Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000557

Physical Location & Seq

Genomic Coordinates Reverse (-)

43207548 .. 43213810

Gene Structure 6263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG341900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGGAGAGTTAGAAACCCCAGCAGACAAAGAAGGAGATGGAGGTGTTCAGCCTAATACGGAGGCGAGGATGAGCCGGAAGGAGAAGAGGAAAACCATGAAGAAGATGAAGCGGAAGCAGACGAGGAAGGAAATCGCTCTCAAACAGCATGAAGAAGAAGAGGCGAGGCTCCAAGATCCTCAAGAGCTTATCAACATGGAGCAAGAGGAGGCCAAGAGGTCCGAGAGTGTGAGGATCATATTCGAGGAGCGAGAGAGAGCTTGGATTGAAGCCATGGAGATTCGAAAGAAGAAACGAATCGAAGAAGAGGAACGTAGAATTAGCGCTCTGGAATACGAGGAACTATCCCGCAAGCAACAGATCAAAAATGCAAATGATGATGGTGATGATGACTGGGAGTATGTAGAAGAGGGACCTGCTGAAATCATCTGGCAGGAAAATGAAATAACTGTCAAGAAGAAAAGAGTCAAGGTTCCAAAGAGGAATAAAGACCAGCGGAGTATAAAGGAGGATTCTGATCGACCTACATCAAATCCTCTCCCTCCACAATCCGAAGCTTTTGATGATTACAAAAATGCATCTTTATCAGCGCAGCAGCTGTTAGAGACTGTGGCTGAACAAGTACCGCATTTTGGAACTGAACAGGATAAAGATCATTGTCCTTTCCATTTGAAAACTGGAGCTTGTCGGTTTGGTCAGCATTGCAGCCGGGTGCATTTCTACCCGGATAAATCATCCACGCTGCTTATCAAGAACATGTACAATGGTCCTGGCCTTACTTGGGAGCAGGATGAGGGGCTCGAGTACATTGACGAAGAAATTGAGCGCTGTTATGAAGACTTTTATGAGGATGTTCATACAGAGTTCTTGAAGTTCGGAGAAATTATAAATTTCAAGGTGTGCATAAATGGTGCACCCCACTTGCGGGGAAATGTGTACGTACAGTACAGTGCACTGGAGTCAGCTTTGGTTGCGCATCAATCTGTCAATGGTCGCTACTTTGCTGGGAAGCAGATAAGTTGTGACTTCATCAATGTGACCAGATGGAAGGTTGCCATATGTGGGGAATATGTGAAGTCGAGGTACAAGACATGTTCCCGTGGTAGGACATGCAATTTTATCCACTGTTTCCGCAATCCTGGTGGAGAGTATGAATGGGCTGATAGTGATAGGCCACCCCCAAAATATTGGGTGGAAAAGATGGTTGCATTATTTGGTTATTCTGATGCATACAAGAAACATATGATGGAGGATAACTCTGGACAGCTGAGGAACTCTAGCAAGAAGTCAATGACAGATTCACAGAGGTATGTTGTGCAAAGATCTAGTTCTAGAGATGGGAGTTACTCAAGTTTTGCTGGTTCTAGTAGAAGATACGACAATGAAAATTATGCTCCGAAGGGCACCGGCCACCATAGACCTTCAGGTGAAGAGAGCGCTTACTTGAAGGACTTTAATCACAGGAAGAACAGAAAGTATTATATTGAAAGAGTTTCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030628 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

500

Amino Acids

58.55

Weight (kDa)

6.74

Isoelectric Point (pI)

59.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10320 AT1G10320
fragaria_vesca	FvH4_1g01270 FvH4_5g28020
malus_domestica	MD05G1262900.v1.1 MD05G1263000.v1.1 MD15G1442200.v1.1 MD15G1442300.v1.1
