Zinc finger C-x8-C-x5-C-x3-H type (and similar)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2173 |
| Acc16I | TGCGCA | 1 cut(s) | 669 |
| AccI | GTMKAC | 2 cut(s) | 884, 1975 |
| AccII | CGCG | 1 cut(s) | 250 |
| AclWI | GGATC | 5 cut(s) | 197, 387, 1189, 1438, 2087 |
| AcoI | YGGCCR | 1 cut(s) | 772 |
| AcsI | RAATTY | 2 cut(s) | 917, 2140 |
| AcuI | CTGAAG | 2 cut(s) | 624, 1314 |
| AcyI | GRCGYC | 1 cut(s) | 2170 |
| AfaI | GTAC | 3 cut(s) | 702, 1148, 1767 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 710, 1003, 1140, 1748, 1749 |
| AflIII | ACRYGT | 1 cut(s) | 834 |
| AhlI | ACTAGT | 1 cut(s) | 2021 |
| AjnI | CCWGG | 5 cut(s) | 486, 847, 1157, 1216, 1636 |
| Alw21I | GWGCWC | 1 cut(s) | 818 |
| Alw26I | GTCTC | 5 cut(s) | 1218, 2012, 2065, 2161, 2257 |
| Alw44I | GTGCAC | 1 cut(s) | 814 |
| AlwI | GGATC | 5 cut(s) | 197, 387, 1189, 1438, 2087 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1889, 2102 |
| AoxI | GGCC | 2 cut(s) | 602, 772 |
| ApaLI | GTGCAC | 1 cut(s) | 814 |
| ApeKI | GCWGC | 1 cut(s) | 783 |
| ApoI | RAATTY | 2 cut(s) | 917, 2140 |
| AseI | ATTAAT | 1 cut(s) | 1065 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 930 |
| AspLEI | GCGC | 2 cut(s) | 250, 670 |
| AspS9I | GGNCC | 3 cut(s) | 467, 845, 1408 |
| AsuC2I | CCSGG | 1 cut(s) | 627 |
| AsuHPI | GGTGA | 5 cut(s) | 440, 455, 1105, 1478, 1541 |
| AvaII | GGWCC | 3 cut(s) | 467, 845, 1408 |
| AxyI | CCTNAGG | 1 cut(s) | 2223 |
| BaeGI | GKGCMC | 1 cut(s) | 818 |
| BalI | TGGCCA | 1 cut(s) | 774 |
| BauI | CACGAG | 4 cut(s) | 560, 1176, 1485, 1952 |
| BbsI | GAAGAC | 2 cut(s) | 1497, 2197 |
| Bbv12I | GWGCWC | 1 cut(s) | 818 |
| BbvI | GCAGC | 1 cut(s) | 795 |
| BccI | CCATC | 8 cut(s) | 434, 548, 1116, 1520, 1544, 1614, 1691, 1771 |
| BceAI | ACGGC | 1 cut(s) | 1437 |
| BciT130I | CCWGG | 5 cut(s) | 488, 849, 1159, 1218, 1638 |
| BclI | TGATCA | 2 cut(s) | 1414, 2104 |
| BcnI | CCSGG | 1 cut(s) | 627 |
| BcoDI | GTCTC | 5 cut(s) | 1218, 2012, 2065, 2161, 2257 |
| BcuI | ACTAGT | 1 cut(s) | 2021 |
| BfaI | CTAG | 5 cut(s) | 383, 408, 1034, 1398, 2022 |
| BfmI | CTRYAG | 1 cut(s) | 1024 |
| BglII | AGATCT | 2 cut(s) | 1357, 1394 |
| BisI | GCNGC | 4 cut(s) | 48, 90, 165, 784 |
| BlsI | GCNGC | 4 cut(s) | 49, 91, 166, 785 |
| Bme1390I | CCNGG | 6 cut(s) | 488, 627, 849, 1159, 1218, 1638 |
| Bme18I | GGWCC | 3 cut(s) | 467, 845, 1408 |
