zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 353 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 951 |
| AccI | GTMKAC | 1 cut(s) | 276 |
| AccIII | TCCGGA | 1 cut(s) | 244 |
| AciI | CCGC | 7 cut(s) | 99, 300, 398, 827, 1052, 1196, 1220 |
| AclWI | GGATC | 1 cut(s) | 516 |
| AcoI | YGGCCR | 3 cut(s) | 691, 870, 942 |
| AcsI | RAATTY | 1 cut(s) | 662 |
| AcuI | CTGAAG | 1 cut(s) | 749 |
| AfaI | GTAC | 6 cut(s) | 573, 673, 855, 1147, 1210, 1218 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 326, 814, 951, 1101 |
| AjnI | CCWGG | 3 cut(s) | 311, 400, 960 |
| AjuI | GAANNNNNNNTTGG | 5 cut(s) | 37, 938, 970, 1010, 1042 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 500, 532 |
| AluBI | AGCT | 8 cut(s) | 89, 410, 433, 454, 801, 859, 925, 1187 |
| AluI | AGCT | 8 cut(s) | 89, 410, 433, 454, 801, 859, 925, 1187 |
| Alw21I | GWGCWC | 1 cut(s) | 435 |
| AlwI | GGATC | 1 cut(s) | 516 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 862, 1055 |
| Ama87I | CYCGRG | 1 cut(s) | 899 |
| Aor13HI | TCCGGA | 1 cut(s) | 244 |
| AoxI | GGCC | 5 cut(s) | 691, 736, 818, 870, 942 |
| ApeKI | GCWGC | 1 cut(s) | 485 |
| ApoI | RAATTY | 1 cut(s) | 662 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1031, 1063 |
| AspS9I | GGNCC | 6 cut(s) | 818, 968, 1030, 1104, 1134, 1172 |
| AsuC2I | CCSGG | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 949 |
| AsuII | TTCGAA | 1 cut(s) | 121 |
| AsuNHI | GCTAGC | 1 cut(s) | 925 |
| AvaI | CYCGRG | 1 cut(s) | 899 |
| AvaII | GGWCC | 5 cut(s) | 968, 1030, 1104, 1134, 1172 |
| BaeGI | GKGCMC | 1 cut(s) | 900 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1200, 1233 |
| BalI | TGGCCA | 3 cut(s) | 693, 872, 944 |
| BanII | GRGCYC | 1 cut(s) | 435 |
| BbsI | GAAGAC | 1 cut(s) | 349 |
| Bbv12I | GWGCWC | 1 cut(s) | 435 |
| BbvCI | CCTCAGC | 1 cut(s) | 440 |
| BbvI | GCAGC | 1 cut(s) | 472 |
| BccI | CCATC | 1 cut(s) | 1163 |
| BceAI | ACGGC | 1 cut(s) | 751 |
| BciT130I | CCWGG | 3 cut(s) | 313, 402, 962 |
| BclI | TGATCA | 2 cut(s) | 76, 987 |
| BcnI | CCSGG | 1 cut(s) | 96 |
| BfaI | CTAG | 4 cut(s) | 560, 612, 926, 1184 |
| BisI | GCNGC | 4 cut(s) | 100, 301, 486, 1053 |
| BlsI | GCNGC | 4 cut(s) | 101, 302, 487, 1054 |
| BmcAI | AGTACT | 1 cut(s) | 1147 |
| Bme1390I | CCNGG | 4 cut(s) | 96, 313, 402, 962 |
| Bme18I | GGWCC | 5 cut(s) | 968, 1030, 1104, 1134, 1172 |
| BmeT110I | CYCGRG | 1 cut(s) | 899 |
| BmgT120I | GGNCC | 6 cut(s) | 818, 968, 1030, 1104, 1134, 1172 |
| BmiI | GGNNCC | 3 cut(s) | 310, 317, 819 |
| BmrFI | CCNGG | 4 cut(s) | 96, 313, 402, 962 |
| BmsI | GCATC | 1 cut(s) | 707 |
| BmtI | GCTAGC | 1 cut(s) | 929 |
