Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

81725349 .. 81727442

Gene Structure 2094 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53489

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGCTTCCAATAATATGACCTTGATGACATGCTTCCTCATCATCTCCCTCGCTTTTTTCATCCTCCCTCAAACCCAAGCCAGAGTACTACTGTCCGAAACGCAAGCAACTCCGGCCACCGGCTTCCTCTATCCGAAAGCCGAGTCCACAGTTCTCCCTGACCCTTCACCGTTCTTTGCCCCAAGCCTCCTCCAAACCCCACTCCCCACAAACTCTTTCTTCCAAAACTTTGTACTCAACAATGGCGACCAGCCCGAATATTTCCACCCCTACCATTTCAGATCCTCCAACTCCTCCCTCTCTCTCTCCTACCCGACTCGCCTTGCCACCTCCGCTTCCATATCCCAGAACTTCACCCCTGAACTCACCATCTCCGCCACCCAAAACAACCAAGAACGCCATGTAGTCTCTTCCTTCAGTGACCTCGGCGTCACTCTAGACTTCCCCTCCTCCAATCTCCGCTTCTTCCTCGTCAAGGGAAGCCCCTACTTGACATGCAATGTGTCTAATCCCACCGCGCTTTCCATTTCCACCGCTAGTTCAATCACTTCTTTGTTTCCAAACGCTCAACGCAACAAGTACACATTAAAGCTCGACAACAGTCAGACAATGCTGGTGTACTCGTCCTCTCCGATTGGTCTCACCATCAGCAACCCATCACTGATCACTTCCGACGCATTCACCGGGGTTATGAGGGTTGCATTGTTGCCGCCAGGCTCTCAAGATCTCGAGGCAGTTCTAGACCAGTTCAGTTCTTCTTACCCGGTTTCGGGCGAGGCAGTGTTCACAGGGCCTTTTACATTGGAGTATAGATGGGTGAAAGAAGGAAATGGAGATTTGCTTATGCTAGCTCATCCTCTCCATCAACAACTTCTGTCTGTTCAGGACAGTAATGCCACTGTTCTTGACTATCTCAAGTACAGAAGCATTGATGGTGATCTCCTAGGCGTTGTGGGAAACTCTTGGGTGTTGAAAACACAGCCTATTCCAGTCTCTTGGCATTCGATTACAGGTGTCAAGGACCTAGTACAGGCATTACCTGAAATAAAAGCCGCTCTTTCTGGTGACGTTCAGGCTCTAATTTCGACACCAGTATCAACAACAGCTTCATATGAATATGGAAAATTGATTGCCAAGGCGGCAAGGCTGGCTTTGATTGGTGAAGAGGTGGGTGTTAAAGATATTCCAGCCATTACAAAGTTTATGAAGGATGCAATTGAGCCATGGTTGAGTGGGACTTTCAGTGGGAATGGTTTCTTGTATGAAGGTAAATGGGGTGGACTTGTAACGAAAAATGGAGCAGTTGATAAAGGTGCAGATTACGGGTTTGGAGTGTATAATGATCACCATTTCCATCTTGGCTATTTTCTCTATGCGATTTCAGTAGTTGCAAAGCTTGACGTGGATTGGGGGATGAAGTTTAAGGATCAAGCTTATGCTCTTGCTGGGGATTTCATGAACTTAAACAGGCAGCCAGATTCAAGTTACCCGCGGTTGAGGAACTTCGATCTCTACAATTTGCATTCGTGGGCCGGAGGGTTAACTGAATTTGCAGATGGACGAAATCAAGAGAGTACAAGTGAGGCAGTGAATGCTTACTACTCGGCTGCATTGATGGGGTTAGCCTATAGAGACACTAATCTCACTGACACAGCATCATTGCTTGCAGCACTGGAGATTCAGGCAGCTCAAAAGTGGTGGCATGTGCACCAAGGAGATAACATCTATGAGGATGTCTTCGCGAGTCAGAATAAGATCACTGGAATTGTGTGGTCTAATAAGAGGGATACCGGTCTTTGGTTTGCTTCAGCAGAGTCGAAAGAAATCAGGCTTGGAATTCAGGTGCTGCCGATTTCCCCTATCACTGAGGTCTTGTTCTCCAATGCCAGCTATGTTAGGGAGGTTGTAGATTGGACAATACCAGCTCTGAATAGGGAGGGAGTTACGGATGCATGGAGAGGGTTTGCTTATGCCTTGGAAGGGATATACAACAAGGAAGAGGCTTTGCAGAATGTTAAAAACTTGAAAGGTTTTGATGATGGGAACTCACTTTCGAATCTCTTATGGTGGATCCACAGCAGAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

695

