Rroxscaffold_3G00222860

oxidation-reduction process

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000222
Physical Location & Seq
Reverse (-)
5889083 .. 5889901
819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00222860.1

Sequence Viewer

Length: 819 bp
ATGACTGAGAAGCGCATACCACTGCAGAAGCTCCACGGCAAGGTGGCCATCATCACCGGCGCCGCCAGCGGCATCGGTGCAGTCACGGCCCGACACTTCGCCGACCACGGAGCTCGCGTCGTCGTGATCGCCGACGTCCAAGACGCCAAGGGCCGAGAAGTCGCCGCATCCATCGGCTCCCACCGCTGCACCTACGTCCACTGCGACGTCACCGACGAGGACCAGGTCAAGTCGCTAGTCGACTCCACCGTCGAACTCTACGGCCAACTCGACGTGATGTACAGCAACGCGGGGATAACAGCCGCGTCGGTACAGACGGTGATGGAGCTGGACTTGTCATGGTTCGATAAGGTGATGGCGGTAAACGCCCGCGGGATGGCTGCGTGTGTGAAGCACGCGGCGCGTGCGATGGTGGGGAAGAGGGGCAGCATAGTGTGCACGGCGAGCTGCGTGGCGGAGTGGGGGACGGAGAGCGCGACGGACTACACGATCTCGAAGCACGCGGTGCTGGGGCTGGTGCGGTCGGCGAGCGTGCAGCTGGCGGCGCGTGGGGTGCGCGTGAACTGCGTGTCTCCGGGTGCGGTGGGGACGCCGCTGGTGAGCGAGCTTTTTAAGATTGGGGAGGAAGAGCTGAAGGATTTTATGGCAGTGGTATATTCGGGAAGCAGCGATGATGGGCCGCTGATGGAGAAACACGTGGCGGATGCGGTGCTGTTTTTGGCGTCGGAGGAGTCGGCGTTCATCACCGGCCATAATTTGGTGGTTGATGGGGGACTTGGCACCAAGGGTAAGTCATTGTTCAAACCATCATCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
adh_short_C2

Protein Analysis

272

Amino Acids

28.55

Weight (kDa)

6.13

Isoelectric Point (pI)

