Rw0G009460

oxidation-reduction process

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00371
OG0000222
Physical Location & Seq
Forward (+)
52520 .. 65421
12902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G009460.1

Sequence Viewer

Length: 852 bp
ATGATTATTGCGCTCAATAGAAACATCATGCTTTTTAAAGGGTGTGTGTGTTTGAAGCTCCACAGCAAGGTGGCCATTGTCACAGGCGCCGCCAGCGGTATCGGTGCAGTCACCGCGCGCCACTTTGCCGACCACGGAGCTCGCGTCGTTGTGATCGCCGACGTCCAAGATGCCAAGGGCCAAGAAGTGGCCACATCCATCGGCTCCCACCGCTGCACCTACGTCCACTGCGACGTCACTGACGAGGACCAGGTCGAATCTCTAGTCGACTCCACCGTCGAAAAGTACGGCCAACTCGACGTGATGTACAGCAACGCGGGGATAACCGCCTCGTCGGTGCAGAAGGTGCTGGAGCTGGACTTGTCATGGTTCGATAAGGTGATGGAGGTGAACGCCCGGGGGATGGCGGCATGTGTGAAGCACGCGGCGCGTGCGATGGTGGGGAAGGGAGTCAGAGGCAGCATAGTGTGTACGGCAAGCATAGTGGCGGACATAGTGGCGGAGTGCGGGACGGTGAGCATGACGGACTACACGATGTCGAAGCACGCGGTGCTGGGGCTGGTGCGGTCGGCAAGCGTGCAGCTGGCGGCCCATGGGGTGCGCGTGAACTGCGTGTCGCCGGGTTTGGTGGGGACGCCGCTGTTGAGCGAGACTTTTAAGCTTAGGGAGGAAGAAGTGAAGGAGATGATGACAGCGGTTTATTCAGAAAGCAACGATGGGCCGTTGACGGAGAAACACGTGGCGGATGCGGTGGTCTTTTTGGTGTCGGAGGACTCGGCGTTCGTCACCGGCCATAATTTGGTGGTTGATGGGGGATTTGGCACCAAGTCCTTATCAGTACTCAAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
adh_short_C2

Protein Analysis

283

Amino Acids

29.91

Weight (kDa)

5.92

Isoelectric Point (pI)

21.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 23 - 219 4.8e-47 short chain dehydrogenase
KR PF08659 26 - 136 1.6e-09 KR domain
Epimerase PF01370 26 - 194 7.9e-06 NAD dependent epimerase/dehydratase family
adh_short_C2 PF13561 29 - 273 4.8e-60 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000222)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01600 FvH4_3g23770 FvH4_3g23780 FvH4_5g15540 FvH4_5g15550 FvH4_5g15560 FvH4_5g36480 FvH4_5g36490 FvH4_5g36512 FvH4_5g36520 FvH4_5g36540
malus_domestica MD06G1187400.v1.1 MD14G1193800.v1.1 MD15G1376500.v1.1
prunus_persica Prupe.5G029400_v2.0.a1 Prupe.5G185600_v2.0.a1 Prupe.5G185700_v2.0.a1
pyrus_communis pycom06g16640 pycom06g16650 pycom06g16660 pycom06g16670 pycom14g16120 pycom15g33650
