Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

5297454 .. 5299670

Gene Structure 2217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g07350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGTTGAAAAAAGTGAGAAGAAAAATCAAAACCTTAATCACCAAGAGTTTCAAAAAACCCAAGAAAAATCCCTATAAACCACCACCCCCTCAACCATTTTCATTTCCATCACCACCCCCTCCCGAAGAAGAACCCCAAACTATGTCGCCACCACCGCAGCAAACTCTCAGGCCACCCGCCACCGCCGGCCCATTCCTTTTCCCCCAAACCCAATCCACCGTGCTCCCCGACCCTTCCAACTTCTTCTCCCCAAACCTCCTCTCCACCCCTCTCCCCACCAACTCCTTCTTCCAAAACTTCGCCCTCAAAAACGGCGACCAACCCGAGTACTTCCACCCCTACGCCGTTAAATCCTCCTCCGCCTCCCTAACCATCTGCTACCCATCTCGCTTCTCCACCTCCGCCTTCATATATCAAGTCTTCGTCGCCGATCTCGCCATCTCCGCGGCCCAAAAGCCCGATTCCCCACAACCCCACAAAATCTCCTCCTTCAACGACCTCAGCATCACATTGGATTTCCCCTCCTCCAACCTCCGCTTCTTCCTCGTCCGCGGCAGCCCATTCATCACCTGCTCTGTTTCCAACTCCACCTCTCTTTCAATCTTCACCATCCACGCAATCCTCTCGTGTGAATCAAACGGCTCAAAGACCAAATACACCATCAAGCTCAACAGCAACCAGACATGGCTCGTATACACTTCCTCCCCGATCGATTTGACCACCAGCGGCCTTTCACTGATCACCTCCAATGGGTTTTCTGGGATTGTTCGGATTGCGATATTGCCGGATTCGAACCCGAAATTGGAGGCCAGCCTTGATCGGTTCAGTTCTTGCTACCCGGTTTCCGGAGAAGCGGTTTTCACAAAGCCGTTTGTTGTGGAGTACAGATGGGAGAAGAAAGGATGGGGCGATTTGCTTATGCTTGCTCATCCTCTGCACCTCCAGCTTCTCTCCGGCGAGGATTCTCACGTCACTGTTTTGGAGGATTTCAAGTTCAAGAGCATTGATGGGGACCTTGTTGGCGTTGTTGGCGATTCGTGGGCGCTGAAACCCGACCCTGTTTCGATCACCTGGCATTCGAGTCAAGGAGTTAGGGAACATTCGTATGAGGAAATTGTTTCTGCGCTTGTTAAAGATGTTGGGGATCTGAATTCGAGTGGGATAGCTACAACGTCTTCGTATTTTTATGGGAAATTGATCGCGAGGGCGGCGAGGCTGGCTTTGATTGCTGAGGAGGTGGCTTATTTGGATGTGATTCCGGCGATTAGGAAGTTCTTGAAGGAAACGATTGAGCCGTGGTTGGACGGAACTTTCCCGGGAAATGGTTTCTTGTATGATAAGATTTGGGGTGGCATTGTCACGAAACAAGGGGCGACTGATTCGGGTGCAGATTTCGGGTTTGGAGTGTACAATGATCACCATTATCATCTGGGCTACTTTGTTTATGGGATTTCAGTGCTTGCGAAAATTGATCCTGCTTGGGGGATGAAGTATCGGGCTAAAGCTTATTCGCTCGCTTTTGATTATATGACGGTAGGCAGGCGATCACATTCACATTATCCACGCTTGAGGTGCTTTGATTTTTACAAATTGCACTCGTGGGCAGGCGGGTTAACTGAGTTTGCAGATGGTCGTAATCAGGAGAGCACGAGTGAGGCAGTGAATGCCTACTATTCAGCTGCATTGTTGGGATTAGCTTATGGAGACACGCATCTTGTGGCCACGGGATCACTGCTTGCAGCTTTGGAGACTCAGGCGGCGCAAATGTGGTGGCACGTAAAAGAGGGAGGTAACATGTATGAGGAGGATTTCACAAGGGAAAATCGTGTGGTTGGAGTTGTATGGAATAACAAGAGGGACAGCGGACTTTGGTTCGCTCCCCCGGAGTGGAAAGAGTGCAGGCTTGGAATTCAGTTGCTACCGCTACTGCCGATCACTGAGGCCTTGTTTTCAGATGTTGGCTTTGTTAAGGATCTTGTGAAATGGACACTACCGGCTTTGAGTAGGGAGGGAGTTGGGGAAGGATGGAAAGGATTTGTCTATTCCTTGGAAGGGATTTACGACAAAGAACACGCTTTGGGGAAGATAAGGAATTTGAATGGTTACGATGATGGTAACTCGCTTACTAATCTTCTGTGGTGGATCCACAGCAGAGGAGAGGCAGGAGCGGAATTCGGACTTGGACATAACGTTTGTTGGTCTAGGCACTATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

