Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000557

Physical Location & Seq

Genomic Coordinates Forward (+)

47482548 .. 47491814

Gene Structure 9267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G585000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

ATGATGGACCTGGCAGACCCAGTAGCCAAAGAAGGAGAAGCAGATGCTGAGCCTAAAATGGAACGTTTAGCAGAAGAGAAAGGGACGAATAGGAAGGAGAAGAGGAAGGCAATGAAGAAGATGAAGAGGAAGCAGACGAGAAAGGAGATGGCGCTGAAAGAGCGAGAGGAAGAAGAGGCAATACTCAATGACCCTCAAGAGCTTATGAAAATTAAGCTGATGGAGCAAGAGGAGGCCGAGAGGTCAGAGAGAGAGAGGAAGCTGTTCGAGGAGCGAGAGAGAGCGTGGATCGAAGCCATGGAGATTAAGAGGAAGAAACAAATTGAAGAAGAAGAAGAAGAAGAGGAACGGAGAATGAAGGCTCTAGAAGAAGAAGAATTGTCTCGGAAACAACAGGTTGAAAATGAAAATGACAGTAATGAGGTTGATGATTGGGACTATATAGAAGAAGGGCCTGCTGAAATCATCTGGCAAGGAAATGAGATAATTGTCAAGAAGAAAAGGATCAAGGTTCCAAAGAGGAACACAGACCAGCAAAGTAGAAAGGAGGATTGTGATAGGCCCACGTCAAATCCTCTCCCTCCGCAATCTGAAGCATTTTCTGATTATAAAAATTCATCAATGTCAGCACAGCAGCTGATTGAGAATGTTGCTCAACAAGTACCCCATTTTGGAACTGAACAGGATAAAGCTCATTGTCCTTTTCATTTGAAAACTGGGGCTTGTCGGTTTGGTCAGCGTTGTAGCAGAGTCCATTTCTACCCAGATAAATCATCCACACTGCTTATCAAGAACATGTACAATGGTCCTGGACTTGCTTGGGAACAGGATGAGGTGCTGGAGCATACTGATGAGGAGGTAGAGCGCTGTTATGAAGAATTTTATGAGGATGTGCATACAGAGTTCTTGAAGTTTGGTGAAATTATAAATTTCAAGGTTTGCAGAAATGGTGCATTCCACTTGAGGGGAAACGTGTACATACACTATAAATCACTGGATTCAGCTGTGCTTGCACATCAATCTATCAATGGTCGCTACTTTGCTGGGAAGCAGATAAGTTGCGAATTTATCAATGTGACCAGATGGAAGGTTGCCATATGTGGGGAATATATGAAGTCGAGGTACAAGACGTGTTCCCATGGTACAGCTTGCAATTTTATCCACTGTTTCCGAAATCCTGGTGGAGACTATGAATGGGGTGATAGCGATAGACCGGCTCCAAAATATTGGGTGAGGAAAATGGTCGCTTTATTTGGTTATTCTGATGCAGACGAGAAACAGATGGTAGAGGAAAATTTTGGACGGCTGAGGAACTTTAGCAAGATGACAATGGCAGATTCTGAGAGGTACGGGTTGCGAAGATCTAGATCTAGAGGGAGGGATTACTCAAGTTTCATTGGTTCTGGTAGAAGATATGACAGTGAAGATTATGTTTTAGAGGATGCAGAACGACAGAGGCATACAGGTGATGATAGACATCGAGGAAAAACTCTTGATGAGGATCGATGTGAAGAGAATAAGAACTTAAAAGACTATCATTGTAGGAAGAGCAGAAGGTCTGATACTGAATTTGATAGACAGTTGTTGGATAGGGAAGAGGACAGAGATAGACACCATGGTCACACAAGGAAAAGCTCAAGACAACAAAACAGGGACCACAAGAACAAAACCTATGAAACTGAATCTGACGGAGATTTGTCTGATAGGGCACGGAACAGAGTAGCACAGCATGGTTGCACCAGGGAAAGCTCAAGCCAACAGCGGAAAGGAGAATTCCTGGATGAATATGGAGATTGGCAGAACAAAAATCATGAAGTTGATAGGGATTGGTCAGATAGGGACAAAGACATAGATGCATACCAAGACAACAGGAAAAGTTCAGGACACAAGAGGAAAGTGGGATGTCCAGATAATCATAATGACAGCAAGAACAGAGCACATGATATGGATGAAGAGTGGTCAGACAGCAACAGCAAAGGTGGCAAGCACCACAGTAGGAGGAAAAGATTCGGACACATTAGCAAAGCTTCTGAATTCTCAAATCACAGGGAGAGAACCACCAGGTCTTGTAGTTATGAACTTAGTGATGATTTGTTGGAAAATGATGCAGAAAGAAACCTTAGTCATGCTAGGAAACGATCAAAACGCTTGGATGAAGTGTCAGATATTTCAGATGAGGGTCGAGTCCCGACACAGAATTTGGAACATAGACATGATCGTCTGAGCCTAGAGATGAGAGAAGCAGAGGCTCTTGTTAAAAAATTGAAGTCAGATGGAACCCACGAGTCCAGCAGTTTGGGTCAAGATGGTGAGAGATATAGATCACATGATTTTGATATAAGATGCATATCTGATGTACACATGGACAAACAGGATCGCTGGGAACCTGAAGATGGTTCTGTTGAGATATTTCATAATTCTAAAACGAAAGCTGGAAGTTCAGAGAGTTATGAGTCTGGCAGGCCAGGTCCATATAATGTAAGAGGTGAATCAAGTGATTTTGATTCAGAAGATAAAGTTAGCCAGGAAGATCAATATGAATCTGACAAGGTAGCTCATTCAAAACACCGGAAATCAAGGAGAAAGTCTACACACGACAATCGCAAGCGTGACAGTGAAAACAGATCACTGTGTAGCAGCCAATCAAGCCATAGGAGACATTCCAATAGATTGGAGGCCACTGATTCATCTGAAGATAACAACGAATCTGGAAGGAAACACAACCAGAAGCACCATGCAGATCATAGATCTCGTGATCACAAACGAGATCATAAAAGCAGGAGGTTAGCCACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030628 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

932

Amino Acids

109.74

Weight (kDa)

6.43

Isoelectric Point (pI)

61.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10320 AT1G10320
fragaria_vesca	FvH4_1g01270 FvH4_5g28020
malus_domestica	MD05G1262900.v1.1 MD05G1263000.v1.1 MD15G1442200.v1.1 MD15G1442300.v1.1
prunus_persica	Prupe.1G585000_v2.0.a1
pyrus_communis	pycom05g24740 pycom15g39000
rosa_chinensis	RchiOBHm_Chr1g0376021 RchiOBHm_Chr2g0152801 RchiOBHm_Chr6g0272511 RchiOBHm_Chr6g0272531 RchiOBHm_Chr6g0289931 RchiOBHm_Chr6g0289941 RchiOBHm_Chr6g0302241 RchiOBHm_Chr7g0221381 RchiOBHm_Chr7g0221391 RchiOBHm_Chr7g0221411
rosa_laevigata	RLG00000000942 RLG00000002158 RLG00000013669 RLG00000013670
rosa_multiflora	Rmu_co8352637.1_g000001 Rmu_co8463189.1_g000001 Rmu_sc0000092.1_g000005 Rmu_sc0001575.1_g000019 Rmu_sc0001579.1_g000007 Rmu_sc0002847.1_g000017 Rmu_sc0009283.1_g000001 Rmu_sc0018146.1_g000002 Rmu_sc0026927.1_g000002 Rmu_sc0026927.1_g000003 Rmu_sc0031601.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238370 Rroxscaffold_5G00353980 Rroxscaffold_6G00399580 Rroxscaffold_7G00181850 Rroxscaffold_7G00196190 Rroxscaffold_7G00212980
