Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0000557

Physical Location & Seq

Genomic Coordinates Reverse (-)

44613075 .. 44629429

Gene Structure 16355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG359600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGAGCAACCACGTCTCGGATTCTGATCGACCTACATCAAATCCTCTCCCTCCACAATCCGAAGCTTTTGATGATTACAAAAATGCATCTTTATCAGCGCAGCAGCTGTTAGAGACTGTGGCTGAACAAGTACCGCATTTTGGAACTGAACAGGATAAAGATCATTGTCCTTTCCATTTGAAAACTGGAGCTTGTCGGATGAGGGGCTCGAGGTCTGTTAATGCTGTCATGCCTTCATGTGATTCTTATTCAATGCAAGTTCACTTTGGTGGAGATTCAGATTTTCTGCCTTGGTTATTCAAGTACATTGACGAAGAAATTGAGCGCTGTTATGAAGACTTTTATGAGGATGTTCATACAGAGTTCTTGAAGTTCGGAGAAATTATAAATTTCAAGGTGTGCATAAATGGTGCACCCCACTTGCGGGGAAATGTGTACGTACAGTACAGTGCACTGGAGTCAGCTTTGGTTGCGCATCAATCTGTCAATGGTCGCTACTTTGCTGGGAAGCAGATAAGTTGTGACTTCATCAATGTGACCAGATGGAAGGTTGCCATATGTGGGGAATATGTGAAGTCGAGGTACAAGACATGTTCCCGTGGTAGGACATGCAATTTTATCCACTGTTTCCGCAATCCTGGTGGAGAGTATGAATGGGCTGATAGTGATAGGCCACCCCCAAAATATTGGGTGGAAAAGATGGTTGCATTATTTGGTTATTCTGATGCATACAAGAAACATATGATGGAGGATAACTCTGGACAGCTGAGGAACTCTAGCAAGAAGTCAATGACAGATTCACAGAGGTATGTTGTGCAAAGATCTAGTTCTAGAGATGGGAGTTACTCAAGTTTTGCTGGTTCTAGTAGAAGATACGACAATGAAAATTATGCTCCGAAGGGCACCGGCCACCATAGACCTTCAGGTGAAGAGAGCGCTTACTTGAAGGACTTTAATCACAGGAAGAACAGAAAGCTAGGATATGTTACAAGTGATGATGTTGTGCAGTTGAGGGGTAAGGTTGCTTGTGAAATCAGTAGTGCAGATGAGTTGACCCTCACAGAGCTTATGTTCAATGGCGTTTTCAAGGACAGAAAGGTAGAAGAGATGGTATCTCTTCTCTTATGTTTTGTTTGGCGGGAAAAACTAAAAGATGCTACAAAACCAAGGAAGAAATTGACCTGCTCTTCTTGCAATTACAAGAAACTGCTCGGAGGGTGGCTGAAGTTCAGCTTGAGTTTTTTTCTGGTTGAAATTGACATCGATAGCTTTGTGAGTTCATTTCGGCCTGATATTATGGAGGCTACATATGCTTGGGCAGAAGGGTCAAAATTTTACGAGATAATGTCAGATTTTGAGGGTAGCTTAATCAGGGCAATTAGGAGATTAGAGGAAGTTCTTCAGCAACTTATACACGCAGCCAATTCTATTGGAGAAATTGATCTTTTGAGGAGGCTGTTTCAAAAATTAAGAGAGACATTGTCTTTGCAGCTTCCCTATACTTGTAATTTTTGGCTGGAATGTTTTTGCCATCGTTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030628 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

513

Amino Acids

59.13

Weight (kDa)

7.19

Isoelectric Point (pI)