| BmgT120I | GGNCC | 3 cut(s) | 467, 845, 1408 |
| BmiI | GGNNCC | 2 cut(s) | 1409, 1451 |
| BmrFI | CCNGG | 6 cut(s) | 488, 627, 849, 1159, 1218, 1638 |
| BmsI | GCATC | 3 cut(s) | 235, 1615, 1927 |
| BpiI | GAAGAC | 2 cut(s) | 1497, 2197 |
| BpmI | CTGGAG | 2 cut(s) | 456, 777 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1593 |
| BpuEI | CTTGAG | 4 cut(s) | 422, 899, 1102, 1924 |
| BpuMI | CCSGG | 1 cut(s) | 627 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1399 |
| BsaHI | GRCGYC | 1 cut(s) | 2170 |
| BsaI | GGTCTC | 1 cut(s) | 2257 |
| BsaJI | CCNNGG | 2 cut(s) | 487, 1666 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 948, 978 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 710, 1003, 1140, 1748, 1749 |
| Bse1I | ACTGG | 3 cut(s) | 760, 1057, 2267 |
| Bse21I | CCTNAGG | 1 cut(s) | 2223 |
| Bse3DI | GCAATG | 2 cut(s) | 1015, 1601 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1399 |
| BseBI | CCWGG | 5 cut(s) | 488, 849, 1159, 1218, 1638 |
| BseDI | CCNNGG | 2 cut(s) | 487, 1666 |
| BseGI | GGATG | 4 cut(s) | 250, 439, 445, 874 |
| BseJI | GATNNNNATC | 1 cut(s) | 1399 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 710, 1003, 1140, 1748, 1749 |
| BseMI | GCAATG | 2 cut(s) | 1015, 1601 |
| BseMII | CTCAG | 4 cut(s) | 708, 1487, 1959, 2220 |
| BseNI | ACTGG | 3 cut(s) | 760, 1057, 2267 |
| BseRI | GAGGAG | 5 cut(s) | 268, 296, 347, 908, 1868 |
| BseSI | GKGCMC | 1 cut(s) | 818 |
| BseXI | GCAGC | 1 cut(s) | 795 |
| Bsh1236I | CGCG | 1 cut(s) | 250 |
| BshFI | GGCC | 2 cut(s) | 604, 774 |
| BsiHKAI | GWGCWC | 1 cut(s) | 818 |
| BsiSI | CCGG | 2 cut(s) | 206, 626 |
| BslFI | GGGAC | 5 cut(s) | 1421, 1735, 1765, 2010, 2069 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 710, 1003, 1140, 1748, 1749 |
| BsmAI | GTCTC | 5 cut(s) | 1218, 2012, 2065, 2161, 2257 |
| BsmBI | CGTCTC | 1 cut(s) | 2161 |
| BsmFI | GGGAC | 5 cut(s) | 1421, 1735, 1765, 2010, 2069 |
| BsnI | GGCC | 2 cut(s) | 604, 774 |
| Bso31I | GGTCTC | 1 cut(s) | 2257 |
| Bsp1286I | GDGCHC | 1 cut(s) | 818 |
| Bsp19I | CCATGG | 1 cut(s) | 1666 |
| BspANI | GGCC | 2 cut(s) | 604, 774 |
| BspCNI | CTCAG | 4 cut(s) | 709, 1486, 1960, 2219 |
| BspFNI | CGCG | 1 cut(s) | 250 |
| BspHI | TCATGA | 2 cut(s) | 1522, 1861 |
| BspLI | GGNNCC | 2 cut(s) | 1409, 1451 |
| BspPI | GGATC | 5 cut(s) | 197, 387, 1189, 1438, 2087 |
