Rw6G016030

zinc finger CCCH domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
31206368 .. 31214847
8480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G016030.1

Sequence Viewer

Length: 1926 bp
ATGAACGCGAAGAGATCACATCCAAAGTCCTTTCCCGAAAGGCAAGAGAAGAACCCTGTGACGAGATTGGTGCTCTCCTCGTCCACAGCGCTTGAAGAAGAAGTCAGGTCAAGGGACTACTCCGACGACTGCACCCCACGGTGCTGGCACGCCTGCGCAACCACACGCTCAAAAGAGACTGTTTGCACACCAGCTGTAACATATAGGAATTGTGCTTCTCATTTTGGAACTGAACAGGATAAAGATCATTGTCCTTTCCATTTGAAAACTGGAACTTGTCGGTTTGGTCAGCATTGCAGCAGAGTCCATTTCTACCCGGATAAATCATCCACATTGCTTCTCAAGAACATGTACAATGGTCCTGGCCTTACTTGGGAGCAGGATGAGGGGCTCGAGTACACTGATGAAGAAATTGAGCGCTGTTATGAAGAATTTTATGAGGATGTTCATACAGAGTTCTTGAAGTTTGGAGAAATTATAAATTTCAAGTACAGTGCACTGGAGTCAGCTTTGGTGGCGCATCAATCTATCAATGGTCGCTACTTTGCTGGGAAGCAGATAAGTTGTGACTTCATCAATGTGACGAGATGGAAGGTTGCCATATGTGGGAAATATGTGAAGTCGAGGTACAAGACATGTTCCCATGGTAGGACATGCAATTTTATCCACTGTTTCCGCAATCCTGGTGGAGACTATGAATGGGCTGATAGTGATAGACCACCCCAAAAATATTGGGTGGAAAAGATGGTTGCATTATTTGGTTATTCTGATGCATACGAGAAACAGATGATGAAGGATAAATCTGGGCAGCTGAGGAACTCTAAGGTTCCATTTCATGGCAGGTTTGTTGTGCAAAGATCTAGTTCTAGAGATGGGAGTTGCTCAAGTTTTACTGGTTCTAGTAGAAGATACGACAATGAAAATTATGCTCCGAAGGGCACCGGCCACCATAGACCTTCAGGTGAAGAGAACGCTTACTTGAAGGACTTCAATCACAGGAAGAACAAGAAGTATTGTATTGAATCTGATGGAGAATTGAAAAGCGCAAGACAAGAAAACGGGGACCACAAGAACAAAACCTATGAAACTGATTCCGATGGGCATTTATTGGAGAGGGGACGGAACAGGGTAACTGAGCATGGTAGCACCAGGAATAGCTCAAGCCAACGACGAAAAGCAGGAGTGCATCATGATTACGGTGATTGTGAGAAAAAAGTTCATAAAGTTGGCGGAGATTGGTCAACTAGAGACAGAGAATCATACCATGACTGCAGGAGAAGTTCAGGACACAAGAGGAAAGCGGGATATGCAGATAATCACAAGGACCGTAAGAGTAAAGCTCATGATTCAGATGGAGAGTGGTCAGACAGCAACAGGAAAGGTGATGGGCCCCATACAATAAGGAAAAGCTTGGTGCATATTGGCAATGCTTCCAATAGCTTAAATCAACAGGAAATGAGTGAAGAAATGTTGGACAAAGATGCAGAAAAAGACTCTAGTCATGCTAGCAAACGATCAAAGCACTGGGATAAAGTGGCAGATAAATCAGATGGTGATCGAGCCCTGGCACAAGATCTGAAACACAATAGGGGTCATTTGAGTTTAAAGATAAAGGAAGCAGATTCTCCTGTTAAAATTTTGAAATCGGATGAATCAAGTGAGTTTGAATCTAAATTGTACTATGATGATAAAGTTGGCAAGGCAGAACATTATGAATCTGGAGATGTAACTAGTTCAAAACACCGTAAGTCTAGGAGACAATCTGCAAACAGCAATGGTGAACGTGACAGTGGAAAAAGATCACGAGGTAGCAGCCAATCAGGGTATAGGAGGCACTCCAATAGCTCTGATGAGGTGACAGATTCTTCTGAAGAAAACAAAGAATCTAGAAGGAGAAGCAATAAGCACCATGCGAGCCATGCATAG

Protein Analysis

641

Amino Acids

73.48

Weight (kDa)

8.89

Isoelectric Point (pI)