prunus_persica	Prupe.1G585000_v2.0.a1
pyrus_communis	pycom05g24740 pycom15g39000
rosa_chinensis	RchiOBHm_Chr1g0376021 RchiOBHm_Chr2g0152801 RchiOBHm_Chr6g0272511 RchiOBHm_Chr6g0272531 RchiOBHm_Chr6g0289931 RchiOBHm_Chr6g0289941 RchiOBHm_Chr6g0302241 RchiOBHm_Chr7g0221381 RchiOBHm_Chr7g0221391 RchiOBHm_Chr7g0221411
rosa_laevigata	RLG00000000942 RLG00000002158 RLG00000013669 RLG00000013670
rosa_multiflora	Rmu_co8352637.1_g000001 Rmu_co8463189.1_g000001 Rmu_sc0000092.1_g000005 Rmu_sc0001575.1_g000019 Rmu_sc0001579.1_g000007 Rmu_sc0002847.1_g000017 Rmu_sc0009283.1_g000001 Rmu_sc0018146.1_g000002 Rmu_sc0026927.1_g000002 Rmu_sc0026927.1_g000003 Rmu_sc0031601.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238370 Rroxscaffold_5G00353980 Rroxscaffold_6G00399580 Rroxscaffold_7G00181850 Rroxscaffold_7G00196190 Rroxscaffold_7G00212980
rosa_rugosa	Rorug02G0202700 Rorug06G0053300 Rorug06G0073400 Rorug06G0208900 Rorug07G0202300 Rorug07G0202300 Rorug07G0202300
rosa_samantha	Rh1AG059200 Rh1AG066100 Rh1AG285800 Rh3AG222700 Rh3DG354600 Rh5BG508200 Rh5BG539300 Rh5BG541200 Rh5CG264600 Rh5CG531900 Rh5CG562800 Rh5CG563900 Rh5DG285300 Rh6AG094100 Rh6AG186000 Rh6AG186100 Rh6AG254700 Rh6BG189200 Rh6BG258000 Rh6CG186900 Rh6CG187000 Rh6DG178300 Rh6DG178700 Rh6DG349500 Rh7AG341800 Rh7AG341900 Rh7AG458600 Rh7BG332500 Rh7CG359600 Rh7DG340200 Rh7DG340300
rosa_wichuraiana	Rw2G036370 Rw6G016030 Rw7G029050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	887
Acc16I	TGCGCA	1 cut(s)	975
Acc36I	ACCTGC	1 cut(s)	424
AccB1I	GGYRCC	1 cut(s)	1403
AciI	CCGC	6 cut(s)	112, 349, 496, 626, 925, 1132
AclWI	GGATC	2 cut(s)	170, 242
AcoI	YGGCCR	1 cut(s)	1408
AcsI	RAATTY	1 cut(s)	889
AcuI	CTGAAG	1 cut(s)	1407
AfaI	GTAC	7 cut(s)	624, 761, 806, 938, 942, 947, 1085
AfeI	AGCGCT	3 cut(s)	325, 827, 1438
AfiI	CCNNNNNNNGG	6 cut(s)	632, 781, 924, 925, 1062, 1104
AflIII	ACRYGT	2 cut(s)	756, 1091
AgsI	TTSAA	7 cut(s)	269, 673, 871, 895, 1447, 1487, 1497
AjnI	CCWGG	2 cut(s)	769, 1138
AluBI	AGCT	7 cut(s)	187, 260, 557, 598, 683, 965, 1267
AluI	AGCT	7 cut(s)	187, 260, 557, 598, 683, 965, 1267
Alw21I	GWGCWC	2 cut(s)	916, 955
Alw26I	GTCTC	1 cut(s)	599
Alw44I	GTGCAC	2 cut(s)	912, 951
AlwI	GGATC	2 cut(s)	170, 242