rosa_chinensis RchiOBHm_Chr7g0180541 RchiOBHm_Chr7g0180551 RchiOBHm_Chr7g0234561 RchiOBHm_Chr7g0238411 RchiOBHm_Chr7g0238441 RchiOBHm_Chr7g0238501 RchiOBHm_Chr7g0238561 RchiOBHm_Chr7g0238571 RchiOBHm_Chr7g0238601 RchiOBHm_Chr7g0242071 RchiOBHm_Chr7g0242111 RchiOBHm_Chr7g0242121 RchiOBHm_Chr7g0242181 RchiOBHm_Chr7g0242191 RchiOBHm_Chr7g0242201 RchiOBHm_Chr7g0242221 RchiOBHm_Chr7g0242291 RchiOBHm_Chr7g0242301
rosa_laevigata RLG00000000902 RLG00000000905 RLG00000000907 RLG00000000908 RLG00000000912 RLG00000005257 RLG00000005259 RLG00000035265
rosa_multiflora Rmu_co8004978.1_g000001 Rmu_co8126788.1_g000001 Rmu_co8332817.1_g000001 Rmu_sc0000429.1_g000001 Rmu_sc0000429.1_g000005 Rmu_sc0000429.1_g000010 Rmu_sc0000429.1_g000017 Rmu_sc0000429.1_g000022 Rmu_sc0000429.1_g000023 Rmu_sc0000429.1_g000030 Rmu_sc0001371.1_g000029 Rmu_sc0001428.1_g000008 Rmu_sc0001428.1_g000012 Rmu_sc0001428.1_g000023 Rmu_sc0001428.1_g000024 Rmu_sc0001536.1_g000009 Rmu_sc0001536.1_g000015 Rmu_sc0003321.1_g000025 Rmu_sc0003322.1_g000017 Rmu_sc0005690.1_g000011 Rmu_sc0005690.1_g000015 Rmu_sc0007123.1_g000006 Rmu_sc0023798.1_g000003 Rmu_sc0025040.1_g000003
rosa_roxburghii Rroxscaffold_3G00222860 Rroxscaffold_3G00222910 Rroxscaffold_3G00222930 Rroxscaffold_3G00222970 Rroxscaffold_3G00272800 Rroxscaffold_3G00272810
rosa_rugosa Rorug06G0433300 Rorug06G0433400 Rorug06G0433400 Rorug07G0312500 Rorug07G0312900 Rorug07G0313300 Rorug07G0313400 Rorug07G0313700 Rorug07G0314100 Rorug07G0314200 Rorug07G0314700
rosa_samantha Rh5DG534900 Rh6BG486700 Rh6CG490700 Rh7AG034600 Rh7AG035000 Rh7AG467300 Rh7AG467400 Rh7AG467700 Rh7AG467800 Rh7AG468100 Rh7AG468800 Rh7AG468900 Rh7AG469100 Rh7AG469200 Rh7AG469400 Rh7AG469500 Rh7AG469600 Rh7AG470000 Rh7AG470100 Rh7BG034600 Rh7BG034700 Rh7BG034900 Rh7BG438400 Rh7BG438800 Rh7BG439000 Rh7BG439100 Rh7BG439300 Rh7BG439400 Rh7BG439800 Rh7CG036300 Rh7CG036500 Rh7CG199800 Rh7CG485400 Rh7CG485800 Rh7CG486000 Rh7CG486100 Rh7CG486200 Rh7CG486600 Rh7CG486700 Rh7DG034900 Rh7DG035200 Rh7DG453900 Rh7DG454300 Rh7DG454400 Rh7DG454500 Rh7DG454600 Rh7DG455000 Rh7DG455100
rosa_wichuraiana Rw0G009440 Rw0G009460 Rw7G002870 Rw7G038750 Rw7G038810 Rw7G038850 Rw7G038860 Rw7G038870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 275
AatII GACGTC 2 cut(s) 165, 237
AccB1I GGYRCC 2 cut(s) 86, 821
