Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000557

Physical Location & Seq

Genomic Coordinates Forward (+)

31458803 .. 31491722

Gene Structure 32920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG178700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGGAGACAAAGAGGGAGACAGAGACGTTCAGCCTAAAACGGAGGAGGGGATGAGCCGGAAGGAGAAGAGGAAAGCCATGAAGAAGATGAAGCGGAAGCAGACGCGGAAGGAATTCGCTCTCAACATGGAGCAAGAGGAGACCAAGAGGTATGAGAGTACATGTTCCCGTGGTAGGACAGGCAATTTTATCCACTGTTTCCACAATCCTGGTGGAGACTATGAATGGGCTGATAGTGATAGACCACCCCAAAAATATTGGGTGGAAAAGATGGTTGCATTATTTGGTTATTCTGATGCATACGAGAAACAGATGATGAAGGATAAATCTGGACAGCTGAGGAACTCTAGCAAGAAGTCAATGACGGATTCACAGAGGAGAAGTTCAGGACACAAGAGGAAAGCGGGATATGCAGATAATCACAAGGACCGTAAGAGTAAAGCTCATGATTCAGATGGAGAGTGGTCAGACAGCAACAGGAAAGGTGATGGGCCCCATACAATAAGGAAAAGCTTGGTGCATATTGGCAATGCTTCTAATAGCTTAAAGCAACAGGAAAGTTCCGCCAGGTATTGTACTGCTGAAATGAGTGAAGAAATGTTGGACAAAGATGCAGAAAAAGACTCTAGTCATGCTAGCAAACGATCAAAGCATTGGGATAAAGTGGCAAATAAATCAGATGGTGATCGAGCCCTGGCACAAGATCTGAAACACAATAGGGGTCATTTGAGTTTAAAGATAAAGGAAGCAGATTCTCCTGTTAAAATTTTGAAATCGTATGGAACCCCTGCGCCCTGCATTTTGGATCAAGATAATACGAGATGTGCCACTGATGTGCAGATTGACAAACAGGATCGCTGGGAACCTGAACCTGGTTGCGTGGAAAAACATAATTCTGAAGGAAAGGCAGGAAGTTCGGAAAGCCATGAATCTCGTCGGGCGGGTCAATACAAAGGAAGGGATGAATCAAGTGAGTTTGAATCTAAATTGTACTATGATGATAAAGTTGGCAAGGCAGAACATTATGAATCTGGAGATGTAACTAGTTCAAAACACTGTAAGTCCAGGAGACAATCTGCAAACAGCAATGGTGAACGTGACAGTGGAAAAAGATCACAAGGTAGCAGCCAATCAGGGTACAGGAGGCACTCCAATAGCTCTGATGAGGTGACGGATTCTTCTGAAGAAAACAAAGAATCTAGAAGGAGACGCAATAAGCACCATGCGAGCCATAGATCTGGCGATCGCAAACGTCATCGTAAGAAAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030628 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

423

Amino Acids

48.38

Weight (kDa)

9.43

Isoelectric Point (pI)