rosa_rugosa	Rorug02G0202700 Rorug06G0053300 Rorug06G0073400 Rorug06G0208900 Rorug07G0202300 Rorug07G0202300 Rorug07G0202300
rosa_samantha	Rh1AG059200 Rh1AG066100 Rh1AG285800 Rh3AG222700 Rh3DG354600 Rh5BG508200 Rh5BG539300 Rh5BG541200 Rh5CG264600 Rh5CG531900 Rh5CG562800 Rh5CG563900 Rh5DG285300 Rh6AG094100 Rh6AG186000 Rh6AG186100 Rh6AG254700 Rh6BG189200 Rh6BG258000 Rh6CG186900 Rh6CG187000 Rh6DG178300 Rh6DG178700 Rh6DG349500 Rh7AG341800 Rh7AG341900 Rh7AG458600 Rh7BG332500 Rh7CG359600 Rh7DG340200 Rh7DG340300
rosa_wichuraiana	Rw2G036370 Rw6G016030 Rw7G029050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	609, 926
AasI	GACNNNNNNGTC	2 cut(s)	1617, 2217
AccI	GTMKAC	1 cut(s)	2588
AciI	CCGC	2 cut(s)	584, 1762
AclI	AACGTT	1 cut(s)	64
AclWI	GGATC	4 cut(s)	296, 512, 1509, 2382
AcsI	RAATTY	9 cut(s)	613, 878, 928, 1064, 1294, 1568, 1772, 2033, 2197
AcuI	CTGAAG	3 cut(s)	612, 2409, 2712
AcvI	CACGTG	1 cut(s)	2793
AfaI	GTAC	7 cut(s)	663, 800, 977, 1124, 1144, 1349, 2358
AfeI	AGCGCT	1 cut(s)	866
AfiI	CCNNNNNNNGG	4 cut(s)	671, 964, 1101, 2393
AflIII	ACRYGT	3 cut(s)	795, 972, 1130
AgsI	TTSAA	7 cut(s)	326, 401, 712, 910, 934, 2266, 2562
AjiI	CACGTC	2 cut(s)	567, 1131
AjnI	CCWGG	8 cut(s)	9, 808, 1177, 1739, 1776, 2060, 2464, 2523
Alw21I	GWGCWC	1 cut(s)	1939
Alw26I	GTCTC	3 cut(s)	387, 1179, 2650
AlwI	GGATC	4 cut(s)	296, 512, 1509, 2382
AlwNI	CAGNNNCTG	3 cut(s)	47, 637, 1340
Aor51HI	AGCGCT	1 cut(s)	866
AoxI	GGCC	5 cut(s)	234, 452, 560, 2462, 2676
ApeKI	GCWGC	2 cut(s)	634, 2637
ApoI	RAATTY	9 cut(s)	613, 878, 928, 1064, 1294, 1568, 1772, 2033, 2197
ArsI	GACNNNNNNTTYG	2 cut(s)	2182, 2214
Asp700I	GAANNNNTTC	2 cut(s)	263, 2006
AspLEI	GCGC	2 cut(s)	154, 867
AspS9I	GGNCC	6 cut(s)	7, 452, 561, 806, 1654, 2468
AsuHPI	GGTGA	6 cut(s)	929, 1211, 1243, 1478, 2321, 2498
AvaII	GGWCC	4 cut(s)	7, 806, 1654, 2468
BaeGI	GKGCMC	1 cut(s)	1711
BarI	GAAGNNNNNNTAC	6 cut(s)	165, 197, 1106, 1138, 1546, 1578
BauI	CACGAG	2 cut(s)	2282, 2751
BbrPI	CACGTG	1 cut(s)	2793
Bbv12I	GWGCWC	1 cut(s)	1939
BbvCI	CCTCAGC	1 cut(s)	1307
