zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 74 |
| AatII | GACGTC | 1 cut(s) | 8 |
| AccB1I | GGYRCC | 1 cut(s) | 461 |
| AciI | CCGC | 2 cut(s) | 190, 1035 |
| AcoI | YGGCCR | 1 cut(s) | 466 |
| AcuI | CTGAAG | 1 cut(s) | 465 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 2 cut(s) | 143, 1048 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 120, 162 |
| AflIII | ACRYGT | 1 cut(s) | 149 |
| AgsI | TTSAA | 5 cut(s) | 42, 505, 514, 545, 685 |
| AjnI | CCWGG | 3 cut(s) | 196, 722, 1037 |
| AluBI | AGCT | 5 cut(s) | 325, 732, 914, 984, 1014 |
| AluI | AGCT | 5 cut(s) | 325, 732, 914, 984, 1014 |
| Alw26I | GTCTC | 3 cut(s) | 198, 630, 816 |
| AoxI | GGCC | 1 cut(s) | 466 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 509 |
| AspLEI | GCGC | 1 cut(s) | 620 |
| AsuHPI | GGTGA | 3 cut(s) | 497, 785, 968 |
| AsuNHI | GCTAGC | 1 cut(s) | 1106 |
| BaeGI | GKGCMC | 1 cut(s) | 464 |
| BanI | GGYRCC | 1 cut(s) | 461 |
| BanII | GRGCYC | 1 cut(s) | 966 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 125, 157 |
| BbvCI | CCTCAGC | 1 cut(s) | 326 |
| BccI | CCATC | 8 cut(s) | 96, 253, 298, 389, 545, 566, 665, 920 |
| BciT130I | CCWGG | 3 cut(s) | 198, 724, 1039 |
| BcoDI | GTCTC | 3 cut(s) | 198, 630, 816 |
| BfaI | CTAG | 7 cut(s) | 336, 384, 390, 423, 819, 1098, 1107 |
| BfmI | CTRYAG | 1 cut(s) | 844 |
| BglII | AGATCT | 1 cut(s) | 380 |
| Bme1390I | CCNGG | 3 cut(s) | 198, 724, 1039 |
| BmiI | GGNNCC | 1 cut(s) | 463 |
| BmrFI | CCNGG | 3 cut(s) | 198, 724, 1039 |
| BmrI | ACTGGG | 1 cut(s) | 1135 |
| BmsI | GCATC | 3 cut(s) | 274, 769, 1072 |
| BmtI | GCTAGC | 1 cut(s) | 1110 |
| BmuI | ACTGGG | 1 cut(s) | 1135 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1098 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 299, 331, 898, 930 |
| Bpu10I | CCTNAGC | 1 cut(s) | 326 |
| BpuEI | CTTGAG | 2 cut(s) | 391, 718 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 630 |
| BsaJI | CCNNGG | 2 cut(s) | 157, 598 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 120, 162 |
| Bse118I | RCCGGY | 1 cut(s) | 464 |
| Bse1I | ACTGG | 2 cut(s) | 421, 1130 |
| Bse3DI | GCAATG | 1 cut(s) | 1006 |
| BseBI | CCWGG | 3 cut(s) | 198, 724, 1039 |
| BseDI | CCNNGG | 2 cut(s) | 157, 598 |
| BseGI | GGATG | 1 cut(s) | 577 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 120, 162 |
| BseMI | GCAATG | 1 cut(s) | 1006 |
| BseMII | CTCAG | 2 cut(s) | 317, 699 |
| BseNI | ACTGG | 2 cut(s) | 421, 1130 |
| BseSI | GKGCMC | 1 cut(s) | 464 |
| BshFI | GGCC | 1 cut(s) | 468 |
| BshNI | GGYRCC | 1 cut(s) | 461 |
| BsiSI | CCGG | 1 cut(s) | 465 |
