Rh2DG617800

Endo-1,3(4)-beta-glucanase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
84798509 .. 84801063
2555 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG617800.1

Sequence Viewer

Length: 2067 bp
ATGGCGTCGTTTAAGATGACTTTGTTCATGTTCATTTTGGCCCTCAGTTTCTCCTTCCTTCAAACCCAAGCTAGAGTATTACTATCCAAACCAGCTCCGGCTGGCTTTCCCTTCCCTCAAACCCAATCCACAGTTGTCCCTGACCCTTCACCTTTCTTTGCCTCAAACCTCCTCCAAACTCCACTCCCCACAAACTCTTTCTTCCAAAACTTTGTACTCAACAATGGCGACGTAGCCGAATATTTCCACCCCTACAGCTTCAGATTCTCCAACTCATCCCTCACTCTATCTTATCCAACCCGTATCGCAACCTCCGCTTCCGTACTCCAGAACTTCACAGCTGACCTTAGCATCTCCGCCACACAAAACAACCAGCAACAACATCAGGTAGTCTCCTCCTTCAGTGACCTCGGCGTCACTCTTGACATCCCCTCCTCCAATCTCCGCTTCTTCCTTGTCAAGGGAAGCCCCTATCTGACATGCAATGTGTCCAATCCCACCGCGCTTTCCATCTCCACCACTCATGCAATCACCACACTATCTCCAAATACAGACCGCAACAAGTACACAATCAGTCTCAACAACAACCCGACATGGCTTCTGTACTCGTCCTCCCCGATTGGTCTCACCAATAGCAACCCTTCACTGATCACATCTGATTCATTTTCCGGCGTTATAAGGGTTGCATTGTTGCCAGGTTCTGATTTTGAGAAGGTTCTAGACCAGCACAGTTCTTCTTACCCGGTTTCCGGTGAAGCCCTCTTCACAGAGGCGTTTACTTTGGAGTATACATGGGAGAAAGCAGGGAATGAGGACTTGCTTATGCTAGCACATCCTCTTCATCTTCAGCTTCTTTCTGTTGAGGACAGAAATGTCACTGTTCTTGACCAATTCAAGTACAGAAGCATTGATGGTGACCTTGTTGGTATTATAGGCGACTCTTGGGTGTTGAAAACACAGCCTATTCCAGTCACTTGGCATTCCATTAATGGTATCAAAGACAATGCATCAATACCAGAGATCATTGCCGCTCTTTCGAAAGATGTTCAGGCTATAACTTCGACGCCAATATCAATAACGGCTTCATATTTCTATGGCAAGTTGATTGCCAAGGCGGCGAGGCTTGCTTTGATTGCTGAAGAGGTGGGTTCTAATGATGTGATTCCAACCATTAAAAAGTTCTTGGAGGATGCAGTTGAGCCATGGTTGAGTGGGACTTTCGCTGGGAATGGTTTCTTGTATGAAGGTAAATGGGGTGGACTTGTAACGAAAAATGGAGCAGTGGATAAAAATGCTGACTTTGGGTTTGGAATATATAATGATCACCATTACCACATTGGCTACTTTCTTTATGCAATCTCAGTGGTTGCAAAGCTTGACCAGGCTTGGGGCTTAAAATACAAGGAGCAAGCTTATTCTCTTGCAGGAGATTTCATGAACTTAAACAGGCAGCCAGATTCAAGTTATCCGCTGTTGAGGAACTTTGATCTCTACAATTTGCATTCATGGGCTGGAGGGTTAACTGAATTTGCAGATGGACGGGATCAAGAGAGCACAAGTGAGGCAGTGAATGCTTACTACTCGGCTGCATTGATGGGGTTAGCCTATGGAGACACTAATCTCACCGCCACCGCATCATTGCTTGCAGCACTTGAAATCCAAGCAGCTCAAAAGTGGTGGCATGTGCACCAAGGAGATAACATGTATGAGGACGTTTTCTCAAATGCAAATGCGATCACAGGAGTAGTGTGGTCTAATAAGAGAGACACTGGACTTTGGTTTGCTCCTCCAGAGTCTAAAGAAATCAGGCTTGGAATTCAGGTTCTTCCGATTTCGCCTATCACTGAGGTCTTGTTCTCTAATGTCAGCTATGTCAAGGAACTGGTAGAATGGACAGCACCGGCTTTGACTAGGGAGGGAGTTACAGATGCATGGAGAGGGTTTGATTATTCCTTGGAAGGGATATATAACAAAGAAGATGCTCTGCCGAAGATTGAAAATTTGGGTGGTTTTGATGATGGGAACTCACTTACCAATCTTCTGTGGTGGATCCACAGCAGAGGTTAG

