Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

36190994 .. 36193213

Gene Structure 2220 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g47870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGCTTCCCCCTTGACATTCTTCCTCATCATCTCCCTCAGTTTCTTCATCACCCTCCCTCAAACCCAAGCAAGAGTACTTCTGTCCCAACCACAACCAACTCCGGCCACCAGCTTCATCTTCCCGAAAGCTGAGTCTACATTTCTCCCTGACCCTTCACCTTTCTTTGCCCCAAACCTCCTCCAAACCCCACTCCCTACAAACTCCTTCTTCCAAAACTTTGTGCTCAACAATGGCGACGATCCCGAGTATTTCCACCCCTACCACTTCAGATCCTCCAACTCTTCCCTCTCTCTTTCCTACCCTAGTCGCCTCGCCACCCCATCTTTCATATCTCAAAACTTCACCGCCCAACTCAGCATCTCCGCCACCCAAAACAACCATGAACGCCACGTAGTCTCTTCCTTTAGTGACCTCAGTGTCACTCTAGACTTCCCCTCCTCCAACCTCACCTTCTTCCTCGTCAAGGGAAGCCCCTACCTGACATGCAACGTGTCCAAACCCACCGCGCTTTCCATCTCCACCGCTCTTTCAGTCACTTCTTTGTCTTCAAACGCTGAACGCACCAAGTTCACGTTAAAGCTCGACAACAGTCAGATATTTCTAGTGTACTCCTCCTCCCCGATTGGTCTCACCATCAGCAACCCATCACTGATCACTTCCGAAGCATTCACCGGGGTTATAAGAGTTGCAATGTTGCCGCCGAGTGGCTCTCAGGATCTTGAGGCAATTCTAGACCAGTTCAGTTCTTCTTACCCGATTTCGGGCGAGGCAGTGTTGACAGGGCCAACGACATTGGAGTATAGATGGGTGAAAGAAGGTAATGGAGATTTGCTTATGCTAGCTCATCCTCTCCATCAACAACTTCTGTCTGTTCAGGACAGTCATGCAGCTGTTCTTGACTATTTCAAGTACACAAGCATTGATGGTGATCTCATAGGCGTGGTGGGAAACTCTTGGGTGCTGAAAGCACAGCCTATTCCAATCTCTTGGCATTCGATTACCGGTGTCAAGGACTTAGTACAGGCATTACCTGAAATAAATGCTGCTCTTTCCAGTGATGTTCAGCTTCTAATTTCGACGCCATTATCGATAACAGGTTCTTACGAATATGGTAAATTGCTCGCCAAGGCAGCGAGGCTGGCGTTGATTGCTGAAGAGGTGGGTTCTAATGATATTGCAGTGATTACAAAGTTTTTGAAGGATGGAATTGAGCCATGGTTGAGTGGGACTTTCAGTGGAAATGGTTTCTTGTATGAAGGTAAATGGGGTGGACTTGTAACAAAAAATGGAGCAGCTGATAAAGGTGCAGATTACGGGTTTGGAGTGTATAATGATCACTATTACCACATTGGTTACTTTCTGTATGCGATTTCAGTAGCTGCGAAATTCGACGTGGATTGGGGGATGAAGTTTAAGGCTCAAGCTTATGCTCTTGCTGGAGATTTCATGAACTTAAACAGACAGGCGGATTCAAGTTACACGCGGTTGAGGAACTTTGATCTGTACAATTTGCATTCATGGGCCGGAGGGGTAACTGAATTTGCAGATGGACGAAATCAAGAGAGCTCAAGTGAGTCAGTGAATGCTTACTACTCGGCTGCATTGATGGGGTTAGCCTATAGAGACACTAATCTCACAGACGCTGCGTCATTGCTTGCAGCACTAGAAATTCAAGCAATTCAAAAGTGGTGGCATGTGCACCAAGGAGATAACATCTACGAAGATGTGTTTGCAAGTGAGAACAAGATCACTGGAATTGTGTGGTCTAATAAGAGGGATAGCAGTCTTTGGTTTGCTTCAGCAGAGTCGAAAGAAATCGGGGTCGGAATTCAGGTGATGCCGATTTCGCCTATCACTGAGGTCTTGTTCTCCAATGCCAGCTATGTTAAGGAACTGGTAGAGTGGACAGCACCGGCTTTGAGTAAGGAGGGAGTTACAGATGCATGGAGAGGTTTTACATATGCTTTGGAAGGGATATACAACAAGGCTGAGGCTTTGCAGAAGATTAAGAACTTGGGTGGCTTTGATGATGGGAACTCACTTACCAATCTTCTCTGGTGGATTCACAGCAGAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

