oxidation-reduction process
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| adh_short | PF00106 | 15 - 49 | 2.9e-07 | short chain dehydrogenase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 141, 215 |
| Acc65I | GGTACC | 1 cut(s) | 19 |
| AccB1I | GGYRCC | 2 cut(s) | 19, 62 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 165 |
| AccII | CGCG | 1 cut(s) | 94 |
| AciI | CCGC | 3 cut(s) | 66, 72, 170 |
| AclWI | GGATC | 1 cut(s) | 233 |
| AcoI | YGGCCR | 3 cut(s) | 3, 48, 167 |
| AcyI | GRCGYC | 3 cut(s) | 63, 138, 212 |
| AfaI | GTAC | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 43, 165 |
| AluBI | AGCT | 3 cut(s) | 34, 116, 244 |
| AluI | AGCT | 3 cut(s) | 34, 116, 244 |
| Alw21I | GWGCWC | 1 cut(s) | 118 |
| AlwI | GGATC | 1 cut(s) | 233 |
| AoxI | GGCC | 4 cut(s) | 3, 48, 156, 167 |
| ApeKI | GCWGC | 2 cut(s) | 172, 191 |
| AscI | GGCGCGCC | 1 cut(s) | 92 |
| Asp718I | GGTACC | 1 cut(s) | 19 |
| AspLEI | GCGC | 3 cut(s) | 65, 94, 96 |
| AspS9I | GGNCC | 1 cut(s) | 156 |
| AsuHPI | GGTGA | 4 cut(s) | 49, 92, 139, 207 |
| AsuNHI | GCTAGC | 1 cut(s) | 68 |
| BalI | TGGCCA | 1 cut(s) | 50 |
| BanI | GGYRCC | 2 cut(s) | 19, 62 |
| BanII | GRGCYC | 1 cut(s) | 118 |
| Bbv12I | GWGCWC | 1 cut(s) | 118 |
| BbvI | GCAGC | 2 cut(s) | 178, 184 |
| BccI | CCATC | 2 cut(s) | 59, 115 |
| BceAI | ACGGC | 2 cut(s) | 55, 105 |
| BfaI | CTAG | 1 cut(s) | 69 |
| BfoI | RGCGCY | 1 cut(s) | 66 |
| BisI | GCNGC | 5 cut(s) | 66, 73, 170, 173, 192 |
| BlsI | GCNGC | 5 cut(s) | 67, 74, 171, 174, 193 |
| BmgT120I | GGNCC | 1 cut(s) | 156 |
| BmiI | GGNNCC | 3 cut(s) | 21, 64, 183 |
| BmsI | GCATC | 1 cut(s) | 84 |
| BmtI | GCTAGC | 1 cut(s) | 72 |
| BsaBI | GATNNNNATC | 1 cut(s) | 224 |
| BsaHI | GRCGYC | 3 cut(s) | 63, 138, 212 |
| BsaJI | CCNNGG | 4 cut(s) | 6, 37, 109, 152 |
| BsaWI | WCCGGW | 1 cut(s) | 16 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 43, 165 |
| Bse118I | RCCGGY | 1 cut(s) | 59 |
| Bse3DI | GCAATG | 1 cut(s) | 204 |
| Bse8I | GATNNNNATC | 1 cut(s) | 224 |
| BseDI | CCNNGG | 4 cut(s) | 6, 37, 109, 152 |
| BseGI | GGATG | 2 cut(s) | 126, 200 |
| BseJI | GATNNNNATC | 1 cut(s) | 224 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 43, 165 |
| BseMI | GCAATG | 1 cut(s) | 204 |
| BsePI | GCGCGC | 1 cut(s) | 92 |