BbvI	GCAGC	2 cut(s)	646, 2649
BccI	CCATC	7 cut(s)	142, 214, 1077, 1276, 2267, 2300, 2387
BceAI	ACGGC	1 cut(s)	1319
BciT130I	CCWGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
BclI	TGATCA	1 cut(s)	2755
BcoDI	GTCTC	3 cut(s)	387, 1179, 2650
BfaI	CTAG	5 cut(s)	365, 1365, 1371, 2130, 2228
BfoI	RGCGCY	2 cut(s)	155, 868
BglII	AGATCT	3 cut(s)	1361, 1367, 2747
BisI	GCNGC	2 cut(s)	635, 2638
BlpI	GCTNAGC	1 cut(s)	48
BlsI	GCNGC	2 cut(s)	636, 2639
Bme1390I	CCNGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
Bme18I	GGWCC	4 cut(s)	7, 806, 1654, 2468
BmgBI	CACGTC	2 cut(s)	567, 1131
BmgT120I	GGNCC	6 cut(s)	7, 452, 561, 806, 1654, 2468
BmiI	GGNNCC	5 cut(s)	513, 1218, 1655, 2278, 2385
BmrFI	CCNGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
BmrI	ACTGGG	2 cut(s)	14, 726
BmsI	GCATC	6 cut(s)	34, 1255, 1432, 1843, 2095, 2333
BmuI	ACTGGG	2 cut(s)	14, 726
BpmI	CTGGAG	1 cut(s)	860
Bpu10I	CCTNAGC	1 cut(s)	1307
Bpu1102I	GCTNAGC	1 cut(s)	48
BpuEI	CTTGAG	5 cut(s)	180, 982, 1372, 1621, 1735
Bsa29I	ATCGAT	1 cut(s)	1504
BsaAI	YACGTR	1 cut(s)	2793
BsaBI	GATNNNNATC	5 cut(s)	1366, 1476, 1500, 2320, 2347
BsaJI	CCNNGG	4 cut(s)	297, 1138, 1615, 1740
BsaWI	WCCGGW	1 cut(s)	2568
Bsc4I	CCNNNNNNNGG	4 cut(s)	671, 964, 1101, 2393
Bse118I	RCCGGY	1 cut(s)	1213
Bse1I	ACTGG	3 cut(s)	20, 721, 999
Bse3DI	GCAATG	1 cut(s)	117
Bse8I	GATNNNNATC	5 cut(s)	1366, 1476, 1500, 2320, 2347
BseBI	CCWGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
BseCI	ATCGAT	1 cut(s)	1504
BseDI	CCNNGG	4 cut(s)	297, 1138, 1615, 1740
BseGI	GGATG	8 cut(s)	773, 835, 895, 1447, 1786, 1907, 1954, 2158
BseJI	GATNNNNATC	5 cut(s)	1366, 1476, 1500, 2320, 2347
BseLI	CCNNNNNNNGG	4 cut(s)	671, 964, 1101, 2393
BseMI	GCAATG	1 cut(s)	117
BseMII	CTCAG	4 cut(s)	39, 1298, 1332, 2213
BseNI	ACTGG	3 cut(s)	20, 721, 999
BseRI	GAGGAG	3 cut(s)	245, 284, 869
BseSI	GKGCMC	1 cut(s)	1711
BseXI	GCAGC	2 cut(s)	646, 2649
BseYI	CCCAGC	2 cut(s)	1043, 2379
BshFI	GGCC	5 cut(s)	236, 454, 562, 2464, 2678
BshVI	ATCGAT	1 cut(s)	1504
BsiHKAI	GWGCWC	1 cut(s)	1939
BsiSI	CCGG	2 cut(s)	1214, 2569
BslFI	GGGAC	5 cut(s)	97, 449, 1667, 1853, 2171
BslI	CCNNNNNNNGG	4 cut(s)	671, 964, 1101, 2393