66.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10320 AT1G10320
fragaria_vesca	FvH4_1g01270 FvH4_5g28020
malus_domestica	MD05G1262900.v1.1 MD05G1263000.v1.1 MD15G1442200.v1.1 MD15G1442300.v1.1
prunus_persica	Prupe.1G585000_v2.0.a1
pyrus_communis	pycom05g24740 pycom15g39000
rosa_chinensis	RchiOBHm_Chr1g0376021 RchiOBHm_Chr2g0152801 RchiOBHm_Chr6g0272511 RchiOBHm_Chr6g0272531 RchiOBHm_Chr6g0289931 RchiOBHm_Chr6g0289941 RchiOBHm_Chr6g0302241 RchiOBHm_Chr7g0221381 RchiOBHm_Chr7g0221391 RchiOBHm_Chr7g0221411
rosa_laevigata	RLG00000000942 RLG00000002158 RLG00000013669 RLG00000013670
rosa_multiflora	Rmu_co8352637.1_g000001 Rmu_co8463189.1_g000001 Rmu_sc0000092.1_g000005 Rmu_sc0001575.1_g000019 Rmu_sc0001579.1_g000007 Rmu_sc0002847.1_g000017 Rmu_sc0009283.1_g000001 Rmu_sc0018146.1_g000002 Rmu_sc0026927.1_g000002 Rmu_sc0026927.1_g000003 Rmu_sc0031601.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238370 Rroxscaffold_5G00353980 Rroxscaffold_6G00399580 Rroxscaffold_7G00181850 Rroxscaffold_7G00196190 Rroxscaffold_7G00212980
rosa_rugosa	Rorug02G0202700 Rorug06G0053300 Rorug06G0073400 Rorug06G0208900 Rorug07G0202300 Rorug07G0202300 Rorug07G0202300
rosa_samantha	Rh1AG059200 Rh1AG066100 Rh1AG285800 Rh3AG222700 Rh3DG354600 Rh5BG508200 Rh5BG539300 Rh5BG541200 Rh5CG264600 Rh5CG531900 Rh5CG562800 Rh5CG563900 Rh5DG285300 Rh6AG094100 Rh6AG186000 Rh6AG186100 Rh6AG254700 Rh6BG189200 Rh6BG258000 Rh6CG186900 Rh6CG187000 Rh6DG178300 Rh6DG178700 Rh6DG349500 Rh7AG341800 Rh7AG341900 Rh7AG458600 Rh7BG332500 Rh7CG359600 Rh7DG340200 Rh7DG340300
rosa_wichuraiana	Rw2G036370 Rw6G016030 Rw7G029050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	106
AciI	CCGC	5 cut(s)	94, 106, 404, 564, 941
AclWI	GGATC	2 cut(s)	813, 861
AcsI	RAATTY	2 cut(s)	113, 765
AcuI	CTGAAG	2 cut(s)	918, 1203
AfaI	GTAC	4 cut(s)	160, 577, 992, 1139
AfiI	CCNNNNNNNGG	2 cut(s)	174, 872
AflIII	ACRYGT	1 cut(s)	161
AgsI	TTSAA	3 cut(s)	772, 980, 1050
AhlI	ACTAGT	1 cut(s)	1043
AjnI	CCWGG	5 cut(s)	208, 566, 693, 871, 1064
AleI	CACNNNNGTG	1 cut(s)	833
AluBI	AGCT	5 cut(s)	337, 443, 513, 543, 1158
AluI	AGCT	5 cut(s)	337, 443, 513, 543, 1158
Alw26I	GTCTC	6 cut(s)	12, 18, 134, 210, 1063, 1201
AlwI	GGATC	2 cut(s)	813, 861
AoxI	GGCC	1 cut(s)	491
ApaI	GGGCCC	1 cut(s)	495
ApeKI	GCWGC	1 cut(s)	1125
