Rorug07G0313300

oxidation-reduction process

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000222
Physical Location & Seq
Forward (+)
31467150 .. 31469626
2477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0313300.1

Sequence Viewer

Length: 2427 bp
ATGGAAGTTCCCAAGTTTTTCCTCCTTTTGCTATTTGCAGCAACATTTGCTCAGAGTCAAGAACGGTTACAAGGGATGCCAAGATTAAGGAAAGGGAACTCCTTGAAAGTTGAGGAGGAGACCAACGTCTTGGTTTCACCAGATGGAACTTTTTCTAGTGGATTTTACAAAGTTGGTGCCAATGCCTCCTGTTATTCAATATGGTTCACCAATAGTGCCAATAAAACAATTGTCTGGATGGCTAACAGAGACAAGCCTGTGAGCAAAAGAGGCTCAAAGCTAACCCTCCATGGAAGTGGCAACCTAGTTTTGACAGATGCACTTGGTACACTCGTGTGGTCGACCAACACAATCTCTAATGAAGACATGGAAGTTGTGCTTCTTGACACAGGAAATTTGGTGCTGAGGAATCAAGCAAAGAGGGTAATCTGGCAAAGTTTTGATTCTCCCACAGATACACTTTTACCAACACAGCCACTCACCAAGAACACAACCTTGGTGTCCATGAGAAGCCAAGGTACATACTTATCCGGGTTCTATAACTTCAAATTCGACGATAACAATGTCTTGTTTCTCATCTACAATGGCCCTCAACTTTCTAGTGTTTATTGGCCCCGGATTATTCCAAGTGTTTTTGAAAGTGGTAGAAATCCTTACAACAGCTCTAGGGTGGCAAGTTTAGATGTGGCTGGACAATTTATATCTAGTGACAATATGCAGTTCAATGCATCTGACTACGGGGTTGGTCCAAAGCGGCGTCTAACGGTGGATTATGATGGCATCTTAAGACTGTACAGTCTTCATGAATCGACAGGGTTGTGGAAACTGTCATGGTTGCCTGATGGTGTTGATGCATGCCGGGTTCAGGGCTTGTGCGGTGAATATGGTATTTGCACATACAAACCACAACCTACTTGTACCTGCCCTTCGGGGTTTTCCCTAAACGATCCCTCAGACTGGTCCAAAGGCTGCTCACCACCCTTCAATTTGACTCAACTCACTCAAGATACAAGCAAGCTGGATTTCCTGGAGCTTCCTTACACAGATTACTATGGATATGACATGGCAACCTATACTCGTGGAATCTCTTTTGAAGCATGCAGGAATTCATGTCTAATGCATTCAAGTTGCTTGGGATTCGGATATGCGCTGGATGGGATCGGAGAATGTTATCCCAAGAGTCTTCTGCTTAATGGATATCGTATGTCGAATGTTAAGAGCATCATCCATGTAAAGATTCCAAAAGGTTATCTGAACCCTGGTGCAGTCCAAAGCAGACTAGAAGCACATGATTCGAACTGTTCAGCGGCACAATTTGTTGTAAGTACTGATCTCGAAACAGAAAAGGGCAATGGAAACCAGTACATGAAATACCTCATTGAATTTTTGAGTTCCTTTGGGCTAATTGAAGCAATCAGCATCAGTTTGACATGGTGGTTTGTGTTCCGAAAGCAAGCTCGTGACGAAATGATGAACATGGGGTATATGGCATTAGCCATAAATGCTGTGGGATTCAAAAGTTTCACCTATGCAGAACTAAAGAAAGCAACCAATGACTTCAAACAGGAGATAGGAAAAGGGGGGTTCGGCAGAGTCTATAAAGGGATTCTGGATGGTGACAGAGTTGTAGCTGTGAAGAGACTAGAAGGCATTGTACAAGGAGATGCAGAGTTTTGGGCAGAGGTTAGTGTCATAGGGAATATCAACCACAGGAACTTGGTTAAGCTTTGGGGTTTCTGTGCTGAGAATGAACATAAGCTGTTGGTATATGAGTATCTGGAGAATGGATCCTTGGATAAACTCTTGTTTTCTGATGTTGAATTAGGATTGGAGCAGAGATACAATATTGCATTAGGCACTGCAAAGGGTTTGTCATATCTACATGAGGAGTGTCTGGAATGGGTACTCCACTGTGATGTAAAGCCTCAAAATATACTGTTAGATGACCATCTTGAACCTAAGGTGGCAGATTTTGGCATGTCAAAGTTATTCAAAGTCAACATTGAAGATGCAGGCATTGGATTTTCGAGAGTTCGAGGCACCAGAGGTTATATGGCTCCAGAGTGGATGGTGAACCTTAAAATTGATGCAAAGGCAGATGTCTACAGCTATGGGATTGTTTTGTTGGAGCTACTGAGTGGAAAGAGTGCATCTATTCTACTTTCAGCTTTTGCACAAGAGTACACTGAGCACAACCAACTGGTACAATGTGTGACTGAAAAGATCAGAGTCGAAGGGCTTAAGGAAGTGATTGATCCTAGACTCTATCATAATTTCAACAAGAAGAAGCTCGAAAGATTGATGAAGGTTGCTCTTCTGTGTGTGCAAGAAGACCGCAGTGCAAGACCTGCCATGAGCAAGGTTGTAGAGCTTCTACTTGAGAATGATGAGGGAAGAGTAGATGATGAAGAATTGAAGATCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