Protein Analysis

688

Amino Acids

75.91

Weight (kDa)

4.99

Isoelectric Point (pI)

30.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_81 PF03639 56 - 326 4e-59 Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C PF17652 337 - 684 4.3e-102 Glycosyl hydrolase family 81 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000403)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18310 AT5G15870
fragaria_vesca FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 677
AasI GACNNNNNNGTC 2 cut(s) 413, 872
AccBSI CCGCTC 1 cut(s) 1031
AccI GTMKAC 1 cut(s) 788
AccII CGCG 1 cut(s) 503
AclWI GGATC 3 cut(s) 1551, 2044, 2057
AcsI RAATTY 3 cut(s) 1526, 1815, 1999
AcuI CTGAAG 4 cut(s) 244, 385, 830, 1158
AcyI GRCGYC 3 cut(s) 5, 414, 1064
AfaI GTAC 5 cut(s) 216, 324, 566, 605, 899
AfiI CCNNNNNNNGG 4 cut(s) 460, 749, 1387, 1959
AflIII ACRYGT 1 cut(s) 1701
AgsI TTSAA 6 cut(s) 62, 895, 952, 1461, 1655, 1997
AjnI CCWGG 2 cut(s) 694, 1380
AjuI GAANNNNNNNTTGG 4 cut(s) 431, 463, 1794, 1826
AloI GAACNNNNNNTCC 2 cut(s) 1806, 1838
AluBI AGCT 9 cut(s) 71, 95, 258, 341, 850, 1375, 1412, 1667, 1869
AluI AGCT 9 cut(s) 71, 95, 258, 341, 850, 1375, 1412, 1667, 1869
Alw21I GWGCWC 2 cut(s) 1556, 1689
Alw26I GTCTC 5 cut(s) 397, 581, 629, 1605, 1758
Alw44I GTGCAC 1 cut(s) 1685
AlwI GGATC 3 cut(s) 1551, 2044, 2057
AlwNI CAGNNNCTG 1 cut(s) 701
AoxI GGCC 1 cut(s) 39
ApaLI GTGCAC 1 cut(s) 1685
ApeKI GCWGC 4 cut(s) 1450, 1586, 1646, 1664
ApoI RAATTY 3 cut(s) 1526, 1815, 1999
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
AseI ATTAAT 1 cut(s) 987
Asp700I GAANNNNTTC 1 cut(s) 1232
AspLEI GCGC 1 cut(s) 505
AspS9I GGNCC 1 cut(s) 40
AsuC2I CCSGG 1 cut(s) 743
AsuHPI GGTGA 7 cut(s) 141, 523, 619, 764, 926, 1316, 1615
AsuII TTCGAA 1 cut(s) 1037
AsuNHI GCTAGC 1 cut(s) 826
BaeGI GKGCMC 1 cut(s) 1689
BamHI GGATCC 1 cut(s) 2049
Bbv12I GWGCWC 2 cut(s) 1556, 1689
BbvI GCAGC 4 cut(s) 1462, 1573, 1658, 1676
BccI CCATC 5 cut(s) 518, 905, 1529, 1588, 2012
BceAI ACGGC 1 cut(s) 1095
BciT130I CCWGG 2 cut(s) 696, 1382
BclI TGATCA 2 cut(s) 648, 1321
BcnI CCSGG 1 cut(s) 743
BcoDI GTCTC 5 cut(s) 397, 581, 629, 1605, 1758
BfaI CTAG 4 cut(s) 72, 719, 827, 1911
BfmI CTRYAG 1 cut(s) 253
BglI GCCNNNNNGGC 1 cut(s) 1115
BisI GCNGC 6 cut(s) 1029, 1116, 1451, 1587, 1647, 1665
BlsI GCNGC 6 cut(s) 1030, 1117, 1452, 1588, 1648, 1666
Bme1390I CCNGG 3 cut(s) 696, 743, 1382
BmgT120I GGNCC 1 cut(s) 40
BmiI GGNNCC 1 cut(s) 2051
BmrFI CCNGG 3 cut(s) 696, 743, 1382