56.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000557)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10320 AT1G10320
fragaria_vesca FvH4_1g01270 FvH4_5g28020
malus_domestica MD05G1262900.v1.1 MD05G1263000.v1.1 MD15G1442200.v1.1 MD15G1442300.v1.1
prunus_persica Prupe.1G585000_v2.0.a1
pyrus_communis pycom05g24740 pycom15g39000
rosa_chinensis RchiOBHm_Chr1g0376021 RchiOBHm_Chr2g0152801 RchiOBHm_Chr6g0272511 RchiOBHm_Chr6g0272531 RchiOBHm_Chr6g0289931 RchiOBHm_Chr6g0289941 RchiOBHm_Chr6g0302241 RchiOBHm_Chr7g0221381 RchiOBHm_Chr7g0221391 RchiOBHm_Chr7g0221411
rosa_laevigata RLG00000000942 RLG00000002158 RLG00000013669 RLG00000013670
rosa_multiflora Rmu_co8352637.1_g000001 Rmu_co8463189.1_g000001 Rmu_sc0000092.1_g000005 Rmu_sc0001575.1_g000019 Rmu_sc0001579.1_g000007 Rmu_sc0002847.1_g000017 Rmu_sc0009283.1_g000001 Rmu_sc0018146.1_g000002 Rmu_sc0026927.1_g000002 Rmu_sc0026927.1_g000003 Rmu_sc0031601.1_g000001
rosa_roxburghii Rroxscaffold_3G00238370 Rroxscaffold_5G00353980 Rroxscaffold_6G00399580 Rroxscaffold_7G00181850 Rroxscaffold_7G00196190 Rroxscaffold_7G00212980
rosa_rugosa Rorug02G0202700 Rorug06G0053300 Rorug06G0073400 Rorug06G0208900 Rorug07G0202300 Rorug07G0202300 Rorug07G0202300
rosa_samantha Rh1AG059200 Rh1AG066100 Rh1AG285800 Rh3AG222700 Rh3DG354600 Rh5BG508200 Rh5BG539300 Rh5BG541200 Rh5CG264600 Rh5CG531900 Rh5CG562800 Rh5CG563900 Rh5DG285300 Rh6AG094100 Rh6AG186000 Rh6AG186100 Rh6AG254700 Rh6BG189200 Rh6BG258000 Rh6CG186900 Rh6CG187000 Rh6DG178300 Rh6DG178700 Rh6DG349500 Rh7AG341800 Rh7AG341900 Rh7AG458600 Rh7BG332500 Rh7CG359600 Rh7DG340200 Rh7DG340300
rosa_wichuraiana Rw2G036370 Rw6G016030 Rw7G029050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 479
Acc16I TGCGCA 1 cut(s) 157
Acc36I ACCTGC 1 cut(s) 831
AccB1I GGYRCC 1 cut(s) 938
AccB7I CCANNNNNTGG 1 cut(s) 836
AccII CGCG 1 cut(s) 8
AciI CCGC 3 cut(s) 676, 1230, 1301
AcoI YGGCCR 1 cut(s) 943
AcsI RAATTY 3 cut(s) 431, 481, 1635
AcuI CTGAAG 2 cut(s) 942, 1890
AfaI GTAC 5 cut(s) 353, 398, 491, 629, 1679
AfeI AGCGCT 2 cut(s) 90, 419
AfiI CCNNNNNNNGG 4 cut(s) 373, 606, 648, 836
AflIII ACRYGT 2 cut(s) 348, 635
AhlI ACTAGT 1 cut(s) 1730
AjnI CCWGG 4 cut(s) 361, 682, 1148, 1563
AluBI AGCT 8 cut(s) 194, 509, 811, 1158, 1340, 1410, 1440, 1845
AluI AGCT 8 cut(s) 194, 509, 811, 1158, 1340, 1410, 1440, 1845