BsmAI	GTCTC	3 cut(s)	387, 1179, 2650
BsmFI	GGGAC	5 cut(s)	97, 449, 1667, 1853, 2171
BsmI	GAATGC	1 cut(s)	953
BsnI	GGCC	5 cut(s)	236, 454, 562, 2464, 2678
Bsp1286I	GDGCHC	2 cut(s)	1711, 1939
Bsp1407I	TGTACA	3 cut(s)	798, 975, 2356
Bsp1720I	GCTNAGC	1 cut(s)	48
Bsp19I	CCATGG	3 cut(s)	297, 1138, 1615
BspACI	CCGC	2 cut(s)	584, 1762
BspANI	GGCC	5 cut(s)	236, 454, 562, 2464, 2678
BspCNI	CTCAG	4 cut(s)	40, 1299, 1333, 2214
BspDI	ATCGAT	1 cut(s)	1504
BspHI	TCATGA	1 cut(s)	1810
BspLI	GGNNCC	5 cut(s)	513, 1218, 1655, 2278, 2385
BspPI	GGATC	4 cut(s)	296, 512, 1509, 2382
BspQI	GCTCTTC	1 cut(s)	1541
BsrDI	GCAATG	1 cut(s)	117
BsrFI	RCCGGY	1 cut(s)	1213
BsrGI	TGTACA	3 cut(s)	798, 975, 2356
BsrI	ACTGG	3 cut(s)	20, 721, 999
BssAI	RCCGGY	1 cut(s)	1213
BssECI	CCNNGG	4 cut(s)	297, 1138, 1615, 1740
BssSI	CACGAG	2 cut(s)	2282, 2751
BssT1I	CCWWGG	3 cut(s)	297, 1138, 1615
Bst2BI	CACGAG	2 cut(s)	2282, 2751
Bst2UI	CCWGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
Bst4CI	ACNGT	7 cut(s)	416, 1166, 1421, 1581, 1994, 2615, 2631
Bst6I	CTCTTC	9 cut(s)	69, 95, 119, 168, 336, 1506, 1541, 1590, 1947
BstAUI	TGTACA	3 cut(s)	798, 975, 2356
BstBAI	YACGTR	1 cut(s)	2793
BstC8I	GCNNGC	6 cut(s)	456, 1011, 1150, 1985, 2462, 2606
BstDEI	CTNAG	6 cut(s)	48, 1307, 1341, 2081, 2120, 2222
BstDSI	CCRYGG	3 cut(s)	297, 1138, 1615
BstF5I	GGATG	8 cut(s)	773, 835, 895, 1447, 1786, 1907, 1954, 2158
BstH2I	RGCGCY	2 cut(s)	155, 868
BstHHI	GCGC	2 cut(s)	154, 867
BstMAI	GTCTC	3 cut(s)	387, 1179, 2650
BstMWI	GCNNNNNNNGC	5 cut(s)	160, 223, 1010, 1980, 2646
BstNI	CCWGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
BstNSI	RCATGY	1 cut(s)	799
BstSCI	CCNGG	8 cut(s)	9, 808, 1177, 1739, 1776, 2060, 2464, 2523
BstSLI	GKGCMC	1 cut(s)	1711
BstV1I	GCAGC	2 cut(s)	646, 2649
BstX2I	RGATCY	3 cut(s)	1361, 1367, 2747
BstXI	CCANNNNNNTGG	3 cut(s)	1227, 2296, 2671
BstYI	RGATCY	3 cut(s)	1361, 1367, 2747
Bsu15I	ATCGAT	1 cut(s)	1504
BsuRI	GGCC	5 cut(s)	236, 454, 562, 2464, 2678
BsuTUI	ATCGAT	1 cut(s)	1504
BtgI	CCRYGG	3 cut(s)	297, 1138, 1615
BtrI	CACGTC	2 cut(s)	567, 1131
BtsCI	GGATG	8 cut(s)	773, 835, 895, 1447, 1786, 1907, 1954, 2158