| BpiI | GAAGAC | 1 cut(s) | 349 |
| BpmI | CTGGAG | 1 cut(s) | 615 |
| Bpu10I | CCTNAGC | 2 cut(s) | 440, 921 |
| Bpu14I | TTCGAA | 1 cut(s) | 121 |
| BpuEI | CTTGAG | 1 cut(s) | 1161 |
| BpuMI | CCSGG | 1 cut(s) | 96 |
| Bsa29I | ATCGAT | 1 cut(s) | 418 |
| BsaJI | CCNNGG | 3 cut(s) | 322, 546, 960 |
| BsaWI | WCCGGW | 3 cut(s) | 244, 513, 668 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 650, 680 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 326, 814, 951, 1101 |
| Bse1I | ACTGG | 4 cut(s) | 808, 913, 945, 956 |
| BseAI | TCCGGA | 1 cut(s) | 244 |
| BseBI | CCWGG | 3 cut(s) | 313, 402, 962 |
| BseCI | ATCGAT | 1 cut(s) | 418 |
| BseDI | CCNNGG | 3 cut(s) | 322, 546, 960 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 326, 814, 951, 1101 |
| BseMII | CTCAG | 1 cut(s) | 454 |
| BseNI | ACTGG | 4 cut(s) | 808, 913, 945, 956 |
| BseRI | GAGGAG | 1 cut(s) | 1172 |
| BseSI | GKGCMC | 1 cut(s) | 900 |
| BseXI | GCAGC | 1 cut(s) | 472 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BshFI | GGCC | 5 cut(s) | 693, 738, 820, 872, 944 |
| BshVI | ATCGAT | 1 cut(s) | 418 |
| BsiHKAI | GWGCWC | 1 cut(s) | 435 |
| BsiHKCI | CYCGRG | 1 cut(s) | 899 |
| BsiSI | CCGG | 4 cut(s) | 95, 245, 514, 669 |
| BslFI | GGGAC | 2 cut(s) | 380, 1077 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 326, 814, 951, 1101 |
| BsmFI | GGGAC | 2 cut(s) | 380, 1077 |
| BsnI | GGCC | 5 cut(s) | 693, 738, 820, 872, 944 |
| BsoBI | CYCGRG | 1 cut(s) | 899 |
| Bsp119I | TTCGAA | 1 cut(s) | 121 |
| Bsp1286I | GDGCHC | 2 cut(s) | 435, 900 |
| Bsp13I | TCCGGA | 1 cut(s) | 244 |
| Bsp1407I | TGTACA | 1 cut(s) | 853 |
| Bsp143I | GATC | 4 cut(s) | 76, 260, 508, 987 |
| BspACI | CCGC | 7 cut(s) | 99, 300, 398, 827, 1052, 1196, 1220 |
| BspANI | GGCC | 5 cut(s) | 693, 738, 820, 872, 944 |
| BspCNI | CTCAG | 1 cut(s) | 453 |
| BspDI | ATCGAT | 1 cut(s) | 418 |
| BspEI | TCCGGA | 1 cut(s) | 244 |
| BspLI | GGNNCC | 3 cut(s) | 310, 317, 819 |
| BspOI | GCTAGC | 1 cut(s) | 929 |
| BspPI | GGATC | 1 cut(s) | 516 |
| BspT104I | TTCGAA | 1 cut(s) | 121 |
| BsrGI | TGTACA | 1 cut(s) | 853 |
| BsrI | ACTGG | 4 cut(s) | 808, 913, 945, 956 |
| BssECI | CCNNGG | 3 cut(s) | 322, 546, 960 |
| BssMI | GATC | 4 cut(s) | 76, 260, 508, 987 |
| Bst2UI | CCWGG | 3 cut(s) | 313, 402, 962 |
| Bst4CI | ACNGT | 3 cut(s) | 394, 550, 787 |
| Bst6I | CTCTTC | 3 cut(s) | 581, 728, 1144 |
| BstAUI | TGTACA | 1 cut(s) | 853 |
| BstBI | TTCGAA | 1 cut(s) | 121 |
| BstC8I | GCNNGC | 2 cut(s) | 109, 927 |
| BstDEI | CTNAG | 2 cut(s) | 440, 921 |
| BstDSI | CCRYGG | 1 cut(s) | 546 |
| BstKTI | GATC | 4 cut(s) | 79, 263, 511, 990 |
