zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 890 |
| Acc36I | ACCTGC | 2 cut(s) | 427, 1006 |
| AccB1I | GGYRCC | 2 cut(s) | 1406, 2053 |
| AciI | CCGC | 5 cut(s) | 112, 352, 629, 928, 1135 |
| AclWI | GGATC | 5 cut(s) | 170, 242, 1949, 2197, 2850 |
| AcoI | YGGCCR | 1 cut(s) | 1411 |
| AcsI | RAATTY | 8 cut(s) | 842, 892, 1730, 2130, 2729, 2749, 2932, 3263 |
| AcuI | CTGAAG | 9 cut(s) | 1410, 1637, 1793, 2028, 2064, 2181, 2186, 2854, 3204 |
| AcyI | GRCGYC | 1 cut(s) | 2054 |
| AfaI | GTAC | 7 cut(s) | 627, 764, 941, 950, 1088, 2591, 2929 |
| AfeI | AGCGCT | 1 cut(s) | 830 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 635, 784, 927, 928, 1065, 1107, 2305, 2467, 2830 |
| AflII | CTTAAG | 1 cut(s) | 2744 |
| AflIII | ACRYGT | 2 cut(s) | 759, 1094 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2399 |
| AjnI | CCWGG | 5 cut(s) | 772, 1141, 2444, 2923, 2936 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3198, 3230 |
| Alw21I | GWGCWC | 8 cut(s) | 919, 958, 1923, 2602, 2652, 2995, 3085, 3177 |
| Alw26I | GTCTC | 6 cut(s) | 602, 1875, 2605, 3007, 3026, 3122 |
| Alw44I | GTGCAC | 2 cut(s) | 915, 954 |
| AlwI | GGATC | 5 cut(s) | 170, 242, 1949, 2197, 2850 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 601 |
| Ama87I | CYCGRG | 1 cut(s) | 803 |
| Aor51HI | AGCGCT | 1 cut(s) | 830 |
| AoxI | GGCC | 6 cut(s) | 775, 1175, 1411, 1685, 1978, 2705 |
| ApaLI | GTGCAC | 2 cut(s) | 915, 954 |
| ApoI | RAATTY | 8 cut(s) | 842, 892, 1730, 2130, 2729, 2749, 2932, 3263 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1874, 1906 |
| AseI | ATTAAT | 1 cut(s) | 2574 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1806 |
| AspLEI | GCGC | 5 cut(s) | 595, 831, 979, 2056, 2896 |
| AspS9I | GGNCC | 5 cut(s) | 219, 416, 770, 2458, 2705 |
| AsuC2I | CCSGG | 2 cut(s) | 713, 728 |
| AsuHPI | GGTGA | 7 cut(s) | 398, 1442, 1526, 1654, 2360, 3266, 3308 |
| AsuII | TTCGAA | 2 cut(s) | 283, 1400 |
| AsuNHI | GCTAGC | 3 cut(s) | 2023, 2252, 3193 |
| AvaI | CYCGRG | 1 cut(s) | 803 |
| AvaII | GGWCC | 4 cut(s) | 219, 416, 770, 2458 |
| BaeGI | GKGCMC | 3 cut(s) | 919, 958, 1409 |
| BanI | GGYRCC | 2 cut(s) | 1406, 2053 |
| BanII | GRGCYC | 2 cut(s) | 804, 3110 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1070, 1102, 2145, 2177 |
| BbsI | GAAGAC | 1 cut(s) | 2952 |
| Bbv12I | GWGCWC | 8 cut(s) | 919, 958, 1923, 2602, 2652, 2995, 3085, 3177 |
| BbvCI | CCTCAGC | 2 cut(s) | 1271, 2373 |
| BccI | CCATC | 9 cut(s) | 32, 377, 598, 1041, 1198, 1243, 1334, 2104, 3094 |