BtsI	GCAGTG	1 cut(s)	779
BtsIMutI	CAGTG	7 cut(s)	779, 992, 1162, 1426, 2620, 2627, 2679
Cac8I	GCNNGC	6 cut(s)	456, 1011, 1150, 1985, 2462, 2606
CaiI	CAGNNNCTG	3 cut(s)	47, 637, 1340
CciI	TCATGA	1 cut(s)	1810
CfoI	GCGC	2 cut(s)	154, 867
Cfr10I	RCCGGY	1 cut(s)	1213
Cfr13I	GGNCC	6 cut(s)	7, 452, 561, 806, 1654, 2468
ClaI	ATCGAT	1 cut(s)	1504
CsiI	ACCWGGT	1 cut(s)	2060
Csp6I	GTAC	7 cut(s)	662, 799, 976, 1123, 1143, 1348, 2357
CviQI	GTAC	7 cut(s)	662, 799, 976, 1123, 1143, 1348, 2357
DdeI	CTNAG	6 cut(s)	48, 1307, 1341, 2081, 2120, 2222
DrdI	GACNNNNNNGTC	2 cut(s)	1617, 2217
DseDI	GACNNNNNNGTC	2 cut(s)	1617, 2217
Eam1104I	CTCTTC	9 cut(s)	69, 95, 119, 168, 336, 1506, 1541, 1590, 1947
EarI	CTCTTC	9 cut(s)	69, 95, 119, 168, 336, 1506, 1541, 1590, 1947
Eco130I	CCWWGG	3 cut(s)	297, 1138, 1615
Eco47I	GGWCC	4 cut(s)	7, 806, 1654, 2468
Eco47III	AGCGCT	1 cut(s)	866
Eco57I	CTGAAG	3 cut(s)	612, 2409, 2712
Eco72I	CACGTG	1 cut(s)	2793
EcoO109I	RGGNCCY	1 cut(s)	452
EcoRI	GAATTC	2 cut(s)	1772, 2033
EcoRII	CCWGG	8 cut(s)	9, 808, 1177, 1739, 1776, 2060, 2464, 2523
EcoT14I	CCWWGG	3 cut(s)	297, 1138, 1615
EcoT22I	ATGCAT	2 cut(s)	1858, 2348
ErhI	CCWWGG	3 cut(s)	297, 1138, 1615
FaqI	GGGAC	5 cut(s)	97, 449, 1667, 1853, 2171
FauNDI	CATATG	1 cut(s)	1097
FbaI	TGATCA	1 cut(s)	2755
FblI	GTMKAC	1 cut(s)	2588
Fnu4HI	GCNGC	2 cut(s)	635, 2638
FokI	GGATG	8 cut(s)	760, 842, 902, 1454, 1793, 1914, 1961, 2165
Fsp4HI	GCNGC	2 cut(s)	635, 2638
FspBI	CTAG	5 cut(s)	365, 1365, 1371, 2130, 2228
GlaI	GCGC	2 cut(s)	153, 866
GluI	GCNGC	2 cut(s)	635, 2638
GsaI	CCCAGC	2 cut(s)	1047, 2383
GsuI	CTGGAG	1 cut(s)	860
HaeII	RGCGCY	2 cut(s)	155, 868
HaeIII	GGCC	5 cut(s)	236, 454, 562, 2464, 2678
HapII	CCGG	2 cut(s)	1214, 2569
HhaI	GCGC	2 cut(s)	154, 867
Hin6I	GCGC	2 cut(s)	152, 865
HinP1I	GCGC	2 cut(s)	152, 865
HindIII	AAGCTT	1 cut(s)	2025
HpaII	CCGG	2 cut(s)	1214, 2569
HphI	GGTGA	6 cut(s)	929, 1211, 1243, 1478, 2321, 2498
Hpy166II	GTNNAC	3 cut(s)	976, 2359, 2589
Hpy8I	GTNNAC	3 cut(s)	976, 2359, 2589
HpyAV	CCTTC	8 cut(s)	26, 88, 100, 352, 443, 1081, 1548, 2706
HpyCH4III	ACNGT	7 cut(s)	416, 1166, 1421, 1581, 1994, 2615, 2631