45.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSHCT	PF08148	332 - 484	9.3e-33	DSHCT (NUC185) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10320 AT1G10320
fragaria_vesca	FvH4_1g01270 FvH4_5g28020
malus_domestica	MD05G1262900.v1.1 MD05G1263000.v1.1 MD15G1442200.v1.1 MD15G1442300.v1.1
prunus_persica	Prupe.1G585000_v2.0.a1
pyrus_communis	pycom05g24740 pycom15g39000
rosa_chinensis	RchiOBHm_Chr1g0376021 RchiOBHm_Chr2g0152801 RchiOBHm_Chr6g0272511 RchiOBHm_Chr6g0272531 RchiOBHm_Chr6g0289931 RchiOBHm_Chr6g0289941 RchiOBHm_Chr6g0302241 RchiOBHm_Chr7g0221381 RchiOBHm_Chr7g0221391 RchiOBHm_Chr7g0221411
rosa_laevigata	RLG00000000942 RLG00000002158 RLG00000013669 RLG00000013670
rosa_multiflora	Rmu_co8352637.1_g000001 Rmu_co8463189.1_g000001 Rmu_sc0000092.1_g000005 Rmu_sc0001575.1_g000019 Rmu_sc0001579.1_g000007 Rmu_sc0002847.1_g000017 Rmu_sc0009283.1_g000001 Rmu_sc0018146.1_g000002 Rmu_sc0026927.1_g000002 Rmu_sc0026927.1_g000003 Rmu_sc0031601.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238370 Rroxscaffold_5G00353980 Rroxscaffold_6G00399580 Rroxscaffold_7G00181850 Rroxscaffold_7G00196190 Rroxscaffold_7G00212980
rosa_rugosa	Rorug02G0202700 Rorug06G0053300 Rorug06G0073400 Rorug06G0208900 Rorug07G0202300 Rorug07G0202300 Rorug07G0202300
rosa_samantha	Rh1AG059200 Rh1AG066100 Rh1AG285800 Rh3AG222700 Rh3DG354600 Rh5BG508200 Rh5BG539300 Rh5BG541200 Rh5CG264600 Rh5CG531900 Rh5CG562800 Rh5CG563900 Rh5DG285300 Rh6AG094100 Rh6AG186000 Rh6AG186100 Rh6AG254700 Rh6BG189200 Rh6BG258000 Rh6CG186900 Rh6CG187000 Rh6DG178300 Rh6DG178700 Rh6DG349500 Rh7AG341800 Rh7AG341900 Rh7AG458600 Rh7BG332500 Rh7CG359600 Rh7DG340200 Rh7DG340300
rosa_wichuraiana	Rw2G036370 Rw6G016030 Rw7G029050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	386
Acc16I	TGCGCA	1 cut(s)	474
Acc36I	ACCTGC	1 cut(s)	1190
AccB1I	GGYRCC	1 cut(s)	902
AciI	CCGC	4 cut(s)	134, 424, 631, 1138
AcoI	YGGCCR	1 cut(s)	907
AcsI	RAATTY	2 cut(s)	388, 1331
AcuI	CTGAAG	3 cut(s)	906, 1244, 1385
AfaI	GTAC	6 cut(s)	132, 305, 437, 441, 446, 584
AfeI	AGCGCT	2 cut(s)	326, 937
AfiI	CCNNNNNNNGG	6 cut(s)	16, 140, 423, 424, 561, 603
AflIII	ACRYGT	1 cut(s)	590
AjiI	CACGTC	1 cut(s)	13
AjnI	CCWGG	1 cut(s)	637
AleI	CACNNNNGTG	1 cut(s)	267
Alw21I	GWGCWC	2 cut(s)	415, 454
Alw26I	GTCTC	3 cut(s)	19, 107, 1469
Alw44I	GTGCAC	2 cut(s)	411, 450
AlwNI	CAGNNNCTG	1 cut(s)	106