694

Amino Acids

76.03

Weight (kDa)

5.18

Isoelectric Point (pI)

33.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	61 - 330	1.2e-56	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	343 - 689	2.9e-95	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	683
AasI	GACNNNNNNGTC	1 cut(s)	419
AccBSI	CCGCTC	1 cut(s)	527
AccI	GTMKAC	1 cut(s)	137
AccII	CGCG	2 cut(s)	509, 1486
AciI	CCGC	7 cut(s)	348, 366, 507, 525, 701, 1469, 1486
AclWI	GGATC	3 cut(s)	236, 267, 726
AcoI	YGGCCR	1 cut(s)	105
AcsI	RAATTY	4 cut(s)	1388, 1541, 1671, 1830
AcuI	CTGAAG	3 cut(s)	253, 1176, 1785
AcyI	GRCGYC	1 cut(s)	1082
AfaI	GTAC	5 cut(s)	78, 611, 914, 1023, 1508
AfiI	CCNNNNNNNGG	4 cut(s)	466, 707, 763, 764
AflIII	ACRYGT	1 cut(s)	492
AgeI	ACCGGT	1 cut(s)	1004
AgsI	TTSAA	6 cut(s)	552, 910, 1201, 1476, 1676, 1685
AhdI	GACNNNNNGTC	1 cut(s)	1648
AjiI	CACGTC	1 cut(s)	1396
AjuI	GAANNNNNNNTTGG	2 cut(s)	437, 469
Alw21I	GWGCWC	3 cut(s)	228, 1571, 1704
Alw26I	GTCTC	3 cut(s)	403, 635, 1620
Alw44I	GTGCAC	1 cut(s)	1700
AlwI	GGATC	3 cut(s)	236, 267, 726
AlwNI	CAGNNNCTG	2 cut(s)	1382, 1646
Ama87I	CYCGRG	1 cut(s)	245
AoxI	GGCC	3 cut(s)	105, 785, 1524
ApaLI	GTGCAC	1 cut(s)	1700
ApeKI	GCWGC	8 cut(s)	890, 1046, 1133, 1295, 1382, 1601, 1646, 1661
ApoI	RAATTY	4 cut(s)	1388, 1541, 1671, 1830
ArsI	GACNNNNNNTTYG	2 cut(s)	119, 151
AsiGI	ACCGGT	1 cut(s)	1004
AspLEI	GCGC	1 cut(s)	511
AspS9I	GGNCC	2 cut(s)	785, 1524
AsuC2I	CCSGG	1 cut(s)	676
AsuHPI	GGTGA	9 cut(s)	43, 150, 337, 442, 625, 664, 823, 941, 1849
AsuNHI	GCTAGC	1 cut(s)	841
AvaI	CYCGRG	1 cut(s)	245
BaeGI	GKGCMC	1 cut(s)	1704
BanII	GRGCYC	1 cut(s)	1571
BbsI	GAAGAC	1 cut(s)	540
Bbv12I	GWGCWC	3 cut(s)	228, 1571, 1704
BbvCI	CCTCAGC	1 cut(s)	1992
BbvI	GCAGC	8 cut(s)	902, 1033, 1145, 1307, 1369, 1588, 1633, 1673
BclI	TGATCA	2 cut(s)	654, 1336
BcnI	CCSGG	1 cut(s)	676
BcoDI	GTCTC	3 cut(s)	403, 635, 1620
BfaI	CTAG	6 cut(s)	306, 428, 605, 734, 842, 1667
BfmI	CTRYAG	1 cut(s)	1621
BisI	GCNGC	9 cut(s)	701, 891, 1047, 1134, 1296, 1383, 1602, 1647, 1662
BlsI	GCNGC	9 cut(s)	702, 892, 1048, 1135, 1297, 1384, 1603, 1648, 1663
