Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 241 |
| AfaI | GTAC | 3 cut(s) | 41, 484, 630 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 425, 624 |
| AflIII | ACRYGT | 1 cut(s) | 351 |
| AgsI | TTSAA | 1 cut(s) | 559 |
| AhlI | ACTAGT | 1 cut(s) | 604 |
| AjiI | CACGTC | 1 cut(s) | 352 |
| AluBI | AGCT | 2 cut(s) | 158, 281 |
| AluI | AGCT | 2 cut(s) | 158, 281 |
| Alw21I | GWGCWC | 1 cut(s) | 604 |
| Alw26I | GTCTC | 1 cut(s) | 28 |
| Alw44I | GTGCAC | 1 cut(s) | 600 |
| AoxI | GGCC | 1 cut(s) | 241 |
| ApaLI | GTGCAC | 1 cut(s) | 600 |
| ApeKI | GCWGC | 3 cut(s) | 281, 284, 394 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 554 |
| AspLEI | GCGC | 2 cut(s) | 225, 457 |
| AsuHPI | GGTGA | 5 cut(s) | 344, 359, 371, 424, 551 |
| BaeGI | GKGCMC | 1 cut(s) | 604 |
| BalI | TGGCCA | 1 cut(s) | 243 |
| BbsI | GAAGAC | 1 cut(s) | 588 |
| Bbv12I | GWGCWC | 1 cut(s) | 604 |
| BbvI | GCAGC | 3 cut(s) | 268, 271, 381 |
| BccI | CCATC | 3 cut(s) | 331, 359, 590 |
| BcoDI | GTCTC | 1 cut(s) | 28 |
| BcuI | ACTAGT | 1 cut(s) | 604 |
| BfaI | CTAG | 3 cut(s) | 168, 522, 605 |
| BfmI | CTRYAG | 1 cut(s) | 159 |
| BfoI | RGCGCY | 1 cut(s) | 458 |
| BglII | AGATCT | 1 cut(s) | 233 |
| BisI | GCNGC | 3 cut(s) | 282, 285, 395 |
| BlsI | GCNGC | 3 cut(s) | 283, 286, 396 |
| BmgBI | CACGTC | 1 cut(s) | 352 |
| BmsI | GCATC | 2 cut(s) | 360, 532 |
| BpiI | GAAGAC | 1 cut(s) | 588 |
| BpmI | CTGGAG | 1 cut(s) | 479 |
| BpuEI | CTTGAG | 1 cut(s) | 203 |
| BsaAI | YACGTR | 1 cut(s) | 73 |
| BsaJI | CCNNGG | 1 cut(s) | 636 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 425, 624 |
| BseDI | CCNNGG | 1 cut(s) | 636 |
| BseGI | GGATG | 3 cut(s) | 375, 508, 631 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 425, 624 |
| BseMII | CTCAG | 3 cut(s) | 560, 585, 601 |
| BseRI | GAGGAG | 2 cut(s) | 46, 278 |
| BseSI | GKGCMC | 1 cut(s) | 604 |
| BseXI | GCAGC | 3 cut(s) | 268, 271, 381 |
| BshFI | GGCC | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 1 cut(s) | 604 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 425, 624 |
| BsmAI | GTCTC | 1 cut(s) | 28 |
| BsnI | GGCC | 1 cut(s) | 243 |
| Bsp1286I | GDGCHC | 1 cut(s) | 604 |
| Bsp143I | GATC | 3 cut(s) | 138, 233, 574 |
| BspANI | GGCC | 1 cut(s) | 243 |
| BspCNI | CTCAG | 3 cut(s) | 559, 584, 600 |
| BssECI | CCNNGG | 1 cut(s) | 636 |
| BssMI | GATC | 3 cut(s) | 138, 233, 574 |
| BssT1I | CCWWGG | 1 cut(s) | 636 |
| Bst4CI | ACNGT | 2 cut(s) | 39, 163 |
| BstBAI | YACGTR | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 1 cut(s) | 245 |
| BstDEI | CTNAG | 3 cut(s) | 546, 571, 587 |
| BstF5I | GGATG | 3 cut(s) | 375, 508, 631 |
| BstH2I | RGCGCY | 1 cut(s) | 458 |
| BstHHI | GCGC | 2 cut(s) | 225, 457 |