21.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 14 - 203 5.2e-47 short chain dehydrogenase
KR PF08659 17 - 175 1.1e-10 KR domain
adh_short_C2 PF13561 20 - 259 3.3e-60 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000222)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01600 FvH4_3g23770 FvH4_3g23780 FvH4_5g15540 FvH4_5g15550 FvH4_5g15560 FvH4_5g36480 FvH4_5g36490 FvH4_5g36512 FvH4_5g36520 FvH4_5g36540
malus_domestica MD06G1187400.v1.1 MD14G1193800.v1.1 MD15G1376500.v1.1
prunus_persica Prupe.5G029400_v2.0.a1 Prupe.5G185600_v2.0.a1 Prupe.5G185700_v2.0.a1
pyrus_communis pycom06g16640 pycom06g16650 pycom06g16660 pycom06g16670 pycom14g16120 pycom15g33650
rosa_chinensis RchiOBHm_Chr7g0180541 RchiOBHm_Chr7g0180551 RchiOBHm_Chr7g0234561 RchiOBHm_Chr7g0238411 RchiOBHm_Chr7g0238441 RchiOBHm_Chr7g0238501 RchiOBHm_Chr7g0238561 RchiOBHm_Chr7g0238571 RchiOBHm_Chr7g0238601 RchiOBHm_Chr7g0242071 RchiOBHm_Chr7g0242111 RchiOBHm_Chr7g0242121 RchiOBHm_Chr7g0242181 RchiOBHm_Chr7g0242191 RchiOBHm_Chr7g0242201 RchiOBHm_Chr7g0242221 RchiOBHm_Chr7g0242291 RchiOBHm_Chr7g0242301
rosa_laevigata RLG00000000902 RLG00000000905 RLG00000000907 RLG00000000908 RLG00000000912 RLG00000005257 RLG00000005259 RLG00000035265
rosa_multiflora Rmu_co8004978.1_g000001 Rmu_co8126788.1_g000001 Rmu_co8332817.1_g000001 Rmu_sc0000429.1_g000001 Rmu_sc0000429.1_g000005 Rmu_sc0000429.1_g000010 Rmu_sc0000429.1_g000017 Rmu_sc0000429.1_g000022 Rmu_sc0000429.1_g000023 Rmu_sc0000429.1_g000030 Rmu_sc0001371.1_g000029 Rmu_sc0001428.1_g000008 Rmu_sc0001428.1_g000012 Rmu_sc0001428.1_g000023 Rmu_sc0001428.1_g000024 Rmu_sc0001536.1_g000009 Rmu_sc0001536.1_g000015 Rmu_sc0003321.1_g000025 Rmu_sc0003322.1_g000017 Rmu_sc0005690.1_g000011 Rmu_sc0005690.1_g000015 Rmu_sc0007123.1_g000006 Rmu_sc0023798.1_g000003 Rmu_sc0025040.1_g000003
rosa_roxburghii Rroxscaffold_3G00222860 Rroxscaffold_3G00222910 Rroxscaffold_3G00222930 Rroxscaffold_3G00222970 Rroxscaffold_3G00272800 Rroxscaffold_3G00272810
rosa_rugosa Rorug06G0433300 Rorug06G0433400 Rorug06G0433400 Rorug07G0312500 Rorug07G0312900 Rorug07G0313300 Rorug07G0313400 Rorug07G0313700 Rorug07G0314100 Rorug07G0314200 Rorug07G0314700
rosa_samantha Rh5DG534900 Rh6BG486700 Rh6CG490700 Rh7AG034600 Rh7AG035000 Rh7AG467300 Rh7AG467400 Rh7AG467700 Rh7AG467800 Rh7AG468100 Rh7AG468800 Rh7AG468900 Rh7AG469100 Rh7AG469200 Rh7AG469400 Rh7AG469500 Rh7AG469600 Rh7AG470000 Rh7AG470100 Rh7BG034600 Rh7BG034700 Rh7BG034900 Rh7BG438400 Rh7BG438800 Rh7BG439000 Rh7BG439100 Rh7BG439300 Rh7BG439400 Rh7BG439800 Rh7CG036300 Rh7CG036500 Rh7CG199800 Rh7CG485400 Rh7CG485800 Rh7CG486000 Rh7CG486100 Rh7CG486200 Rh7CG486600 Rh7CG486700 Rh7DG034900 Rh7DG035200 Rh7DG453900 Rh7DG454300 Rh7DG454400 Rh7DG454500 Rh7DG454600 Rh7DG455000 Rh7DG455100
