zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 815 |
| Acc16I | TGCGCA | 1 cut(s) | 903 |
| AccB1I | GGYRCC | 1 cut(s) | 1331 |
| AciI | CCGC | 5 cut(s) | 112, 352, 554, 853, 1060 |
| AclWI | GGATC | 3 cut(s) | 77, 170, 242 |
| AcoI | YGGCCR | 1 cut(s) | 1336 |
| AcsI | RAATTY | 2 cut(s) | 817, 1604 |
| AcuI | CTGAAG | 2 cut(s) | 1335, 1667 |
| AfaI | GTAC | 7 cut(s) | 552, 689, 734, 866, 870, 875, 1013 |
| AfeI | AGCGCT | 2 cut(s) | 328, 755 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 560, 709, 852, 853, 990, 1032 |
| AflIII | ACRYGT | 2 cut(s) | 684, 1019 |
| AgsI | TTSAA | 9 cut(s) | 269, 601, 799, 823, 1375, 1498, 1510, 1526, 1746 |
| AhlI | ACTAGT | 1 cut(s) | 1253 |
| AjnI | CCWGG | 2 cut(s) | 697, 1066 |
| Alw21I | GWGCWC | 2 cut(s) | 844, 883 |
| Alw26I | GTCTC | 1 cut(s) | 1752 |
| Alw44I | GTGCAC | 2 cut(s) | 840, 879 |
| AlwI | GGATC | 3 cut(s) | 77, 170, 242 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 526 |
| Ama87I | CYCGRG | 1 cut(s) | 728 |
| Aor51HI | AGCGCT | 2 cut(s) | 328, 755 |
| AoxI | GGCC | 5 cut(s) | 210, 700, 1100, 1336, 1559 |
| ApaLI | GTGCAC | 2 cut(s) | 840, 879 |
| ApeKI | GCWGC | 6 cut(s) | 520, 523, 633, 670, 1700, 1772 |
| ApoI | RAATTY | 2 cut(s) | 817, 1604 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1751, 1783 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1255, 1680 |
| AspLEI | GCGC | 4 cut(s) | 329, 520, 756, 904 |
| AspS9I | GGNCC | 2 cut(s) | 219, 695 |
| AsuC2I | CCSGG | 2 cut(s) | 638, 653 |
| AsuHPI | GGTGA | 1 cut(s) | 1367 |
| AsuII | TTCGAA | 1 cut(s) | 283 |
| AvaI | CYCGRG | 1 cut(s) | 728 |
| AvaII | GGWCC | 2 cut(s) | 219, 695 |
| BaeGI | GKGCMC | 3 cut(s) | 844, 883, 1334 |
| BanI | GGYRCC | 1 cut(s) | 1331 |
| BanII | GRGCYC | 1 cut(s) | 729 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 995, 1027 |
| BbsI | GAAGAC | 1 cut(s) | 771 |
| Bbv12I | GWGCWC | 2 cut(s) | 844, 883 |
| BbvCI | CCTCAGC | 1 cut(s) | 1196 |
| BbvI | GCAGC | 6 cut(s) | 532, 535, 645, 657, 1712, 1784 |
| BccI | CCATC | 5 cut(s) | 32, 966, 1123, 1168, 1259 |
| BciT130I | CCWGG | 2 cut(s) | 699, 1068 |
| BcnI | CCSGG | 2 cut(s) | 638, 653 |
| BcoDI | GTCTC | 1 cut(s) | 1752 |
| BcuI | ACTAGT | 1 cut(s) | 1253 |
| BfaI | CTAG | 4 cut(s) | 1206, 1254, 1260, 1293 |
| BfoI | RGCGCY | 2 cut(s) | 330, 757 |
| BisI | GCNGC | 6 cut(s) | 521, 524, 634, 671, 1701, 1773 |
| BlsI | GCNGC | 6 cut(s) | 522, 525, 635, 672, 1702, 1774 |
| Bme1390I | CCNGG | 4 cut(s) | 638, 653, 699, 1068 |
