Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1121 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1393 |
| AccII | CGCG | 1 cut(s) | 468 |
| AciI | CCGC | 4 cut(s) | 278, 466, 468, 1209 |
| AcoI | YGGCCR | 1 cut(s) | 1384 |
| AcsI | RAATTY | 3 cut(s) | 417, 1067, 1075 |
| AfaI | GTAC | 3 cut(s) | 661, 766, 809 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 195, 251, 296, 367, 669, 670, 1330, 1393 |
| AgsI | TTSAA | 9 cut(s) | 379, 460, 619, 680, 863, 926, 975, 1075, 1510 |
| AluBI | AGCT | 8 cut(s) | 41, 86, 212, 224, 229, 240, 425, 869 |
| AluI | AGCT | 8 cut(s) | 41, 86, 212, 224, 229, 240, 425, 869 |
| Alw21I | GWGCWC | 1 cut(s) | 1016 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 44, 872 |
| AoxI | GGCC | 4 cut(s) | 151, 287, 1384, 1493 |
| ApeKI | GCWGC | 5 cut(s) | 41, 44, 866, 912, 1112 |
| ApoI | RAATTY | 3 cut(s) | 417, 1067, 1075 |
| AspS9I | GGNCC | 4 cut(s) | 113, 152, 287, 1321 |
| AsuHPI | GGTGA | 3 cut(s) | 17, 229, 1285 |
| AsuII | TTCGAA | 1 cut(s) | 897 |
| AvaII | GGWCC | 2 cut(s) | 113, 1321 |
| BaeGI | GKGCMC | 1 cut(s) | 1336 |
| BalI | TGGCCA | 1 cut(s) | 1386 |
| Bbv12I | GWGCWC | 1 cut(s) | 1016 |
| BbvI | GCAGC | 5 cut(s) | 28, 31, 878, 924, 1099 |
| BccI | CCATC | 8 cut(s) | 400, 529, 793, 797, 940, 1323, 1376, 1465 |
| BciVI | GTATCC | 1 cut(s) | 605 |
| BfaI | CTAG | 3 cut(s) | 555, 578, 789 |
| BfmI | CTRYAG | 2 cut(s) | 720, 1089 |
| BfuI | GTATCC | 1 cut(s) | 605 |
| BisI | GCNGC | 6 cut(s) | 42, 45, 279, 867, 913, 1113 |
| BlpI | GCTNAGC | 1 cut(s) | 225 |
| BlsI | GCNGC | 6 cut(s) | 43, 46, 280, 868, 914, 1114 |
| Bme18I | GGWCC | 2 cut(s) | 113, 1321 |
| BmgT120I | GGNCC | 4 cut(s) | 113, 152, 287, 1321 |
| BmiI | GGNNCC | 3 cut(s) | 114, 772, 1365 |
| BmrI | ACTGGG | 1 cut(s) | 655 |
| BmsI | GCATC | 3 cut(s) | 907, 1333, 1417 |
| BmuI | ACTGGG | 1 cut(s) | 655 |
| BpmI | CTGGAG | 1 cut(s) | 165 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 225 |
| Bpu14I | TTCGAA | 1 cut(s) | 897 |
| BpuEI | CTTGAG | 2 cut(s) | 833, 1124 |
| BsaJI | CCNNGG | 4 cut(s) | 466, 712, 1324, 1392 |
| BsaWI | WCCGGW | 1 cut(s) | 1022 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1348, 1378 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 195, 251, 296, 367, 669, 670, 1330, 1393 |
| Bse1I | ACTGG | 1 cut(s) | 650 |
| Bse3DI | GCAATG | 1 cut(s) | 882 |
| BseDI | CCNNGG | 4 cut(s) | 466, 712, 1324, 1392 |
| BseGI | GGATG | 6 cut(s) | 411, 831, 942, 1050, 1334, 1387 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 195, 251, 296, 367, 669, 670, 1330, 1393 |
| BseMI | GCAATG | 1 cut(s) | 882 |
| BseMII | CTCAG | 4 cut(s) | 216, 1238, 1350, 1461 |