AlwNI	CAGNNNCTG	1 cut(s)	598
Ama87I	CYCGRG	1 cut(s)	800
Aor51HI	AGCGCT	3 cut(s)	325, 827, 1438
AoxI	GGCC	4 cut(s)	210, 772, 1172, 1408
ApaLI	GTGCAC	2 cut(s)	912, 951
ApeKI	GCWGC	4 cut(s)	592, 595, 705, 742
ApoI	RAATTY	1 cut(s)	889
AspLEI	GCGC	5 cut(s)	326, 592, 828, 976, 1439
AspS9I	GGNCC	3 cut(s)	219, 413, 767
AsuC2I	CCSGG	2 cut(s)	710, 725
AsuHPI	GGTGA	2 cut(s)	395, 1439
AsuII	TTCGAA	1 cut(s)	283
AvaI	CYCGRG	1 cut(s)	800
AvaII	GGWCC	3 cut(s)	219, 413, 767
BaeGI	GKGCMC	3 cut(s)	916, 955, 1406
BanI	GGYRCC	1 cut(s)	1403
BanII	GRGCYC	1 cut(s)	801
BarI	GAAGNNNNNNTAC	2 cut(s)	1067, 1099
BbsI	GAAGAC	1 cut(s)	843
Bbv12I	GWGCWC	2 cut(s)	916, 955
BbvCI	CCTCAGC	1 cut(s)	1268
BbvI	GCAGC	4 cut(s)	604, 607, 717, 729
BccI	CCATC	6 cut(s)	32, 374, 1038, 1195, 1240, 1331
BciT130I	CCWGG	2 cut(s)	771, 1140
BcnI	CCSGG	2 cut(s)	710, 725
BcoDI	GTCTC	1 cut(s)	599
BfaI	CTAG	4 cut(s)	1278, 1326, 1332, 1365
BfoI	RGCGCY	3 cut(s)	327, 829, 1440
BfuAI	ACCTGC	1 cut(s)	424
BglII	AGATCT	1 cut(s)	1322
BisI	GCNGC	4 cut(s)	593, 596, 706, 743
BlsI	GCNGC	4 cut(s)	594, 597, 707, 744
Bme1390I	CCNGG	4 cut(s)	710, 725, 771, 1140
Bme18I	GGWCC	3 cut(s)	219, 413, 767
BmeT110I	CYCGRG	1 cut(s)	800
BmgT120I	GGNCC	3 cut(s)	219, 413, 767
BmiI	GGNNCC	4 cut(s)	170, 414, 474, 1405
BmrFI	CCNGG	4 cut(s)	710, 725, 771, 1140
BmrI	ACTGGG	1 cut(s)	403
BmsI	GCATC	3 cut(s)	587, 985, 1216
BmuI	ACTGGG	1 cut(s)	403
BpiI	GAAGAC	1 cut(s)	843
BplI	GAGNNNNNCTC	2 cut(s)	1241, 1273
BpmI	CTGGAG	2 cut(s)	699, 977
Bpu10I	CCTNAGC	1 cut(s)	1268
Bpu14I	TTCGAA	1 cut(s)	283
BpuEI	CTTGAG	2 cut(s)	165, 1333
BpuMI	CCSGG	2 cut(s)	710, 725
BsaAI	YACGTR	1 cut(s)	940
BsaBI	GATNNNNATC	2 cut(s)	516, 651
BsaJI	CCNNGG	2 cut(s)	273, 1099
Bsc4I	CCNNNNNNNGG	6 cut(s)	632, 781, 924, 925, 1062, 1104
Bse118I	RCCGGY	1 cut(s)	1406
Bse1I	ACTGG	3 cut(s)	398, 682, 960
Bse3DI	GCAATG	1 cut(s)	700
Bse8I	GATNNNNATC	2 cut(s)	516, 651
BseBI	CCWGG	2 cut(s)	771, 1140
BseDI	CCNNGG	2 cut(s)	273, 1099
BseGI	GGATG	4 cut(s)	75, 734, 796, 856
BseJI	GATNNNNATC	2 cut(s)	516, 651
BseLI	CCNNNNNNNGG	6 cut(s)	632, 781, 924, 925, 1062, 1104
BseMI	GCAATG	1 cut(s)	700
BseMII	CTCAG	1 cut(s)	1259
BseNI	ACTGG	3 cut(s)	398, 682, 960