| Bme18I | GGWCC | 2 cut(s) | 219, 695 |
| BmeT110I | CYCGRG | 1 cut(s) | 728 |
| BmgT120I | GGNCC | 2 cut(s) | 219, 695 |
| BmiI | GGNNCC | 3 cut(s) | 170, 402, 1333 |
| BmrFI | CCNGG | 4 cut(s) | 638, 653, 699, 1068 |
| BmsI | GCATC | 3 cut(s) | 515, 913, 1144 |
| BpiI | GAAGAC | 1 cut(s) | 771 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1169, 1201 |
| BpmI | CTGGAG | 2 cut(s) | 627, 905 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1196 |
| Bpu14I | TTCGAA | 1 cut(s) | 283 |
| BpuEI | CTTGAG | 2 cut(s) | 165, 1261 |
| BpuMI | CCSGG | 2 cut(s) | 638, 653 |
| Bsa29I | ATCGAT | 1 cut(s) | 1536 |
| BsaAI | YACGTR | 1 cut(s) | 868 |
| BsaBI | GATNNNNATC | 2 cut(s) | 444, 579 |
| BsaJI | CCNNGG | 2 cut(s) | 273, 1027 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 560, 709, 852, 853, 990, 1032 |
| Bse118I | RCCGGY | 1 cut(s) | 1334 |
| Bse1I | ACTGG | 2 cut(s) | 610, 888 |
| Bse3DI | GCAATG | 1 cut(s) | 628 |
| Bse8I | GATNNNNATC | 2 cut(s) | 444, 579 |
| BseBI | CCWGG | 2 cut(s) | 699, 1068 |
| BseCI | ATCGAT | 1 cut(s) | 1536 |
| BseDI | CCNNGG | 2 cut(s) | 273, 1027 |
| BseGI | GGATG | 3 cut(s) | 662, 724, 784 |
| BseJI | GATNNNNATC | 2 cut(s) | 444, 579 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 560, 709, 852, 853, 990, 1032 |
| BseMI | GCAATG | 1 cut(s) | 628 |
| BseMII | CTCAG | 1 cut(s) | 1187 |
| BseNI | ACTGG | 2 cut(s) | 610, 888 |
| BseRI | GAGGAG | 2 cut(s) | 260, 1747 |
| BseSI | GKGCMC | 3 cut(s) | 844, 883, 1334 |
| BseXI | GCAGC | 6 cut(s) | 532, 535, 645, 657, 1712, 1784 |
| BseYI | CCCAGC | 2 cut(s) | 19, 932 |
| BsgI | GTGCAG | 2 cut(s) | 1448, 1485 |
| BshFI | GGCC | 5 cut(s) | 212, 702, 1102, 1338, 1561 |
| BshNI | GGYRCC | 1 cut(s) | 1331 |
| BshVI | ATCGAT | 1 cut(s) | 1536 |
| BsiHKAI | GWGCWC | 2 cut(s) | 844, 883 |
| BsiHKCI | CYCGRG | 1 cut(s) | 728 |
| BsiSI | CCGG | 4 cut(s) | 76, 637, 653, 1335 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 560, 709, 852, 853, 990, 1032 |
| BsmAI | GTCTC | 1 cut(s) | 1752 |
| BsnI | GGCC | 5 cut(s) | 212, 702, 1102, 1338, 1561 |
| BsoBI | CYCGRG | 1 cut(s) | 728 |
| Bsp119I | TTCGAA | 1 cut(s) | 283 |
| Bsp1286I | GDGCHC | 4 cut(s) | 729, 844, 883, 1334 |
| Bsp1407I | TGTACA | 1 cut(s) | 687 |
| Bsp143I | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| Bsp19I | CCATGG | 1 cut(s) | 273 |
| BspACI | CCGC | 5 cut(s) | 112, 352, 554, 853, 1060 |
| BspANI | GGCC | 5 cut(s) | 212, 702, 1102, 1338, 1561 |
| BspCNI | CTCAG | 1 cut(s) | 1188 |
