyI | GACNNNGTC | 2 cut(s) | 1494, 1925 |
| PvuII | CAGCTG | 1 cut(s) | 1669 |
| RsaI | GTAC | 3 cut(s) | 969, 1628, 3043 |
| RsaNI | GTAC | 3 cut(s) | 968, 1627, 3042 |
| RseI | CAYNNNNRTG | 5 cut(s) | 254, 354, 464, 774, 2735 |
| SacI | GAGCTC | 3 cut(s) | 1249, 2155, 2515 |
| Sau3AI | GATC | 7 cut(s) | 343, 583, 1120, 1507, 1736, 2293, 2758 |
| Sau96I | GGNCC | 3 cut(s) | 166, 418, 3024 |
| SchI | GAGTC | 4 cut(s) | 454, 664, 874, 2703 |
| ScrFI | CCNGG | 2 cut(s) | 1070, 1764 |
| SduI | GDGCHC | 5 cut(s) | 1136, 1249, 2155, 2515, 2899 |
| SfaNI | GCATC | 4 cut(s) | 468, 899, 1567, 2266 |
| SfcI | CTRYAG | 3 cut(s) | 896, 1060, 1664 |
| Sfr274I | CTCGAG | 2 cut(s) | 2845, 3243 |
| SfuI | TTCGAA | 1 cut(s) | 2338 |
| SinI | GGWCC | 3 cut(s) | 166, 418, 3024 |
| SlaI | CTCGAG | 2 cut(s) | 2845, 3243 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 254, 354, 464, 774, 2735 |
| SseBI | AGGCCT | 1 cut(s) | 405 |
| SsiI | CCGC | 8 cut(s) | 688, 1184, 1803, 2031, 2127, 2143, 2932, 2994 |
| SspI | AATATT | 2 cut(s) | 3003, 3166 |
| SstI | GAGCTC | 3 cut(s) | 1249, 2155, 2515 |
| StuI | AGGCCT | 1 cut(s) | 405 |
| StyD4I | CCNGG | 2 cut(s) | 1068, 1762 |
| StyI | CCWWGG | 2 cut(s) | 1971, 2220 |
| TaaI | ACNGT | 5 cut(s) | 221, 1088, 1606, 1626, 1847 |
| TaiI | ACGT | 3 cut(s) | 763, 973, 2161 |
| TauI | GCSGC | 2 cut(s) | 2935, 2996 |
| TscAI | CASTG | 2 cut(s) | 1050, 1093 |
| TseFI | GTSAC | 1 cut(s) | 11 |
| Tsp45I | GTSAC | 1 cut(s) | 11 |
| TspGWI | ACGGA | 1 cut(s) | 1212 |
| TspRI | CASTG | 2 cut(s) | 1050, 1093 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1494, 1925 |
| Vha464I | CTTAAG | 4 cut(s) | 230, 650, 719, 860 |
| VpaK11BI | GGWCC | 3 cut(s) | 166, 418, 3024 |
| VspI | ATTAAT | 7 cut(s) | 390, 600, 810, 2178, 2466, 2583, 3207 |
| XapI | RAATTY | 7 cut(s) | 52, 304, 315, 437, 2067, 2375, 2747 |
| XbaI | TCTAGA | 4 cut(s) | 475, 562, 772, 982 |
| XceI | RCATGY | 1 cut(s) | 1756 |
| XhoI | CTCGAG | 2 cut(s) | 2845, 3243 |
| XmiI | GTMKAC | 3 cut(s) | 658, 2571, 2813 |
| XmnI | GAANNNNTTC | 4 cut(s) | 306, 2376, 2496, 2562 |
| Zsp2I | ATGCAT | 1 cut(s) | 2701 |