| BceAI | ACGGC | 1 cut(s) | 2703 |
| BciT130I | CCWGG | 5 cut(s) | 774, 1143, 2446, 2925, 2938 |
| BcnI | CCSGG | 2 cut(s) | 713, 728 |
| BcoDI | GTCTC | 6 cut(s) | 602, 1875, 2605, 3007, 3026, 3122 |
| BfmI | CTRYAG | 2 cut(s) | 2418, 3074 |
| BfoI | RGCGCY | 2 cut(s) | 832, 2057 |
| BfrI | CTTAAG | 1 cut(s) | 2744 |
| BfuAI | ACCTGC | 2 cut(s) | 427, 1006 |
| BglII | AGATCT | 2 cut(s) | 1325, 3290 |
| BmcAI | AGTACT | 1 cut(s) | 2591 |
| Bme1390I | CCNGG | 7 cut(s) | 713, 728, 774, 1143, 2446, 2925, 2938 |
| Bme18I | GGWCC | 4 cut(s) | 219, 416, 770, 2458 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2399 |
| BmeT110I | CYCGRG | 1 cut(s) | 803 |
| BmgT120I | GGNCC | 5 cut(s) | 219, 416, 770, 2458, 2705 |
| BmiI | GGNNCC | 7 cut(s) | 170, 417, 477, 1408, 2055, 2459, 2706 |
| BmrFI | CCNGG | 7 cut(s) | 713, 728, 774, 1143, 2446, 2925, 2938 |
| BmrI | ACTGGG | 1 cut(s) | 406 |
| BmsI | GCATC | 3 cut(s) | 590, 988, 1219 |
| BmtI | GCTAGC | 3 cut(s) | 2027, 2256, 3197 |
| BmuI | ACTGGG | 1 cut(s) | 406 |
| BpiI | GAAGAC | 1 cut(s) | 2952 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1244, 1276 |
| BpmI | CTGGAG | 3 cut(s) | 702, 980, 2051 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1271, 1925, 2373 |
| Bpu14I | TTCGAA | 2 cut(s) | 283, 1400 |
| BpuEI | CTTGAG | 6 cut(s) | 165, 1336, 1648, 2578, 2846, 3296 |
| BpuMI | CCSGG | 2 cut(s) | 713, 728 |
| Bsa29I | ATCGAT | 1 cut(s) | 1662 |
| BsaBI | GATNNNNATC | 2 cut(s) | 519, 654 |
| BsaHI | GRCGYC | 1 cut(s) | 2054 |
| BsaI | GGTCTC | 2 cut(s) | 2605, 3007 |
| BsaJI | CCNNGG | 8 cut(s) | 273, 1102, 1958, 2100, 2412, 2445, 2615, 2951 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2611, 2641 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 635, 784, 927, 928, 1065, 1107, 2305, 2467, 2830 |
| Bse118I | RCCGGY | 1 cut(s) | 1409 |
| Bse1I | ACTGG | 3 cut(s) | 401, 685, 963 |
| Bse3DI | GCAATG | 2 cut(s) | 703, 2529 |
| Bse8I | GATNNNNATC | 2 cut(s) | 519, 654 |
| BseBI | CCWGG | 5 cut(s) | 774, 1143, 2446, 2925, 2938 |
| BseCI | ATCGAT | 1 cut(s) | 1662 |
| BseDI | CCNNGG | 8 cut(s) | 273, 1102, 1958, 2100, 2412, 2445, 2615, 2951 |
| BseGI | GGATG | 6 cut(s) | 75, 737, 799, 859, 2020, 2096 |
| BseJI | GATNNNNATC | 2 cut(s) | 519, 654 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 635, 784, 927, 928, 1065, 1107, 2305, 2467, 2830 |
| BseMI | GCAATG | 2 cut(s) | 703, 2529 |
| BseMII | CTCAG | 5 cut(s) | 1262, 2364, 3111, 3117, 3123 |