739

Amino Acids

82.19

Weight (kDa)

6.88

Isoelectric Point (pI)

40.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	87 - 358	2e-63	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	365 - 715	8e-105	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	578
Acc36I	ACCTGC	1 cut(s)	578
AccBSI	CCGCTC	1 cut(s)	2168
AccI	GTMKAC	1 cut(s)	693
AccII	CGCG	3 cut(s)	446, 552, 1202
AccIII	TCCGGA	1 cut(s)	845
AclI	AACGTT	1 cut(s)	2190
AclWI	GGATC	6 cut(s)	1152, 1466, 1735, 1980, 2137, 2150
AcoI	YGGCCR	1 cut(s)	1719
AcsI	RAATTY	4 cut(s)	1150, 1908, 2092, 2171
AfaI	GTAC	3 cut(s)	329, 884, 1409
AfiI	CCNNNNNNNGG	7 cut(s)	750, 802, 845, 1322, 1481, 1887, 2052
AflIII	ACRYGT	1 cut(s)	1794
AgsI	TTSAA	8 cut(s)	7, 52, 493, 600, 991, 997, 1279, 2098
AjiI	CACGTC	1 cut(s)	970
AjnI	CCWGG	1 cut(s)	1070
AjuI	GAANNNNNNNTTGG	8 cut(s)	272, 304, 521, 553, 785, 817, 2163, 2195
AloI	GAACNNNNNNTCC	2 cut(s)	977, 1009
AluBI	AGCT	7 cut(s)	667, 946, 1166, 1505, 1679, 1697, 1742
AluI	AGCT	7 cut(s)	667, 946, 1166, 1505, 1679, 1697, 1742
Alw21I	GWGCWC	2 cut(s)	225, 1649
Alw26I	GTCTC	2 cut(s)	1698, 1742
AlwI	GGATC	6 cut(s)	1152, 1466, 1735, 1980, 2137, 2150
Ama87I	CYCGRG	2 cut(s)	323, 1315
Aor13HI	TCCGGA	1 cut(s)	845
AoxI	GGCC	7 cut(s)	170, 187, 447, 727, 807, 1719, 1941
ApeKI	GCWGC	4 cut(s)	157, 555, 1679, 1739
ApoI	RAATTY	4 cut(s)	1150, 1908, 2092, 2171
ArsI	GACNNNNNNTTYG	2 cut(s)	2175, 2207
AspLEI	GCGC	3 cut(s)	1045, 1126, 1762
AspS9I	GGNCC	3 cut(s)	188, 448, 1012
AsuC2I	CCSGG	4 cut(s)	839, 1316, 1317, 1883
AsuHPI	GGTGA	7 cut(s)	31, 102, 559, 598, 733, 1060, 1409
AsuII	TTCGAA	1 cut(s)	791
AvaI	CYCGRG	2 cut(s)	323, 1315
AvaII	GGWCC	1 cut(s)	1012
BalI	TGGCCA	1 cut(s)	1721
BamHI	GGATCC	1 cut(s)	2142
BauI	CACGAG	3 cut(s)	625, 1597, 1648
BbsI	GAAGAC	2 cut(s)	412, 1167
Bbv12I	GWGCWC	2 cut(s)	225, 1649
BbvCI	CCTCAGC	2 cut(s)	500, 1230