Amino Acids

76.54

Weight (kDa)

5.31

Isoelectric Point (pI)

29.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	64 - 332	4e-57	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	345 - 690	7.6e-100	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	428
AccBSI	CCGCTC	1 cut(s)	1055
AccII	CGCG	3 cut(s)	518, 1492, 1742
AclWI	GGATC	4 cut(s)	276, 1434, 2065, 2078
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	2 cut(s)	1547, 1836
AcuI	CTGAAG	2 cut(s)	400, 1791
AcyI	GRCGYC	1 cut(s)	429
AfaI	GTAC	7 cut(s)	87, 234, 581, 620, 920, 1029, 1576
AfiI	CCNNNNNNNGG	7 cut(s)	119, 475, 769, 770, 1030, 1797, 1980
AgeI	ACCGGT	1 cut(s)	1790
AgsI	TTSAA	4 cut(s)	543, 973, 1482, 2026
AjiI	CACGTC	1 cut(s)	1402
AjnI	CCWGG	1 cut(s)	712
AjuI	GAANNNNNNNTTGG	4 cut(s)	446, 478, 1815, 1847
AluBI	AGCT	8 cut(s)	592, 851, 1106, 1396, 1433, 1688, 1890, 1925
AluI	AGCT	8 cut(s)	592, 851, 1106, 1396, 1433, 1688, 1890, 1925
Alw21I	GWGCWC	1 cut(s)	1710
Alw26I	GTCTC	4 cut(s)	412, 644, 997, 1626
Alw44I	GTGCAC	1 cut(s)	1706
AlwI	GGATC	4 cut(s)	276, 1434, 2065, 2078
AlwNI	CAGNNNCTG	1 cut(s)	1846
Ama87I	CYCGRG	1 cut(s)	728
AoxI	GGCC	3 cut(s)	114, 791, 1530
ApaLI	GTGCAC	1 cut(s)	1706
ApeKI	GCWGC	5 cut(s)	1471, 1607, 1667, 1685, 1846
ApoI	RAATTY	2 cut(s)	1547, 1836
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AsiGI	ACCGGT	1 cut(s)	1790
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspA2I	CCTAGG	1 cut(s)	943
AspLEI	GCGC	1 cut(s)	520
AspS9I	GGNCC	3 cut(s)	791, 1021, 1530
AsuC2I	CCSGG	2 cut(s)	685, 764
AsuII	TTCGAA	1 cut(s)	2054
AsuNHI	GCTAGC	1 cut(s)	847
AvaI	CYCGRG	1 cut(s)	728
AvaII	GGWCC	1 cut(s)	1021
AvrII	CCTAGG	1 cut(s)	943
BaeGI	GKGCMC	1 cut(s)	1710
BaeI	ACNNNNGTAYC	2 cut(s)	1077, 1110
BamHI	GGATCC	1 cut(s)	2070
BbsI	GAAGAC	1 cut(s)	1729
Bbv12I	GWGCWC	1 cut(s)	1710
BbvI	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
BciT130I	CCWGG	1 cut(s)	714
BciVI	GTATCC	1 cut(s)	1780
BclI	TGATCA	2 cut(s)	663, 1342
BcnI	CCSGG	2 cut(s)	685, 764
BcoDI	GTCTC	4 cut(s)	412, 644, 997, 1626
BfaI	CTAG	7 cut(s)	437, 537, 740, 848, 944, 1025, 2086
BfmI	CTRYAG	1 cut(s)	1627
BfuI	GTATCC	1 cut(s)	1780
BglI	GCCNNNNNGGC	1 cut(s)	1139
BglII	AGATCT	1 cut(s)	724
BisI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
BlnI	CCTAGG	1 cut(s)	943
BlsI	GCNGC	8 cut(s)	711, 1054, 1141, 1473, 1609, 1669, 1687, 1848
BmcAI	AGTACT	1 cut(s)	87