Ama87I	CYCGRG	1 cut(s)	208
Aor51HI	AGCGCT	2 cut(s)	326, 937
AoxI	GGCC	3 cut(s)	671, 907, 1286
ApaLI	GTGCAC	2 cut(s)	411, 450
ApeKI	GCWGC	4 cut(s)	100, 103, 1418, 1489
ApoI	RAATTY	2 cut(s)	388, 1331
ArsI	GACNNNNNNTTYG	2 cut(s)	1468, 1500
Asp700I	GAANNNNTTC	1 cut(s)	1398
AspLEI	GCGC	4 cut(s)	100, 327, 475, 938
AsuHPI	GGTGA	1 cut(s)	938
AvaI	CYCGRG	1 cut(s)	208
BaeGI	GKGCMC	3 cut(s)	415, 454, 905
BanI	GGYRCC	1 cut(s)	902
BanII	GRGCYC	1 cut(s)	209
BarI	GAAGNNNNNNTAC	2 cut(s)	566, 598
BbsI	GAAGAC	1 cut(s)	342
Bbv12I	GWGCWC	2 cut(s)	415, 454
BbvCI	CCTCAGC	1 cut(s)	767
BbvI	GCAGC	4 cut(s)	112, 115, 1430, 1501
BccI	CCATC	6 cut(s)	537, 694, 739, 830, 1102, 1539
BciT130I	CCWGG	1 cut(s)	639
BcoDI	GTCTC	3 cut(s)	19, 107, 1469
BfaI	CTAG	5 cut(s)	777, 825, 831, 864, 977
BfoI	RGCGCY	2 cut(s)	328, 939
BfuAI	ACCTGC	1 cut(s)	1190
BglII	AGATCT	1 cut(s)	821
BisI	GCNGC	4 cut(s)	101, 104, 1419, 1490
BlsI	GCNGC	4 cut(s)	102, 105, 1420, 1491
Bme1390I	CCNGG	1 cut(s)	639
BmeT110I	CYCGRG	1 cut(s)	208
BmgBI	CACGTC	1 cut(s)	13
BmiI	GGNNCC	1 cut(s)	904
BmrFI	CCNGG	1 cut(s)	639
BmsI	GCATC	4 cut(s)	95, 484, 715, 1144
BpiI	GAAGAC	1 cut(s)	342
BplI	GAGNNNNNCTC	2 cut(s)	740, 772
BpmI	CTGGAG	2 cut(s)	207, 476
Bpu10I	CCTNAGC	1 cut(s)	767
BpuEI	CTTGAG	2 cut(s)	832, 1255
Bsa29I	ATCGAT	1 cut(s)	1263
BsaAI	YACGTR	1 cut(s)	439
BsaBI	GATNNNNATC	2 cut(s)	24, 159
BsaJI	CCNNGG	3 cut(s)	290, 598, 1166
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 140, 423, 424, 561, 603
Bse118I	RCCGGY	1 cut(s)	905
Bse1I	ACTGG	2 cut(s)	190, 459
Bse8I	GATNNNNATC	2 cut(s)	24, 159
BseBI	CCWGG	1 cut(s)	639
BseCI	ATCGAT	1 cut(s)	1263
BseDI	CCNNGG	3 cut(s)	290, 598, 1166
BseGI	GGATG	2 cut(s)	204, 355
BseJI	GATNNNNATC	2 cut(s)	24, 159
BseLI	CCNNNNNNNGG	6 cut(s)	16, 140, 423, 424, 561, 603
BseMII	CTCAG	1 cut(s)	758
BseNI	ACTGG	2 cut(s)	190, 459
BseRI	GAGGAG	1 cut(s)	1465
BseSI	GKGCMC	3 cut(s)	415, 454, 905
BseXI	GCAGC	4 cut(s)	112, 115, 1430, 1501
BseYI	CCCAGC	1 cut(s)	503
BsgI	GTGCAG	2 cut(s)	1025, 1062
BshFI	GGCC	3 cut(s)	673, 909, 1288
BshNI	GGYRCC	1 cut(s)	902
BshVI	ATCGAT	1 cut(s)	1263
BsiHKAI	GWGCWC	2 cut(s)	415, 454
BsiHKCI	CYCGRG	1 cut(s)	208
BsiSI	CCGG	1 cut(s)	906
BslI	CCNNNNNNNGG	6 cut(s)	16, 140, 423, 424, 561, 603
BsmAI	GTCTC	3 cut(s)	19, 107, 1469
BsmBI	CGTCTC	1 cut(s)	19
BsnI	GGCC	3 cut(s)	673, 909, 1288
BsoBI	CYCGRG	1 cut(s)	208