rosa_wichuraiana Rw0G009440 Rw0G009460 Rw7G002870 Rw7G038750 Rw7G038810 Rw7G038850 Rw7G038860 Rw7G038870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 248
AatII GACGTC 2 cut(s) 138, 210
AccB1I GGYRCC 2 cut(s) 59, 779
AccB7I CCANNNNNTGG 1 cut(s) 757
AccI GTMKAC 1 cut(s) 240
AcoI YGGCCR 3 cut(s) 45, 262, 748
AcuI CTGAAG 1 cut(s) 653
AcvI CACGTG 1 cut(s) 697
AcyI GRCGYC 6 cut(s) 60, 135, 144, 207, 590, 722
AdeI CACNNNGTG 1 cut(s) 505
AfaI GTAC 2 cut(s) 281, 312
AfiI CCNNNNNNNGG 3 cut(s) 40, 376, 757
AflIII ACRYGT 1 cut(s) 694
AgsI TTSAA 1 cut(s) 802
AjiI CACGTC 1 cut(s) 274
AjnI CCWGG 1 cut(s) 222
AloI GAACNNNNNNTCC 2 cut(s) 722, 754
AluBI AGCT 7 cut(s) 31, 113, 328, 447, 538, 607, 631
AluI AGCT 7 cut(s) 31, 113, 328, 447, 538, 607, 631
Alw21I GWGCWC 2 cut(s) 115, 440
Alw26I GTCTC 1 cut(s) 576
Alw44I GTGCAC 1 cut(s) 436
AoxI GGCC 6 cut(s) 45, 87, 151, 262, 677, 748
ApaLI GTGCAC 1 cut(s) 436
ApeKI GCWGC 6 cut(s) 186, 380, 426, 447, 535, 666
AspLEI GCGC 6 cut(s) 15, 62, 403, 476, 547, 558
AspS9I GGNCC 4 cut(s) 88, 151, 220, 677
AsuC2I CCSGG 1 cut(s) 576
AsuHPI GGTGA 6 cut(s) 46, 202, 331, 364, 610, 736
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 1 cut(s) 440
BalI TGGCCA 1 cut(s) 47
BanI GGYRCC 2 cut(s) 59, 779
BanII GRGCYC 1 cut(s) 115
BbrPI CACGTG 1 cut(s) 697
Bbv12I GWGCWC 2 cut(s) 115, 440
BbvI GCAGC 6 cut(s) 173, 367, 434, 438, 547, 678
BceAI ACGGC 4 cut(s) 52, 102, 277, 456
BciT130I CCWGG 1 cut(s) 224
BcnI CCSGG 1 cut(s) 576
BcoDI GTCTC 1 cut(s) 576
BfaI CTAG 1 cut(s) 236
BfmI CTRYAG 1 cut(s) 23
BfoI RGCGCY 1 cut(s) 63
Bme1390I CCNGG 2 cut(s) 224, 576
Bme18I GGWCC 1 cut(s) 220
BmgBI CACGTC 1 cut(s) 274
BmgT120I GGNCC 4 cut(s) 88, 151, 220, 677
BmiI GGNNCC 3 cut(s) 61, 178, 781
BmrFI CCNGG 2 cut(s) 224, 576
BmsI GCATC 3 cut(s) 81, 176, 694
BpuMI CCSGG 1 cut(s) 576
BsaAI YACGTR 1 cut(s) 697
BsaHI GRCGYC 6 cut(s) 60, 135, 144, 207, 590, 722
BsaJI CCNNGG 5 cut(s) 34, 106, 147, 370, 783
BsaXI ACNNNNNCTCC 4 cut(s) 102, 132, 722, 752
Bsc4I CCNNNNNNNGG 3 cut(s) 40, 376, 757
Bse118I RCCGGY 2 cut(s) 56, 746
BseBI CCWGG 1 cut(s) 224
BseDI CCNNGG 5 cut(s) 34, 106, 147, 370, 783
BseGI GGATG 3 cut(s) 167, 381, 709
BseLI CCNNNNNNNGG 3 cut(s) 40, 376, 757
BseRI GAGGAG 1 cut(s) 743
BseSI GKGCMC 1 cut(s) 440