Alw21I GWGCWC 2 cut(s) 75, 499
Alw26I GTCTC 4 cut(s) 170, 684, 1242, 1750
Alw44I GTGCAC 1 cut(s) 495
Ama87I CYCGRG 1 cut(s) 392
Aor51HI AGCGCT 2 cut(s) 90, 419
AoxI GGCC 3 cut(s) 364, 943, 1388
ApaI GGGCCC 1 cut(s) 1392
ApaLI GTGCAC 1 cut(s) 495
ApeKI GCWGC 3 cut(s) 297, 808, 1812
ApoI RAATTY 3 cut(s) 431, 481, 1635
Asp700I GAANNNNTTC 1 cut(s) 986
AspLEI GCGC 5 cut(s) 91, 158, 420, 520, 1046
AspS9I GGNCC 5 cut(s) 359, 1063, 1324, 1388, 1389
AsuC2I CCSGG 1 cut(s) 317
AsuHPI GGTGA 6 cut(s) 974, 1211, 1394, 1565, 1790, 1867
AsuNHI GCTAGC 1 cut(s) 1505
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 3 cut(s) 359, 1063, 1324
BaeGI GKGCMC 3 cut(s) 499, 941, 1392
BanI GGYRCC 1 cut(s) 938
BanII GRGCYC 3 cut(s) 393, 1392, 1564
BarI GAAGNNNNNNTAC 2 cut(s) 611, 643
BauI CACGAG 1 cut(s) 1803
Bbv12I GWGCWC 2 cut(s) 75, 499
BbvCI CCTCAGC 1 cut(s) 812
BbvI GCAGC 3 cut(s) 309, 820, 1824
BccI CCATC 8 cut(s) 582, 739, 866, 1022, 1091, 1346, 1379, 1544
BcgI CGANNNNNNTGC 2 cut(s) 52, 86
BciT130I CCWGG 4 cut(s) 363, 684, 1150, 1565
BcnI CCSGG 1 cut(s) 317
BcoDI GTCTC 4 cut(s) 170, 684, 1242, 1750
BcuI ACTAGT 1 cut(s) 1730
BfaI CTAG 9 cut(s) 861, 867, 900, 1245, 1497, 1506, 1731, 1752, 1887
BfmI CTRYAG 1 cut(s) 1270
BfoI RGCGCY 2 cut(s) 92, 421
BfuAI ACCTGC 1 cut(s) 831
BglII AGATCT 2 cut(s) 857, 1573
BisI GCNGC 3 cut(s) 298, 809, 1813
BlsI GCNGC 3 cut(s) 299, 810, 1814
Bme1390I CCNGG 5 cut(s) 317, 363, 684, 1150, 1565
Bme18I GGWCC 3 cut(s) 359, 1063, 1324
BmeT110I CYCGRG 1 cut(s) 392
BmgT120I GGNCC 5 cut(s) 359, 1063, 1324, 1388, 1389
BmiI GGNNCC 5 cut(s) 828, 940, 1064, 1390, 1391
BmrFI CCNGG 5 cut(s) 317, 363, 684, 1150, 1565
BmrI ACTGGG 1 cut(s) 1534
BmsI GCATC 4 cut(s) 529, 760, 1195, 1471
BmtI GCTAGC 1 cut(s) 1509
BmuI ACTGGG 1 cut(s) 1534
BoxI GACNNNNGTC 1 cut(s) 1497
BplI GAGNNNNNCTC 2 cut(s) 1324, 1356
BpmI CTGGAG 2 cut(s) 521, 1740
Bpu10I CCTNAGC 1 cut(s) 812
BpuEI CTTGAG 3 cut(s) 326, 868, 1144
BpuMI CCSGG 1 cut(s) 317
BsaBI GATNNNNATC 2 cut(s) 243, 1554
BsaJI CCNNGG 3 cut(s) 137, 643, 1563
Bsc4I CCNNNNNNNGG 4 cut(s) 373, 606, 648, 836
Bse118I RCCGGY 1 cut(s) 941
Bse1I ACTGG 4 cut(s) 274, 504, 898, 1529
Bse3DI GCAATG 4 cut(s) 292, 332, 1432, 1780
Bse8I GATNNNNATC 2 cut(s) 243, 1554
BseBI CCWGG 4 cut(s) 363, 684, 1150, 1565