| BstMBI | GATC | 4 cut(s) | 76, 260, 508, 987 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 108, 826, 1061 |
| BstNI | CCWGG | 3 cut(s) | 313, 402, 962 |
| BstSCI | CCNGG | 4 cut(s) | 94, 311, 400, 960 |
| BstSLI | GKGCMC | 1 cut(s) | 900 |
| BstV1I | GCAGC | 1 cut(s) | 472 |
| BstV2I | GAAGAC | 1 cut(s) | 349 |
| BstX2I | RGATCY | 1 cut(s) | 508 |
| BstYI | RGATCY | 1 cut(s) | 508 |
| Bsu15I | ATCGAT | 1 cut(s) | 418 |
| BsuRI | GGCC | 5 cut(s) | 693, 738, 820, 872, 944 |
| BsuTUI | ATCGAT | 1 cut(s) | 418 |
| BtgI | CCRYGG | 1 cut(s) | 546 |
| BtsI | GCAGTG | 1 cut(s) | 900 |
| BtsIMutI | CAGTG | 2 cut(s) | 900, 938 |
| Cac8I | GCNNGC | 2 cut(s) | 109, 927 |
| CaiI | CAGNNNCTG | 2 cut(s) | 862, 1055 |
| Cfr13I | GGNCC | 6 cut(s) | 818, 968, 1030, 1104, 1134, 1172 |
| ClaI | ATCGAT | 1 cut(s) | 418 |
| Csp6I | GTAC | 6 cut(s) | 572, 672, 854, 1146, 1209, 1217 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 772, 807 |
| CviAII | CATG | 3 cut(s) | 74, 192, 365 |
| CviQI | GTAC | 6 cut(s) | 572, 672, 854, 1146, 1209, 1217 |
| DdeI | CTNAG | 2 cut(s) | 440, 921 |
| DpnI | GATC | 4 cut(s) | 78, 262, 510, 989 |
| DpnII | GATC | 4 cut(s) | 76, 260, 508, 987 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 353 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 353 |
| EaeI | YGGCCR | 3 cut(s) | 691, 870, 942 |
| Eam1104I | CTCTTC | 3 cut(s) | 581, 728, 1144 |
| EarI | CTCTTC | 3 cut(s) | 581, 728, 1144 |
| Ecl136II | GAGCTC | 1 cut(s) | 433 |
| Eco24I | GRGCYC | 1 cut(s) | 435 |
| Eco32I | GATATC | 1 cut(s) | 1009 |
| Eco47I | GGWCC | 5 cut(s) | 968, 1030, 1104, 1134, 1172 |
| Eco53kI | GAGCTC | 1 cut(s) | 433 |
| Eco57I | CTGAAG | 1 cut(s) | 749 |
| Eco88I | CYCGRG | 1 cut(s) | 899 |
| EcoICRI | GAGCTC | 1 cut(s) | 433 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1104, 1134 |
| EcoRII | CCWGG | 3 cut(s) | 311, 400, 960 |
| EcoRV | GATATC | 1 cut(s) | 1009 |
| EcoT38I | GRGCYC | 1 cut(s) | 435 |
| FaeI | CATG | 3 cut(s) | 77, 195, 368 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 987, 1019, 1123, 1155 |
| FaqI | GGGAC | 2 cut(s) | 380, 1077 |
| FatI | CATG | 3 cut(s) | 73, 191, 364 |
| FauI | CCCGC | 2 cut(s) | 405, 1203 |
| FbaI | TGATCA | 2 cut(s) | 76, 987 |
| FblI | GTMKAC | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 4 cut(s) | 100, 301, 486, 1053 |
| FriOI | GRGCYC | 1 cut(s) | 435 |
| Fsp4HI | GCNGC | 4 cut(s) | 100, 301, 486, 1053 |
| FspBI | CTAG | 4 cut(s) | 560, 612, 926, 1184 |
| GluI | GCNGC | 4 cut(s) | 100, 301, 486, 1053 |
| GsuI | CTGGAG | 1 cut(s) | 615 |
| HaeIII | GGCC | 5 cut(s) | 693, 738, 820, 872, 944 |
| HapII | CCGG | 4 cut(s) | 95, 245, 514, 669 |
| Hin1II | CATG | 3 cut(s) | 77, 195, 368 |