| BspQI | GCTCTTC | 1 cut(s) | 24 |
| BspTNI | GGTCTC | 1 cut(s) | 2257 |
| BsrDI | GCAATG | 2 cut(s) | 1015, 1601 |
| BsrI | ACTGG | 3 cut(s) | 760, 1057, 2267 |
| BssECI | CCNNGG | 2 cut(s) | 487, 1666 |
| BssNAI | GTATAC | 1 cut(s) | 885 |
| BssNI | GRCGYC | 1 cut(s) | 2170 |
| BssSI | CACGAG | 4 cut(s) | 560, 1176, 1485, 1952 |
| BssT1I | CCWWGG | 1 cut(s) | 1666 |
| Bst1107I | GTATAC | 1 cut(s) | 885 |
| Bst2BI | CACGAG | 4 cut(s) | 560, 1176, 1485, 1952 |
| Bst2UI | CCWGG | 5 cut(s) | 488, 849, 1159, 1218, 1638 |
| Bst4CI | ACNGT | 4 cut(s) | 1520, 1538, 1587, 1885 |
| BstACI | GRCGYC | 1 cut(s) | 2170 |
| BstC8I | GCNNGC | 5 cut(s) | 9, 776, 1189, 1505, 1509 |
| BstDEI | CTNAG | 7 cut(s) | 192, 717, 1473, 1593, 1968, 2206, 2223 |
| BstDSI | CCRYGG | 1 cut(s) | 1666 |
| BstF5I | GGATG | 4 cut(s) | 250, 439, 445, 874 |
| BstFNI | CGCG | 1 cut(s) | 250 |
| BstHHI | GCGC | 2 cut(s) | 250, 670 |
| BstMAI | GTCTC | 5 cut(s) | 1218, 2012, 2065, 2161, 2257 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 780, 1049, 1504 |
| BstNI | CCWGG | 5 cut(s) | 488, 849, 1159, 1218, 1638 |
| BstNSI | RCATGY | 2 cut(s) | 838, 1511 |
| BstSCI | CCNGG | 6 cut(s) | 486, 625, 847, 1157, 1216, 1636 |
| BstSFI | CTRYAG | 1 cut(s) | 1024 |
| BstSLI | GKGCMC | 1 cut(s) | 818 |
| BstUI | CGCG | 1 cut(s) | 250 |
| BstV1I | GCAGC | 1 cut(s) | 795 |
| BstV2I | GAAGAC | 2 cut(s) | 1497, 2197 |
| BstX2I | RGATCY | 5 cut(s) | 379, 1181, 1357, 1394, 1430 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1266 |
| BstYI | RGATCY | 5 cut(s) | 379, 1181, 1357, 1394, 1430 |
| BstZ17I | GTATAC | 1 cut(s) | 885 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2223 |
| BsuRI | GGCC | 2 cut(s) | 604, 774 |
| BtgI | CCRYGG | 1 cut(s) | 1666 |
| BtgZI | GCGATG | 3 cut(s) | 137, 2103, 2159 |
| BtsCI | GGATG | 4 cut(s) | 250, 439, 445, 874 |
| BtsIMutI | CAGTG | 1 cut(s) | 2274 |
| Cac8I | GCNNGC | 5 cut(s) | 9, 776, 1189, 1505, 1509 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1889, 2102 |
| CciI | TCATGA | 2 cut(s) | 1522, 1861 |
| CfoI | GCGC | 2 cut(s) | 250, 670 |
| Cfr13I | GGNCC | 3 cut(s) | 467, 845, 1408 |
| Csp6I | GTAC | 3 cut(s) | 701, 1147, 1766 |
| CviQI | GTAC | 3 cut(s) | 701, 1147, 1766 |
| DdeI | CTNAG | 7 cut(s) | 192, 717, 1473, 1593, 1968, 2206, 2223 |
| EaeI | YGGCCR | 1 cut(s) | 772 |
| EciI | GGCGGA | 2 cut(s) | 107, 224 |