adh_short_C2

Protein Analysis

808

Amino Acids

90.72

Weight (kDa)

5.88

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 164 5.1e-26 D-mannose binding lectin
S_locus_glycop PF00954 251 - 313 2.3e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 520 - 792 1.2e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 521 - 789 9.3e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000222)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01600 FvH4_3g23770 FvH4_3g23780 FvH4_5g15540 FvH4_5g15550 FvH4_5g15560 FvH4_5g36480 FvH4_5g36490 FvH4_5g36512 FvH4_5g36520 FvH4_5g36540
malus_domestica MD06G1187400.v1.1 MD14G1193800.v1.1 MD15G1376500.v1.1
prunus_persica Prupe.5G029400_v2.0.a1 Prupe.5G185600_v2.0.a1 Prupe.5G185700_v2.0.a1
pyrus_communis pycom06g16640 pycom06g16650 pycom06g16660 pycom06g16670 pycom14g16120 pycom15g33650
rosa_chinensis RchiOBHm_Chr7g0180541 RchiOBHm_Chr7g0180551 RchiOBHm_Chr7g0234561 RchiOBHm_Chr7g0238411 RchiOBHm_Chr7g0238441 RchiOBHm_Chr7g0238501 RchiOBHm_Chr7g0238561 RchiOBHm_Chr7g0238571 RchiOBHm_Chr7g0238601 RchiOBHm_Chr7g0242071 RchiOBHm_Chr7g0242111 RchiOBHm_Chr7g0242121 RchiOBHm_Chr7g0242181 RchiOBHm_Chr7g0242191 RchiOBHm_Chr7g0242201 RchiOBHm_Chr7g0242221 RchiOBHm_Chr7g0242291 RchiOBHm_Chr7g0242301
rosa_laevigata RLG00000000902 RLG00000000905 RLG00000000907 RLG00000000908 RLG00000000912 RLG00000005257 RLG00000005259 RLG00000035265
rosa_multiflora Rmu_co8004978.1_g000001 Rmu_co8126788.1_g000001 Rmu_co8332817.1_g000001 Rmu_sc0000429.1_g000001 Rmu_sc0000429.1_g000005 Rmu_sc0000429.1_g000010 Rmu_sc0000429.1_g000017 Rmu_sc0000429.1_g000022 Rmu_sc0000429.1_g000023 Rmu_sc0000429.1_g000030 Rmu_sc0001371.1_g000029 Rmu_sc0001428.1_g000008 Rmu_sc0001428.1_g000012 Rmu_sc0001428.1_g000023 Rmu_sc0001428.1_g000024 Rmu_sc0001536.1_g000009 Rmu_sc0001536.1_g000015 Rmu_sc0003321.1_g000025 Rmu_sc0003322.1_g000017 Rmu_sc0005690.1_g000011 Rmu_sc0005690.1_g000015 Rmu_sc0007123.1_g000006 Rmu_sc0023798.1_g000003 Rmu_sc0025040.1_g000003
rosa_roxburghii Rroxscaffold_3G00222860 Rroxscaffold_3G00222910 Rroxscaffold_3G00222930 Rroxscaffold_3G00222970 Rroxscaffold_3G00272800 Rroxscaffold_3G00272810
rosa_rugosa Rorug06G0433300 Rorug06G0433400 Rorug06G0433400 Rorug07G0312500 Rorug07G0312900 Rorug07G0313300 Rorug07G0313400 Rorug07G0313700 Rorug07G0314100 Rorug07G0314200 Rorug07G0314700