AccB7I CCANNNNNTGG 2 cut(s) 187, 799
AccI GTMKAC 1 cut(s) 267
AccII CGCG 8 cut(s) 116, 118, 144, 317, 425, 430, 548, 603
AcoI YGGCCR 4 cut(s) 72, 189, 289, 790
AcvI CACGTG 1 cut(s) 739
AcyI GRCGYC 4 cut(s) 87, 162, 234, 635
AdeI CACNNNGTG 1 cut(s) 550
AfaI GTAC 4 cut(s) 287, 308, 472, 840
AfiI CCNNNNNNNGG 4 cut(s) 67, 187, 403, 799
AflIII ACRYGT 1 cut(s) 736
AgsI TTSAA 1 cut(s) 55
AjiI CACGTC 1 cut(s) 301
AjnI CCWGG 1 cut(s) 249
AloI GAACNNNNNNTCC 2 cut(s) 764, 796
AluBI AGCT 5 cut(s) 58, 140, 355, 583, 661
AluI AGCT 5 cut(s) 58, 140, 355, 583, 661
Alw21I GWGCWC 1 cut(s) 142
Alw26I GTCTC 1 cut(s) 644
Ama87I CYCGRG 1 cut(s) 396
AoxI GGCC 7 cut(s) 72, 178, 189, 289, 588, 719, 790
ApeKI GCWGC 3 cut(s) 213, 459, 580
ArsI GACNNNNNNTTYG 4 cut(s) 249, 281, 764, 796
AspLEI GCGC 6 cut(s) 13, 89, 118, 120, 430, 603
AspS9I GGNCC 4 cut(s) 178, 247, 589, 719
AsuC2I CCSGG 3 cut(s) 397, 398, 621
AsuHPI GGTGA 5 cut(s) 103, 391, 400, 526, 778
AvaI CYCGRG 1 cut(s) 396
AvaII GGWCC 1 cut(s) 247
BalI TGGCCA 2 cut(s) 74, 191
BanI GGYRCC 2 cut(s) 86, 821
BanII GRGCYC 1 cut(s) 142
BbrPI CACGTG 1 cut(s) 739
Bbv12I GWGCWC 1 cut(s) 142
BbvI GCAGC 3 cut(s) 200, 471, 592
BccI CCATC 6 cut(s) 206, 376, 397, 430, 710, 803
BceAI ACGGC 3 cut(s) 304, 489, 706
BciT130I CCWGG 1 cut(s) 251
BcnI CCSGG 3 cut(s) 397, 398, 621
BcoDI GTCTC 1 cut(s) 644
BfaI CTAG 1 cut(s) 263
BfoI RGCGCY 1 cut(s) 90
BisI GCNGC 8 cut(s) 90, 214, 408, 426, 460, 581, 588, 638
BlsI GCNGC 8 cut(s) 91, 215, 409, 427, 461, 582, 589, 639
BmcAI AGTACT 1 cut(s) 840
Bme1390I CCNGG 4 cut(s) 251, 397, 398, 621
Bme18I GGWCC 1 cut(s) 247
BmeT110I CYCGRG 1 cut(s) 396
BmgBI CACGTC 1 cut(s) 301
BmgT120I GGNCC 4 cut(s) 178, 247, 589, 719
BmiI GGNNCC 3 cut(s) 88, 205, 823
BmrFI CCNGG 4 cut(s) 251, 397, 398, 621
BmsI GCATC 2 cut(s) 160, 736
BpmI CTGGAG 1 cut(s) 371
Bpu10I CCTNAGC 1 cut(s) 662
BpuMI CCSGG 3 cut(s) 397, 398, 621
BsaAI YACGTR 1 cut(s) 739
BsaHI GRCGYC 4 cut(s) 87, 162, 234, 635
BsaJI CCNNGG 5 cut(s) 133, 174, 396, 397, 592
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
Bsc4I CCNNNNNNNGG 4 cut(s) 67, 187, 403, 799
Bse118I RCCGGY 1 cut(s) 788
BseBI CCWGG 1 cut(s) 251