| Eco130I | CCWWGG | 1 cut(s) | 1666 |
| Eco147I | AGGCCT | 1 cut(s) | 604 |
| Eco31I | GGTCTC | 1 cut(s) | 2257 |
| Eco32I | GATATC | 1 cut(s) | 2036 |
| Eco47I | GGWCC | 3 cut(s) | 467, 845, 1408 |
| Eco57I | CTGAAG | 2 cut(s) | 624, 1314 |
| Eco81I | CCTNAGG | 1 cut(s) | 2223 |
| EcoO109I | RGGNCCY | 1 cut(s) | 467 |
| EcoRI | GAATTC | 1 cut(s) | 2140 |
| EcoRII | CCWGG | 5 cut(s) | 486, 847, 1157, 1216, 1636 |
| EcoRV | GATATC | 1 cut(s) | 2036 |
| EcoT14I | CCWWGG | 1 cut(s) | 1666 |
| ErhI | CCWWGG | 1 cut(s) | 1666 |
| Esp3I | CGTCTC | 1 cut(s) | 2161 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 622, 654, 1482, 1514 |
| FaqI | GGGAC | 5 cut(s) | 1421, 1735, 1765, 2010, 2069 |
| FauI | CCCGC | 3 cut(s) | 43, 345, 1075 |
| FauNDI | CATATG | 1 cut(s) | 1136 |
| FbaI | TGATCA | 2 cut(s) | 1414, 2104 |
| FblI | GTMKAC | 2 cut(s) | 884, 1975 |
| Fnu4HI | GCNGC | 4 cut(s) | 48, 90, 165, 784 |
| FokI | GGATG | 4 cut(s) | 257, 446, 452, 881 |
| Fsp4HI | GCNGC | 4 cut(s) | 48, 90, 165, 784 |
| FspBI | CTAG | 5 cut(s) | 383, 408, 1034, 1398, 2022 |
| FspI | TGCGCA | 1 cut(s) | 669 |
| GlaI | GCGC | 2 cut(s) | 249, 669 |
| GluI | GCNGC | 4 cut(s) | 48, 90, 165, 784 |
| GsuI | CTGGAG | 2 cut(s) | 456, 777 |
| HaeIII | GGCC | 2 cut(s) | 604, 774 |
| HapII | CCGG | 2 cut(s) | 206, 626 |
| HhaI | GCGC | 2 cut(s) | 250, 670 |
| Hin1I | GRCGYC | 1 cut(s) | 2170 |
| Hin6I | GCGC | 2 cut(s) | 248, 668 |
| HinP1I | GCGC | 2 cut(s) | 248, 668 |
| HincII | GTYRAC | 1 cut(s) | 1111 |
| HindII | GTYRAC | 1 cut(s) | 1111 |
| HindIII | AAGCTT | 3 cut(s) | 398, 636, 1496 |
| HpaII | CCGG | 2 cut(s) | 206, 626 |
| HphI | GGTGA | 5 cut(s) | 440, 455, 1105, 1478, 1541 |
| Hpy166II | GTNNAC | 6 cut(s) | 816, 885, 1021, 1088, 1111, 1976 |
| Hpy8I | GTNNAC | 6 cut(s) | 816, 885, 1021, 1088, 1111, 1976 |
| Hpy99I | CGWCG | 1 cut(s) | 1587 |
| HpyCH4III | ACNGT | 4 cut(s) | 1520, 1538, 1587, 1885 |
| HpyCH4IV | ACGT | 1 cut(s) | 2170 |
| HpyCH4V | TGCA | 6 cut(s) | 589, 692, 783, 816, 1191, 1606 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 780, 1049, 1504 |
| HpyF3I | CTNAG | 7 cut(s) | 192, 717, 1473, 1593, 1968, 2206, 2223 |
| HpySE526I | ACGT | 1 cut(s) | 2170 |
| Hsp92I | GRCGYC | 1 cut(s) | 2170 |
| HspAI | GCGC | 2 cut(s) | 248, 668 |
| Ksp22I | TGATCA | 2 cut(s) | 1414, 2104 |
| LguI | GCTCTTC | 1 cut(s) | 24 |
| LmnI | GCTCC | 3 cut(s) | 4, 758, 1449 |