Bme1390I	CCNGG	3 cut(s)	685, 714, 764
Bme18I	GGWCC	1 cut(s)	1021
BmeT110I	CYCGRG	1 cut(s)	728
BmgBI	CACGTC	1 cut(s)	1402
BmgT120I	GGNCC	3 cut(s)	791, 1021, 1530
BmiI	GGNNCC	1 cut(s)	2072
BmrFI	CCNGG	3 cut(s)	685, 714, 764
BmsI	GCATC	3 cut(s)	1201, 1664, 1939
BmtI	GCTAGC	1 cut(s)	851
BoxI	GACNNNNGTC	1 cut(s)	600
BpiI	GAAGAC	1 cut(s)	1729
BpmI	CTGGAG	1 cut(s)	1694
Bpu14I	TTCGAA	1 cut(s)	2054
BpuEI	CTTGAG	2 cut(s)	705, 899
BpuMI	CCSGG	2 cut(s)	685, 764
BsaBI	GATNNNNATC	1 cut(s)	936
BsaHI	GRCGYC	1 cut(s)	429
BsaI	GGTCTC	1 cut(s)	644
BsaJI	CCNNGG	8 cut(s)	424, 684, 943, 1134, 1223, 1490, 1711, 1974
BsaWI	WCCGGW	1 cut(s)	1790
BsaXI	ACNNNNNCTCC	2 cut(s)	431, 461
Bsc4I	CCNNNNNNNGG	7 cut(s)	119, 475, 769, 770, 1030, 1797, 1980
Bse118I	RCCGGY	2 cut(s)	119, 1790
Bse1I	ACTGG	5 cut(s)	745, 989, 1091, 1677, 1765
Bse3DI	GCAATG	2 cut(s)	505, 1658
Bse8I	GATNNNNATC	1 cut(s)	936
BseBI	CCWGG	1 cut(s)	714
BseDI	CCNNGG	8 cut(s)	424, 684, 943, 1134, 1223, 1490, 1711, 1974
BseGI	GGATG	6 cut(s)	60, 853, 1216, 1419, 1738, 1954
BseJI	GATNNNNATC	1 cut(s)	936
BseLI	CCNNNNNNNGG	7 cut(s)	119, 475, 769, 770, 1030, 1797, 1980
BseMI	GCAATG	2 cut(s)	505, 1658
BseMII	CTCAG	1 cut(s)	1857
BseNI	ACTGG	5 cut(s)	745, 989, 1091, 1677, 1765
BseRI	GAGGAG	3 cut(s)	179, 283, 439
BseSI	GKGCMC	1 cut(s)	1710
BseXI	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
BseYI	CCCAGC	1 cut(s)	1445
BsgI	GTGCAG	1 cut(s)	1335
Bsh1236I	CGCG	3 cut(s)	518, 1492, 1742
BshFI	GGCC	3 cut(s)	116, 793, 1532
BshTI	ACCGGT	1 cut(s)	1790
BsiHKAI	GWGCWC	1 cut(s)	1710
BsiHKCI	CYCGRG	1 cut(s)	728
BsiSI	CCGG	6 cut(s)	113, 120, 684, 764, 1533, 1791
BslFI	GGGAC	1 cut(s)	1249
BslI	CCNNNNNNNGG	7 cut(s)	119, 475, 769, 770, 1030, 1797, 1980
BsmAI	GTCTC	4 cut(s)	412, 644, 997, 1626
BsmFI	GGGAC	1 cut(s)	1249
BsmI	GAATGC	4 cut(s)	677, 1000, 1522, 1597
BsnI	GGCC	3 cut(s)	116, 793, 1532
Bso31I	GGTCTC	1 cut(s)	644
BsoBI	CYCGRG	1 cut(s)	728
Bsp119I	TTCGAA	1 cut(s)	2054
Bsp1286I	GDGCHC	1 cut(s)	1710
Bsp143I	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
Bsp19I	CCATGG	1 cut(s)	1223
Bsp68I	TCGCGA	1 cut(s)	1742
BspANI	GGCC	3 cut(s)	116, 793, 1532
BspCNI	CTCAG	1 cut(s)	1858
BspFNI	CGCG	3 cut(s)	518, 1492, 1742
BspHI	TCATGA	1 cut(s)	1455
BspLI	GGNNCC	1 cut(s)	2072
BspOI	GCTAGC	1 cut(s)	851
BspPI	GGATC	4 cut(s)	276, 1434, 2065, 2078
BspT104I	TTCGAA	1 cut(s)	2054
BspTNI	GGTCTC	1 cut(s)	644
BsrBI	CCGCTC	1 cut(s)	1055