| HincII | GTYRAC | 2 cut(s) | 277, 813 |
| HindII | GTYRAC | 2 cut(s) | 277, 813 |
| HinfI | GANTC | 8 cut(s) | 139, 180, 273, 420, 607, 628, 902, 1039 |
| HpaI | GTTAAC | 1 cut(s) | 813 |
| HpaII | CCGG | 4 cut(s) | 95, 245, 514, 669 |
| HphI | GGTGA | 1 cut(s) | 949 |
| Hpy166II | GTNNAC | 5 cut(s) | 277, 752, 783, 813, 957 |
| Hpy188I | TCNGA | 5 cut(s) | 864, 968, 1038, 1044, 1168 |
| Hpy188III | TCNNGA | 5 cut(s) | 163, 245, 727, 991, 1004 |
| Hpy8I | GTNNAC | 5 cut(s) | 277, 752, 783, 813, 957 |
| HpyAV | CCTTC | 4 cut(s) | 139, 552, 1043, 1125 |
| HpyCH4III | ACNGT | 3 cut(s) | 394, 550, 787 |
| HpyCH4IV | ACGT | 1 cut(s) | 564 |
| HpyCH4V | TGCA | 6 cut(s) | 70, 107, 213, 236, 368, 1023 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 108, 826, 1061 |
| HpyF3I | CTNAG | 2 cut(s) | 440, 921 |
| HpySE526I | ACGT | 1 cut(s) | 564 |
| Hsp92II | CATG | 3 cut(s) | 77, 195, 368 |
| Kpn2I | TCCGGA | 1 cut(s) | 244 |
| Ksp22I | TGATCA | 2 cut(s) | 76, 987 |
| KspAI | GTTAAC | 1 cut(s) | 813 |
| Kzo9I | GATC | 4 cut(s) | 76, 260, 508, 987 |
| LmnI | GCTCC | 2 cut(s) | 321, 1192 |
| Lsp1109I | GCAGC | 1 cut(s) | 472 |
| LweI | GCATC | 1 cut(s) | 707 |
| MaeI | CTAG | 4 cut(s) | 560, 612, 926, 1184 |
| MaeII | ACGT | 1 cut(s) | 564 |
| MaeIII | GTNAC | 2 cut(s) | 167, 181 |
| MalI | GATC | 4 cut(s) | 78, 262, 510, 989 |
| MboI | GATC | 4 cut(s) | 76, 260, 508, 987 |
| MboII | GAAGA | 9 cut(s) | 349, 352, 415, 568, 715, 742, 1063, 1131, 1140 |
| MflI | RGATCY | 1 cut(s) | 508 |
| MhlI | GDGCHC | 2 cut(s) | 435, 900 |
| MlsI | TGGCCA | 3 cut(s) | 693, 872, 944 |
| MluCI | AATT | 4 cut(s) | 33, 662, 932, 1066 |
| MluNI | TGGCCA | 3 cut(s) | 693, 872, 944 |
| MlyI | GAGTC | 4 cut(s) | 189, 282, 622, 911 |
| MmeI | TCCRAC | 1 cut(s) | 946 |
| Mox20I | TGGCCA | 3 cut(s) | 693, 872, 944 |
| MroI | TCCGGA | 1 cut(s) | 244 |
| MscI | TGGCCA | 3 cut(s) | 693, 872, 944 |
| MseI | TTAA | 3 cut(s) | 528, 555, 812 |
| Msp20I | TGGCCA | 3 cut(s) | 693, 872, 944 |
| MspA1I | CMGCKG | 1 cut(s) | 1052 |
| MspI | CCGG | 4 cut(s) | 95, 245, 514, 669 |
| MspR9I | CCNGG | 4 cut(s) | 96, 313, 402, 962 |
| MvaI | CCWGG | 3 cut(s) | 313, 402, 962 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 108, 826, 1061 |
| NciI | CCSGG | 1 cut(s) | 96 |
| NdeII | GATC | 4 cut(s) | 76, 260, 508, 987 |
| NheI | GCTAGC | 1 cut(s) | 925 |
| NlaIII | CATG | 3 cut(s) | 77, 195, 368 |
| NlaIV | GGNNCC | 3 cut(s) | 310, 317, 819 |
| NmuCI | GTSAC | 2 cut(s) | 167, 181 |
| NspV | TTCGAA | 1 cut(s) | 121 |
| PfeI | GAWTC | 4 cut(s) | 139, 420, 607, 1039 |
| PflFI | GACNNNGTC | 1 cut(s) | 353 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 951 |