BseRI	GAGGAG	2 cut(s)	221, 260
BseSI	GKGCMC	3 cut(s)	916, 955, 1406
BseXI	GCAGC	4 cut(s)	604, 607, 717, 729
BseYI	CCCAGC	2 cut(s)	19, 1004
BshFI	GGCC	4 cut(s)	212, 774, 1174, 1410
BshNI	GGYRCC	1 cut(s)	1403
BsiHKAI	GWGCWC	2 cut(s)	916, 955
BsiHKCI	CYCGRG	1 cut(s)	800
BsiSI	CCGG	4 cut(s)	76, 709, 725, 1407
BslFI	GGGAC	1 cut(s)	426
BslI	CCNNNNNNNGG	6 cut(s)	632, 781, 924, 925, 1062, 1104
BsmAI	GTCTC	1 cut(s)	599
BsmFI	GGGAC	1 cut(s)	426
BsnI	GGCC	4 cut(s)	212, 774, 1174, 1410
BsoBI	CYCGRG	1 cut(s)	800
Bsp119I	TTCGAA	1 cut(s)	283
Bsp1286I	GDGCHC	4 cut(s)	801, 916, 955, 1406
Bsp1407I	TGTACA	1 cut(s)	759
Bsp143I	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
Bsp19I	CCATGG	1 cut(s)	273
BspACI	CCGC	6 cut(s)	112, 349, 496, 626, 925, 1132
BspANI	GGCC	4 cut(s)	212, 774, 1174, 1410
BspCNI	CTCAG	1 cut(s)	1260
BspLI	GGNNCC	4 cut(s)	170, 414, 474, 1405
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	2 cut(s)	170, 242
BspT104I	TTCGAA	1 cut(s)	283
BspT107I	GGYRCC	1 cut(s)	1403
BsrDI	GCAATG	1 cut(s)	700
BsrFI	RCCGGY	1 cut(s)	1406
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	3 cut(s)	398, 682, 960
BssAI	RCCGGY	1 cut(s)	1406
BssECI	CCNNGG	2 cut(s)	273, 1099
BssMI	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
BssT1I	CCWWGG	1 cut(s)	273
Bst2UI	CCWGG	2 cut(s)	771, 1140
Bst4CI	ACNGT	5 cut(s)	451, 610, 945, 950, 1127
Bst6I	CTCTTC	5 cut(s)	80, 153, 300, 402, 1425
BstAUI	TGTACA	1 cut(s)	759
BstBAI	YACGTR	1 cut(s)	940
BstBI	TTCGAA	1 cut(s)	283
BstC8I	GCNNGC	1 cut(s)	353
BstDEI	CTNAG	1 cut(s)	1268
BstDSI	CCRYGG	2 cut(s)	273, 1099
BstF5I	GGATG	4 cut(s)	75, 734, 796, 856
BstH2I	RGCGCY	3 cut(s)	327, 829, 1440
BstHHI	GCGC	5 cut(s)	326, 592, 828, 976, 1439
BstKTI	GATC	6 cut(s)	178, 237, 363, 520, 655, 1325
BstMAI	GTCTC	1 cut(s)	599
BstMBI	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
BstMWI	GCNNNNNNNGC	1 cut(s)	971
BstNI	CCWGG	2 cut(s)	771, 1140
BstNSI	RCATGY	3 cut(s)	760, 1095, 1113
BstSCI	CCNGG	4 cut(s)	708, 723, 769, 1138
BstSLI	GKGCMC	3 cut(s)	916, 955, 1406
BstSNI	TACGTA	1 cut(s)	940
BstV1I	GCAGC	4 cut(s)	604, 607, 717, 729
BstV2I	GAAGAC	1 cut(s)	843
BstX2I	RGATCY	2 cut(s)	175, 1322
BstXI	CCANNNNNNTGG	1 cut(s)	1188