| BseNI | ACTGG | 3 cut(s) | 401, 685, 963 |
| BseRI | GAGGAG | 6 cut(s) | 221, 260, 1873, 2248, 2843, 3260 |
| BseSI | GKGCMC | 3 cut(s) | 919, 958, 1409 |
| BseYI | CCCAGC | 2 cut(s) | 19, 1007 |
| BsgI | GTGCAG | 3 cut(s) | 1523, 1560, 3174 |
| BshFI | GGCC | 6 cut(s) | 777, 1177, 1413, 1687, 1980, 2707 |
| BshNI | GGYRCC | 2 cut(s) | 1406, 2053 |
| BshVI | ATCGAT | 1 cut(s) | 1662 |
| BsiHKAI | GWGCWC | 8 cut(s) | 919, 958, 1923, 2602, 2652, 2995, 3085, 3177 |
| BsiHKCI | CYCGRG | 1 cut(s) | 803 |
| BsiSI | CCGG | 4 cut(s) | 76, 712, 728, 1410 |
| BslFI | GGGAC | 2 cut(s) | 429, 2471 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 635, 784, 927, 928, 1065, 1107, 2305, 2467, 2830 |
| BsmAI | GTCTC | 6 cut(s) | 602, 1875, 2605, 3007, 3026, 3122 |
| BsmFI | GGGAC | 2 cut(s) | 429, 2471 |
| BsmI | GAATGC | 1 cut(s) | 3139 |
| BsnI | GGCC | 6 cut(s) | 777, 1177, 1413, 1687, 1980, 2707 |
| Bso31I | GGTCTC | 2 cut(s) | 2605, 3007 |
| BsoBI | CYCGRG | 1 cut(s) | 803 |
| Bsp119I | TTCGAA | 2 cut(s) | 283, 1400 |
| Bsp1407I | TGTACA | 2 cut(s) | 762, 939 |
| Bsp19I | CCATGG | 2 cut(s) | 273, 2100 |
| BspACI | CCGC | 5 cut(s) | 112, 352, 629, 928, 1135 |
| BspANI | GGCC | 6 cut(s) | 777, 1177, 1413, 1687, 1980, 2707 |
| BspCNI | CTCAG | 5 cut(s) | 1263, 2365, 3110, 3118, 3122 |
| BspDI | ATCGAT | 1 cut(s) | 1662 |
| BspHI | TCATGA | 1 cut(s) | 2845 |
| BspLI | GGNNCC | 7 cut(s) | 170, 417, 477, 1408, 2055, 2459, 2706 |
| BspMAI | CTGCAG | 2 cut(s) | 2422, 3078 |
| BspMI | ACCTGC | 2 cut(s) | 427, 1006 |
| BspOI | GCTAGC | 3 cut(s) | 2027, 2256, 3197 |
| BspPI | GGATC | 5 cut(s) | 170, 242, 1949, 2197, 2850 |
| BspT104I | TTCGAA | 2 cut(s) | 283, 1400 |
| BspT107I | GGYRCC | 2 cut(s) | 1406, 2053 |
| BspTI | CTTAAG | 1 cut(s) | 2744 |
| BspTNI | GGTCTC | 2 cut(s) | 2605, 3007 |
| BsrDI | GCAATG | 2 cut(s) | 703, 2529 |
| BsrFI | RCCGGY | 1 cut(s) | 1409 |
| BsrGI | TGTACA | 2 cut(s) | 762, 939 |
| BsrI | ACTGG | 3 cut(s) | 401, 685, 963 |
| BssAI | RCCGGY | 1 cut(s) | 1409 |
| BssECI | CCNNGG | 8 cut(s) | 273, 1102, 1958, 2100, 2412, 2445, 2615, 2951 |
| BssNI | GRCGYC | 1 cut(s) | 2054 |
| BssT1I | CCWWGG | 6 cut(s) | 273, 1958, 2100, 2412, 2615, 2951 |
| Bst2UI | CCWGG | 5 cut(s) | 774, 1143, 2446, 2925, 2938 |
| Bst4CI | ACNGT | 8 cut(s) | 454, 613, 948, 953, 1130, 2186, 2967, 3133 |
| Bst6I | CTCTTC | 7 cut(s) | 80, 153, 303, 405, 1428, 2445, 2580 |
| BstACI | GRCGYC | 1 cut(s) | 2054 |
| BstAFI | CTTAAG | 1 cut(s) | 2744 |