BseDI CCNNGG 5 cut(s) 133, 174, 396, 397, 592
BseGI GGATG 3 cut(s) 194, 408, 751
BseLI CCNNNNNNNGG 4 cut(s) 67, 187, 403, 799
BsePI GCGCGC 1 cut(s) 116
BseXI GCAGC 3 cut(s) 200, 471, 592
BseYI CCCAGC 1 cut(s) 553
BsgI GTGCAG 4 cut(s) 126, 199, 359, 599
Bsh1236I CGCG 8 cut(s) 116, 118, 144, 317, 425, 430, 548, 603
Bsh1285I CGRYCG 1 cut(s) 569
BshFI GGCC 7 cut(s) 74, 180, 191, 291, 590, 721, 792
BshNI GGYRCC 2 cut(s) 86, 821
BsiEI CGRYCG 1 cut(s) 569
BsiHKAI GWGCWC 1 cut(s) 142
BsiHKCI CYCGRG 1 cut(s) 396
BsiSI CCGG 3 cut(s) 397, 620, 789
BslFI GGGAC 2 cut(s) 523, 646
BslI CCNNNNNNNGG 4 cut(s) 67, 187, 403, 799
BsmAI GTCTC 1 cut(s) 644
BsmFI GGGAC 2 cut(s) 523, 646
BsnI GGCC 7 cut(s) 74, 180, 191, 291, 590, 721, 792
BsoBI CYCGRG 1 cut(s) 396
Bsp1286I GDGCHC 1 cut(s) 142
Bsp1407I TGTACA 1 cut(s) 306
Bsp143I GATC 1 cut(s) 153
Bsp19I CCATGG 1 cut(s) 592
BspANI GGCC 7 cut(s) 74, 180, 191, 291, 590, 721, 792
BspFNI CGCG 8 cut(s) 116, 118, 144, 317, 425, 430, 548, 603
BspLI GGNNCC 3 cut(s) 88, 205, 823
BspT107I GGYRCC 2 cut(s) 86, 821
BsrFI RCCGGY 1 cut(s) 788
BsrGI TGTACA 1 cut(s) 306
BssAI RCCGGY 1 cut(s) 788
BssECI CCNNGG 5 cut(s) 133, 174, 396, 397, 592
BssHII GCGCGC 1 cut(s) 116
BssMI GATC 1 cut(s) 153
BssNI GRCGYC 4 cut(s) 87, 162, 234, 635
BssT1I CCWWGG 2 cut(s) 174, 592
Bst2UI CCWGG 1 cut(s) 251
Bst4CI ACNGT 2 cut(s) 277, 514
BstACI GRCGYC 4 cut(s) 87, 162, 234, 635
BstAPI GCANNNNNTGC 2 cut(s) 346, 550
BstAUI TGTACA 1 cut(s) 306
BstBAI YACGTR 1 cut(s) 739
BstDEI CTNAG 1 cut(s) 662
BstDSI CCRYGG 2 cut(s) 133, 592
BstF5I GGATG 3 cut(s) 194, 408, 751
BstFNI CGCG 8 cut(s) 116, 118, 144, 317, 425, 430, 548, 603
BstH2I RGCGCY 1 cut(s) 90
BstHHI GCGC 6 cut(s) 13, 89, 118, 120, 430, 603
BstKTI GATC 1 cut(s) 156
BstMAI GTCTC 1 cut(s) 644
BstMBI GATC 1 cut(s) 153
BstMCI CGRYCG 1 cut(s) 569
BstMWI GCNNNNNNNGC 8 cut(s) 93, 113, 210, 346, 427, 431, 550, 609
BstNI CCWGG 1 cut(s) 251
BstNSI RCATGY 1 cut(s) 414
BstSCI CCNGG 4 cut(s) 249, 395, 396, 619
BstUI CGCG 8 cut(s) 116, 118, 144, 317, 425, 430, 548, 603
BstV1I GCAGC 3 cut(s) 200, 471, 592
BsuRI GGCC 7 cut(s) 74, 180, 191, 291, 590, 721, 792
BtgI CCRYGG 2 cut(s) 133, 592
BtgZI GCGATG 1 cut(s) 449