| BspDI | ATCGAT | 1 cut(s) | 1536 |
| BspLI | GGNNCC | 3 cut(s) | 170, 402, 1333 |
| BspPI | GGATC | 3 cut(s) | 77, 170, 242 |
| BspT104I | TTCGAA | 1 cut(s) | 283 |
| BspT107I | GGYRCC | 1 cut(s) | 1331 |
| BsrDI | GCAATG | 1 cut(s) | 628 |
| BsrFI | RCCGGY | 1 cut(s) | 1334 |
| BsrGI | TGTACA | 1 cut(s) | 687 |
| BsrI | ACTGG | 2 cut(s) | 610, 888 |
| BssAI | RCCGGY | 1 cut(s) | 1334 |
| BssECI | CCNNGG | 2 cut(s) | 273, 1027 |
| BssMI | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| BssT1I | CCWWGG | 1 cut(s) | 273 |
| Bst2UI | CCWGG | 2 cut(s) | 699, 1068 |
| Bst4CI | ACNGT | 4 cut(s) | 379, 873, 878, 1055 |
| Bst6I | CTCTTC | 5 cut(s) | 80, 153, 201, 303, 1353 |
| BstAUI | TGTACA | 1 cut(s) | 687 |
| BstBAI | YACGTR | 1 cut(s) | 868 |
| BstBI | TTCGAA | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 1 cut(s) | 356 |
| BstDEI | CTNAG | 1 cut(s) | 1196 |
| BstDSI | CCRYGG | 2 cut(s) | 273, 1027 |
| BstF5I | GGATG | 3 cut(s) | 662, 724, 784 |
| BstH2I | RGCGCY | 2 cut(s) | 330, 757 |
| BstHHI | GCGC | 4 cut(s) | 329, 520, 756, 904 |
| BstKTI | GATC | 6 cut(s) | 72, 178, 237, 448, 583, 1726 |
| BstMAI | GTCTC | 1 cut(s) | 1752 |
| BstMBI | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 899, 1583 |
| BstNI | CCWGG | 2 cut(s) | 699, 1068 |
| BstNSI | RCATGY | 3 cut(s) | 688, 1023, 1041 |
| BstSCI | CCNGG | 4 cut(s) | 636, 651, 697, 1066 |
| BstSLI | GKGCMC | 3 cut(s) | 844, 883, 1334 |
| BstSNI | TACGTA | 1 cut(s) | 868 |
| BstV1I | GCAGC | 6 cut(s) | 532, 535, 645, 657, 1712, 1784 |
| BstV2I | GAAGAC | 1 cut(s) | 771 |
| BstX2I | RGATCY | 1 cut(s) | 175 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1116 |
| BstYI | RGATCY | 1 cut(s) | 175 |
| Bsu15I | ATCGAT | 1 cut(s) | 1536 |
| BsuRI | GGCC | 5 cut(s) | 212, 702, 1102, 1338, 1561 |
| BsuTUI | ATCGAT | 1 cut(s) | 1536 |
| BtgI | CCRYGG | 2 cut(s) | 273, 1027 |
| BtsCI | GGATG | 3 cut(s) | 662, 724, 784 |
| BtsIMutI | CAGTG | 3 cut(s) | 881, 883, 1051 |
| Cac8I | GCNNGC | 1 cut(s) | 356 |
| CaiI | CAGNNNCTG | 1 cut(s) | 526 |
| CfoI | GCGC | 4 cut(s) | 329, 520, 756, 904 |
| Cfr10I | RCCGGY | 1 cut(s) | 1334 |
| Cfr13I | GGNCC | 2 cut(s) | 219, 695 |
| ClaI | ATCGAT | 1 cut(s) | 1536 |
| Csp6I | GTAC | 7 cut(s) | 551, 688, 733, 865, 869, 874, 1012 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1051, 1086 |
| CviAII | CATG | 7 cut(s) | 97, 149, 196, 274, 685, 1020, 1038 |
| CviQI | GTAC | 7 cut(s) | 551, 688, 733, 865, 869, 874, 1012 |
| DdeI | CTNAG | 1 cut(s) | 1196 |