| BstAUI | TGTACA | 2 cut(s) | 762, 939 |
| BstBI | TTCGAA | 2 cut(s) | 283, 1400 |
| BstC8I | GCNNGC | 5 cut(s) | 356, 1968, 2025, 2254, 3195 |
| BstDEI | CTNAG | 7 cut(s) | 1271, 1925, 2373, 3097, 3109, 3126, 3287 |
| BstDSI | CCRYGG | 3 cut(s) | 273, 1102, 2100 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2828 |
| BstF5I | GGATG | 6 cut(s) | 75, 737, 799, 859, 2020, 2096 |
| BstH2I | RGCGCY | 2 cut(s) | 832, 2057 |
| BstHHI | GCGC | 5 cut(s) | 595, 831, 979, 2056, 2896 |
| BstMAI | GTCTC | 6 cut(s) | 602, 1875, 2605, 3007, 3026, 3122 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 974, 1709, 1994, 2378, 3122, 3199 |
| BstNI | CCWGG | 5 cut(s) | 774, 1143, 2446, 2925, 2938 |
| BstNSI | RCATGY | 3 cut(s) | 763, 1098, 1116 |
| BstSCI | CCNGG | 7 cut(s) | 711, 726, 772, 1141, 2444, 2923, 2936 |
| BstSFI | CTRYAG | 2 cut(s) | 2418, 3074 |
| BstSLI | GKGCMC | 3 cut(s) | 919, 958, 1409 |
| BstV2I | GAAGAC | 1 cut(s) | 2952 |
| BstX2I | RGATCY | 4 cut(s) | 175, 1325, 2202, 3290 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1191, 2488 |
| BstYI | RGATCY | 4 cut(s) | 175, 1325, 2202, 3290 |
| Bsu15I | ATCGAT | 1 cut(s) | 1662 |
| BsuRI | GGCC | 6 cut(s) | 777, 1177, 1413, 1687, 1980, 2707 |
| BsuTUI | ATCGAT | 1 cut(s) | 1662 |
| BtgI | CCRYGG | 3 cut(s) | 273, 1102, 2100 |
| BtsCI | GGATG | 6 cut(s) | 75, 737, 799, 859, 2020, 2096 |
| BtsI | GCAGTG | 1 cut(s) | 2632 |
| BtsIMutI | CAGTG | 7 cut(s) | 956, 958, 1126, 2191, 2632, 2878, 3138 |
| BveI | ACCTGC | 2 cut(s) | 427, 1006 |
| Cac8I | GCNNGC | 5 cut(s) | 356, 1968, 2025, 2254, 3195 |
| CaiI | CAGNNNCTG | 1 cut(s) | 601 |
| CciI | TCATGA | 1 cut(s) | 2845 |
| CfoI | GCGC | 5 cut(s) | 595, 831, 979, 2056, 2896 |
| Cfr10I | RCCGGY | 1 cut(s) | 1409 |
| Cfr13I | GGNCC | 5 cut(s) | 219, 416, 770, 2458, 2705 |
| ClaI | ATCGAT | 1 cut(s) | 1662 |
| CseI | GACGC | 1 cut(s) | 2048 |
| Csp6I | GTAC | 7 cut(s) | 626, 763, 940, 949, 1087, 2590, 2928 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1126, 1161, 1992, 2027 |
| CviQI | GTAC | 7 cut(s) | 626, 763, 940, 949, 1087, 2590, 2928 |
| DdeI | CTNAG | 7 cut(s) | 1271, 1925, 2373, 3097, 3109, 3126, 3287 |
| DinI | GGCGCC | 1 cut(s) | 2055 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2399 |
| EaeI | YGGCCR | 1 cut(s) | 1411 |
| Eam1104I | CTCTTC | 7 cut(s) | 80, 153, 303, 405, 1428, 2445, 2580 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2399 |
| EarI | CTCTTC | 7 cut(s) | 80, 153, 303, 405, 1428, 2445, 2580 |