| BstKTI | GATC | 3 cut(s) | 141, 236, 577 |
| BstMAI | GTCTC | 1 cut(s) | 28 |
| BstMBI | GATC | 3 cut(s) | 138, 233, 574 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 76, 214 |
| BstNSI | RCATGY | 1 cut(s) | 155 |
| BstSFI | CTRYAG | 1 cut(s) | 159 |
| BstSLI | GKGCMC | 1 cut(s) | 604 |
| BstV1I | GCAGC | 3 cut(s) | 268, 271, 381 |
| BstV2I | GAAGAC | 1 cut(s) | 588 |
| BstX2I | RGATCY | 1 cut(s) | 233 |
| BstYI | RGATCY | 1 cut(s) | 233 |
| BsuRI | GGCC | 1 cut(s) | 243 |
| BtrI | CACGTC | 1 cut(s) | 352 |
| BtsCI | GGATG | 3 cut(s) | 375, 508, 631 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 1 cut(s) | 245 |
| CfoI | GCGC | 2 cut(s) | 225, 457 |
| Csp6I | GTAC | 3 cut(s) | 40, 483, 629 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 389, 424 |
| CviAII | CATG | 7 cut(s) | 80, 152, 204, 218, 239, 374, 379 |
| CviJI | RGCY | 6 cut(s) | 158, 243, 281, 394, 563, 617 |
| CviKI_1 | RGCY | 6 cut(s) | 158, 243, 281, 394, 563, 617 |
| CviQI | GTAC | 3 cut(s) | 40, 483, 629 |
| DdeI | CTNAG | 3 cut(s) | 546, 571, 587 |
| DpnI | GATC | 3 cut(s) | 140, 235, 576 |
| DpnII | GATC | 3 cut(s) | 138, 233, 574 |
| DraI | TTTAAA | 1 cut(s) | 567 |
| EaeI | YGGCCR | 1 cut(s) | 241 |
| Eco130I | CCWWGG | 1 cut(s) | 636 |
| EcoT14I | CCWWGG | 1 cut(s) | 636 |
| EcoT22I | ATGCAT | 1 cut(s) | 375 |
| ErhI | CCWWGG | 1 cut(s) | 636 |
| FaeI | CATG | 7 cut(s) | 83, 155, 207, 221, 242, 377, 382 |
| FatI | CATG | 7 cut(s) | 79, 151, 203, 217, 238, 373, 378 |
| Fnu4HI | GCNGC | 3 cut(s) | 282, 285, 395 |
| FokI | GGATG | 3 cut(s) | 382, 515, 618 |
| Fsp4HI | GCNGC | 3 cut(s) | 282, 285, 395 |
| FspBI | CTAG | 3 cut(s) | 168, 522, 605 |
| GlaI | GCGC | 2 cut(s) | 224, 456 |
| GluI | GCNGC | 3 cut(s) | 282, 285, 395 |
| GsuI | CTGGAG | 1 cut(s) | 479 |
| HaeII | RGCGCY | 1 cut(s) | 458 |
| HaeIII | GGCC | 1 cut(s) | 243 |
| HhaI | GCGC | 2 cut(s) | 225, 457 |
| Hin1II | CATG | 7 cut(s) | 83, 155, 207, 221, 242, 377, 382 |
| Hin6I | GCGC | 2 cut(s) | 223, 455 |
| HinP1I | GCGC | 2 cut(s) | 223, 455 |
| HinfI | GANTC | 1 cut(s) | 429 |
| HphI | GGTGA | 5 cut(s) | 344, 359, 371, 424, 551 |
| Hpy166II | GTNNAC | 3 cut(s) | 466, 519, 602 |
| Hpy188I | TCNGA | 2 cut(s) | 549, 574 |
| Hpy188III | TCNNGA | 1 cut(s) | 578 |
| Hpy8I | GTNNAC | 3 cut(s) | 466, 519, 602 |
| Hpy99I | CGWCG | 1 cut(s) | 452 |
| HpyAV | CCTTC | 3 cut(s) | 7, 102, 530 |
| HpyCH4III | ACNGT | 2 cut(s) | 39, 163 |
| HpyCH4IV | ACGT | 2 cut(s) | 72, 351 |
| HpyCH4V | TGCA | 5 cut(s) | 70, 151, 373, 498, 602 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 76, 214 |
| HpyF3I | CTNAG | 3 cut(s) | 546, 571, 587 |
| HpySE526I | ACGT | 2 cut(s) | 72, 351 |
| Hsp92II | CATG | 7 cut(s) | 83, 155, 207, 221, 242, 377, 382 |