| BseRI | GAGGAG | 1 cut(s) | 23 |
| BseXI | GCAGC | 2 cut(s) | 178, 184 |
| BsgI | GTGCAG | 1 cut(s) | 177 |
| Bsh1236I | CGCG | 1 cut(s) | 94 |
| Bsh1285I | CGRYCG | 1 cut(s) | 189 |
| BshFI | GGCC | 4 cut(s) | 5, 50, 158, 169 |
| BshNI | GGYRCC | 2 cut(s) | 19, 62 |
| BsiEI | CGRYCG | 1 cut(s) | 189 |
| BsiHKAI | GWGCWC | 1 cut(s) | 118 |
| BsiSI | CCGG | 2 cut(s) | 17, 60 |
| BslFI | GGGAC | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 43, 165 |
| BsmFI | GGGAC | 1 cut(s) | 125 |
| BsnI | GGCC | 4 cut(s) | 5, 50, 158, 169 |
| Bsp1286I | GDGCHC | 1 cut(s) | 118 |
| Bsp143I | GATC | 3 cut(s) | 129, 186, 225 |
| Bsp19I | CCATGG | 1 cut(s) | 152 |
| BspACI | CCGC | 3 cut(s) | 66, 72, 170 |
| BspANI | GGCC | 4 cut(s) | 5, 50, 158, 169 |
| BspFNI | CGCG | 1 cut(s) | 94 |
| BspLI | GGNNCC | 3 cut(s) | 21, 64, 183 |
| BspOI | GCTAGC | 1 cut(s) | 72 |
| BspPI | GGATC | 1 cut(s) | 233 |
| BspT107I | GGYRCC | 2 cut(s) | 19, 62 |
| BsrDI | GCAATG | 1 cut(s) | 204 |
| BsrFI | RCCGGY | 1 cut(s) | 59 |
| BssAI | RCCGGY | 1 cut(s) | 59 |
| BssECI | CCNNGG | 4 cut(s) | 6, 37, 109, 152 |
| BssHII | GCGCGC | 1 cut(s) | 92 |
| BssMI | GATC | 3 cut(s) | 129, 186, 225 |
| BssNI | GRCGYC | 3 cut(s) | 63, 138, 212 |
| BssT1I | CCWWGG | 1 cut(s) | 152 |
| BstACI | GRCGYC | 3 cut(s) | 63, 138, 212 |
| BstC8I | GCNNGC | 2 cut(s) | 70, 94 |
| BstDSI | CCRYGG | 3 cut(s) | 37, 109, 152 |
| BstF5I | GGATG | 2 cut(s) | 126, 200 |
| BstFNI | CGCG | 1 cut(s) | 94 |
| BstH2I | RGCGCY | 1 cut(s) | 66 |
| BstHHI | GCGC | 3 cut(s) | 65, 94, 96 |
| BstKTI | GATC | 3 cut(s) | 132, 189, 228 |
| BstMBI | GATC | 3 cut(s) | 129, 186, 225 |
| BstMCI | CGRYCG | 1 cut(s) | 189 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 69, 188 |
| BstUI | CGCG | 1 cut(s) | 94 |
| BstV1I | GCAGC | 2 cut(s) | 178, 184 |
| BsuRI | GGCC | 4 cut(s) | 5, 50, 158, 169 |
| BtgI | CCRYGG | 3 cut(s) | 37, 109, 152 |
| BtsCI | GGATG | 2 cut(s) | 126, 200 |
| Cac8I | GCNNGC | 2 cut(s) | 70, 94 |
| CfoI | GCGC | 3 cut(s) | 65, 94, 96 |
| Cfr10I | RCCGGY | 1 cut(s) | 59 |
| Cfr13I | GGNCC | 1 cut(s) | 156 |
| Csp6I | GTAC | 1 cut(s) | 20 |
| CviAII | CATG | 1 cut(s) | 153 |
| CviJI | RGCY | 9 cut(s) | 5, 34, 50, 104, 116, 158, 169, 182, 244 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 34, 50, 104, 116, 158, 169, 182, 244 |