BmsI GCATC 6 cut(s) 360, 1016, 1180, 1643, 1918, 1969
BmtI GCTAGC 1 cut(s) 830
BpmI CTGGAG 3 cut(s) 311, 1533, 1773
Bpu10I CCTNAGC 1 cut(s) 347
Bpu14I TTCGAA 1 cut(s) 1037
BpuMI CCSGG 1 cut(s) 743
BsaHI GRCGYC 3 cut(s) 5, 414, 1064
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 5 cut(s) 409, 1110, 1202, 1690, 1953
BsaWI WCCGGW 1 cut(s) 749
BsaXI ACNNNNNCTCC 6 cut(s) 416, 446, 526, 556, 596, 626
Bsc4I CCNNNNNNNGG 4 cut(s) 460, 749, 1387, 1959
Bse118I RCCGGY 1 cut(s) 1900
Bse1I ACTGG 3 cut(s) 968, 1774, 1887
Bse3DI GCAATG 3 cut(s) 490, 1023, 1637
BseBI CCWGG 2 cut(s) 696, 1382
BseDI CCNNGG 5 cut(s) 409, 1110, 1202, 1690, 1953
BseGI GGATG 4 cut(s) 275, 426, 832, 1195
BseLI CCNNNNNNNGG 4 cut(s) 460, 749, 1387, 1959
BseMI GCAATG 3 cut(s) 490, 1023, 1637
BseMII CTCAG 3 cut(s) 58, 1374, 1836
BseNI ACTGG 3 cut(s) 968, 1774, 1887
BseRI GAGGAG 4 cut(s) 161, 385, 424, 1776
BseSI GKGCMC 1 cut(s) 1689
BseXI GCAGC 4 cut(s) 1462, 1573, 1658, 1676
BseYI CCCAGC 1 cut(s) 1223
Bsh1236I CGCG 1 cut(s) 503
BshFI GGCC 1 cut(s) 41
BsiHKAI GWGCWC 2 cut(s) 1556, 1689
BsiSI CCGG 5 cut(s) 98, 669, 743, 750, 1901
BslFI GGGAC 2 cut(s) 122, 1228
BslI CCNNNNNNNGG 4 cut(s) 460, 749, 1387, 1959
BsmAI GTCTC 5 cut(s) 397, 581, 629, 1605, 1758
BsmFI GGGAC 2 cut(s) 122, 1228
BsmI GAATGC 3 cut(s) 979, 1501, 1576
BsnI GGCC 1 cut(s) 41
Bso31I GGTCTC 1 cut(s) 629
Bsp119I TTCGAA 1 cut(s) 1037
Bsp1286I GDGCHC 2 cut(s) 1556, 1689
Bsp143I GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
Bsp19I CCATGG 1 cut(s) 1202
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 3 cut(s) 57, 1373, 1837
BspFNI CGCG 1 cut(s) 503
BspHI TCATGA 1 cut(s) 1434
BspLI GGNNCC 1 cut(s) 2051
BspOI GCTAGC 1 cut(s) 830
BspPI GGATC 3 cut(s) 1551, 2044, 2057
BspT104I TTCGAA 1 cut(s) 1037
BspTNI GGTCTC 1 cut(s) 629
BsrBI CCGCTC 1 cut(s) 1031
BsrDI GCAATG 3 cut(s) 490, 1023, 1637
BsrFI RCCGGY 1 cut(s) 1900
BsrI ACTGG 3 cut(s) 968, 1774, 1887
BssAI RCCGGY 1 cut(s) 1900
BssECI CCNNGG 5 cut(s) 409, 1110, 1202, 1690, 1953
BssMI GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
BssNAI GTATAC 1 cut(s) 789
BssNI GRCGYC 3 cut(s) 5, 414, 1064
BssT1I CCWWGG 4 cut(s) 1110, 1202, 1690, 1953
Bst1107I GTATAC 1 cut(s) 789
Bst2UI CCWGG 2 cut(s) 696, 1382
Bst4CI ACNGT 3 cut(s) 133, 731, 880
Bst6I CTCTTC 3 cut(s) 767, 843, 1134
BstACI GRCGYC 3 cut(s) 5, 414, 1064
BstAPI GCANNNNNTGC 1 cut(s) 1571
BstBI TTCGAA 1 cut(s) 1037
BstC8I GCNNGC 5 cut(s) 103, 828, 1125, 1410, 1644
BstDEI CTNAG 4 cut(s) 44, 347, 1360, 1845