BseXI GCAGC 6 cut(s) 173, 367, 434, 438, 547, 678
BseYI CCCAGC 1 cut(s) 508
BsgI GTGCAG 3 cut(s) 99, 172, 554
Bsh1285I CGRYCG 1 cut(s) 524
BshFI GGCC 6 cut(s) 47, 89, 153, 264, 679, 750
BshNI GGYRCC 2 cut(s) 59, 779
BsiEI CGRYCG 1 cut(s) 524
BsiHKAI GWGCWC 2 cut(s) 115, 440
BsiSI CCGG 3 cut(s) 57, 575, 747
BslFI GGGAC 3 cut(s) 478, 601, 786
BslI CCNNNNNNNGG 3 cut(s) 40, 376, 757
BsmAI GTCTC 1 cut(s) 576
BsmFI GGGAC 3 cut(s) 478, 601, 786
BsnI GGCC 6 cut(s) 47, 89, 153, 264, 679, 750
Bsp1286I GDGCHC 2 cut(s) 115, 440
Bsp1407I TGTACA 1 cut(s) 279
Bsp143I GATC 2 cut(s) 126, 489
BspANI GGCC 6 cut(s) 47, 89, 153, 264, 679, 750
BspLI GGNNCC 3 cut(s) 61, 178, 781
BspMAI CTGCAG 1 cut(s) 27
BspQI GCTCTTC 1 cut(s) 621
BspT107I GGYRCC 2 cut(s) 59, 779
BsrFI RCCGGY 2 cut(s) 56, 746
BsrGI TGTACA 1 cut(s) 279
BssAI RCCGGY 2 cut(s) 56, 746
BssECI CCNNGG 5 cut(s) 34, 106, 147, 370, 783
BssMI GATC 2 cut(s) 126, 489
BssNI GRCGYC 6 cut(s) 60, 135, 144, 207, 590, 722
BssT1I CCWWGG 2 cut(s) 147, 783
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 2 cut(s) 250, 319
Bst6I CTCTTC 2 cut(s) 413, 621
BstACI GRCGYC 6 cut(s) 60, 135, 144, 207, 590, 722
BstAPI GCANNNNNTGC 2 cut(s) 435, 505
BstAUI TGTACA 1 cut(s) 279
BstBAI YACGTR 1 cut(s) 697
BstDEI CTNAG 1 cut(s) 6
BstDSI CCRYGG 3 cut(s) 34, 106, 370
BstF5I GGATG 3 cut(s) 167, 381, 709
BstH2I RGCGCY 1 cut(s) 63
BstHHI GCGC 6 cut(s) 15, 62, 403, 476, 547, 558
BstKTI GATC 2 cut(s) 129, 492
BstMAI GTCTC 1 cut(s) 576
BstMBI GATC 2 cut(s) 126, 489
BstMCI CGRYCG 1 cut(s) 524
BstNI CCWGG 1 cut(s) 224
BstSCI CCNGG 2 cut(s) 222, 574
BstSFI CTRYAG 1 cut(s) 23
BstSLI GKGCMC 1 cut(s) 440
BstV1I GCAGC 6 cut(s) 173, 367, 434, 438, 547, 678
BsuRI GGCC 6 cut(s) 47, 89, 153, 264, 679, 750
BtgI CCRYGG 3 cut(s) 34, 106, 370
BtgZI GCGATG 2 cut(s) 422, 684
BtrI CACGTC 1 cut(s) 274
BtsCI GGATG 3 cut(s) 167, 381, 709
BtsI GCAGTG 3 cut(s) 20, 199, 654
BtsIMutI CAGTG 3 cut(s) 20, 199, 654
CfoI GCGC 6 cut(s) 15, 62, 403, 476, 547, 558
Cfr10I RCCGGY 2 cut(s) 56, 746
Cfr13I GGNCC 4 cut(s) 88, 151, 220, 677
Cfr42I CCGCGG 1 cut(s) 373
CseI GACGC 5 cut(s) 106, 152, 294, 598, 711
CsiI ACCWGGT 1 cut(s) 222
Csp6I GTAC 2 cut(s) 280, 311
CviAII CATG 1 cut(s) 339
CviQI GTAC 2 cut(s) 280, 311
DdeI CTNAG 1 cut(s) 6
DinI GGCGCC 1 cut(s) 61
DpnI GATC 2 cut(s) 128, 491
DpnII GATC 2 cut(s) 126, 489
DraIII CACNNNGTG 1 cut(s) 505
DrdI GACNNNNNNGTC 1 cut(s) 248
DseDI GACNNNNNNGTC 1 cut(s) 248
EaeI YGGCCR 3 cut(s) 45, 262, 748
Eam1104I CTCTTC 2 cut(s) 413, 621
EarI CTCTTC 2 cut(s) 413, 621