HpyCH4IV	ACGT	5 cut(s)	64, 566, 972, 1130, 2792
HpyF10VI	GCNNNNNNNGC	5 cut(s)	160, 223, 1010, 1980, 2646
HpyF3I	CTNAG	6 cut(s)	48, 1307, 1341, 2081, 2120, 2222
HpySE526I	ACGT	5 cut(s)	64, 566, 972, 1130, 2792
HspAI	GCGC	2 cut(s)	152, 865
Ksp22I	TGATCA	1 cut(s)	2755
LguI	GCTCTTC	1 cut(s)	1541
LmnI	GCTCC	4 cut(s)	223, 271, 841, 1222
Lsp1109I	GCAGC	2 cut(s)	646, 2649
LweI	GCATC	6 cut(s)	34, 1255, 1432, 1843, 2095, 2333
MabI	ACCWGGT	1 cut(s)	2060
MaeI	CTAG	5 cut(s)	365, 1365, 1371, 2130, 2228
MaeII	ACGT	5 cut(s)	64, 566, 972, 1130, 2792
MaeIII	GTNAC	3 cut(s)	1075, 1619, 2609
MflI	RGATCY	3 cut(s)	1361, 1367, 2747
MhlI	GDGCHC	2 cut(s)	1711, 1939
MlyI	GAGTC	4 cut(s)	759, 2193, 2294, 2462
MmeI	TCCRAC	2 cut(s)	1566, 2076
Mph1103I	ATGCAT	2 cut(s)	1858, 2348
MroXI	GAANNNNTTC	2 cut(s)	263, 2006
MseI	TTAA	4 cut(s)	213, 306, 1526, 2256
MslI	CAYNNNNRTG	3 cut(s)	849, 1464, 2211
MspA1I	CMGCKG	3 cut(s)	637, 1004, 1762
MspI	CCGG	2 cut(s)	1214, 2569
MspR9I	CCNGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
Mva1269I	GAATGC	1 cut(s)	953
MvaI	CCWGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
MwoI	GCNNNNNNNGC	5 cut(s)	160, 223, 1010, 1980, 2646
NcoI	CCATGG	3 cut(s)	297, 1138, 1615
NdeI	CATATG	1 cut(s)	1097
NlaIV	GGNNCC	5 cut(s)	513, 1218, 1655, 2278, 2385
NmeAIII	GCCGAG	1 cut(s)	262
NmuCI	GTSAC	3 cut(s)	1075, 1619, 2609
NsiI	ATGCAT	2 cut(s)	1858, 2348
NspI	RCATGY	1 cut(s)	799
PagI	TCATGA	1 cut(s)	1810
PciI	ACATGT	1 cut(s)	795
PciSI	GCTCTTC	1 cut(s)	1541
PctI	GAATGC	1 cut(s)	953
PdmI	GAANNNNTTC	2 cut(s)	263, 2006
PfeI	GAWTC	9 cut(s)	998, 1337, 1682, 2007, 2489, 2504, 2540, 2684, 2705
PfoI	TCCNGGA	2 cut(s)	808, 1776
PkrI	GCNGC	2 cut(s)	636, 2639
PleI	GAGTC	4 cut(s)	758, 2192, 2293, 2461
PmaCI	CACGTG	1 cut(s)	2793
PmlI	CACGTG	1 cut(s)	2793
PpsI	GAGTC	4 cut(s)	758, 2192, 2293, 2461
Ppu21I	YACGTR	1 cut(s)	2793
PscI	ACATGT	1 cut(s)	795
PsiI	TTATAA	2 cut(s)	609, 926
Psp1406I	AACGTT	1 cut(s)	64
Psp6I	CCWGG	8 cut(s)	9, 808, 1177, 1739, 1776, 2060, 2464, 2523
PspCI	CACGTG	1 cut(s)	2793
PspFI	CCCAGC	2 cut(s)	1043, 2379
PspGI	CCWGG	8 cut(s)	9, 808, 1177, 1739, 1776, 2060, 2464, 2523