| BseNI | ACTGG | 1 cut(s) | 650 |
| BseRI | GAGGAG | 1 cut(s) | 162 |
| BseSI | GKGCMC | 1 cut(s) | 1336 |
| BseXI | GCAGC | 5 cut(s) | 28, 31, 878, 924, 1099 |
| Bsh1236I | CGCG | 1 cut(s) | 468 |
| BshFI | GGCC | 4 cut(s) | 153, 289, 1386, 1495 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1016 |
| BsiSI | CCGG | 2 cut(s) | 959, 1023 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 195, 251, 296, 367, 669, 670, 1330, 1393 |
| BsmI | GAATGC | 4 cut(s) | 201, 382, 957, 1101 |
| BsnI | GGCC | 4 cut(s) | 153, 289, 1386, 1495 |
| Bsp119I | TTCGAA | 1 cut(s) | 897 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1016, 1336 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 225 |
| Bsp19I | CCATGG | 2 cut(s) | 1324, 1392 |
| BspACI | CCGC | 4 cut(s) | 278, 466, 468, 1209 |
| BspANI | GGCC | 4 cut(s) | 153, 289, 1386, 1495 |
| BspCNI | CTCAG | 4 cut(s) | 217, 1239, 1351, 1460 |
| BspFNI | CGCG | 1 cut(s) | 468 |
| BspLI | GGNNCC | 3 cut(s) | 114, 772, 1365 |
| BspT104I | TTCGAA | 1 cut(s) | 897 |
| BsrDI | GCAATG | 1 cut(s) | 882 |
| BsrI | ACTGG | 1 cut(s) | 650 |
| BssECI | CCNNGG | 4 cut(s) | 466, 712, 1324, 1392 |
| BssT1I | CCWWGG | 3 cut(s) | 712, 1324, 1392 |
| Bst4CI | ACNGT | 2 cut(s) | 1338, 1404 |
| Bst6I | CTCTTC | 1 cut(s) | 3 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 872, 1011 |
| BstBI | TTCGAA | 1 cut(s) | 897 |
| BstC8I | GCNNGC | 2 cut(s) | 231, 1202 |
| BstDEI | CTNAG | 7 cut(s) | 178, 225, 981, 1247, 1258, 1359, 1447 |
| BstDSI | CCRYGG | 3 cut(s) | 466, 1324, 1392 |
| BstF5I | GGATG | 6 cut(s) | 411, 831, 942, 1050, 1334, 1387 |
| BstFNI | CGCG | 1 cut(s) | 468 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 230, 872, 968, 1011, 1201 |
| BstSFI | CTRYAG | 2 cut(s) | 720, 1089 |
| BstSLI | GKGCMC | 1 cut(s) | 1336 |
| BstUI | CGCG | 1 cut(s) | 468 |
| BstV1I | GCAGC | 5 cut(s) | 28, 31, 878, 924, 1099 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1181 |
| BsuI | GTATCC | 1 cut(s) | 605 |
| BsuRI | GGCC | 4 cut(s) | 153, 289, 1386, 1495 |
| BtgI | CCRYGG | 3 cut(s) | 466, 1324, 1392 |
| BtgZI | GCGATG | 1 cut(s) | 930 |
| BtsCI | GGATG | 6 cut(s) | 411, 831, 942, 1050, 1334, 1387 |
| BtsI | GCAGTG | 1 cut(s) | 578 |
| BtsIMutI | CAGTG | 3 cut(s) | 28, 578, 1356 |
| Cac8I | GCNNGC | 2 cut(s) | 231, 1202 |
| CaiI | CAGNNNCTG | 2 cut(s) | 44, 872 |
| Cfr13I | GGNCC | 4 cut(s) | 113, 152, 287, 1321 |
| Cfr42I | CCGCGG | 1 cut(s) | 469 |
| Csp6I | GTAC | 3 cut(s) | 660, 765, 808 |
| CviAII | CATG | 3 cut(s) | 1313, 1325, 1393 |
| CviQI | GTAC | 3 cut(s) | 660, 765, 808 |
| DdeI | CTNAG | 7 cut(s) | 178, 225, 981, 1247, 1258, 1359, 1447 |
| EaeI | YGGCCR | 1 cut(s) | 1384 |