| HspAI | GCGC | 2 cut(s) | 223, 455 |
| Kzo9I | GATC | 3 cut(s) | 138, 233, 574 |
| LmnI | GCTCC | 1 cut(s) | 488 |
| LpnPI | CCDG | 4 cut(s) | 257, 443, 484, 563 |
| Lsp1109I | GCAGC | 3 cut(s) | 268, 271, 381 |
| LweI | GCATC | 2 cut(s) | 360, 532 |
| MaeI | CTAG | 3 cut(s) | 168, 522, 605 |
| MaeII | ACGT | 2 cut(s) | 72, 351 |
| MaeIII | GTNAC | 2 cut(s) | 163, 347 |
| MalI | GATC | 3 cut(s) | 140, 235, 576 |
| MboI | GATC | 3 cut(s) | 138, 233, 574 |
| MboII | GAAGA | 2 cut(s) | 374, 593 |
| MflI | RGATCY | 1 cut(s) | 233 |
| MhlI | GDGCHC | 1 cut(s) | 604 |
| MlsI | TGGCCA | 1 cut(s) | 243 |
| MluCI | AATT | 2 cut(s) | 270, 307 |
| MluNI | TGGCCA | 1 cut(s) | 243 |
| MlyI | GAGTC | 1 cut(s) | 438 |
| MnlI | CCTC | 8 cut(s) | 24, 77, 256, 259, 454, 466, 505, 596 |
| Mox20I | TGGCCA | 1 cut(s) | 243 |
| Mph1103I | ATGCAT | 1 cut(s) | 375 |
| MroXI | GAANNNNTTC | 1 cut(s) | 554 |
| MscI | TGGCCA | 1 cut(s) | 243 |
| MseI | TTAA | 3 cut(s) | 110, 441, 566 |
| Msp20I | TGGCCA | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 76, 214 |
| NdeII | GATC | 3 cut(s) | 138, 233, 574 |
| NlaIII | CATG | 7 cut(s) | 83, 155, 207, 221, 242, 377, 382 |
| NmuCI | GTSAC | 2 cut(s) | 163, 347 |
| NsiI | ATGCAT | 1 cut(s) | 375 |
| NspI | RCATGY | 1 cut(s) | 155 |
| PdmI | GAANNNNTTC | 1 cut(s) | 554 |
| PkrI | GCNGC | 3 cut(s) | 283, 286, 396 |
| PleI | GAGTC | 1 cut(s) | 437 |
| PpsI | GAGTC | 1 cut(s) | 437 |
| Ppu21I | YACGTR | 1 cut(s) | 73 |
| PsuI | RGATCY | 1 cut(s) | 233 |
| RsaI | GTAC | 3 cut(s) | 41, 484, 630 |
| RsaNI | GTAC | 3 cut(s) | 40, 483, 629 |
| SaqAI | TTAA | 3 cut(s) | 110, 441, 566 |
| SatI | GCNGC | 3 cut(s) | 282, 285, 395 |
| Sau3AI | GATC | 3 cut(s) | 138, 233, 574 |
| SchI | GAGTC | 1 cut(s) | 438 |
| SduI | GDGCHC | 1 cut(s) | 604 |
| SfaNI | GCATC | 2 cut(s) | 360, 532 |
| SfcI | CTRYAG | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| SpeI | ACTAGT | 1 cut(s) | 604 |
| Sse9I | AATT | 2 cut(s) | 270, 307 |
| SspMI | CTAG | 3 cut(s) | 168, 522, 605 |
| StyI | CCWWGG | 1 cut(s) | 636 |
| TaaI | ACNGT | 2 cut(s) | 39, 163 |
| TaiI | ACGT | 2 cut(s) | 75, 354 |
| TaqI | TCGA | 1 cut(s) | 447 |
| TasI | AATT | 2 cut(s) | 270, 307 |
| TatI | WGTACW | 1 cut(s) | 39 |
| Tru1I | TTAA | 3 cut(s) | 110, 441, 566 |
| Tru9I | TTAA | 3 cut(s) | 110, 441, 566 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseFI | GTSAC | 2 cut(s) | 163, 347 |
| TseI | GCWGC | 3 cut(s) | 281, 284, 394 |
| Tsp45I | GTSAC | 2 cut(s) | 163, 347 |
| TspDTI | ATGAA | 2 cut(s) | 53, 627 |
| TspRI | CASTG | 1 cut(s) | 168 |
| VneI | GTGCAC | 1 cut(s) | 600 |
| XceI | RCATGY | 1 cut(s) | 155 |
| XmnI | GAANNNNTTC | 1 cut(s) | 554 |
| XspI | CTAG | 3 cut(s) | 168, 522, 605 |
| Zsp2I | ATGCAT | 1 cut(s) | 375 |