BstYI	RGATCY	2 cut(s)	175, 1322
BsuRI	GGCC	4 cut(s)	212, 774, 1174, 1410
BtgI	CCRYGG	2 cut(s)	273, 1099
BtsCI	GGATG	4 cut(s)	75, 734, 796, 856
BtsIMutI	CAGTG	3 cut(s)	953, 955, 1123
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	1 cut(s)	353
CaiI	CAGNNNCTG	1 cut(s)	598
CfoI	GCGC	5 cut(s)	326, 592, 828, 976, 1439
Cfr10I	RCCGGY	1 cut(s)	1406
Cfr13I	GGNCC	3 cut(s)	219, 413, 767
Csp6I	GTAC	7 cut(s)	623, 760, 805, 937, 941, 946, 1084
CspCI	CAANNNNNGTGG	2 cut(s)	1123, 1158
CviAII	CATG	7 cut(s)	97, 149, 196, 274, 757, 1092, 1110
CviQI	GTAC	7 cut(s)	623, 760, 805, 937, 941, 946, 1084
DdeI	CTNAG	1 cut(s)	1268
DpnI	GATC	6 cut(s)	177, 236, 362, 519, 654, 1324
DpnII	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
EaeI	YGGCCR	1 cut(s)	1408
Eam1104I	CTCTTC	5 cut(s)	80, 153, 300, 402, 1425
EarI	CTCTTC	5 cut(s)	80, 153, 300, 402, 1425
Eco105I	TACGTA	1 cut(s)	940
Eco130I	CCWWGG	1 cut(s)	273
Eco24I	GRGCYC	1 cut(s)	801
Eco47I	GGWCC	3 cut(s)	219, 413, 767
Eco47III	AGCGCT	3 cut(s)	325, 827, 1438
Eco57I	CTGAAG	1 cut(s)	1407
Eco88I	CYCGRG	1 cut(s)	800
EcoO109I	RGGNCCY	1 cut(s)	413
EcoRII	CCWGG	2 cut(s)	769, 1138
EcoT14I	CCWWGG	1 cut(s)	273
EcoT22I	ATGCAT	2 cut(s)	580, 1231
EcoT38I	GRGCYC	1 cut(s)	801
ErhI	CCWWGG	1 cut(s)	273
FaeI	CATG	7 cut(s)	100, 152, 199, 277, 760, 1095, 1113
FaqI	GGGAC	1 cut(s)	426
FatI	CATG	7 cut(s)	96, 148, 195, 273, 756, 1091, 1109
FauI	CCCGC	2 cut(s)	356, 918
FauNDI	CATATG	2 cut(s)	1058, 1242
Fnu4HI	GCNGC	4 cut(s)	593, 596, 706, 743
FokI	GGATG	4 cut(s)	82, 721, 803, 863
FriOI	GRGCYC	1 cut(s)	801
Fsp4HI	GCNGC	4 cut(s)	593, 596, 706, 743
FspBI	CTAG	4 cut(s)	1278, 1326, 1332, 1365
FspI	TGCGCA	1 cut(s)	975
GlaI	GCGC	5 cut(s)	325, 591, 827, 975, 1438
GluI	GCNGC	4 cut(s)	593, 596, 706, 743
GsaI	CCCAGC	2 cut(s)	23, 1008
GsuI	CTGGAG	2 cut(s)	699, 977
HaeII	RGCGCY	3 cut(s)	327, 829, 1440
HaeIII	GGCC	4 cut(s)	212, 774, 1174, 1410
HapII	CCGG	4 cut(s)	76, 709, 725, 1407
HhaI	GCGC	5 cut(s)	326, 592, 828, 976, 1439
Hin1II	CATG	7 cut(s)	100, 152, 199, 277, 760, 1095, 1113
Hin6I	GCGC	5 cut(s)	324, 590, 826, 974, 1437
HinP1I	GCGC	5 cut(s)	324, 590, 826, 974, 1437
HindIII	AAGCTT	1 cut(s)	555
HinfI	GANTC	6 cut(s)	280, 297, 465, 512, 959, 1298