| BslFI | GGGAC | 1 cut(s) | 705 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 120, 162 |
| BsmAI | GTCTC | 3 cut(s) | 198, 630, 816 |
| BsmFI | GGGAC | 1 cut(s) | 705 |
| BsnI | GGCC | 1 cut(s) | 468 |
| Bso31I | GGTCTC | 1 cut(s) | 630 |
| Bsp1286I | GDGCHC | 2 cut(s) | 464, 966 |
| Bsp143I | GATC | 2 cut(s) | 380, 1115 |
| Bsp19I | CCATGG | 1 cut(s) | 598 |
| BspACI | CCGC | 2 cut(s) | 190, 1035 |
| BspANI | GGCC | 1 cut(s) | 468 |
| BspCNI | CTCAG | 2 cut(s) | 318, 700 |
| BspHI | TCATGA | 3 cut(s) | 763, 793, 916 |
| BspLI | GGNNCC | 1 cut(s) | 463 |
| BspMAI | CTGCAG | 1 cut(s) | 848 |
| BspOI | GCTAGC | 1 cut(s) | 1110 |
| BspT107I | GGYRCC | 1 cut(s) | 461 |
| BspTNI | GGTCTC | 1 cut(s) | 630 |
| BsrDI | GCAATG | 1 cut(s) | 1006 |
| BsrFI | RCCGGY | 1 cut(s) | 464 |
| BsrI | ACTGG | 2 cut(s) | 421, 1130 |
| BssAI | RCCGGY | 1 cut(s) | 464 |
| BssECI | CCNNGG | 2 cut(s) | 157, 598 |
| BssMI | GATC | 2 cut(s) | 380, 1115 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 1 cut(s) | 598 |
| Bst2UI | CCWGG | 3 cut(s) | 198, 724, 1039 |
| Bst4CI | ACNGT | 2 cut(s) | 185, 773 |
| Bst6I | CTCTTC | 2 cut(s) | 483, 680 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 2 cut(s) | 51, 1108 |
| BstDEI | CTNAG | 2 cut(s) | 326, 708 |
| BstDSI | CCRYGG | 2 cut(s) | 157, 598 |
| BstF5I | GGATG | 1 cut(s) | 577 |
| BstHHI | GCGC | 1 cut(s) | 620 |
| BstKTI | GATC | 2 cut(s) | 383, 1118 |
| BstMAI | GTCTC | 3 cut(s) | 198, 630, 816 |
| BstMBI | GATC | 2 cut(s) | 380, 1115 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 881 |
| BstNI | CCWGG | 3 cut(s) | 198, 724, 1039 |
| BstNSI | RCATGY | 2 cut(s) | 153, 171 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1098 |
| BstSCI | CCNGG | 3 cut(s) | 196, 722, 1037 |
| BstSFI | CTRYAG | 1 cut(s) | 844 |
| BstSLI | GKGCMC | 1 cut(s) | 464 |
| BstX2I | RGATCY | 1 cut(s) | 380 |
| BstYI | RGATCY | 1 cut(s) | 380 |
| BsuRI | GGCC | 1 cut(s) | 468 |
| BtgI | CCRYGG | 2 cut(s) | 157, 598 |
| BtsCI | GGATG | 1 cut(s) | 577 |
| BtsIMutI | CAGTG | 2 cut(s) | 181, 1123 |
| Cac8I | GCNNGC | 2 cut(s) | 51, 1108 |
| CciI | TCATGA | 3 cut(s) | 763, 793, 916 |
| CfoI | GCGC | 1 cut(s) | 620 |
| Cfr10I | RCCGGY | 1 cut(s) | 464 |
| Csp6I | GTAC | 2 cut(s) | 142, 1047 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 181, 216 |
| CviQI | GTAC | 2 cut(s) | 142, 1047 |
| DdeI | CTNAG | 2 cut(s) | 326, 708 |
| DpnI | GATC | 2 cut(s) | 382, 1117 |
| DpnII | GATC | 2 cut(s) | 380, 1115 |
| EaeI | YGGCCR | 1 cut(s) | 466 |
| Eam1104I | CTCTTC | 2 cut(s) | 483, 680 |
| EarI | CTCTTC | 2 cut(s) | 483, 680 |
| EciI | GGCGGA | 1 cut(s) | 1024 |