| Eco130I | CCWWGG | 6 cut(s) | 273, 1958, 2100, 2412, 2615, 2951 |
| Eco24I | GRGCYC | 2 cut(s) | 804, 3110 |
| Eco31I | GGTCTC | 2 cut(s) | 2605, 3007 |
| Eco47I | GGWCC | 4 cut(s) | 219, 416, 770, 2458 |
| Eco47III | AGCGCT | 1 cut(s) | 830 |
| Eco57I | CTGAAG | 9 cut(s) | 1410, 1637, 1793, 2028, 2064, 2181, 2186, 2854, 3204 |
| Eco88I | CYCGRG | 1 cut(s) | 803 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2828 |
| EcoO109I | RGGNCCY | 2 cut(s) | 416, 2705 |
| EcoRI | GAATTC | 1 cut(s) | 2932 |
| EcoRII | CCWGG | 5 cut(s) | 772, 1141, 2444, 2923, 2936 |
| EcoT14I | CCWWGG | 6 cut(s) | 273, 1958, 2100, 2412, 2615, 2951 |
| EcoT22I | ATGCAT | 2 cut(s) | 583, 1234 |
| EcoT38I | GRGCYC | 2 cut(s) | 804, 3110 |
| EgeI | GGCGCC | 1 cut(s) | 2055 |
| EheI | GGCGCC | 1 cut(s) | 2055 |
| ErhI | CCWWGG | 6 cut(s) | 273, 1958, 2100, 2412, 2615, 2951 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1610, 1642, 2162, 2194 |
| FaqI | GGGAC | 2 cut(s) | 429, 2471 |
| FauI | CCCGC | 2 cut(s) | 359, 921 |
| FauNDI | CATATG | 4 cut(s) | 1061, 1245, 1708, 2604 |
| FokI | GGATG | 6 cut(s) | 82, 724, 806, 866, 2027, 2083 |
| FriOI | GRGCYC | 2 cut(s) | 804, 3110 |
| GlaI | GCGC | 5 cut(s) | 594, 830, 978, 2055, 2895 |
| GsaI | CCCAGC | 2 cut(s) | 23, 1011 |
| GsuI | CTGGAG | 3 cut(s) | 702, 980, 2051 |
| HaeII | RGCGCY | 2 cut(s) | 832, 2057 |
| HaeIII | GGCC | 6 cut(s) | 777, 1177, 1413, 1687, 1980, 2707 |
| HapII | CCGG | 4 cut(s) | 76, 712, 728, 1410 |
| HgaI | GACGC | 1 cut(s) | 2048 |
| HhaI | GCGC | 5 cut(s) | 595, 831, 979, 2056, 2896 |
| Hin1I | GRCGYC | 1 cut(s) | 2054 |
| Hin6I | GCGC | 5 cut(s) | 593, 829, 977, 2054, 2894 |
| HinP1I | GCGC | 5 cut(s) | 593, 829, 977, 2054, 2894 |
| HincII | GTYRAC | 2 cut(s) | 1551, 2221 |
| HindII | GTYRAC | 2 cut(s) | 1551, 2221 |
| HindIII | AAGCTT | 1 cut(s) | 1927 |
| HpaII | CCGG | 4 cut(s) | 76, 712, 728, 1410 |
| HphI | GGTGA | 7 cut(s) | 398, 1442, 1526, 1654, 2360, 3266, 3308 |
| Hpy166II | GTNNAC | 6 cut(s) | 917, 940, 956, 1551, 2221, 2662 |
| Hpy8I | GTNNAC | 6 cut(s) | 917, 940, 956, 1551, 2221, 2662 |
| HpyCH4III | ACNGT | 8 cut(s) | 454, 613, 948, 953, 1130, 2186, 2967, 3133 |
| HpyCH4IV | ACGT | 1 cut(s) | 316 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 974, 1709, 1994, 2378, 3122, 3199 |
| HpyF3I | CTNAG | 7 cut(s) | 1271, 1925, 2373, 3097, 3109, 3126, 3287 |
| HpySE526I | ACGT | 1 cut(s) | 316 |
| Hsp92I | GRCGYC | 1 cut(s) | 2054 |
| HspAI | GCGC | 5 cut(s) | 593, 829, 977, 2054, 2894 |