BseDI CCNNGG 3 cut(s) 137, 643, 1563
BseGI GGATG 5 cut(s) 19, 326, 388, 448, 1654
BseJI GATNNNNATC 2 cut(s) 243, 1554
BseLI CCNNNNNNNGG 4 cut(s) 373, 606, 648, 836
BseMI GCAATG 4 cut(s) 292, 332, 1432, 1780
BseMII CTCAG 2 cut(s) 803, 1125
BseNI ACTGG 4 cut(s) 274, 504, 898, 1529
BseRI GAGGAG 1 cut(s) 67
BseSI GKGCMC 3 cut(s) 499, 941, 1392
BseXI GCAGC 3 cut(s) 309, 820, 1824
BseYI CCCAGC 1 cut(s) 548
BsgI GTGCAG 1 cut(s) 115
Bsh1236I CGCG 1 cut(s) 8
BshFI GGCC 3 cut(s) 366, 945, 1390
BshNI GGYRCC 1 cut(s) 938
BsiHKAI GWGCWC 2 cut(s) 75, 499
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 2 cut(s) 317, 942
BslFI GGGAC 3 cut(s) 128, 1076, 1131
BslI CCNNNNNNNGG 4 cut(s) 373, 606, 648, 836
BsmAI GTCTC 4 cut(s) 170, 684, 1242, 1750
BsmFI GGGAC 3 cut(s) 128, 1076, 1131
BsnI GGCC 3 cut(s) 366, 945, 1390
BsoBI CYCGRG 1 cut(s) 392
Bsp120I GGGCCC 1 cut(s) 1388
Bsp1286I GDGCHC 6 cut(s) 75, 393, 499, 941, 1392, 1564
Bsp1407I TGTACA 1 cut(s) 351
Bsp143I GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
Bsp19I CCATGG 1 cut(s) 643
BspACI CCGC 3 cut(s) 676, 1230, 1301
BspANI GGCC 3 cut(s) 366, 945, 1390
BspCNI CTCAG 2 cut(s) 804, 1126
BspFNI CGCG 1 cut(s) 8
BspHI TCATGA 2 cut(s) 1189, 1342
BspLI GGNNCC 5 cut(s) 828, 940, 1064, 1390, 1391
BspMAI CTGCAG 1 cut(s) 1274
BspMI ACCTGC 1 cut(s) 831
BspOI GCTAGC 1 cut(s) 1509
BspT107I GGYRCC 1 cut(s) 938
BsrDI GCAATG 4 cut(s) 292, 332, 1432, 1780
BsrFI RCCGGY 1 cut(s) 941
BsrGI TGTACA 1 cut(s) 351
BsrI ACTGG 4 cut(s) 274, 504, 898, 1529
BssAI RCCGGY 1 cut(s) 941
BssECI CCNNGG 3 cut(s) 137, 643, 1563
BssMI GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
BssSI CACGAG 1 cut(s) 1803
BssT1I CCWWGG 1 cut(s) 643
Bst2BI CACGAG 1 cut(s) 1803
Bst2UI CCWGG 4 cut(s) 363, 684, 1150, 1565
Bst4CI ACNGT 8 cut(s) 141, 181, 494, 671, 1199, 1328, 1745, 1790
Bst6I CTCTTC 2 cut(s) 5, 960
BstAUI TGTACA 1 cut(s) 351
BstC8I GCNNGC 5 cut(s) 146, 150, 154, 1507, 1915
BstDEI CTNAG 3 cut(s) 812, 822, 1134
BstDSI CCRYGG 2 cut(s) 137, 643
BstF5I GGATG 5 cut(s) 19, 326, 388, 448, 1654
BstFNI CGCG 1 cut(s) 8
BstH2I RGCGCY 2 cut(s) 92, 421
BstHHI GCGC 5 cut(s) 91, 158, 420, 520, 1046
BstKTI GATC 7 cut(s) 17, 247, 860, 1517, 1558, 1576, 1802
BstMAI GTCTC 4 cut(s) 170, 684, 1242, 1750
BstMBI GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