| PkrI | GCNGC | 4 cut(s) | 101, 302, 487, 1054 |
| PleI | GAGTC | 4 cut(s) | 188, 281, 622, 910 |
| PpsI | GAGTC | 4 cut(s) | 188, 281, 622, 910 |
| PpuMI | RGGWCCY | 2 cut(s) | 1104, 1134 |
| Psp124BI | GAGCTC | 1 cut(s) | 435 |
| Psp5II | RGGWCCY | 2 cut(s) | 1104, 1134 |
| Psp6I | CCWGG | 3 cut(s) | 311, 400, 960 |
| PspGI | CCWGG | 3 cut(s) | 311, 400, 960 |
| PspN4I | GGNNCC | 3 cut(s) | 310, 317, 819 |
| PspPI | GGNCC | 6 cut(s) | 818, 968, 1030, 1104, 1134, 1172 |
| PspPPI | RGGWCCY | 2 cut(s) | 1104, 1134 |
| PstNI | CAGNNNCTG | 2 cut(s) | 862, 1055 |
| PsuI | RGATCY | 1 cut(s) | 508 |
| PsyI | GACNNNGTC | 1 cut(s) | 353 |
| RsaI | GTAC | 6 cut(s) | 573, 673, 855, 1147, 1210, 1218 |
| RsaNI | GTAC | 6 cut(s) | 572, 672, 854, 1146, 1209, 1217 |
| SacI | GAGCTC | 1 cut(s) | 435 |
| SalI | GTCGAC | 1 cut(s) | 275 |
| SaqAI | TTAA | 3 cut(s) | 528, 555, 812 |
| SatI | GCNGC | 4 cut(s) | 100, 301, 486, 1053 |
| Sau3AI | GATC | 4 cut(s) | 76, 260, 508, 987 |
| Sau96I | GGNCC | 6 cut(s) | 818, 968, 1030, 1104, 1134, 1172 |
| ScaI | AGTACT | 1 cut(s) | 1147 |
| SchI | GAGTC | 4 cut(s) | 189, 282, 622, 911 |
| ScrFI | CCNGG | 4 cut(s) | 96, 313, 402, 962 |
| SduI | GDGCHC | 2 cut(s) | 435, 900 |
| SfaNI | GCATC | 1 cut(s) | 707 |
| SfuI | TTCGAA | 1 cut(s) | 121 |
| SinI | GGWCC | 5 cut(s) | 968, 1030, 1104, 1134, 1172 |
| SmlI | CTYRAG | 1 cut(s) | 1176 |
| SmoI | CTYRAG | 1 cut(s) | 1176 |
| Sse9I | AATT | 4 cut(s) | 33, 662, 932, 1066 |
| SsiI | CCGC | 7 cut(s) | 99, 300, 398, 827, 1052, 1196, 1220 |
| SspMI | CTAG | 4 cut(s) | 560, 612, 926, 1184 |
| SstI | GAGCTC | 1 cut(s) | 435 |
| StyD4I | CCNGG | 4 cut(s) | 94, 311, 400, 960 |
| TaaI | ACNGT | 3 cut(s) | 394, 550, 787 |
| TaiI | ACGT | 1 cut(s) | 567 |
| TaqI | TCGA | 7 cut(s) | 121, 276, 336, 418, 435, 491, 626 |
| TasI | AATT | 4 cut(s) | 33, 662, 932, 1066 |
| TatI | WGTACW | 3 cut(s) | 571, 853, 1145 |
| TauI | GCSGC | 3 cut(s) | 102, 303, 1055 |
| TfiI | GAWTC | 4 cut(s) | 139, 420, 607, 1039 |
| Tru1I | TTAA | 3 cut(s) | 528, 555, 812 |
| Tru9I | TTAA | 3 cut(s) | 528, 555, 812 |
| TscAI | CASTG | 2 cut(s) | 900, 945 |
| TseFI | GTSAC | 2 cut(s) | 167, 181 |
| TseI | GCWGC | 1 cut(s) | 485 |
| Tsp45I | GTSAC | 2 cut(s) | 167, 181 |
| TspDTI | ATGAA | 1 cut(s) | 322 |
| TspRI | CASTG | 2 cut(s) | 900, 945 |
| Tth111I | GACNNNGTC | 1 cut(s) | 353 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 951 |
| VpaK11BI | GGWCC | 5 cut(s) | 968, 1030, 1104, 1134, 1172 |
| XapI | RAATTY | 1 cut(s) | 662 |
| XmiI | GTMKAC | 1 cut(s) | 276 |
| XspI | CTAG | 4 cut(s) | 560, 612, 926, 1184 |
| ZrmI | AGTACT | 1 cut(s) | 1147 |