| KasI | GGCGCC | 1 cut(s) | 2053 |
| LmnI | GCTCC | 8 cut(s) | 174, 199, 247, 683, 787, 2032, 2261, 3088 |
| LweI | GCATC | 3 cut(s) | 590, 988, 1219 |
| MaeII | ACGT | 1 cut(s) | 316 |
| MaeIII | GTNAC | 6 cut(s) | 812, 1025, 1039, 1346, 1483, 1750 |
| MflI | RGATCY | 4 cut(s) | 175, 1325, 2202, 3290 |
| Mly113I | GGCGCC | 1 cut(s) | 2054 |
| MlyI | GAGTC | 4 cut(s) | 477, 971, 3028, 3155 |
| Mph1103I | ATGCAT | 2 cut(s) | 583, 1234 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1806 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1037, 2079 |
| MspA1I | CMGCKG | 2 cut(s) | 601, 1270 |
| MspCI | CTTAAG | 1 cut(s) | 2744 |
| MspI | CCGG | 4 cut(s) | 76, 712, 728, 1410 |
| MspR9I | CCNGG | 7 cut(s) | 713, 728, 774, 1143, 2446, 2925, 2938 |
| Mva1269I | GAATGC | 1 cut(s) | 3139 |
| MvaI | CCWGG | 5 cut(s) | 774, 1143, 2446, 2925, 2938 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 974, 1709, 1994, 2378, 3122, 3199 |
| NarI | GGCGCC | 1 cut(s) | 2054 |
| NciI | CCSGG | 2 cut(s) | 713, 728 |
| NcoI | CCATGG | 2 cut(s) | 273, 2100 |
| NdeI | CATATG | 4 cut(s) | 1061, 1245, 1708, 2604 |
| NheI | GCTAGC | 3 cut(s) | 2023, 2252, 3193 |
| NlaIV | GGNNCC | 7 cut(s) | 170, 417, 477, 1408, 2055, 2459, 2706 |
| NmeAIII | GCCGAG | 1 cut(s) | 1956 |
| NmuCI | GTSAC | 3 cut(s) | 812, 1025, 1039 |
| NsiI | ATGCAT | 2 cut(s) | 583, 1234 |
| NspI | RCATGY | 3 cut(s) | 763, 1098, 1116 |
| NspV | TTCGAA | 2 cut(s) | 283, 1400 |
| PaeR7I | CTCGAG | 1 cut(s) | 803 |
| PagI | TCATGA | 1 cut(s) | 2845 |
| PciI | ACATGT | 2 cut(s) | 759, 1094 |
| PctI | GAATGC | 1 cut(s) | 3139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1806 |
| PflFI | GACNNNGTC | 1 cut(s) | 1886 |
| PfoI | TCCNGGA | 1 cut(s) | 2936 |
| PleI | GAGTC | 4 cut(s) | 476, 970, 3028, 3154 |
| PluTI | GGCGCC | 1 cut(s) | 2057 |
| PpsI | GAGTC | 4 cut(s) | 476, 970, 3028, 3154 |
| PpuMI | RGGWCCY | 1 cut(s) | 416 |
| PscI | ACATGT | 2 cut(s) | 759, 1094 |
| PshBI | ATTAAT | 1 cut(s) | 2574 |
| PsiI | TTATAA | 1 cut(s) | 890 |
| Psp5II | RGGWCCY | 1 cut(s) | 416 |
| Psp6I | CCWGG | 5 cut(s) | 772, 1141, 2444, 2923, 2936 |
| PspFI | CCCAGC | 2 cut(s) | 19, 1007 |
| PspGI | CCWGG | 5 cut(s) | 772, 1141, 2444, 2923, 2936 |
| PspN4I | GGNNCC | 7 cut(s) | 170, 417, 477, 1408, 2055, 2459, 2706 |
| PspPI | GGNCC | 5 cut(s) | 219, 416, 770, 2458, 2705 |
| PspPPI | RGGWCCY | 1 cut(s) | 416 |
| PspXI | VCTCGAGB | 1 cut(s) | 803 |
| PstI | CTGCAG | 2 cut(s) | 2422, 3078 |