| DpnI | GATC | 6 cut(s) | 71, 177, 236, 447, 582, 1725 |
| DpnII | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| EaeI | YGGCCR | 1 cut(s) | 1336 |
| Eam1104I | CTCTTC | 5 cut(s) | 80, 153, 201, 303, 1353 |
| EarI | CTCTTC | 5 cut(s) | 80, 153, 201, 303, 1353 |
| Eco105I | TACGTA | 1 cut(s) | 868 |
| Eco130I | CCWWGG | 1 cut(s) | 273 |
| Eco24I | GRGCYC | 1 cut(s) | 729 |
| Eco47I | GGWCC | 2 cut(s) | 219, 695 |
| Eco47III | AGCGCT | 2 cut(s) | 328, 755 |
| Eco57I | CTGAAG | 2 cut(s) | 1335, 1667 |
| Eco88I | CYCGRG | 1 cut(s) | 728 |
| EcoRII | CCWGG | 2 cut(s) | 697, 1066 |
| EcoT14I | CCWWGG | 1 cut(s) | 273 |
| EcoT22I | ATGCAT | 2 cut(s) | 508, 1159 |
| EcoT38I | GRGCYC | 1 cut(s) | 729 |
| ErhI | CCWWGG | 1 cut(s) | 273 |
| FaeI | CATG | 7 cut(s) | 100, 152, 199, 277, 688, 1023, 1041 |
| FatI | CATG | 7 cut(s) | 96, 148, 195, 273, 684, 1019, 1037 |
| FauI | CCCGC | 2 cut(s) | 359, 846 |
| FauNDI | CATATG | 3 cut(s) | 986, 1170, 1582 |
| Fnu4HI | GCNGC | 6 cut(s) | 521, 524, 634, 671, 1701, 1773 |
| FokI | GGATG | 3 cut(s) | 649, 731, 791 |
| FriOI | GRGCYC | 1 cut(s) | 729 |
| Fsp4HI | GCNGC | 6 cut(s) | 521, 524, 634, 671, 1701, 1773 |
| FspBI | CTAG | 4 cut(s) | 1206, 1254, 1260, 1293 |
| FspI | TGCGCA | 1 cut(s) | 903 |
| GlaI | GCGC | 4 cut(s) | 328, 519, 755, 903 |
| GluI | GCNGC | 6 cut(s) | 521, 524, 634, 671, 1701, 1773 |
| GsaI | CCCAGC | 2 cut(s) | 23, 936 |
| GsuI | CTGGAG | 2 cut(s) | 627, 905 |
| HaeII | RGCGCY | 2 cut(s) | 330, 757 |
| HaeIII | GGCC | 5 cut(s) | 212, 702, 1102, 1338, 1561 |
| HapII | CCGG | 4 cut(s) | 76, 637, 653, 1335 |
| HhaI | GCGC | 4 cut(s) | 329, 520, 756, 904 |
| Hin1II | CATG | 7 cut(s) | 100, 152, 199, 277, 688, 1023, 1041 |
| Hin6I | GCGC | 4 cut(s) | 327, 518, 754, 902 |
| HinP1I | GCGC | 4 cut(s) | 327, 518, 754, 902 |
| HincII | GTYRAC | 1 cut(s) | 1476 |
| HindII | GTYRAC | 1 cut(s) | 1476 |
| HindIII | AAGCTT | 1 cut(s) | 483 |
| HinfI | GANTC | 7 cut(s) | 280, 297, 393, 440, 533, 887, 1226 |
| HpaII | CCGG | 4 cut(s) | 76, 637, 653, 1335 |
| HphI | GGTGA | 1 cut(s) | 1367 |
| Hpy166II | GTNNAC | 4 cut(s) | 842, 865, 881, 1476 |
| Hpy188I | TCNGA | 6 cut(s) | 223, 445, 481, 806, 1153, 1326 |
| Hpy188III | TCNNGA | 7 cut(s) | 182, 332, 382, 679, 796, 1188, 1260 |
| Hpy8I | GTNNAC | 4 cut(s) | 842, 865, 881, 1476 |
| HpyAV | CCTTC | 7 cut(s) | 26, 73, 121, 970, 1321, 1359, 1369 |
| HpyCH4III | ACNGT | 4 cut(s) | 379, 873, 878, 1055 |
| HpyCH4IV | ACGT | 3 cut(s) | 316, 867, 1422 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 899, 1583 |