Bsp1286I	GDGCHC	4 cut(s)	209, 415, 454, 905
Bsp143I	GATC	4 cut(s)	25, 160, 821, 1441
BspACI	CCGC	4 cut(s)	134, 424, 631, 1138
BspANI	GGCC	3 cut(s)	673, 909, 1288
BspCNI	CTCAG	1 cut(s)	759
BspDI	ATCGAT	1 cut(s)	1263
BspLI	GGNNCC	1 cut(s)	904
BspMI	ACCTGC	1 cut(s)	1190
BspQI	GCTCTTC	1 cut(s)	1192
BspT107I	GGYRCC	1 cut(s)	902
BsrFI	RCCGGY	1 cut(s)	905
BsrI	ACTGG	2 cut(s)	190, 459
BssAI	RCCGGY	1 cut(s)	905
BssECI	CCNNGG	3 cut(s)	290, 598, 1166
BssMI	GATC	4 cut(s)	25, 160, 821, 1441
BssT1I	CCWWGG	2 cut(s)	290, 1166
Bst2UI	CCWGG	1 cut(s)	639
Bst4CI	ACNGT	4 cut(s)	118, 444, 449, 626
Bst6I	CTCTTC	4 cut(s)	924, 1098, 1122, 1192
BstBAI	YACGTR	1 cut(s)	439
BstDEI	CTNAG	1 cut(s)	767
BstDSI	CCRYGG	1 cut(s)	598
BstF5I	GGATG	2 cut(s)	204, 355
BstH2I	RGCGCY	2 cut(s)	328, 939
BstHHI	GCGC	4 cut(s)	100, 327, 475, 938
BstKTI	GATC	4 cut(s)	28, 163, 824, 1444
BstMAI	GTCTC	3 cut(s)	19, 107, 1469
BstMBI	GATC	4 cut(s)	25, 160, 821, 1441
BstMWI	GCNNNNNNNGC	3 cut(s)	470, 1191, 1310
BstNI	CCWGG	1 cut(s)	639
BstNSI	RCATGY	2 cut(s)	594, 612
BstSCI	CCNGG	1 cut(s)	637
BstSLI	GKGCMC	3 cut(s)	415, 454, 905
BstSNI	TACGTA	1 cut(s)	439
BstV1I	GCAGC	4 cut(s)	112, 115, 1430, 1501
BstV2I	GAAGAC	1 cut(s)	342
BstX2I	RGATCY	1 cut(s)	821
BstXI	CCANNNNNNTGG	1 cut(s)	687
BstYI	RGATCY	1 cut(s)	821
Bsu15I	ATCGAT	1 cut(s)	1263
BsuRI	GGCC	3 cut(s)	673, 909, 1288
BsuTUI	ATCGAT	1 cut(s)	1263
BtgI	CCRYGG	1 cut(s)	598
BtrI	CACGTC	1 cut(s)	13
BtsCI	GGATG	2 cut(s)	204, 355
BtsIMutI	CAGTG	3 cut(s)	452, 454, 622
BveI	ACCTGC	1 cut(s)	1190
CaiI	CAGNNNCTG	1 cut(s)	106
CfoI	GCGC	4 cut(s)	100, 327, 475, 938
Cfr10I	RCCGGY	1 cut(s)	905
ClaI	ATCGAT	1 cut(s)	1263
Csp6I	GTAC	6 cut(s)	131, 304, 436, 440, 445, 583
CspCI	CAANNNNNGTGG	2 cut(s)	622, 657
CviAII	CATG	4 cut(s)	229, 237, 591, 609
CviQI	GTAC	6 cut(s)	131, 304, 436, 440, 445, 583
DdeI	CTNAG	1 cut(s)	767
DpnI	GATC	4 cut(s)	27, 162, 823, 1443
DpnII	GATC	4 cut(s)	25, 160, 821, 1441
EaeI	YGGCCR	1 cut(s)	907
Eam1104I	CTCTTC	4 cut(s)	924, 1098, 1122, 1192
EarI	CTCTTC	4 cut(s)	924, 1098, 1122, 1192
Eco105I	TACGTA	1 cut(s)	439
Eco130I	CCWWGG	2 cut(s)	290, 1166
Eco24I	GRGCYC	1 cut(s)	209
Eco47III	AGCGCT	2 cut(s)	326, 937
Eco57I	CTGAAG	3 cut(s)	906, 1244, 1385
Eco88I	CYCGRG	1 cut(s)	208
EcoRII	CCWGG	1 cut(s)	637
EcoT14I	CCWWGG	2 cut(s)	290, 1166
EcoT22I	ATGCAT	2 cut(s)	88, 730
EcoT38I	GRGCYC	1 cut(s)	209
ErhI	CCWWGG	2 cut(s)	290, 1166