HpaII	CCGG	4 cut(s)	76, 709, 725, 1407
HphI	GGTGA	2 cut(s)	395, 1439
Hpy166II	GTNNAC	3 cut(s)	914, 937, 953
Hpy188I	TCNGA	6 cut(s)	223, 517, 553, 878, 1225, 1398
Hpy188III	TCNNGA	8 cut(s)	182, 329, 454, 751, 868, 1260, 1332, 1497
Hpy8I	GTNNAC	3 cut(s)	914, 937, 953
HpyAV	CCTTC	7 cut(s)	26, 73, 121, 1042, 1393, 1431, 1441
HpyCH4III	ACNGT	5 cut(s)	451, 610, 945, 950, 1127
HpyCH4IV	ACGT	2 cut(s)	313, 939
HpyF10VI	GCNNNNNNNGC	1 cut(s)	971
HpyF3I	CTNAG	1 cut(s)	1268
HpySE526I	ACGT	2 cut(s)	313, 939
Hsp92II	CATG	7 cut(s)	100, 152, 199, 277, 760, 1095, 1113
HspAI	GCGC	5 cut(s)	324, 590, 826, 974, 1437
Kzo9I	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
LmnI	GCTCC	6 cut(s)	174, 199, 247, 680, 784, 1399
Lsp1109I	GCAGC	4 cut(s)	604, 607, 717, 729
LweI	GCATC	3 cut(s)	587, 985, 1216
MaeI	CTAG	4 cut(s)	1278, 1326, 1332, 1365
MaeII	ACGT	2 cut(s)	313, 939
MaeIII	GTNAC	3 cut(s)	1022, 1036, 1343
MalI	GATC	6 cut(s)	177, 236, 362, 519, 654, 1324
MboI	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
MflI	RGATCY	2 cut(s)	175, 1322
MhlI	GDGCHC	4 cut(s)	801, 916, 955, 1406
MluCI	AATT	6 cut(s)	318, 819, 882, 889, 1114, 1387
MlyI	GAGTC	2 cut(s)	474, 968
Mph1103I	ATGCAT	2 cut(s)	580, 1231
MseI	TTAA	1 cut(s)	1455
MslI	CAYNNNNRTG	1 cut(s)	1034
MspA1I	CMGCKG	3 cut(s)	496, 598, 1267
MspI	CCGG	4 cut(s)	76, 709, 725, 1407
MspR9I	CCNGG	4 cut(s)	710, 725, 771, 1140
MvaI	CCWGG	2 cut(s)	771, 1140
MwoI	GCNNNNNNNGC	1 cut(s)	971
NciI	CCSGG	2 cut(s)	710, 725
NcoI	CCATGG	1 cut(s)	273
NdeI	CATATG	2 cut(s)	1058, 1242
NdeII	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
NlaIII	CATG	7 cut(s)	100, 152, 199, 277, 760, 1095, 1113
NlaIV	GGNNCC	4 cut(s)	170, 414, 474, 1405
NmuCI	GTSAC	2 cut(s)	1022, 1036
NsbI	TGCGCA	1 cut(s)	975
NsiI	ATGCAT	2 cut(s)	580, 1231
NspI	RCATGY	3 cut(s)	760, 1095, 1113
NspV	TTCGAA	1 cut(s)	283
PaeR7I	CTCGAG	1 cut(s)	800
PciI	ACATGT	2 cut(s)	756, 1091
PfeI	GAWTC	4 cut(s)	280, 297, 512, 1298
PkrI	GCNGC	4 cut(s)	594, 597, 707, 744
PleI	GAGTC	2 cut(s)	473, 967
PpsI	GAGTC	2 cut(s)	473, 967
Ppu21I	YACGTR	1 cut(s)	940
PpuMI	RGGWCCY	1 cut(s)	413
PscI	ACATGT	2 cut(s)	756, 1091
PsiI	TTATAA	1 cut(s)	887
Psp5II	RGGWCCY	1 cut(s)	413