BmcAI	AGTACT	1 cut(s)	78
Bme1390I	CCNGG	1 cut(s)	676
BmeRI	GACNNNNNGTC	1 cut(s)	1648
BmeT110I	CYCGRG	1 cut(s)	245
BmgBI	CACGTC	1 cut(s)	1396
BmgT120I	GGNCC	2 cut(s)	785, 1524
BmrFI	CCNGG	1 cut(s)	676
BmsI	GCATC	3 cut(s)	369, 1830, 1933
BmtI	GCTAGC	1 cut(s)	845
BoxI	GACNNNNGTC	1 cut(s)	591
BpiI	GAAGAC	1 cut(s)	540
BplI	GAGNNNNNCTC	2 cut(s)	697, 729
BpmI	CTGGAG	1 cut(s)	1461
Bpu10I	CCTNAGC	1 cut(s)	1992
BpuEI	CTTGAG	3 cut(s)	743, 1407, 1555
BpuMI	CCSGG	1 cut(s)	676
Bsa29I	ATCGAT	1 cut(s)	1091
BsaAI	YACGTR	1 cut(s)	394
BsaBI	GATNNNNATC	1 cut(s)	930
BsaHI	GRCGYC	1 cut(s)	1082
BsaI	GGTCTC	1 cut(s)	635
BsaJI	CCNNGG	4 cut(s)	675, 1128, 1217, 1705
BsaWI	WCCGGW	1 cut(s)	1004
BsaXI	ACNNNNNCTCC	4 cut(s)	422, 452, 602, 632
Bsc4I	CCNNNNNNNGG	4 cut(s)	466, 707, 763, 764
Bse118I	RCCGGY	2 cut(s)	1004, 1915
Bse1I	ACTGG	4 cut(s)	739, 1056, 1759, 1902
Bse3DI	GCAATG	2 cut(s)	699, 1652
Bse8I	GATNNNNATC	1 cut(s)	930
BseCI	ATCGAT	1 cut(s)	1091
BseDI	CCNNGG	4 cut(s)	675, 1128, 1217, 1705
BseGI	GGATG	3 cut(s)	847, 1210, 1413
BseJI	GATNNNNATC	1 cut(s)	930
BseLI	CCNNNNNNNGG	4 cut(s)	466, 707, 763, 764
BseMI	GCAATG	2 cut(s)	699, 1652
BseMII	CTCAG	7 cut(s)	52, 123, 370, 430, 728, 1851, 1983
BseNI	ACTGG	4 cut(s)	739, 1056, 1759, 1902
BseRI	GAGGAG	4 cut(s)	170, 430, 604, 607
BseSI	GKGCMC	1 cut(s)	1704
BseXI	GCAGC	8 cut(s)	902, 1033, 1145, 1307, 1369, 1588, 1633, 1673
BsgI	GTGCAG	1 cut(s)	1329
Bsh1236I	CGCG	2 cut(s)	509, 1486
BshFI	GGCC	3 cut(s)	107, 787, 1526
BshTI	ACCGGT	1 cut(s)	1004
BshVI	ATCGAT	1 cut(s)	1091
BsiHKAI	GWGCWC	3 cut(s)	228, 1571, 1704
BsiHKCI	CYCGRG	1 cut(s)	245
BsiSI	CCGG	5 cut(s)	104, 675, 1005, 1527, 1916
BslFI	GGGAC	2 cut(s)	70, 1243
BslI	CCNNNNNNNGG	4 cut(s)	466, 707, 763, 764
BsmAI	GTCTC	3 cut(s)	403, 635, 1620
BsmFI	GGGAC	2 cut(s)	70, 1243
BsmI	GAATGC	4 cut(s)	668, 994, 1516, 1591
BsnI	GGCC	3 cut(s)	107, 787, 1526
Bso31I	GGTCTC	1 cut(s)	635
BsoBI	CYCGRG	1 cut(s)	245
Bsp1286I	GDGCHC	3 cut(s)	228, 1571, 1704
Bsp1407I	TGTACA	1 cut(s)	1506
Bsp143I	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
Bsp19I	CCATGG	1 cut(s)	1217
BspACI	CCGC	7 cut(s)	348, 366, 507, 525, 701, 1469, 1486
BspANI	GGCC	3 cut(s)	107, 787, 1526