| HpyF3I | CTNAG | 1 cut(s) | 1196 |
| HpySE526I | ACGT | 3 cut(s) | 316, 867, 1422 |
| Hsp92II | CATG | 7 cut(s) | 100, 152, 199, 277, 688, 1023, 1041 |
| HspAI | GCGC | 4 cut(s) | 327, 518, 754, 902 |
| Kzo9I | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| LmnI | GCTCC | 6 cut(s) | 174, 199, 247, 608, 712, 1327 |
| Lsp1109I | GCAGC | 6 cut(s) | 532, 535, 645, 657, 1712, 1784 |
| LweI | GCATC | 3 cut(s) | 515, 913, 1144 |
| MaeI | CTAG | 4 cut(s) | 1206, 1254, 1260, 1293 |
| MaeII | ACGT | 3 cut(s) | 316, 867, 1422 |
| MaeIII | GTNAC | 5 cut(s) | 950, 964, 1271, 1408, 1624 |
| MalI | GATC | 6 cut(s) | 71, 177, 236, 447, 582, 1725 |
| MboI | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| MflI | RGATCY | 1 cut(s) | 175 |
| MhlI | GDGCHC | 4 cut(s) | 729, 844, 883, 1334 |
| MlyI | GAGTC | 3 cut(s) | 402, 542, 896 |
| Mph1103I | ATGCAT | 2 cut(s) | 508, 1159 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1255, 1680 |
| MseI | TTAA | 3 cut(s) | 1383, 1649, 1752 |
| MslI | CAYNNNNRTG | 1 cut(s) | 962 |
| MspA1I | CMGCKG | 2 cut(s) | 526, 1195 |
| MspI | CCGG | 4 cut(s) | 76, 637, 653, 1335 |
| MspR9I | CCNGG | 4 cut(s) | 638, 653, 699, 1068 |
| MvaI | CCWGG | 2 cut(s) | 699, 1068 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 899, 1583 |
| NciI | CCSGG | 2 cut(s) | 638, 653 |
| NcoI | CCATGG | 1 cut(s) | 273 |
| NdeI | CATATG | 3 cut(s) | 986, 1170, 1582 |
| NdeII | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| NlaIII | CATG | 7 cut(s) | 100, 152, 199, 277, 688, 1023, 1041 |
| NlaIV | GGNNCC | 3 cut(s) | 170, 402, 1333 |
| NmuCI | GTSAC | 2 cut(s) | 950, 964 |
| NsbI | TGCGCA | 1 cut(s) | 903 |
| NsiI | ATGCAT | 2 cut(s) | 508, 1159 |
| NspI | RCATGY | 3 cut(s) | 688, 1023, 1041 |
| NspV | TTCGAA | 1 cut(s) | 283 |
| PaeR7I | CTCGAG | 1 cut(s) | 728 |
| PciI | ACATGT | 2 cut(s) | 684, 1019 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1255, 1680 |
| PfeI | GAWTC | 4 cut(s) | 280, 297, 440, 1226 |
| PflFI | GACNNNGTC | 1 cut(s) | 1763 |
| PkrI | GCNGC | 6 cut(s) | 522, 525, 635, 672, 1702, 1774 |
| PleI | GAGTC | 3 cut(s) | 401, 541, 895 |
| PpsI | GAGTC | 3 cut(s) | 401, 541, 895 |
| Ppu21I | YACGTR | 1 cut(s) | 868 |
| PscI | ACATGT | 2 cut(s) | 684, 1019 |
| PsiI | TTATAA | 1 cut(s) | 815 |
| Psp6I | CCWGG | 2 cut(s) | 697, 1066 |
| PspFI | CCCAGC | 2 cut(s) | 19, 932 |
| PspGI | CCWGG | 2 cut(s) | 697, 1066 |
| PspN4I | GGNNCC | 3 cut(s) | 170, 402, 1333 |