| Eam1104I | CTCTTC | 1 cut(s) | 3 |
| EarI | CTCTTC | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 3 cut(s) | 712, 1324, 1392 |
| Eco32I | GATATC | 1 cut(s) | 273 |
| Eco47I | GGWCC | 2 cut(s) | 113, 1321 |
| EcoO109I | RGGNCCY | 2 cut(s) | 113, 152 |
| EcoRI | GAATTC | 1 cut(s) | 417 |
| EcoRV | GATATC | 1 cut(s) | 273 |
| EcoT14I | CCWWGG | 3 cut(s) | 712, 1324, 1392 |
| ErhI | CCWWGG | 3 cut(s) | 712, 1324, 1392 |
| FaeI | CATG | 3 cut(s) | 1316, 1328, 1396 |
| FatI | CATG | 3 cut(s) | 1312, 1324, 1392 |
| FauI | CCCGC | 1 cut(s) | 1216 |
| Fnu4HI | GCNGC | 6 cut(s) | 42, 45, 279, 867, 913, 1113 |
| FokI | GGATG | 6 cut(s) | 418, 838, 949, 1057, 1341, 1394 |
| Fsp4HI | GCNGC | 6 cut(s) | 42, 45, 279, 867, 913, 1113 |
| FspBI | CTAG | 3 cut(s) | 555, 578, 789 |
| GluI | GCNGC | 6 cut(s) | 42, 45, 279, 867, 913, 1113 |
| GsuI | CTGGAG | 1 cut(s) | 165 |
| HaeIII | GGCC | 4 cut(s) | 153, 289, 1386, 1495 |
| HapII | CCGG | 2 cut(s) | 959, 1023 |
| Hin1II | CATG | 3 cut(s) | 1316, 1328, 1396 |
| HincII | GTYRAC | 1 cut(s) | 66 |
| HindII | GTYRAC | 1 cut(s) | 66 |
| HindIII | AAGCTT | 2 cut(s) | 210, 238 |
| HinfI | GANTC | 8 cut(s) | 131, 300, 634, 748, 859, 1026, 1427, 1478 |
| HpaII | CCGG | 2 cut(s) | 959, 1023 |
| HphI | GGTGA | 3 cut(s) | 17, 229, 1285 |
| Hpy166II | GTNNAC | 3 cut(s) | 66, 586, 798 |
| Hpy188I | TCNGA | 5 cut(s) | 405, 639, 1248, 1381, 1450 |
| Hpy188III | TCNNGA | 7 cut(s) | 206, 532, 1055, 1103, 1174, 1412, 1421 |
| Hpy8I | GTNNAC | 3 cut(s) | 66, 586, 798 |
| HpyAV | CCTTC | 5 cut(s) | 589, 1157, 1180, 1451, 1516 |
| HpyCH4III | ACNGT | 2 cut(s) | 1338, 1404 |
| HpyCH4V | TGCA | 7 cut(s) | 475, 668, 815, 875, 1316, 1346, 1408 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 230, 872, 968, 1011, 1201 |
| HpyF3I | CTNAG | 7 cut(s) | 178, 225, 981, 1247, 1258, 1359, 1447 |
| Hsp92II | CATG | 3 cut(s) | 1316, 1328, 1396 |
| KspI | CCGCGG | 1 cut(s) | 469 |
| LmnI | GCTCC | 3 cut(s) | 198, 770, 1369 |
| Lsp1109I | GCAGC | 5 cut(s) | 28, 31, 878, 924, 1099 |
| LweI | GCATC | 3 cut(s) | 907, 1333, 1417 |
| MaeI | CTAG | 3 cut(s) | 555, 578, 789 |
| MaeIII | GTNAC | 2 cut(s) | 217, 1293 |
| MboII | GAAGA | 5 cut(s) | 20, 1024, 1422, 1473, 1511 |
| MhlI | GDGCHC | 2 cut(s) | 1016, 1336 |
| MlsI | TGGCCA | 1 cut(s) | 1386 |
| MluNI | TGGCCA | 1 cut(s) | 1386 |
| MlyI | GAGTC | 1 cut(s) | 1035 |
| Mox20I | TGGCCA | 1 cut(s) | 1386 |
| MscI | TGGCCA | 1 cut(s) | 1386 |
| MseI | TTAA | 6 cut(s) | 89, 399, 591, 776, 830, 1464 |
| Msp20I | TGGCCA | 1 cut(s) | 1386 |
| MspA1I | CMGCKG | 4 cut(s) | 41, 224, 278, 468 |
| MspI | CCGG | 2 cut(s) | 959, 1023 |