Esp3I	CGTCTC	1 cut(s)	19
FaeI	CATG	4 cut(s)	232, 240, 594, 612
FalI	AAGNNNNNCTT	2 cut(s)	1217, 1249
FatI	CATG	4 cut(s)	228, 236, 590, 608
FauI	CCCGC	2 cut(s)	417, 1131
FauNDI	CATATG	3 cut(s)	557, 741, 1309
Fnu4HI	GCNGC	4 cut(s)	101, 104, 1419, 1490
FokI	GGATG	2 cut(s)	211, 362
FriOI	GRGCYC	1 cut(s)	209
Fsp4HI	GCNGC	4 cut(s)	101, 104, 1419, 1490
FspBI	CTAG	5 cut(s)	777, 825, 831, 864, 977
FspI	TGCGCA	1 cut(s)	474
GlaI	GCGC	4 cut(s)	99, 326, 474, 937
GluI	GCNGC	4 cut(s)	101, 104, 1419, 1490
GsaI	CCCAGC	1 cut(s)	507
GsuI	CTGGAG	2 cut(s)	207, 476
HaeII	RGCGCY	2 cut(s)	328, 939
HaeIII	GGCC	3 cut(s)	673, 909, 1288
HapII	CCGG	1 cut(s)	906
HhaI	GCGC	4 cut(s)	100, 327, 475, 938
Hin1II	CATG	4 cut(s)	232, 240, 594, 612
Hin6I	GCGC	4 cut(s)	98, 325, 473, 936
HinP1I	GCGC	4 cut(s)	98, 325, 473, 936
HincII	GTYRAC	1 cut(s)	1053
HindII	GTYRAC	1 cut(s)	1053
HindIII	AAGCTT	1 cut(s)	63
HinfI	GANTC	5 cut(s)	20, 242, 275, 458, 797
HpaII	CCGG	1 cut(s)	906
HphI	GGTGA	1 cut(s)	938
Hpy166II	GTNNAC	5 cut(s)	262, 413, 436, 452, 1053
Hpy188III	TCNNGA	3 cut(s)	367, 759, 831
Hpy8I	GTNNAC	5 cut(s)	262, 413, 436, 452, 1053
HpyAV	CCTTC	6 cut(s)	243, 541, 892, 930, 940, 1316
HpyCH4III	ACNGT	4 cut(s)	118, 444, 449, 626
HpyCH4IV	ACGT	2 cut(s)	12, 438
HpyF10VI	GCNNNNNNNGC	3 cut(s)	470, 1191, 1310
HpyF3I	CTNAG	1 cut(s)	767
HpySE526I	ACGT	2 cut(s)	12, 438
Hsp92II	CATG	4 cut(s)	232, 240, 594, 612
HspAI	GCGC	4 cut(s)	98, 325, 473, 936
Kzo9I	GATC	4 cut(s)	25, 160, 821, 1441
LguI	GCTCTTC	1 cut(s)	1192
LmnI	GCTCC	2 cut(s)	188, 898
Lsp1109I	GCAGC	4 cut(s)	112, 115, 1430, 1501
LweI	GCATC	4 cut(s)	95, 484, 715, 1144
MaeI	CTAG	5 cut(s)	777, 825, 831, 864, 977
MaeII	ACGT	2 cut(s)	12, 438
MaeIII	GTNAC	4 cut(s)	521, 535, 842, 985
MalI	GATC	4 cut(s)	27, 162, 823, 1443
MboI	GATC	4 cut(s)	25, 160, 821, 1441
MflI	RGATCY	1 cut(s)	821
MhlI	GDGCHC	4 cut(s)	209, 415, 454, 905
MlyI	GAGTC	1 cut(s)	467
MmeI	TCCRAC	1 cut(s)	176
Mph1103I	ATGCAT	2 cut(s)	88, 730
MroXI	GAANNNNTTC	1 cut(s)	1398
MseI	TTAA	4 cut(s)	219, 954, 1367, 1469
MslI	CAYNNNNRTG	2 cut(s)	267, 533
MspA1I	CMGCKG	2 cut(s)	106, 766
MspI	CCGG	1 cut(s)	906
MspR9I	CCNGG	1 cut(s)	639
MvaI	CCWGG	1 cut(s)	639
MwoI	GCNNNNNNNGC	3 cut(s)	470, 1191, 1310
NdeI	CATATG	3 cut(s)	557, 741, 1309
NdeII	GATC	4 cut(s)	25, 160, 821, 1441
NlaIII	CATG	4 cut(s)	232, 240, 594, 612
NlaIV	GGNNCC	1 cut(s)	904