rosa_samantha Rh5DG534900 Rh6BG486700 Rh6CG490700 Rh7AG034600 Rh7AG035000 Rh7AG467300 Rh7AG467400 Rh7AG467700 Rh7AG467800 Rh7AG468100 Rh7AG468800 Rh7AG468900 Rh7AG469100 Rh7AG469200 Rh7AG469400 Rh7AG469500 Rh7AG469600 Rh7AG470000 Rh7AG470100 Rh7BG034600 Rh7BG034700 Rh7BG034900 Rh7BG438400 Rh7BG438800 Rh7BG439000 Rh7BG439100 Rh7BG439300 Rh7BG439400 Rh7BG439800 Rh7CG036300 Rh7CG036500 Rh7CG199800 Rh7CG485400 Rh7CG485800 Rh7CG486000 Rh7CG486100 Rh7CG486200 Rh7CG486600 Rh7CG486700 Rh7DG034900 Rh7DG035200 Rh7DG453900 Rh7DG454300 Rh7DG454400 Rh7DG454500 Rh7DG454600 Rh7DG455000 Rh7DG455100
rosa_wichuraiana Rw0G009440 Rw0G009460 Rw7G002870 Rw7G038750 Rw7G038810 Rw7G038850 Rw7G038860 Rw7G038870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 795
Acc36I ACCTGC 2 cut(s) 929, 2356
AccB1I GGYRCC 2 cut(s) 176, 2039
AccI GTMKAC 2 cut(s) 341, 2103
AciI CCGC 4 cut(s) 754, 876, 1307, 2335
AclWI GGATC 5 cut(s) 941, 1166, 1782, 1795, 2249
AcsI RAATTY 4 cut(s) 394, 548, 1105, 1382
AcyI GRCGYC 1 cut(s) 757
AfiI CCNNNNNNNGG 2 cut(s) 865, 957
AflII CTTAAG 2 cut(s) 784, 2240
AjnI CCWGG 2 cut(s) 1026, 1258
AjuI GAANNNNNNNTTGG 4 cut(s) 479, 511, 1775, 1807
AleI CACNNNNGTG 1 cut(s) 334
Alw21I GWGCWC 1 cut(s) 2193
Alw26I GTCTC 3 cut(s) 113, 243, 1633
AlwI GGATC 5 cut(s) 941, 1166, 1782, 1795, 2249
AoxI GGCC 2 cut(s) 586, 611
ApeKI GCWGC 2 cut(s) 38, 969
ApoI RAATTY 4 cut(s) 394, 548, 1105, 1382
ArsI GACNNNNNNTTYG 2 cut(s) 1856, 1888
Asp700I GAANNNNTTC 1 cut(s) 151
AspLEI GCGC 1 cut(s) 1150
AspS9I GGNCC 4 cut(s) 587, 612, 746, 960
AsuC2I CCSGG 3 cut(s) 532, 616, 860
AsuHPI GGTGA 8 cut(s) 129, 199, 472, 890, 966, 1516, 1628, 2083
AsuII TTCGAA 1 cut(s) 1295
AvaII GGWCC 2 cut(s) 746, 960
AxyI CCTNAGG 1 cut(s) 1959
BaeI ACNNNNGTAYC 2 cut(s) 318, 351
BamHI GGATCC 1 cut(s) 1787
BanI GGYRCC 2 cut(s) 176, 2039
BarI GAAGNNNNNNTAC 6 cut(s) 502, 534, 910, 942, 1638, 1670
BauI CACGAG 3 cut(s) 332, 1077, 1458
BbsI GAAGAC 4 cut(s) 369, 791, 1175, 2337
Bbv12I GWGCWC 1 cut(s) 2193
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 2 cut(s) 50, 956
BccI CCATC 8 cut(s) 137, 232, 770, 836, 1148, 1607, 1956, 2062
BcgI CGANNNNNNTGC 2 cut(s) 1275, 1309
BciT130I CCWGG 2 cut(s) 1028, 1260
BcnI CCSGG 3 cut(s) 532, 616, 860
BcoDI GTCTC 3 cut(s) 113, 243, 1633
BfaI CTAG 8 cut(s) 156, 305, 600, 666, 705, 1280, 1643, 2259
BfmI CTRYAG 1 cut(s) 2104
BfrI CTTAAG 2 cut(s) 784, 2240
BfuAI ACCTGC 2 cut(s) 929, 2356
BisI GCNGC 4 cut(s) 39, 755, 970, 1308