BstDSI CCRYGG 1 cut(s) 1202
BstEII GGTNACC 1 cut(s) 914
BstENI CCTNNNNNAGG 1 cut(s) 458
BstF5I GGATG 4 cut(s) 275, 426, 832, 1195
BstFNI CGCG 1 cut(s) 503
BstHHI GCGC 1 cut(s) 505
BstKTI GATC 7 cut(s) 651, 1023, 1324, 1489, 1546, 1737, 2052
BstMAI GTCTC 5 cut(s) 397, 581, 629, 1605, 1758
BstMBI GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
BstMWI GCNNNNNNNGC 5 cut(s) 314, 1115, 1124, 1133, 1571
BstNI CCWGG 2 cut(s) 696, 1382
BstNSI RCATGY 3 cut(s) 483, 1685, 1705
BstPI GGTNACC 1 cut(s) 914
BstSCI CCNGG 3 cut(s) 694, 741, 1380
BstSFI CTRYAG 1 cut(s) 253
BstSLI GKGCMC 1 cut(s) 1689
BstUI CGCG 1 cut(s) 503
BstV1I GCAGC 4 cut(s) 1462, 1573, 1658, 1676
BstX2I RGATCY 1 cut(s) 2049
BstXI CCANNNNNNTGG 1 cut(s) 975
BstYI RGATCY 1 cut(s) 2049
BstZ17I GTATAC 1 cut(s) 789
BsuRI GGCC 1 cut(s) 41
BtgI CCRYGG 1 cut(s) 1202
BtsCI GGATG 4 cut(s) 275, 426, 832, 1195
BtsI GCAGTG 2 cut(s) 1287, 1572
BtsIMutI CAGTG 8 cut(s) 409, 644, 876, 1287, 1368, 1572, 1767, 1842
Cac8I GCNNGC 5 cut(s) 103, 828, 1125, 1410, 1644
CaiI CAGNNNCTG 1 cut(s) 701
CciI TCATGA 1 cut(s) 1434
CfoI GCGC 1 cut(s) 505
Cfr10I RCCGGY 1 cut(s) 1900
Cfr13I GGNCC 1 cut(s) 40
CseI GACGC 2 cut(s) 403, 1072
Csp6I GTAC 5 cut(s) 215, 323, 565, 604, 898
CspCI CAANNNNNGTGG 4 cut(s) 1344, 1379, 1658, 1693
CviQI GTAC 5 cut(s) 215, 323, 565, 604, 898
DdeI CTNAG 4 cut(s) 44, 347, 1360, 1845
DpnI GATC 7 cut(s) 650, 1022, 1323, 1488, 1545, 1736, 2051
DpnII GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
DrdI GACNNNNNNGTC 2 cut(s) 413, 872
DseDI GACNNNNNNGTC 2 cut(s) 413, 872
Eam1104I CTCTTC 3 cut(s) 767, 843, 1134
EarI CTCTTC 3 cut(s) 767, 843, 1134
EciI GGCGGA 1 cut(s) 346
Eco130I CCWWGG 4 cut(s) 1110, 1202, 1690, 1953
Eco31I GGTCTC 1 cut(s) 629
Eco57I CTGAAG 4 cut(s) 244, 385, 830, 1158
Eco91I GGTNACC 1 cut(s) 914
EcoNI CCTNNNNNAGG 1 cut(s) 458
EcoO65I GGTNACC 1 cut(s) 914
EcoRI GAATTC 1 cut(s) 1815
EcoRII CCWGG 2 cut(s) 694, 1380
EcoT14I CCWWGG 4 cut(s) 1110, 1202, 1690, 1953
EcoT22I ATGCAT 2 cut(s) 1009, 1933
ErhI CCWWGG 4 cut(s) 1110, 1202, 1690, 1953
FaqI GGGAC 2 cut(s) 122, 1228
FbaI TGATCA 2 cut(s) 648, 1321
FblI GTMKAC 1 cut(s) 788
Fnu4HI GCNGC 6 cut(s) 1029, 1116, 1451, 1587, 1647, 1665
FokI GGATG 4 cut(s) 262, 413, 819, 1202
Fsp4HI GCNGC 6 cut(s) 1029, 1116, 1451, 1587, 1647, 1665
FspBI CTAG 4 cut(s) 72, 719, 827, 1911
GlaI GCGC 1 cut(s) 504
GluI GCNGC 6 cut(s) 1029, 1116, 1451, 1587, 1647, 1665
GsaI CCCAGC 1 cut(s) 1227
GsuI CTGGAG 3 cut(s) 311, 1533, 1773