EciI GGCGGA 2 cut(s) 470, 716
Ecl136II GAGCTC 1 cut(s) 113
Eco130I CCWWGG 2 cut(s) 147, 783
Eco24I GRGCYC 1 cut(s) 115
Eco47I GGWCC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 113
Eco57I CTGAAG 1 cut(s) 653
Eco72I CACGTG 1 cut(s) 697
EcoICRI GAGCTC 1 cut(s) 113
EcoRII CCWGG 1 cut(s) 222
EcoT14I CCWWGG 2 cut(s) 147, 783
EcoT38I GRGCYC 1 cut(s) 115
EgeI GGCGCC 1 cut(s) 61
EheI GGCGCC 1 cut(s) 61
ErhI CCWWGG 2 cut(s) 147, 783
FaeI CATG 1 cut(s) 342
FaiI YATR 6 cut(s) 17, 340, 431, 644, 655, 753
FaqI GGGAC 3 cut(s) 478, 601, 786
FatI CATG 1 cut(s) 338
FauI CCCGC 3 cut(s) 283, 365, 377
FblI GTMKAC 1 cut(s) 240
FokI GGATG 3 cut(s) 154, 388, 716
FriOI GRGCYC 1 cut(s) 115
FspBI CTAG 1 cut(s) 236
GlaI GCGC 6 cut(s) 14, 61, 402, 475, 546, 557
GsaI CCCAGC 1 cut(s) 512
HaeII RGCGCY 1 cut(s) 63
HaeIII GGCC 6 cut(s) 47, 89, 153, 264, 679, 750
HapII CCGG 3 cut(s) 57, 575, 747
HgaI GACGC 5 cut(s) 106, 152, 294, 598, 711
HhaI GCGC 6 cut(s) 15, 62, 403, 476, 547, 558
Hin1I GRCGYC 6 cut(s) 60, 135, 144, 207, 590, 722
Hin1II CATG 1 cut(s) 342
Hin6I GCGC 6 cut(s) 13, 60, 401, 474, 545, 556
HinP1I GCGC 6 cut(s) 13, 60, 401, 474, 545, 556
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HinfI GANTC 2 cut(s) 242, 731
HpaII CCGG 3 cut(s) 57, 575, 747
HphI GGTGA 6 cut(s) 46, 202, 331, 364, 610, 736
Hpy166II GTNNAC 5 cut(s) 199, 241, 364, 438, 562
Hpy188I TCNGA 1 cut(s) 727
Hpy188III TCNNGA 3 cut(s) 124, 493, 660
Hpy8I GTNNAC 5 cut(s) 199, 241, 364, 438, 562
HpyAV CCTTC 1 cut(s) 628
HpyCH4III ACNGT 2 cut(s) 250, 319
HpyCH4IV ACGT 5 cut(s) 135, 195, 207, 273, 696
HpyCH4V TGCA 5 cut(s) 25, 80, 189, 438, 535
HpyF3I CTNAG 1 cut(s) 6
HpySE526I ACGT 5 cut(s) 135, 195, 207, 273, 696
Hsp92I GRCGYC 6 cut(s) 60, 135, 144, 207, 590, 722
Hsp92II CATG 1 cut(s) 342
HspAI GCGC 6 cut(s) 13, 60, 401, 474, 545, 556
KasI GGCGCC 1 cut(s) 59
KspI CCGCGG 1 cut(s) 373
Kzo9I GATC 2 cut(s) 126, 489
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 4 cut(s) 36, 110, 182, 325
Lsp1109I GCAGC 6 cut(s) 173, 367, 434, 438, 547, 678
LweI GCATC 3 cut(s) 81, 176, 694
MabI ACCWGGT 1 cut(s) 222
MaeI CTAG 1 cut(s) 236
MaeII ACGT 5 cut(s) 135, 195, 207, 273, 696
MaeIII GTNAC 2 cut(s) 82, 208
MalI GATC 2 cut(s) 128, 491
MboI GATC 2 cut(s) 126, 489
MboII GAAGA 2 cut(s) 430, 638
MhlI GDGCHC 2 cut(s) 115, 440
MlsI TGGCCA 1 cut(s) 47
MluCI AATT 1 cut(s) 754
MluNI TGGCCA 1 cut(s) 47
Mly113I GGCGCC 1 cut(s) 60
MlyI GAGTC 2 cut(s) 236, 740
MmeI TCCRAC 1 cut(s) 705
MnlI CCTC 4 cut(s) 211, 414, 616, 721
Mox20I TGGCCA 1 cut(s) 47