BlsI GCNGC 4 cut(s) 40, 756, 971, 1309
BmcAI AGTACT 1 cut(s) 1327
Bme1390I CCNGG 5 cut(s) 532, 616, 860, 1028, 1260
Bme18I GGWCC 2 cut(s) 746, 960
BmgT120I GGNCC 4 cut(s) 587, 612, 746, 960
BmiI GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
BmrFI CCNGG 5 cut(s) 532, 616, 860, 1028, 1260
BoxI GACNNNNGTC 1 cut(s) 125
BpiI GAAGAC 4 cut(s) 369, 791, 1175, 2337
BpmI CTGGAG 3 cut(s) 1049, 1799, 2043
Bpu10I CCTNAGC 1 cut(s) 404
Bpu14I TTCGAA 1 cut(s) 1295
BpuEI CTTGAG 2 cut(s) 987, 2399
BpuMI CCSGG 3 cut(s) 532, 616, 860
BsaBI GATNNNNATC 1 cut(s) 1947
BsaHI GRCGYC 1 cut(s) 757
BsaI GGTCTC 1 cut(s) 113
BsaJI CCNNGG 6 cut(s) 289, 495, 514, 614, 1258, 1791
Bsc4I CCNNNNNNNGG 2 cut(s) 865, 957
Bse1I ACTGG 3 cut(s) 962, 1360, 2205
Bse21I CCTNAGG 1 cut(s) 1959
Bse3DI GCAATG 1 cut(s) 1357
Bse8I GATNNNNATC 1 cut(s) 1947
BseBI CCWGG 2 cut(s) 1028, 1260
BseDI CCNNGG 6 cut(s) 289, 495, 514, 614, 1258, 1791
BseGI GGATG 6 cut(s) 81, 243, 1159, 1224, 1618, 2073
BseJI GATNNNNATC 1 cut(s) 1947
BseLI CCNNNNNNNGG 2 cut(s) 865, 957
BseMI GCAATG 1 cut(s) 1357
BseMII CTCAG 6 cut(s) 65, 395, 966, 1734, 2126, 2178
BseNI ACTGG 3 cut(s) 962, 1360, 2205
BseRI GAGGAG 3 cut(s) 128, 131, 1901
BseXI GCAGC 2 cut(s) 50, 956
BsgI GTGCAG 1 cut(s) 1284
BshFI GGCC 2 cut(s) 588, 613
BshNI GGYRCC 2 cut(s) 176, 2039
BsiHKAI GWGCWC 1 cut(s) 2193
BsiSI CCGG 3 cut(s) 531, 616, 859
BslI CCNNNNNNNGG 2 cut(s) 865, 957
BsmAI GTCTC 3 cut(s) 113, 243, 1633
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 2 cut(s) 588, 613
Bso31I GGTCTC 1 cut(s) 113
Bsp119I TTCGAA 1 cut(s) 1295
Bsp1286I GDGCHC 1 cut(s) 2193
Bsp1407I TGTACA 2 cut(s) 792, 1654
Bsp143I GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 4 cut(s) 754, 876, 1307, 2335
BspANI GGCC 2 cut(s) 588, 613
BspCNI CTCAG 6 cut(s) 64, 396, 965, 1735, 2127, 2179
BspHI TCATGA 1 cut(s) 802
BspLI GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
BspMI ACCTGC 2 cut(s) 929, 2356
BspPI GGATC 5 cut(s) 941, 1166, 1782, 1795, 2249
BspQI GCTCTTC 1 cut(s) 2319
BspT104I TTCGAA 1 cut(s) 1295
BspT107I GGYRCC 2 cut(s) 176, 2039
BspTI CTTAAG 2 cut(s) 784, 2240
BspTNI GGTCTC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 1357
BsrGI TGTACA 2 cut(s) 792, 1654
BsrI ACTGG 3 cut(s) 962, 1360, 2205
BssECI CCNNGG 6 cut(s) 289, 495, 514, 614, 1258, 1791
BssMI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
BssNI GRCGYC 1 cut(s) 757
BssSI CACGAG 3 cut(s) 332, 1077, 1458
BssT1I CCWWGG 4 cut(s) 289, 495, 514, 1791
Bst2BI CACGAG 3 cut(s) 332, 1077, 1458