BsrDI	GCAATG	2 cut(s)	505, 1658
BsrFI	RCCGGY	2 cut(s)	119, 1790
BsrI	ACTGG	5 cut(s)	745, 989, 1091, 1677, 1765
BssAI	RCCGGY	2 cut(s)	119, 1790
BssECI	CCNNGG	8 cut(s)	424, 684, 943, 1134, 1223, 1490, 1711, 1974
BssMI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
BssNI	GRCGYC	1 cut(s)	429
BssT1I	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
Bst2UI	CCWGG	1 cut(s)	714
Bst4CI	ACNGT	6 cut(s)	93, 151, 171, 602, 890, 901
Bst6I	CTCTTC	3 cut(s)	415, 1158, 1992
BstACI	GRCGYC	1 cut(s)	429
BstAPI	GCANNNNNTGC	1 cut(s)	1592
BstBI	TTCGAA	1 cut(s)	2054
BstC8I	GCNNGC	5 cut(s)	105, 849, 1149, 1665, 1888
BstDEI	CTNAG	1 cut(s)	1866
BstDSI	CCRYGG	2 cut(s)	1223, 1490
BstENI	CCTNNNNNAGG	2 cut(s)	473, 1028
BstF5I	GGATG	6 cut(s)	60, 853, 1216, 1419, 1738, 1954
BstFNI	CGCG	3 cut(s)	518, 1492, 1742
BstHHI	GCGC	1 cut(s)	520
BstKTI	GATC	9 cut(s)	284, 666, 727, 940, 1345, 1429, 1510, 1758, 2073
BstMAI	GTCTC	4 cut(s)	412, 644, 997, 1626
BstMBI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
BstMWI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1592
BstNI	CCWGG	1 cut(s)	714
BstNSI	RCATGY	3 cut(s)	33, 498, 1706
BstPAI	GACNNNNGTC	1 cut(s)	600
BstSCI	CCNGG	3 cut(s)	683, 712, 762
BstSFI	CTRYAG	1 cut(s)	1627
BstSLI	GKGCMC	1 cut(s)	1710
BstUI	CGCG	3 cut(s)	518, 1492, 1742
BstV1I	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
BstV2I	GAAGAC	1 cut(s)	1729
BstX2I	RGATCY	3 cut(s)	281, 724, 2070
BstXI	CCANNNNNNTGG	1 cut(s)	996
BstYI	RGATCY	3 cut(s)	281, 724, 2070
BsuI	GTATCC	1 cut(s)	1780
BsuRI	GGCC	3 cut(s)	116, 793, 1532
BtgI	CCRYGG	2 cut(s)	1223, 1490
BtrI	CACGTC	1 cut(s)	1402
BtsCI	GGATG	6 cut(s)	60, 853, 1216, 1419, 1738, 1954
BtsI	GCAGTG	2 cut(s)	786, 1593
BtuMI	TCGCGA	1 cut(s)	1742
Cac8I	GCNNGC	5 cut(s)	105, 849, 1149, 1665, 1888
CaiI	CAGNNNCTG	1 cut(s)	1846
CciI	TCATGA	1 cut(s)	1455
CfoI	GCGC	1 cut(s)	520
Cfr10I	RCCGGY	2 cut(s)	119, 1790
Cfr13I	GGNCC	3 cut(s)	791, 1021, 1530
Cfr42I	CCGCGG	1 cut(s)	1493
CseI	GACGC	2 cut(s)	418, 683
Csp6I	GTAC	7 cut(s)	86, 233, 580, 619, 919, 1028, 1575
CspAI	ACCGGT	1 cut(s)	1790
CspCI	CAANNNNNGTGG	4 cut(s)	886, 921, 1679, 1714
CviAII	CATG	7 cut(s)	30, 401, 495, 1224, 1456, 1703, 1953
CviQI	GTAC	7 cut(s)	86, 233, 580, 619, 919, 1028, 1575
DdeI	CTNAG	1 cut(s)	1866
DpnI	GATC	9 cut(s)	283, 665, 726, 939, 1344, 1428, 1509, 1757, 2072
DpnII	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