| PspPI | GGNCC | 2 cut(s) | 219, 695 |
| PspXI | VCTCGAGB | 1 cut(s) | 728 |
| PstNI | CAGNNNCTG | 1 cut(s) | 526 |
| PsuI | RGATCY | 1 cut(s) | 175 |
| PsyI | GACNNNGTC | 1 cut(s) | 1763 |
| PvuII | CAGCTG | 2 cut(s) | 526, 1195 |
| RsaI | GTAC | 7 cut(s) | 552, 689, 734, 866, 870, 875, 1013 |
| RsaNI | GTAC | 7 cut(s) | 551, 688, 733, 865, 869, 874, 1012 |
| RseI | CAYNNNNRTG | 1 cut(s) | 962 |
| SaqAI | TTAA | 3 cut(s) | 1383, 1649, 1752 |
| SatI | GCNGC | 6 cut(s) | 521, 524, 634, 671, 1701, 1773 |
| Sau3AI | GATC | 6 cut(s) | 69, 175, 234, 445, 580, 1723 |
| Sau96I | GGNCC | 2 cut(s) | 219, 695 |
| SchI | GAGTC | 3 cut(s) | 402, 542, 896 |
| ScrFI | CCNGG | 4 cut(s) | 638, 653, 699, 1068 |
| SduI | GDGCHC | 4 cut(s) | 729, 844, 883, 1334 |
| SfaNI | GCATC | 3 cut(s) | 515, 913, 1144 |
| Sfr274I | CTCGAG | 1 cut(s) | 728 |
| SfuI | TTCGAA | 1 cut(s) | 283 |
| SinI | GGWCC | 2 cut(s) | 219, 695 |
| SlaI | CTCGAG | 1 cut(s) | 728 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 962 |
| SmlI | CTYRAG | 3 cut(s) | 180, 728, 1276 |
| SmoI | CTYRAG | 3 cut(s) | 180, 728, 1276 |
| SnaBI | TACGTA | 1 cut(s) | 868 |
| SpeI | ACTAGT | 1 cut(s) | 1253 |
| SsiI | CCGC | 5 cut(s) | 112, 352, 554, 853, 1060 |
| SspI | AATATT | 1 cut(s) | 1115 |
| SspMI | CTAG | 4 cut(s) | 1206, 1254, 1260, 1293 |
| StyD4I | CCNGG | 4 cut(s) | 636, 651, 697, 1066 |
| StyI | CCWWGG | 1 cut(s) | 273 |
| TaaI | ACNGT | 4 cut(s) | 379, 873, 878, 1055 |
| TaiI | ACGT | 3 cut(s) | 319, 870, 1425 |
| TaqI | TCGA | 7 cut(s) | 243, 283, 300, 448, 729, 1007, 1536 |
| TatI | WGTACW | 3 cut(s) | 687, 732, 873 |
| TfiI | GAWTC | 4 cut(s) | 280, 297, 440, 1226 |
| Tru1I | TTAA | 3 cut(s) | 1383, 1649, 1752 |
| Tru9I | TTAA | 3 cut(s) | 1383, 1649, 1752 |
| TscAI | CASTG | 3 cut(s) | 883, 888, 1058 |
| TseFI | GTSAC | 2 cut(s) | 950, 964 |
| TseI | GCWGC | 6 cut(s) | 520, 523, 633, 670, 1700, 1772 |
| Tsp45I | GTSAC | 2 cut(s) | 950, 964 |
| TspRI | CASTG | 3 cut(s) | 883, 888, 1058 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1763 |
| VneI | GTGCAC | 2 cut(s) | 840, 879 |
| VpaK11BI | GGWCC | 2 cut(s) | 219, 695 |
| XapI | RAATTY | 2 cut(s) | 817, 1604 |
| XbaI | TCTAGA | 1 cut(s) | 1259 |
| XceI | RCATGY | 3 cut(s) | 688, 1023, 1041 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 602 |
| XhoI | CTCGAG | 1 cut(s) | 728 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1255, 1680 |
| XspI | CTAG | 4 cut(s) | 1206, 1254, 1260, 1293 |
| Zsp2I | ATGCAT | 2 cut(s) | 508, 1159 |