BtrI CACGTC 1 cut(s) 301
BtsCI GGATG 3 cut(s) 194, 408, 751
BtsI GCAGTG 1 cut(s) 226
BtsIMutI CAGTG 2 cut(s) 226, 237
CfoI GCGC 6 cut(s) 13, 89, 118, 120, 430, 603
Cfr10I RCCGGY 1 cut(s) 788
Cfr13I GGNCC 4 cut(s) 178, 247, 589, 719
Cfr9I CCCGGG 1 cut(s) 396
CseI GACGC 2 cut(s) 133, 643
CsiI ACCWGGT 1 cut(s) 249
Csp6I GTAC 4 cut(s) 286, 307, 471, 839
CspCI CAANNNNNGTGG 2 cut(s) 465, 500
CviAII CATG 6 cut(s) 28, 366, 411, 520, 593, 849
CviQI GTAC 4 cut(s) 286, 307, 471, 839
DdeI CTNAG 1 cut(s) 662
DinI GGCGCC 1 cut(s) 88
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
DraI TTTAAA 1 cut(s) 37
DraIII CACNNNGTG 1 cut(s) 550
DrdI GACNNNNNNGTC 1 cut(s) 275
DseDI GACNNNNNNGTC 1 cut(s) 275
EaeI YGGCCR 4 cut(s) 72, 189, 289, 790
EciI GGCGGA 3 cut(s) 503, 515, 758
Ecl136II GAGCTC 1 cut(s) 140
Eco130I CCWWGG 2 cut(s) 174, 592
Eco24I GRGCYC 1 cut(s) 142
Eco47I GGWCC 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 140
Eco72I CACGTG 1 cut(s) 739
Eco88I CYCGRG 1 cut(s) 396
EcoICRI GAGCTC 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 249
EcoT14I CCWWGG 2 cut(s) 174, 592
EcoT38I GRGCYC 1 cut(s) 142
EgeI GGCGCC 1 cut(s) 88
EheI GGCGCC 1 cut(s) 88
ErhI CCWWGG 2 cut(s) 174, 592
FaeI CATG 6 cut(s) 31, 369, 414, 523, 596, 852
FaqI GGGAC 2 cut(s) 523, 646
FatI CATG 6 cut(s) 27, 365, 410, 519, 592, 848
FauI CCCGC 2 cut(s) 310, 500
FblI GTMKAC 1 cut(s) 267
Fnu4HI GCNGC 8 cut(s) 90, 214, 408, 426, 460, 581, 588, 638
FokI GGATG 3 cut(s) 181, 415, 758
FriOI GRGCYC 1 cut(s) 142
Fsp4HI GCNGC 8 cut(s) 90, 214, 408, 426, 460, 581, 588, 638
FspBI CTAG 1 cut(s) 263
GlaI GCGC 6 cut(s) 12, 88, 117, 119, 429, 602
GluI GCNGC 8 cut(s) 90, 214, 408, 426, 460, 581, 588, 638
GsaI CCCAGC 1 cut(s) 557
GsuI CTGGAG 1 cut(s) 371
HaeII RGCGCY 1 cut(s) 90
HaeIII GGCC 7 cut(s) 74, 180, 191, 291, 590, 721, 792
HapII CCGG 3 cut(s) 397, 620, 789
HgaI GACGC 2 cut(s) 133, 643
HhaI GCGC 6 cut(s) 13, 89, 118, 120, 430, 603
Hin1I GRCGYC 4 cut(s) 87, 162, 234, 635
Hin1II CATG 6 cut(s) 31, 369, 414, 523, 596, 852
Hin6I GCGC 6 cut(s) 11, 87, 116, 118, 428, 601
HinP1I GCGC 6 cut(s) 11, 87, 116, 118, 428, 601
HincII GTYRAC 2 cut(s) 268, 726
HindII GTYRAC 2 cut(s) 268, 726