| PstNI | CAGNNNCTG | 1 cut(s) | 601 |
| PsuI | RGATCY | 4 cut(s) | 175, 1325, 2202, 3290 |
| PsyI | GACNNNGTC | 1 cut(s) | 1886 |
| PvuII | CAGCTG | 2 cut(s) | 601, 1270 |
| RsaI | GTAC | 7 cut(s) | 627, 764, 941, 950, 1088, 2591, 2929 |
| RsaNI | GTAC | 7 cut(s) | 626, 763, 940, 949, 1087, 2590, 2928 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1037, 2079 |
| Sau96I | GGNCC | 5 cut(s) | 219, 416, 770, 2458, 2705 |
| ScaI | AGTACT | 1 cut(s) | 2591 |
| SchI | GAGTC | 4 cut(s) | 477, 971, 3028, 3155 |
| ScrFI | CCNGG | 7 cut(s) | 713, 728, 774, 1143, 2446, 2925, 2938 |
| SfaNI | GCATC | 3 cut(s) | 590, 988, 1219 |
| SfcI | CTRYAG | 2 cut(s) | 2418, 3074 |
| SfoI | GGCGCC | 1 cut(s) | 2055 |
| Sfr274I | CTCGAG | 1 cut(s) | 803 |
| SfuI | TTCGAA | 2 cut(s) | 283, 1400 |
| SinI | GGWCC | 4 cut(s) | 219, 416, 770, 2458 |
| SlaI | CTCGAG | 1 cut(s) | 803 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1037, 2079 |
| SmlI | CTYRAG | 8 cut(s) | 180, 803, 1351, 1627, 2593, 2744, 2825, 3275 |
| SmoI | CTYRAG | 8 cut(s) | 180, 803, 1351, 1627, 2593, 2744, 2825, 3275 |
| SsiI | CCGC | 5 cut(s) | 112, 352, 629, 928, 1135 |
| SspDI | GGCGCC | 1 cut(s) | 2053 |
| SspI | AATATT | 3 cut(s) | 1190, 1936, 2837 |
| StyD4I | CCNGG | 7 cut(s) | 711, 726, 772, 1141, 2444, 2923, 2936 |
| StyI | CCWWGG | 6 cut(s) | 273, 1958, 2100, 2412, 2615, 2951 |
| TaaI | ACNGT | 8 cut(s) | 454, 613, 948, 953, 1130, 2186, 2967, 3133 |
| TaiI | ACGT | 1 cut(s) | 319 |
| TatI | WGTACW | 4 cut(s) | 762, 939, 948, 2589 |
| TscAI | CASTG | 7 cut(s) | 958, 963, 1133, 2191, 2632, 2878, 3138 |
| TseFI | GTSAC | 3 cut(s) | 812, 1025, 1039 |
| Tsp45I | GTSAC | 3 cut(s) | 812, 1025, 1039 |
| TspGWI | ACGGA | 3 cut(s) | 74, 3048, 3133 |
| TspRI | CASTG | 7 cut(s) | 958, 963, 1133, 2191, 2632, 2878, 3138 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1886 |
| Vha464I | CTTAAG | 1 cut(s) | 2744 |
| VneI | GTGCAC | 2 cut(s) | 915, 954 |
| VpaK11BI | GGWCC | 4 cut(s) | 219, 416, 770, 2458 |
| VspI | ATTAAT | 1 cut(s) | 2574 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2828 |
| XapI | RAATTY | 8 cut(s) | 842, 892, 1730, 2130, 2729, 2749, 2932, 3263 |
| XbaI | TCTAGA | 2 cut(s) | 1334, 3022 |
| XceI | RCATGY | 3 cut(s) | 763, 1098, 1116 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 677 |
| XhoI | CTCGAG | 1 cut(s) | 803 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1806 |
| ZrmI | AGTACT | 1 cut(s) | 2591 |
| Zsp2I | ATGCAT | 2 cut(s) | 583, 1234 |