ApoI	RAATTY	2 cut(s)	113, 765
AsiSI	GCGATCGC	1 cut(s)	1246
Asp700I	GAANNNNTTC	1 cut(s)	113
AspLEI	GCGC	1 cut(s)	793
AspS9I	GGNCC	3 cut(s)	427, 491, 492
AsuHPI	GGTGA	4 cut(s)	497, 695, 1103, 1180
AsuNHI	GCTAGC	1 cut(s)	635
AvaII	GGWCC	1 cut(s)	427
BaeGI	GKGCMC	1 cut(s)	495
BanII	GRGCYC	2 cut(s)	495, 694
BbvCI	CCTCAGC	1 cut(s)	338
BbvI	GCAGC	1 cut(s)	1137
BccI	CCATC	4 cut(s)	265, 449, 482, 674
BcgI	CGANNNNNNTGC	2 cut(s)	897, 931
BciT130I	CCWGG	5 cut(s)	210, 568, 695, 873, 1066
BcoDI	GTCTC	6 cut(s)	12, 18, 134, 210, 1063, 1201
BcuI	ACTAGT	1 cut(s)	1043
BfaI	CTAG	5 cut(s)	348, 627, 636, 1044, 1200
BglII	AGATCT	2 cut(s)	703, 1235
BisI	GCNGC	1 cut(s)	1126
BlsI	GCNGC	1 cut(s)	1127
Bme1390I	CCNGG	5 cut(s)	210, 568, 695, 873, 1066
Bme18I	GGWCC	1 cut(s)	427
BmgT120I	GGNCC	3 cut(s)	427, 491, 492
BmiI	GGNNCC	4 cut(s)	493, 494, 784, 864
BmrFI	CCNGG	5 cut(s)	210, 568, 695, 873, 1066
BmsI	GCATC	2 cut(s)	286, 601
BmtI	GCTAGC	1 cut(s)	639
BoxI	GACNNNNGTC	1 cut(s)	627
BplI	GAGNNNNNCTC	2 cut(s)	427, 459
BpmI	CTGGAG	1 cut(s)	1053
Bpu10I	CCTNAGC	1 cut(s)	338
BsaBI	GATNNNNATC	1 cut(s)	684
BsaI	GGTCTC	1 cut(s)	134
BsaJI	CCNNGG	2 cut(s)	169, 693
Bsc4I	CCNNNNNNNGG	2 cut(s)	174, 872
Bse3DI	GCAATG	2 cut(s)	535, 1093
Bse8I	GATNNNNATC	1 cut(s)	684
BseBI	CCWGG	5 cut(s)	210, 568, 695, 873, 1066
BseDI	CCNNGG	2 cut(s)	169, 693
BseGI	GGATG	2 cut(s)	57, 967
BseJI	GATNNNNATC	1 cut(s)	684
BseLI	CCNNNNNNNGG	2 cut(s)	174, 872
BseMI	GCAATG	2 cut(s)	535, 1093
BseMII	CTCAG	1 cut(s)	329
BseRI	GAGGAG	3 cut(s)	59, 152, 391
BseSI	GKGCMC	1 cut(s)	495
BseXI	GCAGC	1 cut(s)	1137
BseYI	CCCAGC	1 cut(s)	858
BsgI	GTGCAG	1 cut(s)	857
Bsh1236I	CGCG	1 cut(s)	106
Bsh1285I	CGRYCG	1 cut(s)	1246
BshFI	GGCC	1 cut(s)	493
BsiEI	CGRYCG	1 cut(s)	1246
BsiSI	CCGG	1 cut(s)	58
BslI	CCNNNNNNNGG	2 cut(s)	174, 872
BsmAI	GTCTC	6 cut(s)	12, 18, 134, 210, 1063, 1201
BsmBI	CGTCTC	2 cut(s)	18, 1201
BsnI	GGCC	1 cut(s)	493
Bso31I	GGTCTC	1 cut(s)	134
Bsp120I	GGGCCC	1 cut(s)	491
Bsp1286I	GDGCHC	2 cut(s)	495, 694
Bsp143I	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
BspACI	CCGC	5 cut(s)	94, 106, 404, 564, 941
BspANI	GGCC	1 cut(s)	493
BspCNI	CTCAG	1 cut(s)	330
BspFNI	CGCG	1 cut(s)	106
BspHI	TCATGA	1 cut(s)	445
BspLI	GGNNCC	4 cut(s)	493, 494, 784, 864
BspOI	GCTAGC	1 cut(s)	639
BspPI	GGATC	2 cut(s)	813, 861
BspTNI	GGTCTC	1 cut(s)	134