BspCNI	CTCAG	7 cut(s)	51, 124, 369, 429, 727, 1852, 1984
BspDI	ATCGAT	1 cut(s)	1091
BspFNI	CGCG	2 cut(s)	509, 1486
BspHI	TCATGA	1 cut(s)	1449
BspOI	GCTAGC	1 cut(s)	845
BspPI	GGATC	3 cut(s)	236, 267, 726
BspTNI	GGTCTC	1 cut(s)	635
BsrBI	CCGCTC	1 cut(s)	527
BsrDI	GCAATG	2 cut(s)	699, 1652
BsrFI	RCCGGY	2 cut(s)	1004, 1915
BsrGI	TGTACA	1 cut(s)	1506
BsrI	ACTGG	4 cut(s)	739, 1056, 1759, 1902
BssAI	RCCGGY	2 cut(s)	1004, 1915
BssECI	CCNNGG	4 cut(s)	675, 1128, 1217, 1705
BssMI	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
BssNI	GRCGYC	1 cut(s)	1082
BssT1I	CCWWGG	3 cut(s)	1128, 1217, 1705
Bst4CI	ACNGT	2 cut(s)	593, 884
Bst6I	CTCTTC	3 cut(s)	289, 406, 1152
BstACI	GRCGYC	1 cut(s)	1082
BstAUI	TGTACA	1 cut(s)	1506
BstBAI	YACGTR	1 cut(s)	394
BstC8I	GCNNGC	5 cut(s)	843, 1125, 1143, 1659, 1882
BstDEI	CTNAG	8 cut(s)	38, 132, 356, 416, 714, 1018, 1860, 1992
BstDSI	CCRYGG	1 cut(s)	1217
BstENI	CCTNNNNNAGG	1 cut(s)	464
BstF5I	GGATG	3 cut(s)	847, 1210, 1413
BstFNI	CGCG	2 cut(s)	509, 1486
BstHHI	GCGC	1 cut(s)	511
BstKTI	GATC	8 cut(s)	244, 275, 657, 721, 934, 1339, 1504, 1752
BstMAI	GTCTC	3 cut(s)	403, 635, 1620
BstMBI	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
BstMWI	GCNNNNNNNGC	4 cut(s)	1133, 1142, 1151, 1849
BstNSI	RCATGY	2 cut(s)	489, 1700
BstPAI	GACNNNNGTC	1 cut(s)	591
BstSCI	CCNGG	1 cut(s)	674
BstSFI	CTRYAG	1 cut(s)	1621
BstSLI	GKGCMC	1 cut(s)	1704
BstUI	CGCG	2 cut(s)	509, 1486
BstV1I	GCAGC	8 cut(s)	902, 1033, 1145, 1307, 1369, 1588, 1633, 1673
BstV2I	GAAGAC	1 cut(s)	540
BstX2I	RGATCY	2 cut(s)	272, 718
BstXI	CCANNNNNNTGG	1 cut(s)	990
BstYI	RGATCY	2 cut(s)	272, 718
Bsu15I	ATCGAT	1 cut(s)	1091
BsuRI	GGCC	3 cut(s)	107, 787, 1526
BsuTUI	ATCGAT	1 cut(s)	1091
BtgI	CCRYGG	1 cut(s)	1217
BtrI	CACGTC	1 cut(s)	1396
BtsCI	GGATG	3 cut(s)	847, 1210, 1413
BtsI	GCAGTG	2 cut(s)	780, 1188
BtsIMutI	CAGTG	9 cut(s)	424, 650, 780, 1063, 1188, 1243, 1587, 1752, 1857
Cac8I	GCNNGC	5 cut(s)	843, 1125, 1143, 1659, 1882
CaiI	CAGNNNCTG	2 cut(s)	1382, 1646
CciI	TCATGA	1 cut(s)	1449
CfoI	GCGC	1 cut(s)	511
Cfr10I	RCCGGY	2 cut(s)	1004, 1915
Cfr13I	GGNCC	2 cut(s)	785, 1524
ClaI	ATCGAT	1 cut(s)	1091
CseI	GACGC	3 cut(s)	1090, 1638, 1652
Csp6I	GTAC	5 cut(s)	77, 610, 913, 1022, 1507
CspAI	ACCGGT	1 cut(s)	1004