BbvI	GCAGC	4 cut(s)	169, 567, 1666, 1751
BceAI	ACGGC	5 cut(s)	328, 329, 655, 853, 1279
BcgI	CGANNNNNNTGC	2 cut(s)	606, 640
BciT130I	CCWGG	1 cut(s)	1072
BclI	TGATCA	2 cut(s)	738, 1414
BcnI	CCSGG	4 cut(s)	839, 1316, 1317, 1883
BcoDI	GTCTC	2 cut(s)	1698, 1742
BfaI	CTAG	1 cut(s)	2202
BfoI	RGCGCY	1 cut(s)	1046
BfuAI	ACCTGC	1 cut(s)	578
BisI	GCNGC	9 cut(s)	158, 447, 553, 556, 727, 1209, 1680, 1740, 1758
BlsI	GCNGC	9 cut(s)	159, 448, 554, 557, 728, 1210, 1681, 1741, 1759
BmcAI	AGTACT	1 cut(s)	329
Bme1390I	CCNGG	5 cut(s)	839, 1072, 1316, 1317, 1883
Bme18I	GGWCC	1 cut(s)	1012
BmeT110I	CYCGRG	2 cut(s)	323, 1315
BmgBI	CACGTC	1 cut(s)	970
BmgT120I	GGNCC	3 cut(s)	188, 448, 1012
BmiI	GGNNCC	2 cut(s)	1013, 2144
BmrFI	CCNGG	5 cut(s)	839, 1072, 1316, 1317, 1883
BmsI	GCATC	2 cut(s)	513, 1720
BpiI	GAAGAC	2 cut(s)	412, 1167
BpmI	CTGGAG	1 cut(s)	926
Bpu10I	CCTNAGC	2 cut(s)	500, 1230
Bpu14I	TTCGAA	1 cut(s)	791
BpuEI	CTTGAG	1 cut(s)	1588
BpuMI	CCSGG	4 cut(s)	839, 1316, 1317, 1883
Bsa29I	ATCGAT	1 cut(s)	711
BsaAI	YACGTR	1 cut(s)	1777
BsaJI	CCNNGG	7 cut(s)	444, 550, 1295, 1315, 1722, 1881, 2046
BsaWI	WCCGGW	1 cut(s)	845
Bsc4I	CCNNNNNNNGG	7 cut(s)	750, 802, 845, 1322, 1481, 1887, 2052
Bse118I	RCCGGY	2 cut(s)	185, 1993
BseAI	TCCGGA	1 cut(s)	845
BseBI	CCWGG	1 cut(s)	1072
BseCI	ATCGAT	1 cut(s)	711
BseDI	CCNNGG	7 cut(s)	444, 550, 1295, 1315, 1722, 1881, 2046
BseGI	GGATG	6 cut(s)	609, 908, 928, 1255, 1491, 2030
BseLI	CCNNNNNNNGG	7 cut(s)	750, 802, 845, 1322, 1481, 1887, 2052
BseMII	CTCAG	6 cut(s)	181, 514, 1221, 1608, 1766, 1929
BseRI	GAGGAG	7 cut(s)	248, 346, 475, 514, 1247, 1817, 2169
BseXI	GCAGC	4 cut(s)	169, 567, 1666, 1751
BsgI	GTGCAG	3 cut(s)	920, 1407, 1918
Bsh1236I	CGCG	3 cut(s)	446, 552, 1202
Bsh1285I	CGRYCG	1 cut(s)	711
BshFI	GGCC	7 cut(s)	172, 189, 449, 729, 809, 1721, 1943
BshVI	ATCGAT	1 cut(s)	711
BsiEI	CGRYCG	1 cut(s)	711
BsiHKAI	GWGCWC	2 cut(s)	225, 1649
BsiHKCI	CYCGRG	2 cut(s)	323, 1315
BsiSI	CCGG	9 cut(s)	186, 785, 839, 846, 954, 1259, 1316, 1883, 1994
BslFI	GGGAC	2 cut(s)	1025, 1871
BslI	CCNNNNNNNGG	7 cut(s)	750, 802, 845, 1322, 1481, 1887, 2052
BsmAI	GTCTC	2 cut(s)	1698, 1742
BsmFI	GGGAC	2 cut(s)	1025, 1871
BsmI	GAATGC	2 cut(s)	1075, 1669