| Eco130I | CCWWGG | 1 cut(s) | 598 |
| Eco24I | GRGCYC | 1 cut(s) | 966 |
| Eco31I | GGTCTC | 1 cut(s) | 630 |
| Eco57I | CTGAAG | 1 cut(s) | 465 |
| EcoRII | CCWGG | 3 cut(s) | 196, 722, 1037 |
| EcoT14I | CCWWGG | 1 cut(s) | 598 |
| EcoT22I | ATGCAT | 1 cut(s) | 289 |
| EcoT38I | GRGCYC | 1 cut(s) | 966 |
| ErhI | CCWWGG | 1 cut(s) | 598 |
| FaqI | GGGAC | 1 cut(s) | 705 |
| FauNDI | CATATG | 2 cut(s) | 116, 567 |
| FokI | GGATG | 1 cut(s) | 584 |
| FriOI | GRGCYC | 1 cut(s) | 966 |
| FspBI | CTAG | 7 cut(s) | 336, 384, 390, 423, 819, 1098, 1107 |
| GlaI | GCGC | 1 cut(s) | 619 |
| HaeIII | GGCC | 1 cut(s) | 468 |
| HapII | CCGG | 1 cut(s) | 465 |
| HhaI | GCGC | 1 cut(s) | 620 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 1 cut(s) | 618 |
| HinP1I | GCGC | 1 cut(s) | 618 |
| HincII | GTYRAC | 1 cut(s) | 816 |
| HindII | GTYRAC | 1 cut(s) | 816 |
| HindIII | AAGCTT | 1 cut(s) | 982 |
| HinfI | GANTC | 6 cut(s) | 356, 545, 665, 830, 920, 1094 |
| HpaII | CCGG | 1 cut(s) | 465 |
| HphI | GGTGA | 3 cut(s) | 497, 785, 968 |
| Hpy166II | GTNNAC | 1 cut(s) | 816 |
| Hpy188I | TCNGA | 6 cut(s) | 283, 456, 550, 670, 925, 940 |
| Hpy188III | TCNNGA | 6 cut(s) | 318, 390, 764, 794, 858, 917 |
| Hpy8I | GTNNAC | 1 cut(s) | 816 |
| Hpy99I | CGWCG | 1 cut(s) | 747 |
| HpyAV | CCTTC | 6 cut(s) | 26, 100, 451, 489, 499, 603 |
| HpyCH4III | ACNGT | 2 cut(s) | 185, 773 |
| HpyCH4IV | ACGT | 2 cut(s) | 5, 901 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 881 |
| HpyF3I | CTNAG | 2 cut(s) | 326, 708 |
| HpySE526I | ACGT | 2 cut(s) | 5, 901 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 1 cut(s) | 618 |
| Kzo9I | GATC | 2 cut(s) | 380, 1115 |
| LmnI | GCTCC | 1 cut(s) | 457 |
| LweI | GCATC | 3 cut(s) | 274, 769, 1072 |
| MaeI | CTAG | 7 cut(s) | 336, 384, 390, 423, 819, 1098, 1107 |
| MaeII | ACGT | 2 cut(s) | 5, 901 |
| MaeIII | GTNAC | 4 cut(s) | 80, 94, 602, 703 |
| MalI | GATC | 2 cut(s) | 382, 1117 |
| MboI | GATC | 2 cut(s) | 380, 1115 |
| MboII | GAAGA | 5 cut(s) | 441, 500, 535, 697, 1076 |
| MflI | RGATCY | 1 cut(s) | 380 |
| MhlI | GDGCHC | 2 cut(s) | 464, 966 |
| MluCI | AATT | 3 cut(s) | 172, 557, 1055 |
| MlyI | GAGTC | 1 cut(s) | 1088 |
| MmeI | TCCRAC | 2 cut(s) | 918, 1053 |
| MnlI | CCTC | 8 cut(s) | 23, 39, 132, 301, 321, 357, 681, 861 |
| Mph1103I | ATGCAT | 1 cut(s) | 289 |
| MroXI | GAANNNNTTC | 1 cut(s) | 509 |
| MseI | TTAA | 1 cut(s) | 1016 |
| MslI | CAYNNNNRTG | 3 cut(s) | 28, 92, 570 |
| MspA1I | CMGCKG | 1 cut(s) | 325 |
| MspI | CCGG | 1 cut(s) | 465 |
| MspR9I | CCNGG | 3 cut(s) | 198, 724, 1039 |