DrdI	GACNNNNNNGTC	1 cut(s)	428
DseDI	GACNNNNNNGTC	1 cut(s)	428
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	3 cut(s)	415, 1158, 1992
EarI	CTCTTC	3 cut(s)	415, 1158, 1992
EciI	GGCGGA	1 cut(s)	364
Eco130I	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
Eco31I	GGTCTC	1 cut(s)	644
Eco47I	GGWCC	1 cut(s)	1021
Eco57I	CTGAAG	2 cut(s)	400, 1791
Eco88I	CYCGRG	1 cut(s)	728
EcoNI	CCTNNNNNAGG	2 cut(s)	473, 1028
EcoO109I	RGGNCCY	2 cut(s)	791, 1021
EcoRI	GAATTC	1 cut(s)	1836
EcoRII	CCWGG	1 cut(s)	712
EcoT14I	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
EcoT22I	ATGCAT	1 cut(s)	1954
ErhI	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
FaeI	CATG	7 cut(s)	33, 404, 498, 1227, 1459, 1706, 1956
FalI	AAGNNNNNCTT	4 cut(s)	1041, 1073, 1135, 1167
FaqI	GGGAC	1 cut(s)	1249
FatI	CATG	7 cut(s)	29, 400, 494, 1223, 1455, 1702, 1952
FauI	CCCGC	1 cut(s)	1497
FauNDI	CATATG	1 cut(s)	1111
FbaI	TGATCA	2 cut(s)	663, 1342
Fnu4HI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
FokI	GGATG	6 cut(s)	47, 840, 1223, 1426, 1745, 1961
Fsp4HI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
FspBI	CTAG	7 cut(s)	437, 537, 740, 848, 944, 1025, 2086
GlaI	GCGC	1 cut(s)	519
GluI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
GsaI	CCCAGC	1 cut(s)	1449
GsuI	CTGGAG	1 cut(s)	1694
HaeIII	GGCC	3 cut(s)	116, 793, 1532
HapII	CCGG	6 cut(s)	113, 120, 684, 764, 1533, 1791
HgaI	GACGC	2 cut(s)	418, 683
HhaI	GCGC	1 cut(s)	520
Hin1I	GRCGYC	1 cut(s)	429
Hin1II	CATG	7 cut(s)	33, 404, 498, 1227, 1459, 1706, 1956
Hin6I	GCGC	1 cut(s)	518
HinP1I	GCGC	1 cut(s)	518
HincII	GTYRAC	1 cut(s)	1542
HindII	GTYRAC	1 cut(s)	1542
HindIII	AAGCTT	2 cut(s)	1394, 1431
HinfI	GANTC	7 cut(s)	143, 316, 1478, 1678, 1744, 1814, 2056
HpaI	GTTAAC	1 cut(s)	1542
HpaII	CCGG	6 cut(s)	113, 120, 684, 764, 1533, 1791
Hpy166II	GTNNAC	7 cut(s)	147, 582, 619, 786, 1280, 1542, 1708
Hpy188I	TCNGA	8 cut(s)	97, 135, 281, 606, 633, 673, 1749, 1929
Hpy188III	TCNNGA	9 cut(s)	437, 722, 728, 740, 884, 905, 1456, 1568, 1741
Hpy8I	GTNNAC	7 cut(s)	147, 582, 619, 786, 1280, 1542, 1708
Hpy99I	CGWCG	1 cut(s)	677
HpyAV	CCTTC	6 cut(s)	174, 424, 818, 1201, 1259, 1973
HpyCH4III	ACNGT	6 cut(s)	93, 151, 171, 602, 890, 901
HpyCH4IV	ACGT	2 cut(s)	1068, 1401
HpyF10VI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1592
HpyF3I	CTNAG	1 cut(s)	1866
HpySE526I	ACGT	2 cut(s)	1068, 1401