CspCI	CAANNNNNGTGG	2 cut(s)	1673, 1708
CviAII	CATG	8 cut(s)	383, 486, 887, 1218, 1450, 1521, 1697, 1947
CviQI	GTAC	5 cut(s)	77, 610, 913, 1022, 1507
DdeI	CTNAG	8 cut(s)	38, 132, 356, 416, 714, 1018, 1860, 1992
DpnI	GATC	8 cut(s)	243, 274, 656, 720, 933, 1338, 1503, 1751
DpnII	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
DrdI	GACNNNNNNGTC	1 cut(s)	419
DriI	GACNNNNNGTC	1 cut(s)	1648
DseDI	GACNNNNNNGTC	1 cut(s)	419
EaeI	YGGCCR	1 cut(s)	105
Eam1104I	CTCTTC	3 cut(s)	289, 406, 1152
Eam1105I	GACNNNNNGTC	1 cut(s)	1648
EarI	CTCTTC	3 cut(s)	289, 406, 1152
EciI	GGCGGA	2 cut(s)	355, 1484
Ecl136II	GAGCTC	1 cut(s)	1569
Eco130I	CCWWGG	3 cut(s)	1128, 1217, 1705
Eco24I	GRGCYC	1 cut(s)	1571
Eco31I	GGTCTC	1 cut(s)	635
Eco53kI	GAGCTC	1 cut(s)	1569
Eco57I	CTGAAG	3 cut(s)	253, 1176, 1785
Eco88I	CYCGRG	1 cut(s)	245
EcoICRI	GAGCTC	1 cut(s)	1569
EcoNI	CCTNNNNNAGG	1 cut(s)	464
EcoRI	GAATTC	1 cut(s)	1830
EcoT14I	CCWWGG	3 cut(s)	1128, 1217, 1705
EcoT22I	ATGCAT	1 cut(s)	1948
EcoT38I	GRGCYC	1 cut(s)	1571
ErhI	CCWWGG	3 cut(s)	1128, 1217, 1705
FaeI	CATG	8 cut(s)	386, 489, 890, 1221, 1453, 1524, 1700, 1950
FaqI	GGGAC	2 cut(s)	70, 1243
FatI	CATG	8 cut(s)	382, 485, 886, 1217, 1449, 1520, 1696, 1946
FauNDI	CATATG	1 cut(s)	1963
FbaI	TGATCA	2 cut(s)	654, 1336
FblI	GTMKAC	1 cut(s)	137
Fnu4HI	GCNGC	9 cut(s)	701, 891, 1047, 1134, 1296, 1383, 1602, 1647, 1662
FokI	GGATG	3 cut(s)	834, 1217, 1420
FriOI	GRGCYC	1 cut(s)	1571
Fsp4HI	GCNGC	9 cut(s)	701, 891, 1047, 1134, 1296, 1383, 1602, 1647, 1662
FspBI	CTAG	6 cut(s)	306, 428, 605, 734, 842, 1667
GlaI	GCGC	1 cut(s)	510
GluI	GCNGC	9 cut(s)	701, 891, 1047, 1134, 1296, 1383, 1602, 1647, 1662
GsuI	CTGGAG	1 cut(s)	1461
HaeIII	GGCC	3 cut(s)	107, 787, 1526
HapII	CCGG	5 cut(s)	104, 675, 1005, 1527, 1916
HgaI	GACGC	3 cut(s)	1090, 1638, 1652
HhaI	GCGC	1 cut(s)	511
Hin1I	GRCGYC	1 cut(s)	1082
Hin1II	CATG	8 cut(s)	386, 489, 890, 1221, 1453, 1524, 1700, 1950
Hin6I	GCGC	1 cut(s)	509
HinP1I	GCGC	1 cut(s)	509
HincII	GTYRAC	1 cut(s)	780
HindII	GTYRAC	1 cut(s)	780
HindIII	AAGCTT	1 cut(s)	1425
HinfI	GANTC	5 cut(s)	134, 1472, 1577, 1808, 2065
HpaII	CCGG	5 cut(s)	104, 675, 1005, 1527, 1916
HphI	GGTGA	9 cut(s)	43, 150, 337, 442, 625, 664, 823, 941, 1849