| MvaI | CCWGG | 3 cut(s) | 198, 724, 1039 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 881 |
| NcoI | CCATGG | 1 cut(s) | 598 |
| NdeI | CATATG | 2 cut(s) | 116, 567 |
| NdeII | GATC | 2 cut(s) | 380, 1115 |
| NheI | GCTAGC | 1 cut(s) | 1106 |
| NlaIV | GGNNCC | 1 cut(s) | 463 |
| NmuCI | GTSAC | 3 cut(s) | 80, 94, 602 |
| NsiI | ATGCAT | 1 cut(s) | 289 |
| NspI | RCATGY | 2 cut(s) | 153, 171 |
| PagI | TCATGA | 3 cut(s) | 763, 793, 916 |
| PciI | ACATGT | 1 cut(s) | 149 |
| PdmI | GAANNNNTTC | 1 cut(s) | 509 |
| PfeI | GAWTC | 5 cut(s) | 356, 545, 665, 830, 920 |
| PleI | GAGTC | 1 cut(s) | 1088 |
| PpsI | GAGTC | 1 cut(s) | 1088 |
| PscI | ACATGT | 1 cut(s) | 149 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1098 |
| PsiI | TTATAA | 1 cut(s) | 74 |
| Psp6I | CCWGG | 3 cut(s) | 196, 722, 1037 |
| PspGI | CCWGG | 3 cut(s) | 196, 722, 1037 |
| PspN4I | GGNNCC | 1 cut(s) | 463 |
| PstI | CTGCAG | 1 cut(s) | 848 |
| PsuI | RGATCY | 1 cut(s) | 380 |
| PvuII | CAGCTG | 1 cut(s) | 325 |
| RsaI | GTAC | 2 cut(s) | 143, 1048 |
| RsaNI | GTAC | 2 cut(s) | 142, 1047 |
| RseI | CAYNNNNRTG | 3 cut(s) | 28, 92, 570 |
| SaqAI | TTAA | 1 cut(s) | 1016 |
| Sau3AI | GATC | 2 cut(s) | 380, 1115 |
| SchI | GAGTC | 1 cut(s) | 1088 |
| ScrFI | CCNGG | 3 cut(s) | 198, 724, 1039 |
| SduI | GDGCHC | 2 cut(s) | 464, 966 |
| SfaNI | GCATC | 3 cut(s) | 274, 769, 1072 |
| SfcI | CTRYAG | 1 cut(s) | 844 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 28, 92, 570 |
| SmlI | CTYRAG | 2 cut(s) | 406, 733 |
| SmoI | CTYRAG | 2 cut(s) | 406, 733 |
| Sse9I | AATT | 3 cut(s) | 172, 557, 1055 |
| SsiI | CCGC | 2 cut(s) | 190, 1035 |
| SspI | AATATT | 1 cut(s) | 245 |
| SspMI | CTAG | 7 cut(s) | 336, 384, 390, 423, 819, 1098, 1107 |
| StyD4I | CCNGG | 3 cut(s) | 196, 722, 1037 |
| StyI | CCWWGG | 1 cut(s) | 598 |
| TaaI | ACNGT | 2 cut(s) | 185, 773 |
| TaiI | ACGT | 2 cut(s) | 8, 904 |
| TaqI | TCGA | 1 cut(s) | 137 |
| TasI | AATT | 3 cut(s) | 172, 557, 1055 |
| TatI | WGTACW | 1 cut(s) | 1046 |
| TfiI | GAWTC | 5 cut(s) | 356, 545, 665, 830, 920 |
| Tru1I | TTAA | 1 cut(s) | 1016 |
| Tru9I | TTAA | 1 cut(s) | 1016 |
| TscAI | CASTG | 2 cut(s) | 188, 1130 |
| TseFI | GTSAC | 3 cut(s) | 80, 94, 602 |
| Tsp45I | GTSAC | 3 cut(s) | 80, 94, 602 |
| TspDTI | ATGAA | 6 cut(s) | 76, 225, 456, 672, 782, 810 |
| TspGWI | ACGGA | 3 cut(s) | 368, 596, 648 |
| TspRI | CASTG | 2 cut(s) | 188, 1130 |
| XbaI | TCTAGA | 1 cut(s) | 389 |
| XceI | RCATGY | 2 cut(s) | 153, 171 |
| XmnI | GAANNNNTTC | 1 cut(s) | 509 |
| XspI | CTAG | 7 cut(s) | 336, 384, 390, 423, 819, 1098, 1107 |
| ZraI | GACGTC | 1 cut(s) | 6 |
| Zsp2I | ATGCAT | 1 cut(s) | 289 |