PspN4I	GGNNCC	5 cut(s)	513, 1218, 1655, 2278, 2385
PspPI	GGNCC	6 cut(s)	7, 452, 561, 806, 1654, 2468
PstNI	CAGNNNCTG	3 cut(s)	47, 637, 1340
PsuI	RGATCY	3 cut(s)	1361, 1367, 2747
PvuII	CAGCTG	2 cut(s)	637, 1004
RsaI	GTAC	7 cut(s)	663, 800, 977, 1124, 1144, 1349, 2358
RsaNI	GTAC	7 cut(s)	662, 799, 976, 1123, 1143, 1348, 2357
RseI	CAYNNNNRTG	3 cut(s)	849, 1464, 2211
SapI	GCTCTTC	1 cut(s)	1541
SaqAI	TTAA	4 cut(s)	213, 306, 1526, 2256
SatI	GCNGC	2 cut(s)	635, 2638
Sau96I	GGNCC	6 cut(s)	7, 452, 561, 806, 1654, 2468
SchI	GAGTC	4 cut(s)	759, 2193, 2294, 2462
ScrFI	CCNGG	8 cut(s)	11, 810, 1179, 1741, 1778, 2062, 2466, 2525
SduI	GDGCHC	2 cut(s)	1711, 1939
SexAI	ACCWGGT	1 cut(s)	2060
SfaNI	GCATC	6 cut(s)	34, 1255, 1432, 1843, 2095, 2333
SinI	GGWCC	4 cut(s)	7, 806, 1654, 2468
SmiMI	CAYNNNNRTG	3 cut(s)	849, 1464, 2211
SmlI	CTYRAG	5 cut(s)	195, 961, 1387, 1636, 1750
SmoI	CTYRAG	5 cut(s)	195, 961, 1387, 1636, 1750
SsiI	CCGC	2 cut(s)	584, 1762
SspI	AATATT	1 cut(s)	1226
SspMI	CTAG	5 cut(s)	365, 1365, 1371, 2130, 2228
StyD4I	CCNGG	8 cut(s)	9, 808, 1177, 1739, 1776, 2060, 2464, 2523
StyI	CCWWGG	3 cut(s)	297, 1138, 1615
TaaI	ACNGT	7 cut(s)	416, 1166, 1421, 1581, 1994, 2615, 2631
TaiI	ACGT	5 cut(s)	67, 569, 975, 1133, 2795
TaqI	TCGA	6 cut(s)	267, 291, 1118, 1480, 1504, 2182
TatI	WGTACW	3 cut(s)	798, 975, 2356
TfiI	GAWTC	9 cut(s)	998, 1337, 1682, 2007, 2489, 2504, 2540, 2684, 2705
Tru1I	TTAA	4 cut(s)	213, 306, 1526, 2256
Tru9I	TTAA	4 cut(s)	213, 306, 1526, 2256
TscAI	CASTG	7 cut(s)	786, 999, 1169, 1426, 2620, 2634, 2686
TseFI	GTSAC	3 cut(s)	1075, 1619, 2609
TseI	GCWGC	2 cut(s)	634, 2637
Tsp45I	GTSAC	3 cut(s)	1075, 1619, 2609
TspGWI	ACGGA	3 cut(s)	364, 1704, 1726
TspRI	CASTG	7 cut(s)	786, 999, 1169, 1426, 2620, 2634, 2686
VpaK11BI	GGWCC	4 cut(s)	7, 806, 1654, 2468
XapI	RAATTY	9 cut(s)	613, 878, 928, 1064, 1294, 1568, 1772, 2033, 2197
XbaI	TCTAGA	3 cut(s)	364, 1364, 1370
XceI	RCATGY	1 cut(s)	799
XmiI	GTMKAC	1 cut(s)	2588
XmnI	GAANNNNTTC	2 cut(s)	263, 2006
XspI	CTAG	5 cut(s)	365, 1365, 1371, 2130, 2228
Zsp2I	ATGCAT	2 cut(s)	1858, 2348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.