Bst2UI CCWGG 2 cut(s) 1028, 1260
Bst4CI ACNGT 8 cut(s) 66, 766, 792, 797, 828, 1301, 1913, 1938
Bst6I CTCTTC 3 cut(s) 1631, 2319, 2389
BstACI GRCGYC 1 cut(s) 757
BstAFI CTTAAG 2 cut(s) 784, 2240
BstAPI GCANNNNNTGC 2 cut(s) 47, 2348
BstAUI TGTACA 2 cut(s) 792, 1654
BstBI TTCGAA 1 cut(s) 1295
BstC8I GCNNGC 5 cut(s) 856, 1016, 1099, 1455, 2014
BstDEI CTNAG 7 cut(s) 51, 404, 952, 1743, 1959, 2135, 2187
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 6 cut(s) 81, 243, 1159, 1224, 1618, 2073
BstHHI GCGC 1 cut(s) 1150
BstKTI GATC 7 cut(s) 949, 1161, 1333, 1790, 2226, 2257, 2421
BstMAI GTCTC 3 cut(s) 113, 243, 1633
BstMBI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
BstMWI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 2348
BstNI CCWGG 2 cut(s) 1028, 1260
BstNSI RCATGY 3 cut(s) 858, 1101, 1981
BstPAI GACNNNNGTC 1 cut(s) 125
BstSCI CCNGG 5 cut(s) 530, 614, 858, 1026, 1258
BstSFI CTRYAG 1 cut(s) 2104
BstV1I GCAGC 2 cut(s) 50, 956
BstV2I GAAGAC 4 cut(s) 369, 791, 1175, 2337
BstX2I RGATCY 1 cut(s) 1787
BstXI CCANNNNNNTGG 2 cut(s) 130, 296
BstYI RGATCY 1 cut(s) 1787
Bsu36I CCTNAGG 1 cut(s) 1959
BsuRI GGCC 2 cut(s) 588, 613
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 6 cut(s) 81, 243, 1159, 1224, 1618, 2073
BtsI GCAGTG 2 cut(s) 1857, 2344
BtsIMutI CAGTG 4 cut(s) 1857, 1909, 2184, 2344
BveI ACCTGC 2 cut(s) 929, 2356
Cac8I GCNNGC 5 cut(s) 856, 1016, 1099, 1455, 2014
CciI TCATGA 1 cut(s) 802
CfoI GCGC 1 cut(s) 1150
Cfr13I GGNCC 4 cut(s) 587, 612, 746, 960
CseI GACGC 1 cut(s) 746
DdeI CTNAG 7 cut(s) 51, 404, 952, 1743, 1959, 2135, 2187
DpnI GATC 7 cut(s) 948, 1160, 1332, 1789, 2225, 2256, 2420
DpnII GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
DrdI GACNNNNNNGTC 1 cut(s) 795
DseDI GACNNNNNNGTC 1 cut(s) 795
Eam1104I CTCTTC 3 cut(s) 1631, 2319, 2389
EarI CTCTTC 3 cut(s) 1631, 2319, 2389
Eco130I CCWWGG 4 cut(s) 289, 495, 514, 1791
Eco31I GGTCTC 1 cut(s) 113
Eco32I GATATC 1 cut(s) 1199
Eco47I GGWCC 2 cut(s) 746, 960
Eco81I CCTNAGG 1 cut(s) 1959
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 2 cut(s) 1026, 1258
EcoRV GATATC 1 cut(s) 1199
EcoT14I CCWWGG 4 cut(s) 289, 495, 514, 1791
EcoT22I ATGCAT 3 cut(s) 730, 856, 1122
ErhI CCWWGG 4 cut(s) 289, 495, 514, 1791
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FauNDI CATATG 1 cut(s) 2423
FblI GTMKAC 2 cut(s) 341, 2103
Fnu4HI GCNGC 4 cut(s) 39, 755, 970, 1308
FokI GGATG 6 cut(s) 88, 250, 1166, 1211, 1625, 2080
Fsp4HI GCNGC 4 cut(s) 39, 755, 970, 1308
FspBI CTAG 8 cut(s) 156, 305, 600, 666, 705, 1280, 1643, 2259