| Lsp1109I | GCAGC | 1 cut(s) | 795 |
| LweI | GCATC | 3 cut(s) | 235, 1615, 1927 |
| MaeI | CTAG | 5 cut(s) | 383, 408, 1034, 1398, 2022 |
| MaeII | ACGT | 1 cut(s) | 2170 |
| MaeIII | GTNAC | 1 cut(s) | 1727 |
| MflI | RGATCY | 5 cut(s) | 379, 1181, 1357, 1394, 1430 |
| MhlI | GDGCHC | 1 cut(s) | 818 |
| MlsI | TGGCCA | 1 cut(s) | 774 |
| MluCI | AATT | 8 cut(s) | 131, 477, 646, 917, 967, 1096, 1192, 2140 |
| MluNI | TGGCCA | 1 cut(s) | 774 |
| MlyI | GAGTC | 2 cut(s) | 109, 2108 |
| MmeI | TCCRAC | 3 cut(s) | 353, 1408, 2240 |
| Mox20I | TGGCCA | 1 cut(s) | 774 |
| MroXI | GAANNNNTTC | 1 cut(s) | 930 |
| MscI | TGGCCA | 1 cut(s) | 774 |
| MseI | TTAA | 5 cut(s) | 197, 966, 1065, 1164, 1340 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1416, 1422, 1527, 1866, 1923 |
| Msp20I | TGGCCA | 1 cut(s) | 774 |
| MspA1I | CMGCKG | 1 cut(s) | 1844 |
| MspI | CCGG | 2 cut(s) | 206, 626 |
| MspR9I | CCNGG | 6 cut(s) | 488, 627, 849, 1159, 1218, 1638 |
| MvaI | CCWGG | 5 cut(s) | 488, 849, 1159, 1218, 1638 |
| MvnI | CGCG | 1 cut(s) | 250 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 780, 1049, 1504 |
| NciI | CCSGG | 1 cut(s) | 627 |
| NcoI | CCATGG | 1 cut(s) | 1666 |
| NdeI | CATATG | 1 cut(s) | 1136 |
| NlaIV | GGNNCC | 2 cut(s) | 1409, 1451 |
| NmeAIII | GCCGAG | 1 cut(s) | 1537 |
| NmuCI | GTSAC | 1 cut(s) | 1727 |
| NsbI | TGCGCA | 1 cut(s) | 669 |
| NspI | RCATGY | 2 cut(s) | 838, 1511 |
| PaeI | GCATGC | 1 cut(s) | 1511 |
| PagI | TCATGA | 2 cut(s) | 1522, 1861 |
| PceI | AGGCCT | 1 cut(s) | 604 |
| PciI | ACATGT | 1 cut(s) | 834 |
| PciSI | GCTCTTC | 1 cut(s) | 24 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 558 |
| PdmI | GAANNNNTTC | 1 cut(s) | 930 |
| PfoI | TCCNGGA | 2 cut(s) | 625, 1636 |
| PkrI | GCNGC | 4 cut(s) | 49, 91, 166, 785 |
| PleI | GAGTC | 2 cut(s) | 108, 2107 |
| PpsI | GAGTC | 2 cut(s) | 108, 2107 |
| PpuMI | RGGWCCY | 1 cut(s) | 467 |
| PscI | ACATGT | 1 cut(s) | 834 |
| PshBI | ATTAAT | 1 cut(s) | 1065 |
| Psp5II | RGGWCCY | 1 cut(s) | 467 |
| Psp6I | CCWGG | 5 cut(s) | 486, 847, 1157, 1216, 1636 |
| PspGI | CCWGG | 5 cut(s) | 486, 847, 1157, 1216, 1636 |
| PspN4I | GGNNCC | 2 cut(s) | 1409, 1451 |
| PspPI | GGNCC | 3 cut(s) | 467, 845, 1408 |
| PspPPI | RGGWCCY | 1 cut(s) | 467 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1889, 2102 |