BsrDI	GCAATG	2 cut(s)	535, 1093
BssECI	CCNNGG	2 cut(s)	169, 693
BssMI	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
Bst2UI	CCWGG	5 cut(s)	210, 568, 695, 873, 1066
Bst4CI	ACNGT	4 cut(s)	197, 431, 1058, 1103
Bst6I	CTCTTC	1 cut(s)	62
BstC8I	GCNNGC	2 cut(s)	637, 1228
BstDEI	CTNAG	1 cut(s)	338
BstDSI	CCRYGG	1 cut(s)	169
BstF5I	GGATG	2 cut(s)	57, 967
BstFNI	CGCG	1 cut(s)	106
BstHHI	GCGC	1 cut(s)	793
BstKTI	GATC	8 cut(s)	647, 688, 706, 808, 856, 1115, 1238, 1246
BstMAI	GTCTC	6 cut(s)	12, 18, 134, 210, 1063, 1201
BstMBI	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
BstMCI	CGRYCG	1 cut(s)	1246
BstMWI	GCNNNNNNNGC	1 cut(s)	410
BstNI	CCWGG	5 cut(s)	210, 568, 695, 873, 1066
BstNSI	RCATGY	1 cut(s)	165
BstPAI	GACNNNNGTC	1 cut(s)	627
BstSCI	CCNGG	5 cut(s)	208, 566, 693, 871, 1064
BstSLI	GKGCMC	1 cut(s)	495
BstUI	CGCG	1 cut(s)	106
BstV1I	GCAGC	1 cut(s)	1137
BstX2I	RGATCY	2 cut(s)	703, 1235
BstXI	CCANNNNNNTGG	2 cut(s)	209, 1238
BstYI	RGATCY	2 cut(s)	703, 1235
BsuRI	GGCC	1 cut(s)	493
BtgI	CCRYGG	1 cut(s)	169
BtsCI	GGATG	2 cut(s)	57, 967
BtsIMutI	CAGTG	4 cut(s)	193, 828, 1054, 1108
Cac8I	GCNNGC	2 cut(s)	637, 1228
CciI	TCATGA	1 cut(s)	445
CfoI	GCGC	1 cut(s)	793
Cfr13I	GGNCC	3 cut(s)	427, 491, 492
CseI	GACGC	2 cut(s)	112, 1218
CsiI	ACCWGGT	1 cut(s)	871
Csp6I	GTAC	4 cut(s)	159, 576, 991, 1138
CspCI	CAANNNNNGTGG	2 cut(s)	193, 228
CviAII	CATG	7 cut(s)	79, 127, 162, 446, 632, 926, 1223
CviQI	GTAC	4 cut(s)	159, 576, 991, 1138
DdeI	CTNAG	1 cut(s)	338
DpnI	GATC	8 cut(s)	646, 687, 705, 807, 855, 1114, 1237, 1245
DpnII	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
DraI	TTTAAA	1 cut(s)	735
Eam1104I	CTCTTC	1 cut(s)	62
EarI	CTCTTC	1 cut(s)	62
EciI	GGCGGA	1 cut(s)	553
Eco24I	GRGCYC	2 cut(s)	495, 694
Eco31I	GGTCTC	1 cut(s)	134
Eco47I	GGWCC	1 cut(s)	427
Eco57I	CTGAAG	2 cut(s)	918, 1203
EcoO109I	RGGNCCY	1 cut(s)	492
EcoRI	GAATTC	1 cut(s)	113
EcoRII	CCWGG	5 cut(s)	208, 566, 693, 871, 1064
EcoT22I	ATGCAT	1 cut(s)	301
EcoT38I	GRGCYC	2 cut(s)	495, 694
Esp3I	CGTCTC	2 cut(s)	18, 1201
FaeI	CATG	7 cut(s)	82, 130, 165, 449, 635, 929, 1226
FatI	CATG	7 cut(s)	78, 126, 161, 445, 631, 925, 1222
FauI	CCCGC	2 cut(s)	397, 934
Fnu4HI	GCNGC	1 cut(s)	1126
FokI	GGATG	2 cut(s)	64, 974
FriOI	GRGCYC	2 cut(s)	495, 694
Fsp4HI	GCNGC	1 cut(s)	1126
FspBI	CTAG	5 cut(s)	348, 627, 636, 1044, 1200