Hpy166II	GTNNAC	8 cut(s)	138, 573, 610, 780, 915, 1274, 1702, 1908
Hpy188I	TCNGA	4 cut(s)	272, 597, 664, 1829
Hpy8I	GTNNAC	8 cut(s)	138, 573, 610, 780, 915, 1274, 1702, 1908
Hpy99I	CGWCG	3 cut(s)	242, 1084, 1397
HpyAV	CCTTC	7 cut(s)	165, 217, 463, 812, 1195, 1253, 1967
HpyCH4III	ACNGT	2 cut(s)	593, 884
HpyCH4IV	ACGT	4 cut(s)	393, 492, 575, 1395
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1133, 1142, 1151, 1849
HpyF3I	CTNAG	8 cut(s)	38, 132, 356, 416, 714, 1018, 1860, 1992
HpySE526I	ACGT	4 cut(s)	393, 492, 575, 1395
Hsp92I	GRCGYC	1 cut(s)	1082
Hsp92II	CATG	8 cut(s)	386, 489, 890, 1221, 1453, 1524, 1700, 1950
HspAI	GCGC	1 cut(s)	509
Ksp22I	TGATCA	2 cut(s)	654, 1336
Kzo9I	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
LmnI	GCTCC	1 cut(s)	1292
Lsp1109I	GCAGC	8 cut(s)	902, 1033, 1145, 1307, 1369, 1588, 1633, 1673
LweI	GCATC	3 cut(s)	369, 1830, 1933
MaeI	CTAG	6 cut(s)	306, 428, 605, 734, 842, 1667
MaeII	ACGT	4 cut(s)	393, 492, 575, 1395
MaeIII	GTNAC	8 cut(s)	410, 421, 535, 1279, 1355, 1478, 1534, 1936
MalI	GATC	8 cut(s)	243, 274, 656, 720, 933, 1338, 1503, 1751
MbiI	CCGCTC	1 cut(s)	527
MboI	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
MflI	RGATCY	2 cut(s)	272, 718
MhlI	GDGCHC	3 cut(s)	228, 1571, 1704
MlyI	GAGTC	3 cut(s)	143, 1586, 1817
MmeI	TCCRAC	3 cut(s)	303, 468, 1807
Mph1103I	ATGCAT	1 cut(s)	1948
MseI	TTAA	5 cut(s)	578, 1416, 1457, 1890, 2010
MslI	CAYNNNNRTG	1 cut(s)	941
MspA1I	CMGCKG	2 cut(s)	893, 1298
MspI	CCGG	5 cut(s)	104, 675, 1005, 1527, 1916
MspR9I	CCNGG	1 cut(s)	676
Mva1269I	GAATGC	4 cut(s)	668, 994, 1516, 1591
MvnI	CGCG	2 cut(s)	509, 1486
MwoI	GCNNNNNNNGC	4 cut(s)	1133, 1142, 1151, 1849
NciI	CCSGG	1 cut(s)	676
NcoI	CCATGG	1 cut(s)	1217
NdeI	CATATG	1 cut(s)	1963
NdeII	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
NheI	GCTAGC	1 cut(s)	841
NlaIII	CATG	8 cut(s)	386, 489, 890, 1221, 1453, 1524, 1700, 1950
NmeAIII	GCCGAG	2 cut(s)	729, 1577
NmuCI	GTSAC	3 cut(s)	410, 421, 535
NsiI	ATGCAT	1 cut(s)	1948
NspI	RCATGY	2 cut(s)	489, 1700
PagI	TCATGA	1 cut(s)	1449
PcsI	WCGNNNNNNNCGW	1 cut(s)	1088
PctI	GAATGC	4 cut(s)	668, 994, 1516, 1591
PfeI	GAWTC	2 cut(s)	1472, 2065
PinAI	ACCGGT	1 cut(s)	1004
PkrI	GCNGC	9 cut(s)	702, 892, 1048, 1135, 1297, 1384, 1603, 1648, 1663