Hsp92I	GRCGYC	1 cut(s)	429
Hsp92II	CATG	7 cut(s)	33, 404, 498, 1227, 1459, 1706, 1956
HspAI	GCGC	1 cut(s)	518
Ksp22I	TGATCA	2 cut(s)	663, 1342
KspAI	GTTAAC	1 cut(s)	1542
KspI	CCGCGG	1 cut(s)	1493
Kzo9I	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
LmnI	GCTCC	1 cut(s)	1298
Lsp1109I	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
LweI	GCATC	3 cut(s)	1201, 1664, 1939
MaeI	CTAG	7 cut(s)	437, 537, 740, 848, 944, 1025, 2086
MaeII	ACGT	2 cut(s)	1068, 1401
MaeIII	GTNAC	6 cut(s)	419, 430, 1064, 1285, 1484, 1942
MalI	GATC	9 cut(s)	283, 665, 726, 939, 1344, 1428, 1509, 1757, 2072
MbiI	CCGCTC	1 cut(s)	1055
MboI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
MboII	GAAGA	7 cut(s)	211, 402, 457, 747, 1175, 1729, 2009
MfeI	CAATTG	1 cut(s)	1215
MflI	RGATCY	3 cut(s)	281, 724, 2070
MhlI	GDGCHC	1 cut(s)	1710
MluCI	AATT	7 cut(s)	1080, 1124, 1215, 1516, 1547, 1764, 1836
MlyI	GAGTC	4 cut(s)	152, 310, 1753, 1823
MmeI	TCCRAC	2 cut(s)	312, 696
Mph1103I	ATGCAT	1 cut(s)	1954
MroXI	GAANNNNTTC	1 cut(s)	1253
MseI	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
MspA1I	CMGCKG	1 cut(s)	1492
MspI	CCGG	6 cut(s)	113, 120, 684, 764, 1533, 1791
MspR9I	CCNGG	3 cut(s)	685, 714, 764
MunI	CAATTG	1 cut(s)	1215
Mva1269I	GAATGC	4 cut(s)	677, 1000, 1522, 1597
MvaI	CCWGG	1 cut(s)	714
MvnI	CGCG	3 cut(s)	518, 1492, 1742
MwoI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1592
NciI	CCSGG	2 cut(s)	685, 764
NcoI	CCATGG	1 cut(s)	1223
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
NheI	GCTAGC	1 cut(s)	847
NlaIII	CATG	7 cut(s)	33, 404, 498, 1227, 1459, 1706, 1956
NlaIV	GGNNCC	1 cut(s)	2072
NmeAIII	GCCGAG	3 cut(s)	166, 405, 1583
NmuCI	GTSAC	3 cut(s)	419, 430, 1064
NruI	TCGCGA	1 cut(s)	1742
NsiI	ATGCAT	1 cut(s)	1954
NspI	RCATGY	3 cut(s)	33, 498, 1706
NspV	TTCGAA	1 cut(s)	2054
PaeR7I	CTCGAG	1 cut(s)	728
PagI	TCATGA	1 cut(s)	1455
PcsI	WCGNNNNNNNCGW	1 cut(s)	629
PctI	GAATGC	4 cut(s)	677, 1000, 1522, 1597
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	3 cut(s)	1478, 1678, 2056
PinAI	ACCGGT	1 cut(s)	1790
PkrI	GCNGC	8 cut(s)	711, 1054, 1141, 1473, 1609, 1669, 1687, 1848
PleI	GAGTC	4 cut(s)	151, 310, 1752, 1822
PpsI	GAGTC	4 cut(s)	151, 310, 1752, 1822
PpuMI	RGGWCCY	1 cut(s)	1021
PshAI	GACNNNNGTC	1 cut(s)	600
Psp5II	RGGWCCY	1 cut(s)	1021
Psp6I	CCWGG	1 cut(s)	712
PspFI	CCCAGC	1 cut(s)	1445
PspGI	CCWGG	1 cut(s)	712