| CviQI | GTAC | 1 cut(s) | 20 |
| DinI | GGCGCC | 1 cut(s) | 64 |
| DpnI | GATC | 3 cut(s) | 131, 188, 227 |
| DpnII | GATC | 3 cut(s) | 129, 186, 225 |
| EaeI | YGGCCR | 3 cut(s) | 3, 48, 167 |
| Ecl136II | GAGCTC | 1 cut(s) | 116 |
| Eco130I | CCWWGG | 1 cut(s) | 152 |
| Eco24I | GRGCYC | 1 cut(s) | 118 |
| Eco53kI | GAGCTC | 1 cut(s) | 116 |
| EcoICRI | GAGCTC | 1 cut(s) | 116 |
| EcoT14I | CCWWGG | 1 cut(s) | 152 |
| EcoT38I | GRGCYC | 1 cut(s) | 118 |
| EgeI | GGCGCC | 1 cut(s) | 64 |
| EheI | GGCGCC | 1 cut(s) | 64 |
| ErhI | CCWWGG | 1 cut(s) | 152 |
| FaeI | CATG | 1 cut(s) | 156 |
| FaiI | YATR | 1 cut(s) | 154 |
| FaqI | GGGAC | 1 cut(s) | 125 |
| FatI | CATG | 1 cut(s) | 152 |
| Fnu4HI | GCNGC | 5 cut(s) | 66, 73, 170, 173, 192 |
| FokI | GGATG | 2 cut(s) | 133, 187 |
| FriOI | GRGCYC | 1 cut(s) | 118 |
| Fsp4HI | GCNGC | 5 cut(s) | 66, 73, 170, 173, 192 |
| FspBI | CTAG | 1 cut(s) | 69 |
| GlaI | GCGC | 3 cut(s) | 64, 93, 95 |
| GluI | GCNGC | 5 cut(s) | 66, 73, 170, 173, 192 |
| HaeII | RGCGCY | 1 cut(s) | 66 |
| HaeIII | GGCC | 4 cut(s) | 5, 50, 158, 169 |
| HapII | CCGG | 2 cut(s) | 17, 60 |
| HhaI | GCGC | 3 cut(s) | 65, 94, 96 |
| Hin1I | GRCGYC | 3 cut(s) | 63, 138, 212 |
| Hin1II | CATG | 1 cut(s) | 156 |
| Hin6I | GCGC | 3 cut(s) | 63, 92, 94 |
| HinP1I | GCGC | 3 cut(s) | 63, 92, 94 |
| HinfI | GANTC | 1 cut(s) | 13 |
| HpaII | CCGG | 2 cut(s) | 17, 60 |
| HphI | GGTGA | 4 cut(s) | 49, 92, 139, 207 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 186 |
| Hpy99I | CGWCG | 2 cut(s) | 140, 214 |
| HpyCH4IV | ACGT | 2 cut(s) | 138, 212 |
| HpyCH4V | TGCA | 1 cut(s) | 194 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 69, 188 |
| HpySE526I | ACGT | 2 cut(s) | 138, 212 |
| Hsp92I | GRCGYC | 3 cut(s) | 63, 138, 212 |
| Hsp92II | CATG | 1 cut(s) | 156 |
| HspAI | GCGC | 3 cut(s) | 63, 92, 94 |
| KasI | GGCGCC | 1 cut(s) | 62 |
| KpnI | GGTACC | 1 cut(s) | 23 |
| Kzo9I | GATC | 3 cut(s) | 129, 186, 225 |
| LmnI | GCTCC | 3 cut(s) | 39, 113, 187 |
| LpnPI | CCDG | 3 cut(s) | 30, 73, 214 |
| Lsp1109I | GCAGC | 2 cut(s) | 178, 184 |
| LweI | GCATC | 1 cut(s) | 84 |
| MaeI | CTAG | 1 cut(s) | 69 |
| MaeII | ACGT | 2 cut(s) | 138, 212 |
| MaeIII | GTNAC | 3 cut(s) | 55, 85, 213 |
| MalI | GATC | 3 cut(s) | 131, 188, 227 |