NmuCI	GTSAC	2 cut(s)	521, 535
NsbI	TGCGCA	1 cut(s)	474
NsiI	ATGCAT	2 cut(s)	88, 730
NspI	RCATGY	2 cut(s)	594, 612
OliI	CACNNNNGTG	1 cut(s)	267
PaeR7I	CTCGAG	1 cut(s)	208
PciI	ACATGT	1 cut(s)	590
PciSI	GCTCTTC	1 cut(s)	1192
PdmI	GAANNNNTTC	1 cut(s)	1398
PfeI	GAWTC	4 cut(s)	20, 242, 275, 797
PflFI	GACNNNGTC	1 cut(s)	1480
PkrI	GCNGC	4 cut(s)	102, 105, 1420, 1491
PleI	GAGTC	1 cut(s)	466
PpsI	GAGTC	1 cut(s)	466
Ppu21I	YACGTR	1 cut(s)	439
PscI	ACATGT	1 cut(s)	590
PsiI	TTATAA	1 cut(s)	386
Psp6I	CCWGG	1 cut(s)	637
PspFI	CCCAGC	1 cut(s)	503
PspGI	CCWGG	1 cut(s)	637
PspN4I	GGNNCC	1 cut(s)	904
PspXI	VCTCGAGB	1 cut(s)	208
PstNI	CAGNNNCTG	1 cut(s)	106
PsuI	RGATCY	1 cut(s)	821
PsyI	GACNNNGTC	1 cut(s)	1480
PvuII	CAGCTG	2 cut(s)	106, 766
RsaI	GTAC	6 cut(s)	132, 305, 437, 441, 446, 584
RsaNI	GTAC	6 cut(s)	131, 304, 436, 440, 445, 583
RseI	CAYNNNNRTG	2 cut(s)	267, 533
SapI	GCTCTTC	1 cut(s)	1192
SaqAI	TTAA	4 cut(s)	219, 954, 1367, 1469
SatI	GCNGC	4 cut(s)	101, 104, 1419, 1490
Sau3AI	GATC	4 cut(s)	25, 160, 821, 1441
SchI	GAGTC	1 cut(s)	467
ScrFI	CCNGG	1 cut(s)	639
SduI	GDGCHC	4 cut(s)	209, 415, 454, 905
SfaNI	GCATC	4 cut(s)	95, 484, 715, 1144
Sfr274I	CTCGAG	1 cut(s)	208
SlaI	CTCGAG	1 cut(s)	208
SmiMI	CAYNNNNRTG	2 cut(s)	267, 533
SmlI	CTYRAG	3 cut(s)	208, 847, 1234
SmoI	CTYRAG	3 cut(s)	208, 847, 1234
SnaBI	TACGTA	1 cut(s)	439
SsiI	CCGC	4 cut(s)	134, 424, 631, 1138
SspI	AATATT	1 cut(s)	686
SspMI	CTAG	5 cut(s)	777, 825, 831, 864, 977
StyD4I	CCNGG	1 cut(s)	637
StyI	CCWWGG	2 cut(s)	290, 1166
TaaI	ACNGT	4 cut(s)	118, 444, 449, 626
TaiI	ACGT	2 cut(s)	15, 441
TaqI	TCGA	4 cut(s)	28, 209, 578, 1263
TatI	WGTACW	2 cut(s)	303, 444
TfiI	GAWTC	4 cut(s)	20, 242, 275, 797
Tru1I	TTAA	4 cut(s)	219, 954, 1367, 1469
Tru9I	TTAA	4 cut(s)	219, 954, 1367, 1469
TscAI	CASTG	3 cut(s)	454, 459, 629
TseFI	GTSAC	2 cut(s)	521, 535
TseI	GCWGC	4 cut(s)	100, 103, 1418, 1489
Tsp45I	GTSAC	2 cut(s)	521, 535
TspDTI	ATGAA	7 cut(s)	225, 344, 348, 517, 666, 897, 1269
TspRI	CASTG	3 cut(s)	454, 459, 629
Tth111I	GACNNNGTC	1 cut(s)	1480
VneI	GTGCAC	2 cut(s)	411, 450
XapI	RAATTY	2 cut(s)	388, 1331
XbaI	TCTAGA	1 cut(s)	830
XceI	RCATGY	2 cut(s)	594, 612
XcmI	CCANNNNNNNNNTGG	1 cut(s)	182
XhoI	CTCGAG	1 cut(s)	208
XmnI	GAANNNNTTC	1 cut(s)	1398
XspI	CTAG	5 cut(s)	777, 825, 831, 864, 977
Zsp2I	ATGCAT	2 cut(s)	88, 730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.