Psp6I	CCWGG	2 cut(s)	769, 1138
PspFI	CCCAGC	2 cut(s)	19, 1004
PspGI	CCWGG	2 cut(s)	769, 1138
PspN4I	GGNNCC	4 cut(s)	170, 414, 474, 1405
PspPI	GGNCC	3 cut(s)	219, 413, 767
PspPPI	RGGWCCY	1 cut(s)	413
PspXI	VCTCGAGB	1 cut(s)	800
PstNI	CAGNNNCTG	1 cut(s)	598
PsuI	RGATCY	2 cut(s)	175, 1322
PvuII	CAGCTG	2 cut(s)	598, 1267
RsaI	GTAC	7 cut(s)	624, 761, 806, 938, 942, 947, 1085
RsaNI	GTAC	7 cut(s)	623, 760, 805, 937, 941, 946, 1084
RseI	CAYNNNNRTG	1 cut(s)	1034
SaqAI	TTAA	1 cut(s)	1455
SatI	GCNGC	4 cut(s)	593, 596, 706, 743
Sau3AI	GATC	6 cut(s)	175, 234, 360, 517, 652, 1322
Sau96I	GGNCC	3 cut(s)	219, 413, 767
SchI	GAGTC	2 cut(s)	474, 968
ScrFI	CCNGG	4 cut(s)	710, 725, 771, 1140
SduI	GDGCHC	4 cut(s)	801, 916, 955, 1406
SfaNI	GCATC	3 cut(s)	587, 985, 1216
Sfr274I	CTCGAG	1 cut(s)	800
SfuI	TTCGAA	1 cut(s)	283
SinI	GGWCC	3 cut(s)	219, 413, 767
SlaI	CTCGAG	1 cut(s)	800
SmiMI	CAYNNNNRTG	1 cut(s)	1034
SmlI	CTYRAG	3 cut(s)	180, 800, 1348
SmoI	CTYRAG	3 cut(s)	180, 800, 1348
SnaBI	TACGTA	1 cut(s)	940
Sse9I	AATT	6 cut(s)	318, 819, 882, 889, 1114, 1387
SsiI	CCGC	6 cut(s)	112, 349, 496, 626, 925, 1132
SspI	AATATT	1 cut(s)	1187
SspMI	CTAG	4 cut(s)	1278, 1326, 1332, 1365
StyD4I	CCNGG	4 cut(s)	708, 723, 769, 1138
StyI	CCWWGG	1 cut(s)	273
TaaI	ACNGT	5 cut(s)	451, 610, 945, 950, 1127
TaiI	ACGT	2 cut(s)	316, 942
TaqI	TCGA	6 cut(s)	243, 283, 300, 520, 801, 1079
TasI	AATT	6 cut(s)	318, 819, 882, 889, 1114, 1387
TatI	WGTACW	3 cut(s)	759, 804, 945
TfiI	GAWTC	4 cut(s)	280, 297, 512, 1298
Tru1I	TTAA	1 cut(s)	1455
Tru9I	TTAA	1 cut(s)	1455
TscAI	CASTG	3 cut(s)	955, 960, 1130
TseFI	GTSAC	2 cut(s)	1022, 1036
TseI	GCWGC	4 cut(s)	592, 595, 705, 742
Tsp45I	GTSAC	2 cut(s)	1022, 1036
TspDTI	ATGAA	9 cut(s)	113, 122, 165, 456, 845, 849, 1018, 1167, 1398
TspGWI	ACGGA	1 cut(s)	74
TspRI	CASTG	3 cut(s)	955, 960, 1130
VneI	GTGCAC	2 cut(s)	912, 951
VpaK11BI	GGWCC	3 cut(s)	219, 413, 767
XapI	RAATTY	1 cut(s)	889
XbaI	TCTAGA	1 cut(s)	1331
XceI	RCATGY	3 cut(s)	760, 1095, 1113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	674
XhoI	CTCGAG	1 cut(s)	800
XspI	CTAG	4 cut(s)	1278, 1326, 1332, 1365
Zsp2I	ATGCAT	2 cut(s)	580, 1231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.