BstMWI GCNNNNNNNGC 3 cut(s) 515, 1307, 1919
BstNI CCWGG 4 cut(s) 363, 684, 1150, 1565
BstNSI RCATGY 3 cut(s) 352, 639, 657
BstPAI GACNNNNGTC 1 cut(s) 1497
BstSCI CCNGG 5 cut(s) 315, 361, 682, 1148, 1563
BstSFI CTRYAG 1 cut(s) 1270
BstSLI GKGCMC 3 cut(s) 499, 941, 1392
BstUI CGCG 1 cut(s) 8
BstV1I GCAGC 3 cut(s) 309, 820, 1824
BstX2I RGATCY 2 cut(s) 857, 1573
BstXI CCANNNNNNTGG 1 cut(s) 144
BstYI RGATCY 2 cut(s) 857, 1573
BsuRI GGCC 3 cut(s) 366, 945, 1390
BtgI CCRYGG 2 cut(s) 137, 643
BtsCI GGATG 5 cut(s) 19, 326, 388, 448, 1654
BtsIMutI CAGTG 6 cut(s) 399, 497, 499, 667, 1522, 1795
BveI ACCTGC 1 cut(s) 831
Cac8I GCNNGC 5 cut(s) 146, 150, 154, 1507, 1915
CciI TCATGA 2 cut(s) 1189, 1342
CfoI GCGC 5 cut(s) 91, 158, 420, 520, 1046
Cfr10I RCCGGY 1 cut(s) 941
Cfr13I GGNCC 5 cut(s) 359, 1063, 1324, 1388, 1389
Csp6I GTAC 5 cut(s) 352, 397, 490, 628, 1678
CspCI CAANNNNNGTGG 4 cut(s) 73, 108, 667, 702
CviQI GTAC 5 cut(s) 352, 397, 490, 628, 1678
DdeI CTNAG 3 cut(s) 812, 822, 1134
DpnI GATC 7 cut(s) 16, 246, 859, 1516, 1557, 1575, 1801
DpnII GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
DraI TTTAAA 1 cut(s) 1605
EaeI YGGCCR 1 cut(s) 943
Eam1104I CTCTTC 2 cut(s) 5, 960
EarI CTCTTC 2 cut(s) 5, 960
EciI GGCGGA 1 cut(s) 1245
Eco130I CCWWGG 1 cut(s) 643
Eco24I GRGCYC 3 cut(s) 393, 1392, 1564
Eco47I GGWCC 3 cut(s) 359, 1063, 1324
Eco47III AGCGCT 2 cut(s) 90, 419
Eco57I CTGAAG 2 cut(s) 942, 1890
Eco88I CYCGRG 1 cut(s) 392
EcoO109I RGGNCCY 1 cut(s) 1389
EcoRII CCWGG 4 cut(s) 361, 682, 1148, 1563
EcoT14I CCWWGG 1 cut(s) 643
EcoT22I ATGCAT 2 cut(s) 775, 1924
EcoT38I GRGCYC 3 cut(s) 393, 1392, 1564
ErhI CCWWGG 1 cut(s) 643
FaqI GGGAC 3 cut(s) 128, 1076, 1131
FauI CCCGC 1 cut(s) 1294
FauNDI CATATG 1 cut(s) 602
Fnu4HI GCNGC 3 cut(s) 298, 809, 1813
FokI GGATG 5 cut(s) 6, 313, 395, 455, 1661
FriOI GRGCYC 3 cut(s) 393, 1392, 1564
Fsp4HI GCNGC 3 cut(s) 298, 809, 1813
FspBI CTAG 9 cut(s) 861, 867, 900, 1245, 1497, 1506, 1731, 1752, 1887
FspI TGCGCA 1 cut(s) 157
GlaI GCGC 5 cut(s) 90, 157, 419, 519, 1045
GluI GCNGC 3 cut(s) 298, 809, 1813
GsaI CCCAGC 1 cut(s) 552
GsuI CTGGAG 2 cut(s) 521, 1740
HaeII RGCGCY 2 cut(s) 92, 421
HaeIII GGCC 3 cut(s) 366, 945, 1390
HapII CCGG 2 cut(s) 317, 942
HhaI GCGC 5 cut(s) 91, 158, 420, 520, 1046