| PsuI | RGATCY | 5 cut(s) | 379, 1181, 1357, 1394, 1430 |
| PvuII | CAGCTG | 1 cut(s) | 1844 |
| RsaI | GTAC | 3 cut(s) | 702, 1148, 1767 |
| RsaNI | GTAC | 3 cut(s) | 701, 1147, 1766 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1416, 1422, 1527, 1866, 1923 |
| SapI | GCTCTTC | 1 cut(s) | 24 |
| SaqAI | TTAA | 5 cut(s) | 197, 966, 1065, 1164, 1340 |
| SatI | GCNGC | 4 cut(s) | 48, 90, 165, 784 |
| Sau96I | GGNCC | 3 cut(s) | 467, 845, 1408 |
| SchI | GAGTC | 2 cut(s) | 109, 2108 |
| ScrFI | CCNGG | 6 cut(s) | 488, 627, 849, 1159, 1218, 1638 |
| SduI | GDGCHC | 1 cut(s) | 818 |
| SfaNI | GCATC | 3 cut(s) | 235, 1615, 1927 |
| SfcI | CTRYAG | 1 cut(s) | 1024 |
| SinI | GGWCC | 3 cut(s) | 467, 845, 1408 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1416, 1422, 1527, 1866, 1923 |
| SmlI | CTYRAG | 4 cut(s) | 401, 878, 1117, 1939 |
| SmoI | CTYRAG | 4 cut(s) | 401, 878, 1117, 1939 |
| SpeI | ACTAGT | 1 cut(s) | 2021 |
| SphI | GCATGC | 1 cut(s) | 1511 |
| Sse9I | AATT | 8 cut(s) | 131, 477, 646, 917, 967, 1096, 1192, 2140 |
| SseBI | AGGCCT | 1 cut(s) | 604 |
| SspMI | CTAG | 5 cut(s) | 383, 408, 1034, 1398, 2022 |
| StuI | AGGCCT | 1 cut(s) | 604 |
| StyD4I | CCNGG | 6 cut(s) | 486, 625, 847, 1157, 1216, 1636 |
| StyI | CCWWGG | 1 cut(s) | 1666 |
| TaaI | ACNGT | 4 cut(s) | 1520, 1538, 1587, 1885 |
| TaiI | ACGT | 1 cut(s) | 2173 |
| TaqI | TCGA | 6 cut(s) | 459, 552, 1072, 1403, 1913, 1921 |
| TasI | AATT | 8 cut(s) | 131, 477, 646, 917, 967, 1096, 1192, 2140 |
| TatI | WGTACW | 2 cut(s) | 1146, 1765 |
| TauI | GCSGC | 3 cut(s) | 50, 92, 167 |
| Tru1I | TTAA | 5 cut(s) | 197, 966, 1065, 1164, 1340 |
| Tru9I | TTAA | 5 cut(s) | 197, 966, 1065, 1164, 1340 |
| TscAI | CASTG | 1 cut(s) | 2274 |
| TseFI | GTSAC | 1 cut(s) | 1727 |
| TseI | GCWGC | 1 cut(s) | 783 |
| Tsp45I | GTSAC | 1 cut(s) | 1727 |
| TspGWI | ACGGA | 1 cut(s) | 2209 |
| TspRI | CASTG | 1 cut(s) | 2274 |
| VneI | GTGCAC | 1 cut(s) | 814 |
| VpaK11BI | GGWCC | 3 cut(s) | 467, 845, 1408 |
| VspI | ATTAAT | 1 cut(s) | 1065 |
| XapI | RAATTY | 2 cut(s) | 917, 2140 |
| XbaI | TCTAGA | 2 cut(s) | 382, 1397 |
| XceI | RCATGY | 2 cut(s) | 838, 1511 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 752, 1064 |
| XmiI | GTMKAC | 2 cut(s) | 884, 1975 |
| XmnI | GAANNNNTTC | 1 cut(s) | 930 |
| XspI | CTAG | 5 cut(s) | 383, 408, 1034, 1398, 2022 |
| ZraI | GACGTC | 1 cut(s) | 2171 |