GlaI	GCGC	1 cut(s)	792
GluI	GCNGC	1 cut(s)	1126
GsaI	CCCAGC	1 cut(s)	862
GsuI	CTGGAG	1 cut(s)	1053
HaeIII	GGCC	1 cut(s)	493
HapII	CCGG	1 cut(s)	58
HgaI	GACGC	2 cut(s)	112, 1218
HhaI	GCGC	1 cut(s)	793
Hin1II	CATG	7 cut(s)	82, 130, 165, 449, 635, 929, 1226
Hin6I	GCGC	1 cut(s)	791
HinP1I	GCGC	1 cut(s)	791
HindIII	AAGCTT	1 cut(s)	511
HpaII	CCGG	1 cut(s)	58
HphI	GGTGA	4 cut(s)	497, 695, 1103, 1180
Hpy166II	GTNNAC	1 cut(s)	1094
Hpy188I	TCNGA	9 cut(s)	295, 454, 469, 679, 708, 898, 919, 1162, 1183
Hpy188III	TCNNGA	6 cut(s)	330, 387, 446, 809, 1032, 1200
Hpy8I	GTNNAC	1 cut(s)	1094
Hpy99I	CGWCG	1 cut(s)	939
HpyAV	CCTTC	6 cut(s)	55, 103, 313, 893, 951, 1197
HpyCH4III	ACNGT	4 cut(s)	197, 431, 1058, 1103
HpyCH4IV	ACGT	3 cut(s)	27, 1096, 1252
HpyCH4V	TGCA	8 cut(s)	278, 299, 413, 520, 614, 798, 838, 1079
HpyF10VI	GCNNNNNNNGC	1 cut(s)	410
HpyF3I	CTNAG	1 cut(s)	338
HpySE526I	ACGT	3 cut(s)	27, 1096, 1252
Hsp92II	CATG	7 cut(s)	82, 130, 165, 449, 635, 929, 1226
HspAI	GCGC	1 cut(s)	791
Kzo9I	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
LmnI	GCTCC	1 cut(s)	130
Lsp1109I	GCAGC	1 cut(s)	1137
LweI	GCATC	2 cut(s)	286, 601
MabI	ACCWGGT	1 cut(s)	871
MaeI	CTAG	5 cut(s)	348, 627, 636, 1044, 1200
MaeII	ACGT	3 cut(s)	27, 1096, 1252
MaeIII	GTNAC	3 cut(s)	1039, 1097, 1168
MalI	GATC	8 cut(s)	646, 687, 705, 807, 855, 1114, 1237, 1245
MboI	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
MboII	GAAGA	6 cut(s)	79, 94, 97, 605, 1170, 1196
MflI	RGATCY	2 cut(s)	703, 1235
MhlI	GDGCHC	2 cut(s)	495, 694
MluCI	AATT	6 cut(s)	113, 184, 765, 892, 986, 1267
MlyI	GAGTC	1 cut(s)	617
MmeI	TCCRAC	1 cut(s)	582
Mph1103I	ATGCAT	1 cut(s)	301
MroXI	GAANNNNTTC	1 cut(s)	113
MseI	TTAA	3 cut(s)	545, 734, 762
MslI	CAYNNNNRTG	1 cut(s)	833
MspA1I	CMGCKG	1 cut(s)	337
MspI	CCGG	1 cut(s)	58
MspR9I	CCNGG	5 cut(s)	210, 568, 695, 873, 1066
MvaI	CCWGG	5 cut(s)	210, 568, 695, 873, 1066
MvnI	CGCG	1 cut(s)	106
MwoI	GCNNNNNNNGC	1 cut(s)	410
NdeII	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
NheI	GCTAGC	1 cut(s)	635
NlaIII	CATG	7 cut(s)	82, 130, 165, 449, 635, 929, 1226
NlaIV	GGNNCC	4 cut(s)	493, 494, 784, 864
NmuCI	GTSAC	2 cut(s)	1097, 1168
NsiI	ATGCAT	1 cut(s)	301
NspI	RCATGY	1 cut(s)	165
OliI	CACNNNNGTG	1 cut(s)	833
PagI	TCATGA	1 cut(s)	445
PciI	ACATGT	1 cut(s)	161