BsnI	GGCC	7 cut(s)	172, 189, 449, 729, 809, 1721, 1943
BsoBI	CYCGRG	2 cut(s)	323, 1315
Bsp119I	TTCGAA	1 cut(s)	791
Bsp1286I	GDGCHC	2 cut(s)	225, 1649
Bsp13I	TCCGGA	1 cut(s)	845
Bsp1407I	TGTACA	1 cut(s)	1407
Bsp68I	TCGCGA	1 cut(s)	1202
BspANI	GGCC	7 cut(s)	172, 189, 449, 729, 809, 1721, 1943
BspCNI	CTCAG	6 cut(s)	180, 513, 1222, 1609, 1765, 1930
BspDI	ATCGAT	1 cut(s)	711
BspEI	TCCGGA	1 cut(s)	845
BspFNI	CGCG	3 cut(s)	446, 552, 1202
BspLI	GGNNCC	2 cut(s)	1013, 2144
BspMI	ACCTGC	1 cut(s)	578
BspPI	GGATC	6 cut(s)	1152, 1466, 1735, 1980, 2137, 2150
BspT104I	TTCGAA	1 cut(s)	791
BsrBI	CCGCTC	1 cut(s)	2168
BsrFI	RCCGGY	2 cut(s)	185, 1993
BsrGI	TGTACA	1 cut(s)	1407
BssAI	RCCGGY	2 cut(s)	185, 1993
BssECI	CCNNGG	7 cut(s)	444, 550, 1295, 1315, 1722, 1881, 2046
BssNAI	GTATAC	1 cut(s)	694
BssSI	CACGAG	3 cut(s)	625, 1597, 1648
BssT1I	CCWWGG	1 cut(s)	2046
Bst1107I	GTATAC	1 cut(s)	694
Bst2BI	CACGAG	3 cut(s)	625, 1597, 1648
Bst2UI	CCWGG	1 cut(s)	1072
Bst4CI	ACNGT	3 cut(s)	220, 976, 1534
BstAPI	GCANNNNNTGC	1 cut(s)	1664
BstAUI	TGTACA	1 cut(s)	1407
BstBAI	YACGTR	1 cut(s)	1777
BstBI	TTCGAA	1 cut(s)	791
BstDEI	CTNAG	6 cut(s)	167, 500, 1230, 1617, 1752, 1938
BstDSI	CCRYGG	4 cut(s)	444, 550, 1295, 1722
BstF5I	GGATG	6 cut(s)	609, 908, 928, 1255, 1491, 2030
BstFNI	CGCG	3 cut(s)	446, 552, 1202
BstH2I	RGCGCY	1 cut(s)	1046
BstHHI	GCGC	3 cut(s)	1045, 1126, 1762
BstMAI	GTCTC	2 cut(s)	1698, 1742
BstMCI	CGRYCG	1 cut(s)	711
BstNI	CCWGG	1 cut(s)	1072
BstNSI	RCATGY	1 cut(s)	1798
BstSCI	CCNGG	5 cut(s)	837, 1070, 1314, 1315, 1881
BstUI	CGCG	3 cut(s)	446, 552, 1202
BstV1I	GCAGC	4 cut(s)	169, 567, 1666, 1751
BstV2I	GAAGAC	2 cut(s)	412, 1167
BstX2I	RGATCY	3 cut(s)	1144, 1972, 2142
BstYI	RGATCY	3 cut(s)	1144, 1972, 2142
BstZ17I	GTATAC	1 cut(s)	694
Bsu15I	ATCGAT	1 cut(s)	711
BsuRI	GGCC	7 cut(s)	172, 189, 449, 729, 809, 1721, 1943
BsuTUI	ATCGAT	1 cut(s)	711
BtgI	CCRYGG	4 cut(s)	444, 550, 1295, 1722
BtrI	CACGTC	1 cut(s)	970
BtsCI	GGATG	6 cut(s)	609, 908, 928, 1255, 1491, 2030
BtsI	GCAGTG	2 cut(s)	1665, 1730
BtsIMutI	CAGTG	6 cut(s)	734, 972, 1461, 1665, 1730, 1935
BtuMI	TCGCGA	1 cut(s)	1202
BveI	ACCTGC	1 cut(s)	578
CfoI	GCGC	3 cut(s)	1045, 1126, 1762
Cfr10I	RCCGGY	2 cut(s)	185, 1993