PleI	GAGTC	3 cut(s)	142, 1585, 1816
PpsI	GAGTC	3 cut(s)	142, 1585, 1816
Ppu21I	YACGTR	1 cut(s)	394
PshAI	GACNNNNGTC	1 cut(s)	591
PsiI	TTATAA	1 cut(s)	683
Psp124BI	GAGCTC	1 cut(s)	1571
PspPI	GGNCC	2 cut(s)	785, 1524
PstNI	CAGNNNCTG	2 cut(s)	1382, 1646
PsuI	RGATCY	2 cut(s)	272, 718
PvuII	CAGCTG	2 cut(s)	893, 1298
RsaI	GTAC	5 cut(s)	78, 611, 914, 1023, 1508
RsaNI	GTAC	5 cut(s)	77, 610, 913, 1022, 1507
RseI	CAYNNNNRTG	1 cut(s)	941
SacI	GAGCTC	1 cut(s)	1571
SaqAI	TTAA	5 cut(s)	578, 1416, 1457, 1890, 2010
SatI	GCNGC	9 cut(s)	701, 891, 1047, 1134, 1296, 1383, 1602, 1647, 1662
Sau3AI	GATC	8 cut(s)	241, 272, 654, 718, 931, 1336, 1501, 1749
Sau96I	GGNCC	2 cut(s)	785, 1524
ScaI	AGTACT	1 cut(s)	78
SchI	GAGTC	3 cut(s)	143, 1586, 1817
ScrFI	CCNGG	1 cut(s)	676
SduI	GDGCHC	3 cut(s)	228, 1571, 1704
SfaNI	GCATC	3 cut(s)	369, 1830, 1933
SfcI	CTRYAG	1 cut(s)	1621
SmiMI	CAYNNNNRTG	1 cut(s)	941
SmlI	CTYRAG	3 cut(s)	722, 1422, 1570
SmoI	CTYRAG	3 cut(s)	722, 1422, 1570
SsiI	CCGC	7 cut(s)	348, 366, 507, 525, 701, 1469, 1486
SspMI	CTAG	6 cut(s)	306, 428, 605, 734, 842, 1667
SstI	GAGCTC	1 cut(s)	1571
StyD4I	CCNGG	1 cut(s)	674
StyI	CCWWGG	3 cut(s)	1128, 1217, 1705
TaaI	ACNGT	2 cut(s)	593, 884
TaiI	ACGT	4 cut(s)	396, 495, 578, 1398
TaqI	TCGA	6 cut(s)	585, 998, 1079, 1091, 1392, 1811
TatI	WGTACW	5 cut(s)	76, 609, 912, 1021, 1506
TauI	GCSGC	1 cut(s)	703
TfiI	GAWTC	2 cut(s)	1472, 2065
Tru1I	TTAA	5 cut(s)	578, 1416, 1457, 1890, 2010
Tru9I	TTAA	5 cut(s)	578, 1416, 1457, 1890, 2010
TscAI	CASTG	9 cut(s)	424, 657, 780, 1063, 1188, 1243, 1587, 1759, 1864
TseFI	GTSAC	3 cut(s)	410, 421, 535
TseI	GCWGC	8 cut(s)	890, 1046, 1133, 1295, 1382, 1601, 1646, 1661
Tsp45I	GTSAC	3 cut(s)	410, 421, 535
TspDTI	ATGAA	9 cut(s)	37, 106, 319, 399, 1272, 1424, 1438, 1466, 1509
TspRI	CASTG	9 cut(s)	424, 657, 780, 1063, 1188, 1243, 1587, 1759, 1864
VneI	GTGCAC	1 cut(s)	1700
XagI	CCTNNNNNAGG	1 cut(s)	464
XapI	RAATTY	4 cut(s)	1388, 1541, 1671, 1830
XbaI	TCTAGA	2 cut(s)	427, 733
XceI	RCATGY	2 cut(s)	489, 1700
XmiI	GTMKAC	1 cut(s)	137
XspI	CTAG	6 cut(s)	306, 428, 605, 734, 842, 1667
ZrmI	AGTACT	1 cut(s)	78
Zsp2I	ATGCAT	1 cut(s)	1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.