MscI TGGCCA 1 cut(s) 47
MseI TTAA 1 cut(s) 612
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 6 cut(s) 69, 186, 372, 538, 595, 682
MspI CCGG 3 cut(s) 57, 575, 747
MspR9I CCNGG 2 cut(s) 224, 576
MvaI CCWGG 1 cut(s) 224
NarI GGCGCC 1 cut(s) 60
NciI CCSGG 1 cut(s) 576
NdeII GATC 2 cut(s) 126, 489
NlaIII CATG 1 cut(s) 342
NlaIV GGNNCC 3 cut(s) 61, 178, 781
NmeAIII GCCGAG 1 cut(s) 179
NmuCI GTSAC 2 cut(s) 82, 208
PciSI GCTCTTC 1 cut(s) 621
PcsI WCGNNNNNNNCGW 8 cut(s) 114, 129, 201, 213, 246, 267, 473, 485
PflFI GACNNNGTC 1 cut(s) 224
PflMI CCANNNNNTGG 1 cut(s) 757
PleI GAGTC 2 cut(s) 236, 739
PluTI GGCGCC 1 cut(s) 63
PmaCI CACGTG 1 cut(s) 697
PmlI CACGTG 1 cut(s) 697
PpsI GAGTC 2 cut(s) 236, 739
Ppu21I YACGTR 1 cut(s) 697
Psp124BI GAGCTC 1 cut(s) 115
Psp6I CCWGG 1 cut(s) 222
PspCI CACGTG 1 cut(s) 697
PspFI CCCAGC 1 cut(s) 508
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 3 cut(s) 61, 178, 781
PspPI GGNCC 4 cut(s) 88, 151, 220, 677
PstI CTGCAG 1 cut(s) 27
PsyI GACNNNGTC 1 cut(s) 224
PvuII CAGCTG 1 cut(s) 538
RsaI GTAC 2 cut(s) 281, 312
RsaNI GTAC 2 cut(s) 280, 311
SacI GAGCTC 1 cut(s) 115
SacII CCGCGG 1 cut(s) 373
SalI GTCGAC 1 cut(s) 239
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 1 cut(s) 612
Sau3AI GATC 2 cut(s) 126, 489
Sau96I GGNCC 4 cut(s) 88, 151, 220, 677
SchI GAGTC 2 cut(s) 236, 740
ScrFI CCNGG 2 cut(s) 224, 576
SduI GDGCHC 2 cut(s) 115, 440
SexAI ACCWGGT 1 cut(s) 222
SfaNI GCATC 3 cut(s) 81, 176, 694
SfcI CTRYAG 1 cut(s) 23
SfoI GGCGCC 1 cut(s) 61
Sfr303I CCGCGG 1 cut(s) 373
SgrAI CRCCGGYG 1 cut(s) 56
SgrBI CCGCGG 1 cut(s) 373
SinI GGWCC 1 cut(s) 220
Sse9I AATT 1 cut(s) 754
SspDI GGCGCC 1 cut(s) 59
SspMI CTAG 1 cut(s) 236
SstI GAGCTC 1 cut(s) 115
StyD4I CCNGG 2 cut(s) 222, 574
StyI CCWWGG 2 cut(s) 147, 783
TaaI ACNGT 2 cut(s) 250, 319
TaiI ACGT 5 cut(s) 138, 198, 210, 276, 699
TaqI TCGA 5 cut(s) 240, 252, 270, 345, 494
TasI AATT 1 cut(s) 754
TatI WGTACW 1 cut(s) 279
TauI GCSGC 8 cut(s) 65, 72, 167, 305, 401, 545, 595, 682
Tru1I TTAA 1 cut(s) 612
Tru9I TTAA 1 cut(s) 612
TscAI CASTG 3 cut(s) 27, 206, 654
TseFI GTSAC 2 cut(s) 82, 208
TseI GCWGC 6 cut(s) 186, 380, 426, 447, 535, 666
Tsp45I GTSAC 2 cut(s) 82, 208
TspDTI ATGAA 1 cut(s) 730
TspGWI ACGGA 3 cut(s) 123, 482, 494
TspRI CASTG 3 cut(s) 27, 206, 654
Tth111I GACNNNGTC 1 cut(s) 224
Van91I CCANNNNNTGG 1 cut(s) 757
VneI GTGCAC 1 cut(s) 436
VpaK11BI GGWCC 1 cut(s) 220
XmiI GTMKAC 1 cut(s) 240
XspI CTAG 1 cut(s) 236
ZraI GACGTC 2 cut(s) 136, 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.