| MboI | GATC | 3 cut(s) | 129, 186, 225 |
| MhlI | GDGCHC | 1 cut(s) | 118 |
| MlsI | TGGCCA | 1 cut(s) | 50 |
| MluNI | TGGCCA | 1 cut(s) | 50 |
| Mly113I | GGCGCC | 1 cut(s) | 63 |
| MnlI | CCTC | 1 cut(s) | 216 |
| Mox20I | TGGCCA | 1 cut(s) | 50 |
| MscI | TGGCCA | 1 cut(s) | 50 |
| Msp20I | TGGCCA | 1 cut(s) | 50 |
| MspI | CCGG | 2 cut(s) | 17, 60 |
| MvnI | CGCG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 69, 188 |
| NarI | GGCGCC | 1 cut(s) | 63 |
| NcoI | CCATGG | 1 cut(s) | 152 |
| NdeII | GATC | 3 cut(s) | 129, 186, 225 |
| NheI | GCTAGC | 1 cut(s) | 68 |
| NlaIII | CATG | 1 cut(s) | 156 |
| NlaIV | GGNNCC | 3 cut(s) | 21, 64, 183 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 3 cut(s) | 55, 85, 213 |
| PalAI | GGCGCGCC | 1 cut(s) | 92 |
| PauI | GCGCGC | 1 cut(s) | 92 |
| PfeI | GAWTC | 1 cut(s) | 13 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 165 |
| PkrI | GCNGC | 5 cut(s) | 67, 74, 171, 174, 193 |
| Ple19I | CGATCG | 1 cut(s) | 189 |
| PluTI | GGCGCC | 1 cut(s) | 66 |
| Psp124BI | GAGCTC | 1 cut(s) | 118 |
| PspN4I | GGNNCC | 3 cut(s) | 21, 64, 183 |
| PspPI | GGNCC | 1 cut(s) | 156 |
| PteI | GCGCGC | 1 cut(s) | 92 |
| PvuI | CGATCG | 1 cut(s) | 189 |
| RsaI | GTAC | 1 cut(s) | 21 |
| RsaNI | GTAC | 1 cut(s) | 20 |
| SacI | GAGCTC | 1 cut(s) | 118 |
| SatI | GCNGC | 5 cut(s) | 66, 73, 170, 173, 192 |
| Sau3AI | GATC | 3 cut(s) | 129, 186, 225 |
| Sau96I | GGNCC | 1 cut(s) | 156 |
| SduI | GDGCHC | 1 cut(s) | 118 |
| SetI | ASST | 8 cut(s) | 36, 48, 118, 141, 199, 215, 233, 246 |
| SfaNI | GCATC | 1 cut(s) | 84 |
| SfoI | GGCGCC | 1 cut(s) | 64 |
| SgrAI | CRCCGGYG | 1 cut(s) | 59 |
| SgsI | GGCGCGCC | 1 cut(s) | 92 |
| SsiI | CCGC | 3 cut(s) | 66, 72, 170 |
| SspDI | GGCGCC | 1 cut(s) | 62 |
| SspMI | CTAG | 1 cut(s) | 69 |
| SstI | GAGCTC | 1 cut(s) | 118 |
| StyI | CCWWGG | 1 cut(s) | 152 |
| TaiI | ACGT | 2 cut(s) | 141, 215 |
| TauI | GCSGC | 3 cut(s) | 68, 75, 172 |
| TfiI | GAWTC | 1 cut(s) | 13 |
| TseFI | GTSAC | 3 cut(s) | 55, 85, 213 |
| TseI | GCWGC | 2 cut(s) | 172, 191 |
| Tsp45I | GTSAC | 3 cut(s) | 55, 85, 213 |
| TspGWI | ACGGA | 1 cut(s) | 126 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 165 |
| XspI | CTAG | 1 cut(s) | 69 |
| ZraI | GACGTC | 2 cut(s) | 139, 213 |