GlaI GCGC 1 cut(s) 1149
GluI GCNGC 4 cut(s) 39, 755, 970, 1308
GsuI CTGGAG 3 cut(s) 1049, 1799, 2043
HaeIII GGCC 2 cut(s) 588, 613
HapII CCGG 3 cut(s) 531, 616, 859
HgaI GACGC 1 cut(s) 746
HhaI GCGC 1 cut(s) 1150
Hin1I GRCGYC 1 cut(s) 757
Hin6I GCGC 1 cut(s) 1148
HinP1I GCGC 1 cut(s) 1148
HincII GTYRAC 2 cut(s) 342, 1999
HindII GTYRAC 2 cut(s) 342, 1999
HindIII AAGCTT 1 cut(s) 1724
HpaII CCGG 3 cut(s) 531, 616, 859
HphI GGTGA 8 cut(s) 129, 199, 472, 890, 966, 1516, 1628, 2083
Hpy166II GTNNAC 7 cut(s) 207, 329, 342, 1999, 2074, 2104, 2184
Hpy188I TCNGA 9 cut(s) 54, 733, 955, 1142, 1163, 1254, 1448, 1813, 2228
Hpy8I GTNNAC 7 cut(s) 207, 329, 342, 1999, 2074, 2104, 2184
Hpy99I CGWCG 1 cut(s) 557
HpyAV CCTTC 5 cut(s) 936, 991, 1640, 2228, 2299
HpyCH4III ACNGT 8 cut(s) 66, 766, 792, 797, 828, 1301, 1913, 1938
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 2348
HpyF3I CTNAG 7 cut(s) 51, 404, 952, 1743, 1959, 2135, 2187
HpySE526I ACGT 1 cut(s) 126
Hsp92I GRCGYC 1 cut(s) 757
HspAI GCGC 1 cut(s) 1148
Kzo9I GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
LguI GCTCTTC 1 cut(s) 2319
LmnI GCTCC 4 cut(s) 1030, 1831, 2062, 2128
Lsp1109I GCAGC 2 cut(s) 50, 956
MaeI CTAG 8 cut(s) 156, 305, 600, 666, 705, 1280, 1643, 2259
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 5 cut(s) 66, 707, 1460, 1616, 2212
MalI GATC 7 cut(s) 948, 1160, 1332, 1789, 2225, 2256, 2420
MboI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
MfeI CAATTG 1 cut(s) 228
MflI RGATCY 1 cut(s) 1787
MhlI GDGCHC 1 cut(s) 2193
MlyI GAGTC 6 cut(s) 64, 985, 1189, 1602, 2238, 2256
MmeI TCCRAC 1 cut(s) 2106
Mph1103I ATGCAT 3 cut(s) 730, 856, 1122
MroXI GAANNNNTTC 1 cut(s) 151
MseI TTAA 7 cut(s) 86, 785, 1191, 1215, 1722, 2079, 2241
MslI CAYNNNNRTG 3 cut(s) 294, 334, 1914
MspA1I CMGCKG 1 cut(s) 1307
MspCI CTTAAG 2 cut(s) 784, 2240
MspI CCGG 3 cut(s) 531, 616, 859
MspR9I CCNGG 5 cut(s) 532, 616, 860, 1028, 1260
MunI CAATTG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 2 cut(s) 1028, 1260
MwoI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 2348
NciI CCSGG 3 cut(s) 532, 616, 860
NcoI CCATGG 1 cut(s) 289
NdeI CATATG 1 cut(s) 2423
NdeII GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
NlaIV GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
NmuCI GTSAC 4 cut(s) 707, 1460, 1616, 2212
NsiI ATGCAT 3 cut(s) 730, 856, 1122
NspI RCATGY 3 cut(s) 858, 1101, 1981
NspV TTCGAA 1 cut(s) 1295
OliI CACNNNNGTG 1 cut(s) 334
PaeI GCATGC 2 cut(s) 858, 1101