HaeIII GGCC 1 cut(s) 41
HapII CCGG 5 cut(s) 98, 669, 743, 750, 1901
HgaI GACGC 2 cut(s) 403, 1072
HhaI GCGC 1 cut(s) 505
Hin1I GRCGYC 3 cut(s) 5, 414, 1064
Hin6I GCGC 1 cut(s) 503
HinP1I GCGC 1 cut(s) 503
HincII GTYRAC 1 cut(s) 1521
HindII GTYRAC 1 cut(s) 1521
HindIII AAGCTT 2 cut(s) 1373, 1410
HinfI GANTC 6 cut(s) 264, 659, 938, 1162, 1457, 1793
HpaI GTTAAC 1 cut(s) 1521
HpaII CCGG 5 cut(s) 98, 669, 743, 750, 1901
HphI GGTGA 7 cut(s) 141, 523, 619, 764, 926, 1316, 1615
Hpy166II GTNNAC 6 cut(s) 567, 777, 789, 1259, 1521, 1687
Hpy188I TCNGA 5 cut(s) 263, 477, 658, 703, 1830
Hpy188III TCNNGA 7 cut(s) 328, 422, 719, 884, 1435, 1547, 1790
Hpy8I GTNNAC 6 cut(s) 567, 777, 789, 1259, 1521, 1687
Hpy99I CGWCG 3 cut(s) 10, 233, 1066
HpyAV CCTTC 9 cut(s) 64, 68, 121, 156, 409, 651, 706, 1238, 1952
HpyCH4III ACNGT 3 cut(s) 133, 731, 880
HpyCH4IV ACGT 2 cut(s) 231, 1713
HpyF10VI GCNNNNNNNGC 5 cut(s) 314, 1115, 1124, 1133, 1571
HpyF3I CTNAG 4 cut(s) 44, 347, 1360, 1845
HpySE526I ACGT 2 cut(s) 231, 1713
Hsp92I GRCGYC 3 cut(s) 5, 414, 1064
HspAI GCGC 1 cut(s) 503
Ksp22I TGATCA 2 cut(s) 648, 1321
KspAI GTTAAC 1 cut(s) 1521
Kzo9I GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
LmnI GCTCC 4 cut(s) 100, 1277, 1405, 1789
Lsp1109I GCAGC 4 cut(s) 1462, 1573, 1658, 1676
LweI GCATC 6 cut(s) 360, 1016, 1180, 1643, 1918, 1969
MaeI CTAG 4 cut(s) 72, 719, 827, 1911
MaeII ACGT 2 cut(s) 231, 1713
MaeIII GTNAC 7 cut(s) 404, 415, 874, 914, 970, 1264, 1921
MalI GATC 7 cut(s) 650, 1022, 1323, 1488, 1545, 1736, 2051
MbiI CCGCTC 1 cut(s) 1031
MboI GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
MflI RGATCY 1 cut(s) 2049
MhlI GDGCHC 2 cut(s) 1556, 1689
MluCI AATT 5 cut(s) 890, 1495, 1526, 1815, 1999
MlyI GAGTC 2 cut(s) 932, 1802
MmeI TCCRAC 3 cut(s) 294, 320, 1190
Mph1103I ATGCAT 2 cut(s) 1009, 1933
MroXI GAANNNNTTC 1 cut(s) 1232
MseI TTAA 6 cut(s) 12, 987, 1173, 1394, 1442, 1520
MspA1I CMGCKG 2 cut(s) 341, 1471
MspI CCGG 5 cut(s) 98, 669, 743, 750, 1901
MspR9I CCNGG 3 cut(s) 696, 743, 1382
Mva1269I GAATGC 3 cut(s) 979, 1501, 1576
MvaI CCWGG 2 cut(s) 696, 1382
MvnI CGCG 1 cut(s) 503
MwoI GCNNNNNNNGC 5 cut(s) 314, 1115, 1124, 1133, 1571
NciI CCSGG 1 cut(s) 743
NcoI CCATGG 1 cut(s) 1202
NdeII GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
NheI GCTAGC 1 cut(s) 826
NlaIV GGNNCC 1 cut(s) 2051
NmeAIII GCCGAG 2 cut(s) 390, 1562
NmuCI GTSAC 5 cut(s) 404, 415, 874, 914, 970
NsiI ATGCAT 2 cut(s) 1009, 1933
NspI RCATGY 3 cut(s) 483, 1685, 1705