Cfr13I	GGNCC	3 cut(s)	188, 448, 1012
Cfr42I	CCGCGG	2 cut(s)	447, 553
Cfr9I	CCCGGG	1 cut(s)	1315
ClaI	ATCGAT	1 cut(s)	711
Csp6I	GTAC	3 cut(s)	328, 883, 1408
CspCI	CAANNNNNGTGG	2 cut(s)	1751, 1786
CviAII	CATG	2 cut(s)	684, 1795
CviQI	GTAC	3 cut(s)	328, 883, 1408
DdeI	CTNAG	6 cut(s)	167, 500, 1230, 1617, 1752, 1938
EaeI	YGGCCR	1 cut(s)	1719
EciI	GGCGGA	2 cut(s)	349, 391
Eco130I	CCWWGG	1 cut(s)	2046
Eco147I	AGGCCT	1 cut(s)	1943
Eco47I	GGWCC	1 cut(s)	1012
Eco88I	CYCGRG	2 cut(s)	323, 1315
EcoO109I	RGGNCCY	1 cut(s)	1012
EcoRI	GAATTC	3 cut(s)	1150, 1908, 2171
EcoRII	CCWGG	1 cut(s)	1070
EcoT14I	CCWWGG	1 cut(s)	2046
ErhI	CCWWGG	1 cut(s)	2046
FaeI	CATG	2 cut(s)	687, 1798
FaqI	GGGAC	2 cut(s)	1025, 1871
FatI	CATG	2 cut(s)	683, 1794
FauI	CCCGC	2 cut(s)	184, 1601
FbaI	TGATCA	2 cut(s)	738, 1414
FblI	GTMKAC	1 cut(s)	693
Fnu4HI	GCNGC	9 cut(s)	158, 447, 553, 556, 727, 1209, 1680, 1740, 1758
FokI	GGATG	6 cut(s)	596, 915, 915, 1262, 1498, 2037
Fsp4HI	GCNGC	9 cut(s)	158, 447, 553, 556, 727, 1209, 1680, 1740, 1758
FspBI	CTAG	1 cut(s)	2202
GlaI	GCGC	3 cut(s)	1044, 1125, 1761
GluI	GCNGC	9 cut(s)	158, 447, 553, 556, 727, 1209, 1680, 1740, 1758
GsuI	CTGGAG	1 cut(s)	926
HaeII	RGCGCY	1 cut(s)	1046
HaeIII	GGCC	7 cut(s)	172, 189, 449, 729, 809, 1721, 1943
HapII	CCGG	9 cut(s)	186, 785, 839, 846, 954, 1259, 1316, 1883, 1994
HhaI	GCGC	3 cut(s)	1045, 1126, 1762
Hin1II	CATG	2 cut(s)	687, 1798
Hin6I	GCGC	3 cut(s)	1043, 1124, 1760
HinP1I	GCGC	3 cut(s)	1043, 1124, 1760
HincII	GTYRAC	1 cut(s)	1614
HindII	GTYRAC	1 cut(s)	1614
HindIII	AAGCTT	1 cut(s)	1503
HinfI	GANTC	9 cut(s)	461, 632, 788, 962, 1034, 1081, 1255, 1379, 1750
HpaI	GTTAAC	1 cut(s)	1614
HpaII	CCGG	9 cut(s)	186, 785, 839, 846, 954, 1259, 1316, 1883, 1994
HphI	GGTGA	7 cut(s)	31, 102, 559, 598, 733, 1060, 1409
Hpy166II	GTNNAC	3 cut(s)	694, 1408, 1614
Hpy188I	TCNGA	4 cut(s)	771, 1149, 1954, 2177
Hpy188III	TCNNGA	7 cut(s)	122, 846, 997, 1201, 1276, 1360, 1640
Hpy8I	GTNNAC	3 cut(s)	694, 1408, 1614
Hpy99I	CGWCG	1 cut(s)	428
HpyAV	CCTTC	7 cut(s)	243, 295, 415, 499, 1273, 2015, 2045
HpyCH4III	ACNGT	3 cut(s)	220, 976, 1534
HpyCH4IV	ACGT	4 cut(s)	969, 1172, 1776, 2190
HpyCH4V	TGCA	7 cut(s)	937, 1388, 1594, 1625, 1682, 1739, 1899