HindIII AAGCTT 1 cut(s) 659
HinfI GANTC 4 cut(s) 257, 269, 450, 773
HpaII CCGG 3 cut(s) 397, 620, 789
HphI GGTGA 5 cut(s) 103, 391, 400, 526, 778
Hpy166II GTNNAC 6 cut(s) 226, 268, 391, 471, 607, 726
Hpy188I TCNGA 3 cut(s) 455, 706, 769
Hpy8I GTNNAC 6 cut(s) 226, 268, 391, 471, 607, 726
Hpy99I CGWCG 6 cut(s) 149, 164, 236, 281, 302, 337
HpyAV CCTTC 3 cut(s) 337, 439, 673
HpyCH4III ACNGT 2 cut(s) 277, 514
HpyCH4IV ACGT 5 cut(s) 162, 222, 234, 300, 738
HpyCH4V TGCA 4 cut(s) 107, 216, 340, 580
HpyF10VI GCNNNNNNNGC 8 cut(s) 93, 113, 210, 346, 427, 431, 550, 609
HpyF3I CTNAG 1 cut(s) 662
HpySE526I ACGT 5 cut(s) 162, 222, 234, 300, 738
Hsp92I GRCGYC 4 cut(s) 87, 162, 234, 635
Hsp92II CATG 6 cut(s) 31, 369, 414, 523, 596, 852
HspAI GCGC 6 cut(s) 11, 87, 116, 118, 428, 601
KasI GGCGCC 1 cut(s) 86
Kzo9I GATC 1 cut(s) 153
LmnI GCTCC 4 cut(s) 63, 137, 209, 352
Lsp1109I GCAGC 3 cut(s) 200, 471, 592
LweI GCATC 2 cut(s) 160, 736
MabI ACCWGGT 1 cut(s) 249
MaeI CTAG 1 cut(s) 263
MaeII ACGT 5 cut(s) 162, 222, 234, 300, 738
MaeIII GTNAC 4 cut(s) 79, 109, 235, 784
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MboII GAAGA 1 cut(s) 683
MhlI GDGCHC 1 cut(s) 142
MlsI TGGCCA 2 cut(s) 74, 191
MluCI AATT 1 cut(s) 796
MluNI TGGCCA 2 cut(s) 74, 191
Mly113I GGCGCC 1 cut(s) 87
MlyI GAGTC 3 cut(s) 263, 459, 767
MmeI TCCRAC 1 cut(s) 747
MnlI CCTC 6 cut(s) 238, 340, 379, 449, 661, 763
Mox20I TGGCCA 2 cut(s) 74, 191
MscI TGGCCA 2 cut(s) 74, 191
MseI TTAA 2 cut(s) 36, 657
Msp20I TGGCCA 2 cut(s) 74, 191
MspA1I CMGCKG 5 cut(s) 96, 213, 583, 640, 695
MspI CCGG 3 cut(s) 397, 620, 789
MspR9I CCNGG 4 cut(s) 251, 397, 398, 621
MvaI CCWGG 1 cut(s) 251
MvnI CGCG 8 cut(s) 116, 118, 144, 317, 425, 430, 548, 603
MwoI GCNNNNNNNGC 8 cut(s) 93, 113, 210, 346, 427, 431, 550, 609
NarI GGCGCC 1 cut(s) 87
NciI CCSGG 3 cut(s) 397, 398, 621
NcoI CCATGG 1 cut(s) 592
NdeII GATC 1 cut(s) 153
NlaIII CATG 6 cut(s) 31, 369, 414, 523, 596, 852
NlaIV GGNNCC 3 cut(s) 88, 205, 823
NmeAIII GCCGAG 1 cut(s) 755
NmuCI GTSAC 4 cut(s) 79, 109, 235, 784
NspI RCATGY 1 cut(s) 414
PauI GCGCGC 1 cut(s) 116
PcsI WCGNNNNNNNCGW 6 cut(s) 141, 228, 240, 273, 294, 530
PfeI GAWTC 1 cut(s) 257