NspV TTCGAA 1 cut(s) 1037
PagI TCATGA 1 cut(s) 1434
PciI ACATGT 1 cut(s) 1701
PcsI WCGNNNNNNNCGW 1 cut(s) 614
PctI GAATGC 3 cut(s) 979, 1501, 1576
PdmI GAANNNNTTC 1 cut(s) 1232
PfeI GAWTC 4 cut(s) 264, 659, 1162, 1457
PkrI GCNGC 6 cut(s) 1030, 1117, 1452, 1588, 1648, 1666
PleI GAGTC 2 cut(s) 932, 1801
PpsI GAGTC 2 cut(s) 932, 1801
PscI ACATGT 1 cut(s) 1701
PshBI ATTAAT 1 cut(s) 987
PsiI TTATAA 1 cut(s) 677
Psp6I CCWGG 2 cut(s) 694, 1380
PspEI GGTNACC 1 cut(s) 914
PspFI CCCAGC 1 cut(s) 1223
PspGI CCWGG 2 cut(s) 694, 1380
PspN4I GGNNCC 1 cut(s) 2051
PspPI GGNCC 1 cut(s) 40
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 1 cut(s) 2049
PvuII CAGCTG 1 cut(s) 341
RsaI GTAC 5 cut(s) 216, 324, 566, 605, 899
RsaNI GTAC 5 cut(s) 215, 323, 565, 604, 898
SaqAI TTAA 6 cut(s) 12, 987, 1173, 1394, 1442, 1520
SatI GCNGC 6 cut(s) 1029, 1116, 1451, 1587, 1647, 1665
Sau3AI GATC 7 cut(s) 648, 1020, 1321, 1486, 1543, 1734, 2049
Sau96I GGNCC 1 cut(s) 40
SchI GAGTC 2 cut(s) 932, 1802
ScrFI CCNGG 3 cut(s) 696, 743, 1382
SduI GDGCHC 2 cut(s) 1556, 1689
SfaNI GCATC 6 cut(s) 360, 1016, 1180, 1643, 1918, 1969
SfcI CTRYAG 1 cut(s) 253
SfuI TTCGAA 1 cut(s) 1037
Sse9I AATT 5 cut(s) 890, 1495, 1526, 1815, 1999
SspI AATATT 1 cut(s) 242
SspMI CTAG 4 cut(s) 72, 719, 827, 1911
StyD4I CCNGG 3 cut(s) 694, 741, 1380
StyI CCWWGG 4 cut(s) 1110, 1202, 1690, 1953
TaaI ACNGT 3 cut(s) 133, 731, 880
TaiI ACGT 2 cut(s) 234, 1716
TaqI TCGA 2 cut(s) 1037, 1061
TasI AATT 5 cut(s) 890, 1495, 1526, 1815, 1999
TatI WGTACW 4 cut(s) 214, 564, 603, 897
TauI GCSGC 2 cut(s) 1031, 1118
TfiI GAWTC 4 cut(s) 264, 659, 1162, 1457
Tru1I TTAA 6 cut(s) 12, 987, 1173, 1394, 1442, 1520
Tru9I TTAA 6 cut(s) 12, 987, 1173, 1394, 1442, 1520
TscAI CASTG 8 cut(s) 409, 651, 883, 1287, 1368, 1572, 1774, 1849
TseFI GTSAC 5 cut(s) 404, 415, 874, 914, 970
TseI GCWGC 4 cut(s) 1450, 1586, 1646, 1664
Tsp45I GTSAC 5 cut(s) 404, 415, 874, 914, 970
TspDTI ATGAA 9 cut(s) 16, 22, 651, 830, 1074, 1257, 1423, 1451, 1494
TspGWI ACGGA 1 cut(s) 310
TspRI CASTG 8 cut(s) 409, 651, 883, 1287, 1368, 1572, 1774, 1849
VneI GTGCAC 1 cut(s) 1685
VspI ATTAAT 1 cut(s) 987
XagI CCTNNNNNAGG 1 cut(s) 458
XapI RAATTY 3 cut(s) 1526, 1815, 1999
XbaI TCTAGA 1 cut(s) 718
XceI RCATGY 3 cut(s) 483, 1685, 1705
XcmI CCANNNNNNNNNTGG 1 cut(s) 1334
XmiI GTMKAC 1 cut(s) 788
XmnI GAANNNNTTC 1 cut(s) 1232
XspI CTAG 4 cut(s) 72, 719, 827, 1911
Zsp2I ATGCAT 2 cut(s) 1009, 1933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.