HpyF3I	CTNAG	6 cut(s)	167, 500, 1230, 1617, 1752, 1938
HpySE526I	ACGT	4 cut(s)	969, 1172, 1776, 2190
Hsp92II	CATG	2 cut(s)	687, 1798
HspAI	GCGC	3 cut(s)	1043, 1124, 1760
Kpn2I	TCCGGA	1 cut(s)	845
KroI	GCCGGC	1 cut(s)	185
KroNI	GCCGGC	1 cut(s)	187
Ksp22I	TGATCA	2 cut(s)	738, 1414
KspAI	GTTAAC	1 cut(s)	1614
KspI	CCGCGG	2 cut(s)	447, 553
LmnI	GCTCC	3 cut(s)	228, 1882, 2165
Lsp1109I	GCAGC	4 cut(s)	169, 567, 1666, 1751
LweI	GCATC	2 cut(s)	513, 1720
MaeI	CTAG	1 cut(s)	2202
MaeII	ACGT	4 cut(s)	969, 1172, 1776, 2190
MaeIII	GTNAC	5 cut(s)	970, 1357, 1790, 2102, 2114
MbiI	CCGCTC	1 cut(s)	2168
MflI	RGATCY	3 cut(s)	1144, 1972, 2142
MhlI	GDGCHC	2 cut(s)	225, 1649
MlsI	TGGCCA	1 cut(s)	1721
MluCI	AATT	9 cut(s)	800, 1113, 1150, 1193, 1467, 1589, 1908, 2092, 2171
MluNI	TGGCCA	1 cut(s)	1721
MlyI	GAGTC	2 cut(s)	1090, 1744
MmeI	TCCRAC	5 cut(s)	261, 552, 606, 1281, 1813
Mox20I	TGGCCA	1 cut(s)	1721
MroI	TCCGGA	1 cut(s)	845
MroNI	GCCGGC	1 cut(s)	185
MscI	TGGCCA	1 cut(s)	1721
MseI	TTAA	6 cut(s)	35, 348, 1131, 1613, 1968, 2215
MslI	CAYNNNNRTG	1 cut(s)	1104
Msp20I	TGGCCA	1 cut(s)	1721
MspA1I	CMGCKG	5 cut(s)	446, 552, 726, 1679, 1863
MspI	CCGG	9 cut(s)	186, 785, 839, 846, 954, 1259, 1316, 1883, 1994
MspR9I	CCNGG	5 cut(s)	839, 1072, 1316, 1317, 1883
Mva1269I	GAATGC	2 cut(s)	1075, 1669
MvaI	CCWGG	1 cut(s)	1072
MvnI	CGCG	3 cut(s)	446, 552, 1202
NaeI	GCCGGC	1 cut(s)	187
NciI	CCSGG	4 cut(s)	839, 1316, 1317, 1883
NgoMIV	GCCGGC	1 cut(s)	185
NlaIII	CATG	2 cut(s)	687, 1798
NlaIV	GGNNCC	2 cut(s)	1013, 2144
NmuCI	GTSAC	2 cut(s)	970, 1357
NruI	TCGCGA	1 cut(s)	1202
NspI	RCATGY	1 cut(s)	1798
NspV	TTCGAA	1 cut(s)	791
PaqCI	CACCTGC	1 cut(s)	578
PceI	AGGCCT	1 cut(s)	1943
PciI	ACATGT	1 cut(s)	1794
PcsI	WCGNNNNNNNCGW	1 cut(s)	1292
PctI	GAATGC	2 cut(s)	1075, 1669
PdiI	GCCGGC	1 cut(s)	187
PfeI	GAWTC	7 cut(s)	461, 632, 788, 962, 1034, 1255, 1379
PkrI	GCNGC	9 cut(s)	159, 448, 554, 557, 728, 1210, 1681, 1741, 1759
Ple19I	CGATCG	1 cut(s)	711
PleI	GAGTC	2 cut(s)	1089, 1744
PpsI	GAGTC	2 cut(s)	1089, 1744
Ppu21I	YACGTR	1 cut(s)	1777
PpuMI	RGGWCCY	1 cut(s)	1012
PscI	ACATGT	1 cut(s)	1794
Psp1406I	AACGTT	1 cut(s)	2190
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	1 cut(s)	1070