| Mva1269I | GAATGC | 4 cut(s) | 201, 382, 957, 1101 |
| MvnI | CGCG | 1 cut(s) | 468 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 230, 872, 968, 1011, 1201 |
| NcoI | CCATGG | 2 cut(s) | 1324, 1392 |
| NlaIII | CATG | 3 cut(s) | 1316, 1328, 1396 |
| NlaIV | GGNNCC | 3 cut(s) | 114, 772, 1365 |
| NmuCI | GTSAC | 1 cut(s) | 217 |
| NspV | TTCGAA | 1 cut(s) | 897 |
| PctI | GAATGC | 4 cut(s) | 201, 382, 957, 1101 |
| PfeI | GAWTC | 7 cut(s) | 131, 300, 634, 748, 859, 1427, 1478 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1393 |
| PkrI | GCNGC | 6 cut(s) | 43, 46, 280, 868, 914, 1114 |
| PleI | GAGTC | 1 cut(s) | 1034 |
| PpsI | GAGTC | 1 cut(s) | 1034 |
| PpuMI | RGGWCCY | 1 cut(s) | 113 |
| PsiI | TTATAA | 1 cut(s) | 1121 |
| Psp5II | RGGWCCY | 1 cut(s) | 113 |
| PspN4I | GGNNCC | 3 cut(s) | 114, 772, 1365 |
| PspPI | GGNCC | 4 cut(s) | 113, 152, 287, 1321 |
| PspPPI | RGGWCCY | 1 cut(s) | 113 |
| PstNI | CAGNNNCTG | 2 cut(s) | 44, 872 |
| PvuII | CAGCTG | 2 cut(s) | 41, 224 |
| RsaI | GTAC | 3 cut(s) | 661, 766, 809 |
| RsaNI | GTAC | 3 cut(s) | 660, 765, 808 |
| SacII | CCGCGG | 1 cut(s) | 469 |
| SaqAI | TTAA | 6 cut(s) | 89, 399, 591, 776, 830, 1464 |
| SatI | GCNGC | 6 cut(s) | 42, 45, 279, 867, 913, 1113 |
| Sau96I | GGNCC | 4 cut(s) | 113, 152, 287, 1321 |
| SchI | GAGTC | 1 cut(s) | 1035 |
| SduI | GDGCHC | 2 cut(s) | 1016, 1336 |
| SfaNI | GCATC | 3 cut(s) | 907, 1333, 1417 |
| SfcI | CTRYAG | 2 cut(s) | 720, 1089 |
| Sfr303I | CCGCGG | 1 cut(s) | 469 |
| SfuI | TTCGAA | 1 cut(s) | 897 |
| SgrBI | CCGCGG | 1 cut(s) | 469 |
| SinI | GGWCC | 2 cut(s) | 113, 1321 |
| SmlI | CTYRAG | 2 cut(s) | 848, 1103 |
| SmoI | CTYRAG | 2 cut(s) | 848, 1103 |
| SsiI | CCGC | 4 cut(s) | 278, 466, 468, 1209 |
| SspMI | CTAG | 3 cut(s) | 555, 578, 789 |
| StyI | CCWWGG | 3 cut(s) | 712, 1324, 1392 |
| TaaI | ACNGT | 2 cut(s) | 1338, 1404 |
| TaqI | TCGA | 5 cut(s) | 415, 897, 1341, 1420, 1484 |
| TauI | GCSGC | 1 cut(s) | 281 |
| TfiI | GAWTC | 7 cut(s) | 131, 300, 634, 748, 859, 1427, 1478 |
| Tru1I | TTAA | 6 cut(s) | 89, 399, 591, 776, 830, 1464 |
| Tru9I | TTAA | 6 cut(s) | 89, 399, 591, 776, 830, 1464 |
| TscAI | CASTG | 3 cut(s) | 28, 578, 1363 |
| TseFI | GTSAC | 1 cut(s) | 217 |
| TseI | GCWGC | 5 cut(s) | 41, 44, 866, 912, 1112 |
| Tsp45I | GTSAC | 1 cut(s) | 217 |
| TspDTI | ATGAA | 4 cut(s) | 375, 729, 1301, 1440 |
| TspRI | CASTG | 3 cut(s) | 28, 578, 1363 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1393 |
| VpaK11BI | GGWCC | 2 cut(s) | 113, 1321 |
| XapI | RAATTY | 3 cut(s) | 417, 1067, 1075 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 792 |
| XspI | CTAG | 3 cut(s) | 555, 578, 789 |