PflFI GACNNNGTC 1 cut(s) 251
PflMI CCANNNNNTGG 2 cut(s) 187, 799
PkrI GCNGC 8 cut(s) 91, 215, 409, 427, 461, 582, 589, 639
PleI GAGTC 3 cut(s) 263, 458, 767
PluTI GGCGCC 1 cut(s) 90
PmaCI CACGTG 1 cut(s) 739
PmlI CACGTG 1 cut(s) 739
PpsI GAGTC 3 cut(s) 263, 458, 767
Ppu21I YACGTR 1 cut(s) 739
Psp124BI GAGCTC 1 cut(s) 142
Psp6I CCWGG 1 cut(s) 249
PspCI CACGTG 1 cut(s) 739
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 1 cut(s) 249
PspN4I GGNNCC 3 cut(s) 88, 205, 823
PspPI GGNCC 4 cut(s) 178, 247, 589, 719
PsyI GACNNNGTC 1 cut(s) 251
PteI GCGCGC 1 cut(s) 116
PvuII CAGCTG 1 cut(s) 583
RsaI GTAC 4 cut(s) 287, 308, 472, 840
RsaNI GTAC 4 cut(s) 286, 307, 471, 839
SacI GAGCTC 1 cut(s) 142
SalI GTCGAC 1 cut(s) 266
SaqAI TTAA 2 cut(s) 36, 657
SatI GCNGC 8 cut(s) 90, 214, 408, 426, 460, 581, 588, 638
Sau3AI GATC 1 cut(s) 153
Sau96I GGNCC 4 cut(s) 178, 247, 589, 719
ScaI AGTACT 1 cut(s) 840
SchI GAGTC 3 cut(s) 263, 459, 767
ScrFI CCNGG 4 cut(s) 251, 397, 398, 621
SduI GDGCHC 1 cut(s) 142
SexAI ACCWGGT 1 cut(s) 249
SfaNI GCATC 2 cut(s) 160, 736
SfoI GGCGCC 1 cut(s) 88
SinI GGWCC 1 cut(s) 247
SmaI CCCGGG 1 cut(s) 398
Sse9I AATT 1 cut(s) 796
SspDI GGCGCC 1 cut(s) 86
SspMI CTAG 1 cut(s) 263
SstI GAGCTC 1 cut(s) 142
StyD4I CCNGG 4 cut(s) 249, 395, 396, 619
StyI CCWWGG 2 cut(s) 174, 592
TaaI ACNGT 2 cut(s) 277, 514
TaiI ACGT 5 cut(s) 165, 225, 237, 303, 741
TaqI TCGA 6 cut(s) 255, 267, 279, 297, 372, 539
TasI AATT 1 cut(s) 796
TatI WGTACW 2 cut(s) 306, 838
TauI GCSGC 5 cut(s) 92, 410, 428, 590, 640
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 2 cut(s) 36, 657
Tru9I TTAA 2 cut(s) 36, 657
TscAI CASTG 2 cut(s) 233, 244
TseFI GTSAC 4 cut(s) 79, 109, 235, 784
TseI GCWGC 3 cut(s) 213, 459, 580
Tsp45I GTSAC 4 cut(s) 79, 109, 235, 784
TspGWI ACGGA 3 cut(s) 150, 539, 743
TspMI CCCGGG 1 cut(s) 396
TspRI CASTG 2 cut(s) 233, 244
Tth111I GACNNNGTC 1 cut(s) 251
Van91I CCANNNNNTGG 2 cut(s) 187, 799
VpaK11BI GGWCC 1 cut(s) 247
XceI RCATGY 1 cut(s) 414
XmaI CCCGGG 1 cut(s) 396
XmiI GTMKAC 1 cut(s) 267
XspI CTAG 1 cut(s) 263
ZraI GACGTC 2 cut(s) 163, 235
ZrmI AGTACT 1 cut(s) 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.