PdmI	GAANNNNTTC	1 cut(s)	113
PfeI	GAWTC	9 cut(s)	368, 449, 752, 929, 965, 980, 1028, 1175, 1196
PfoI	TCCNGGA	1 cut(s)	1064
PkrI	GCNGC	1 cut(s)	1127
Ple19I	CGATCG	1 cut(s)	1246
PleI	GAGTC	1 cut(s)	617
PpsI	GAGTC	1 cut(s)	617
PscI	ACATGT	1 cut(s)	161
PshAI	GACNNNNGTC	1 cut(s)	627
Psp6I	CCWGG	5 cut(s)	208, 566, 693, 871, 1064
PspFI	CCCAGC	1 cut(s)	858
PspGI	CCWGG	5 cut(s)	208, 566, 693, 871, 1064
PspN4I	GGNNCC	4 cut(s)	493, 494, 784, 864
PspOMI	GGGCCC	1 cut(s)	491
PspPI	GGNCC	3 cut(s)	427, 491, 492
PsuI	RGATCY	2 cut(s)	703, 1235
PvuI	CGATCG	1 cut(s)	1246
PvuII	CAGCTG	1 cut(s)	337
RgaI	GCGATCGC	1 cut(s)	1246
RsaI	GTAC	4 cut(s)	160, 577, 992, 1139
RsaNI	GTAC	4 cut(s)	159, 576, 991, 1138
RseI	CAYNNNNRTG	1 cut(s)	833
SaqAI	TTAA	3 cut(s)	545, 734, 762
SatI	GCNGC	1 cut(s)	1126
Sau3AI	GATC	8 cut(s)	644, 685, 703, 805, 853, 1112, 1235, 1243
Sau96I	GGNCC	3 cut(s)	427, 491, 492
SchI	GAGTC	1 cut(s)	617
ScrFI	CCNGG	5 cut(s)	210, 568, 695, 873, 1066
SduI	GDGCHC	2 cut(s)	495, 694
SexAI	ACCWGGT	1 cut(s)	871
SfaAI	GCGATCGC	1 cut(s)	1246
SfaNI	GCATC	2 cut(s)	286, 601
SgfI	GCGATCGC	1 cut(s)	1246
SinI	GGWCC	1 cut(s)	427
SmiMI	CAYNNNNRTG	1 cut(s)	833
SpeI	ACTAGT	1 cut(s)	1043
Sse9I	AATT	6 cut(s)	113, 184, 765, 892, 986, 1267
SsiI	CCGC	5 cut(s)	94, 106, 404, 564, 941
SspI	AATATT	1 cut(s)	257
SspMI	CTAG	5 cut(s)	348, 627, 636, 1044, 1200
StyD4I	CCNGG	5 cut(s)	208, 566, 693, 871, 1064
TaaI	ACNGT	4 cut(s)	197, 431, 1058, 1103
TaiI	ACGT	3 cut(s)	30, 1099, 1255
TaqI	TCGA	1 cut(s)	688
TasI	AATT	6 cut(s)	113, 184, 765, 892, 986, 1267
TatI	WGTACW	3 cut(s)	158, 575, 990
TfiI	GAWTC	9 cut(s)	368, 449, 752, 929, 965, 980, 1028, 1175, 1196
Tru1I	TTAA	3 cut(s)	545, 734, 762
Tru9I	TTAA	3 cut(s)	545, 734, 762
TscAI	CASTG	4 cut(s)	200, 835, 1061, 1108
TseFI	GTSAC	2 cut(s)	1097, 1168
TseI	GCWGC	1 cut(s)	1125
Tsp45I	GTSAC	2 cut(s)	1097, 1168
TspDTI	ATGAA	7 cut(s)	95, 104, 237, 332, 942, 978, 1041
TspGWI	ACGGA	3 cut(s)	56, 380, 1187
TspRI	CASTG	4 cut(s)	200, 835, 1061, 1108
VpaK11BI	GGWCC	1 cut(s)	427
XapI	RAATTY	2 cut(s)	113, 765
XbaI	TCTAGA	1 cut(s)	1199
XceI	RCATGY	1 cut(s)	165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	209
XmnI	GAANNNNTTC	1 cut(s)	113
XspI	CTAG	5 cut(s)	348, 627, 636, 1044, 1200
Zsp2I	ATGCAT	1 cut(s)	301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.