PspN4I	GGNNCC	1 cut(s)	2072
PspPI	GGNCC	3 cut(s)	791, 1021, 1530
PspPPI	RGGWCCY	1 cut(s)	1021
PstNI	CAGNNNCTG	1 cut(s)	1846
PsuI	RGATCY	3 cut(s)	281, 724, 2070
RruI	TCGCGA	1 cut(s)	1742
RsaI	GTAC	7 cut(s)	87, 234, 581, 620, 920, 1029, 1576
RsaNI	GTAC	7 cut(s)	86, 233, 580, 619, 919, 1028, 1575
SacII	CCGCGG	1 cut(s)	1493
SaqAI	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
SatI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
Sau3AI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
Sau96I	GGNCC	3 cut(s)	791, 1021, 1530
ScaI	AGTACT	1 cut(s)	87
SchI	GAGTC	4 cut(s)	152, 310, 1753, 1823
ScrFI	CCNGG	3 cut(s)	685, 714, 764
SduI	GDGCHC	1 cut(s)	1710
SfaNI	GCATC	3 cut(s)	1201, 1664, 1939
SfcI	CTRYAG	1 cut(s)	1627
Sfr274I	CTCGAG	1 cut(s)	728
Sfr303I	CCGCGG	1 cut(s)	1493
SfuI	TTCGAA	1 cut(s)	2054
SgrBI	CCGCGG	1 cut(s)	1493
SinI	GGWCC	1 cut(s)	1021
SlaI	CTCGAG	1 cut(s)	728
SmlI	CTYRAG	3 cut(s)	720, 728, 914
SmoI	CTYRAG	3 cut(s)	720, 728, 914
Sse9I	AATT	7 cut(s)	1080, 1124, 1215, 1516, 1547, 1764, 1836
SspI	AATATT	1 cut(s)	260
SspMI	CTAG	7 cut(s)	437, 537, 740, 848, 944, 1025, 2086
StyD4I	CCNGG	3 cut(s)	683, 712, 762
StyI	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
TaaI	ACNGT	6 cut(s)	93, 151, 171, 602, 890, 901
TaiI	ACGT	2 cut(s)	1071, 1404
TaqI	TCGA	7 cut(s)	594, 729, 1004, 1085, 1506, 1817, 2054
TasI	AATT	7 cut(s)	1080, 1124, 1215, 1516, 1547, 1764, 1836
TatI	WGTACW	7 cut(s)	85, 232, 579, 618, 918, 1027, 1574
TauI	GCSGC	3 cut(s)	712, 1055, 1142
TfiI	GAWTC	3 cut(s)	1478, 1678, 2056
Tru1I	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
Tru9I	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
TseFI	GTSAC	3 cut(s)	419, 430, 1064
TseI	GCWGC	5 cut(s)	1471, 1607, 1667, 1685, 1846
Tsp45I	GTSAC	3 cut(s)	419, 430, 1064
TspDTI	ATGAA	8 cut(s)	49, 1098, 1128, 1220, 1278, 1430, 1444, 1472
TspGWI	ACGGA	1 cut(s)	1961
VneI	GTGCAC	1 cut(s)	1706
VpaK11BI	GGWCC	1 cut(s)	1021
XagI	CCTNNNNNAGG	2 cut(s)	473, 1028
XapI	RAATTY	2 cut(s)	1547, 1836
XbaI	TCTAGA	2 cut(s)	436, 739
XceI	RCATGY	3 cut(s)	33, 498, 1706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1355
XhoI	CTCGAG	1 cut(s)	728
XmaJI	CCTAGG	1 cut(s)	943
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	7 cut(s)	437, 537, 740, 848, 944, 1025, 2086
ZrmI	AGTACT	1 cut(s)	87
Zsp2I	ATGCAT	1 cut(s)	1954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.