Hin6I GCGC 5 cut(s) 89, 156, 418, 518, 1044
HinP1I GCGC 5 cut(s) 89, 156, 418, 518, 1044
HincII GTYRAC 1 cut(s) 1242
HindII GTYRAC 1 cut(s) 1242
HindIII AAGCTT 1 cut(s) 1408
HpaII CCGG 2 cut(s) 317, 942
HphI GGTGA 6 cut(s) 974, 1211, 1394, 1565, 1790, 1867
Hpy166II GTNNAC 5 cut(s) 84, 399, 497, 1242, 1781
Hpy8I GTNNAC 5 cut(s) 84, 399, 497, 1242, 1781
Hpy99I CGWCG 2 cut(s) 128, 1173
HpyAV CCTTC 6 cut(s) 586, 787, 928, 966, 976, 1884
HpyCH4III ACNGT 8 cut(s) 141, 181, 494, 671, 1199, 1328, 1745, 1790
HpyCH4IV ACGT 1 cut(s) 1783
HpyF10VI GCNNNNNNNGC 3 cut(s) 515, 1307, 1919
HpyF3I CTNAG 3 cut(s) 812, 822, 1134
HpySE526I ACGT 1 cut(s) 1783
HspAI GCGC 5 cut(s) 89, 156, 418, 518, 1044
Kzo9I GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
LmnI GCTCC 2 cut(s) 376, 934
Lsp1109I GCAGC 3 cut(s) 309, 820, 1824
LweI GCATC 4 cut(s) 529, 760, 1195, 1471
MaeI CTAG 9 cut(s) 861, 867, 900, 1245, 1497, 1506, 1731, 1752, 1887
MaeII ACGT 1 cut(s) 1783
MaeIII GTNAC 8 cut(s) 58, 196, 566, 580, 1129, 1726, 1784, 1855
MalI GATC 7 cut(s) 16, 246, 859, 1516, 1557, 1575, 1801
MboI GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
MflI RGATCY 2 cut(s) 857, 1573
MhlI GDGCHC 6 cut(s) 75, 393, 499, 941, 1392, 1564
MlyI GAGTC 3 cut(s) 312, 512, 1487
MmeI TCCRAC 2 cut(s) 147, 1452
Mph1103I ATGCAT 2 cut(s) 775, 1924
MroXI GAANNNNTTC 1 cut(s) 986
MseI TTAA 3 cut(s) 1442, 1604, 1632
MslI CAYNNNNRTG 1 cut(s) 578
MspA1I CMGCKG 2 cut(s) 194, 811
MspI CCGG 2 cut(s) 317, 942
MspR9I CCNGG 5 cut(s) 317, 363, 684, 1150, 1565
MvaI CCWGG 4 cut(s) 363, 684, 1150, 1565
MvnI CGCG 1 cut(s) 8
MwoI GCNNNNNNNGC 3 cut(s) 515, 1307, 1919
NciI CCSGG 1 cut(s) 317
NcoI CCATGG 1 cut(s) 643
NdeI CATATG 1 cut(s) 602
NdeII GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
NheI GCTAGC 1 cut(s) 1505
NlaIV GGNNCC 5 cut(s) 828, 940, 1064, 1390, 1391
NmuCI GTSAC 5 cut(s) 58, 566, 580, 1784, 1855
NsbI TGCGCA 1 cut(s) 157
NsiI ATGCAT 2 cut(s) 775, 1924
NspI RCATGY 3 cut(s) 352, 639, 657
PaeR7I CTCGAG 1 cut(s) 392
PagI TCATGA 2 cut(s) 1189, 1342
PciI ACATGT 2 cut(s) 348, 635
PdmI GAANNNNTTC 1 cut(s) 986
PflMI CCANNNNNTGG 1 cut(s) 836
PkrI GCNGC 3 cut(s) 299, 810, 1814
PleI GAGTC 3 cut(s) 311, 511, 1487
PpsI GAGTC 3 cut(s) 311, 511, 1487
PscI ACATGT 2 cut(s) 348, 635