PagI TCATGA 1 cut(s) 802
PciSI GCTCTTC 1 cut(s) 2319
PctI GAATGC 1 cut(s) 1120
PdmI GAANNNNTTC 1 cut(s) 151
PfeI GAWTC 9 cut(s) 409, 443, 806, 1083, 1137, 1237, 1292, 1512, 1606
PfoI TCCNGGA 1 cut(s) 1026
PkrI GCNGC 4 cut(s) 40, 756, 971, 1309
PleI GAGTC 6 cut(s) 63, 985, 1188, 1601, 2237, 2256
PpsI GAGTC 6 cut(s) 63, 985, 1188, 1601, 2237, 2256
PshAI GACNNNNGTC 1 cut(s) 125
Psp6I CCWGG 2 cut(s) 1026, 1258
PspGI CCWGG 2 cut(s) 1026, 1258
PspN4I GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
PspPI GGNCC 4 cut(s) 587, 612, 746, 960
PsuI RGATCY 1 cut(s) 1787
RseI CAYNNNNRTG 3 cut(s) 294, 334, 1914
SalI GTCGAC 1 cut(s) 340
SapI GCTCTTC 1 cut(s) 2319
SaqAI TTAA 7 cut(s) 86, 785, 1191, 1215, 1722, 2079, 2241
SatI GCNGC 4 cut(s) 39, 755, 970, 1308
Sau3AI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2418
Sau96I GGNCC 4 cut(s) 587, 612, 746, 960
ScaI AGTACT 1 cut(s) 1327
SchI GAGTC 6 cut(s) 64, 985, 1189, 1602, 2238, 2256
ScrFI CCNGG 5 cut(s) 532, 616, 860, 1028, 1260
SduI GDGCHC 1 cut(s) 2193
SfcI CTRYAG 1 cut(s) 2104
SfuI TTCGAA 1 cut(s) 1295
SinI GGWCC 2 cut(s) 746, 960
SmiMI CAYNNNNRTG 3 cut(s) 294, 334, 1914
SmlI CTYRAG 4 cut(s) 784, 1002, 2240, 2378
SmoI CTYRAG 4 cut(s) 784, 1002, 2240, 2378
SphI GCATGC 2 cut(s) 858, 1101
SsiI CCGC 4 cut(s) 754, 876, 1307, 2335
SspI AATATT 1 cut(s) 1846
SspMI CTAG 8 cut(s) 156, 305, 600, 666, 705, 1280, 1643, 2259
StyD4I CCNGG 5 cut(s) 530, 614, 858, 1026, 1258
StyI CCWWGG 4 cut(s) 289, 495, 514, 1791
TaaI ACNGT 8 cut(s) 66, 766, 792, 797, 828, 1301, 1913, 1938
TaiI ACGT 1 cut(s) 129
TatI WGTACW 5 cut(s) 792, 1325, 1362, 1654, 2181
TauI GCSGC 2 cut(s) 757, 1310
TfiI GAWTC 9 cut(s) 409, 443, 806, 1083, 1137, 1237, 1292, 1512, 1606
Tru1I TTAA 7 cut(s) 86, 785, 1191, 1215, 1722, 2079, 2241
Tru9I TTAA 7 cut(s) 86, 785, 1191, 1215, 1722, 2079, 2241
TscAI CASTG 4 cut(s) 1864, 1916, 2191, 2344
TseFI GTSAC 4 cut(s) 707, 1460, 1616, 2212
TseI GCWGC 2 cut(s) 38, 969
Tsp45I GTSAC 4 cut(s) 707, 1460, 1616, 2212
TspDTI ATGAA 9 cut(s) 375, 791, 819, 1098, 1382, 1487, 1764, 2318, 2421
TspRI CASTG 4 cut(s) 1864, 1916, 2191, 2344
Vha464I CTTAAG 2 cut(s) 784, 2240
VpaK11BI GGWCC 2 cut(s) 746, 960
XapI RAATTY 4 cut(s) 394, 548, 1105, 1382
XceI RCATGY 3 cut(s) 858, 1101, 1981
XcmI CCANNNNNNNNNTGG 2 cut(s) 1504, 2050
XmiI GTMKAC 2 cut(s) 341, 2103
XmnI GAANNNNTTC 1 cut(s) 151
XspI CTAG 8 cut(s) 156, 305, 600, 666, 705, 1280, 1643, 2259
ZrmI AGTACT 1 cut(s) 1327
Zsp2I ATGCAT 3 cut(s) 730, 856, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.