PspGI	CCWGG	1 cut(s)	1070
PspN4I	GGNNCC	2 cut(s)	1013, 2144
PspPI	GGNCC	3 cut(s)	188, 448, 1012
PspPPI	RGGWCCY	1 cut(s)	1012
PsuI	RGATCY	3 cut(s)	1144, 1972, 2142
PvuI	CGATCG	1 cut(s)	711
PvuII	CAGCTG	1 cut(s)	1679
RruI	TCGCGA	1 cut(s)	1202
RsaI	GTAC	3 cut(s)	329, 884, 1409
RsaNI	GTAC	3 cut(s)	328, 883, 1408
RseI	CAYNNNNRTG	1 cut(s)	1104
SacII	CCGCGG	2 cut(s)	447, 553
SaqAI	TTAA	6 cut(s)	35, 348, 1131, 1613, 1968, 2215
SatI	GCNGC	9 cut(s)	158, 447, 553, 556, 727, 1209, 1680, 1740, 1758
Sau96I	GGNCC	3 cut(s)	188, 448, 1012
ScaI	AGTACT	1 cut(s)	329
SchI	GAGTC	2 cut(s)	1090, 1744
ScrFI	CCNGG	5 cut(s)	839, 1072, 1316, 1317, 1883
SduI	GDGCHC	2 cut(s)	225, 1649
SfaNI	GCATC	2 cut(s)	513, 1720
Sfr303I	CCGCGG	2 cut(s)	447, 553
SfuI	TTCGAA	1 cut(s)	791
SgrBI	CCGCGG	2 cut(s)	447, 553
SinI	GGWCC	1 cut(s)	1012
SmaI	CCCGGG	1 cut(s)	1317
SmiMI	CAYNNNNRTG	1 cut(s)	1104
SmlI	CTYRAG	1 cut(s)	1567
SmoI	CTYRAG	1 cut(s)	1567
Sse9I	AATT	9 cut(s)	800, 1113, 1150, 1193, 1467, 1589, 1908, 2092, 2171
SseBI	AGGCCT	1 cut(s)	1943
SspMI	CTAG	1 cut(s)	2202
StuI	AGGCCT	1 cut(s)	1943
StyD4I	CCNGG	5 cut(s)	837, 1070, 1314, 1315, 1881
StyI	CCWWGG	1 cut(s)	2046
TaaI	ACNGT	3 cut(s)	220, 976, 1534
TaiI	ACGT	4 cut(s)	972, 1175, 1779, 2193
TaqI	TCGA	5 cut(s)	711, 791, 1064, 1079, 1154
TasI	AATT	9 cut(s)	800, 1113, 1150, 1193, 1467, 1589, 1908, 2092, 2171
TatI	WGTACW	3 cut(s)	327, 882, 1407
TauI	GCSGC	5 cut(s)	449, 555, 729, 1211, 1760
TfiI	GAWTC	7 cut(s)	461, 632, 788, 962, 1034, 1255, 1379
Tru1I	TTAA	6 cut(s)	35, 348, 1131, 1613, 1968, 2215
Tru9I	TTAA	6 cut(s)	35, 348, 1131, 1613, 1968, 2215
TscAI	CASTG	6 cut(s)	741, 979, 1461, 1665, 1737, 1942
TseFI	GTSAC	2 cut(s)	970, 1357
TseI	GCWGC	4 cut(s)	157, 555, 1679, 1739
Tsp45I	GTSAC	2 cut(s)	970, 1357
TspDTI	ATGAA	4 cut(s)	90, 397, 553, 1502
TspGWI	ACGGA	1 cut(s)	1320
TspMI	CCCGGG	1 cut(s)	1315
TspRI	CASTG	6 cut(s)	741, 979, 1461, 1665, 1737, 1942
VpaK11BI	GGWCC	1 cut(s)	1012
XapI	RAATTY	4 cut(s)	1150, 1908, 2092, 2171
XceI	RCATGY	1 cut(s)	1798
XmaI	CCCGGG	1 cut(s)	1315
XmiI	GTMKAC	1 cut(s)	693
XspI	CTAG	1 cut(s)	2202
ZrmI	AGTACT	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.