PshAI GACNNNNGTC 1 cut(s) 1497
PsiI TTATAA 1 cut(s) 479
Psp6I CCWGG 4 cut(s) 361, 682, 1148, 1563
PspFI CCCAGC 1 cut(s) 548
PspGI CCWGG 4 cut(s) 361, 682, 1148, 1563
PspN4I GGNNCC 5 cut(s) 828, 940, 1064, 1390, 1391
PspOMI GGGCCC 1 cut(s) 1388
PspPI GGNCC 5 cut(s) 359, 1063, 1324, 1388, 1389
PspXI VCTCGAGB 1 cut(s) 392
PstI CTGCAG 1 cut(s) 1274
PsuI RGATCY 2 cut(s) 857, 1573
PvuII CAGCTG 2 cut(s) 194, 811
RsaI GTAC 5 cut(s) 353, 398, 491, 629, 1679
RsaNI GTAC 5 cut(s) 352, 397, 490, 628, 1678
RseI CAYNNNNRTG 1 cut(s) 578
SaqAI TTAA 3 cut(s) 1442, 1604, 1632
SatI GCNGC 3 cut(s) 298, 809, 1813
Sau3AI GATC 7 cut(s) 14, 244, 857, 1514, 1555, 1573, 1799
Sau96I GGNCC 5 cut(s) 359, 1063, 1324, 1388, 1389
SchI GAGTC 3 cut(s) 312, 512, 1487
ScrFI CCNGG 5 cut(s) 317, 363, 684, 1150, 1565
SduI GDGCHC 6 cut(s) 75, 393, 499, 941, 1392, 1564
SfaNI GCATC 4 cut(s) 529, 760, 1195, 1471
SfcI CTRYAG 1 cut(s) 1270
Sfr274I CTCGAG 1 cut(s) 392
SinI GGWCC 3 cut(s) 359, 1063, 1324
SlaI CTCGAG 1 cut(s) 392
SmiMI CAYNNNNRTG 1 cut(s) 578
SmlI CTYRAG 4 cut(s) 341, 392, 883, 1159
SmoI CTYRAG 4 cut(s) 341, 392, 883, 1159
SpeI ACTAGT 1 cut(s) 1730
SsiI CCGC 3 cut(s) 676, 1230, 1301
SspI AATATT 1 cut(s) 731
SspMI CTAG 9 cut(s) 861, 867, 900, 1245, 1497, 1506, 1731, 1752, 1887
StyD4I CCNGG 5 cut(s) 315, 361, 682, 1148, 1563
StyI CCWWGG 1 cut(s) 643
TaaI ACNGT 8 cut(s) 141, 181, 494, 671, 1199, 1328, 1745, 1790
TaiI ACGT 1 cut(s) 1786
TaqI TCGA 3 cut(s) 393, 623, 1558
TatI WGTACW 4 cut(s) 351, 396, 489, 1677
Tru1I TTAA 3 cut(s) 1442, 1604, 1632
Tru9I TTAA 3 cut(s) 1442, 1604, 1632
TscAI CASTG 6 cut(s) 406, 499, 504, 674, 1529, 1795
TseFI GTSAC 5 cut(s) 58, 566, 580, 1784, 1855
TseI GCWGC 3 cut(s) 297, 808, 1812
Tsp45I GTSAC 5 cut(s) 58, 566, 580, 1784, 1855
TspGWI ACGGA 1 cut(s) 1135
TspRI CASTG 6 cut(s) 406, 499, 504, 674, 1529, 1795
Van91I CCANNNNNTGG 1 cut(s) 836
VneI GTGCAC 1 cut(s) 495
VpaK11BI GGWCC 3 cut(s) 359, 1063, 1324
XapI RAATTY 3 cut(s) 431, 481, 1635
XbaI TCTAGA 2 cut(s) 866, 1886
XceI RCATGY 3 cut(s) 352, 639, 657
XcmI CCANNNNNNNNNTGG 1 cut(s) 266
XhoI CTCGAG 1 cut(s) 392
XmnI GAANNNNTTC 1 cut(s) 986
XspI CTAG 9 cut(s) 861, 867, 900, 1245, 1497, 1506, 1731, 1752, 1887
Zsp2I ATGCAT 2 cut(s) 775, 1924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.