Rroxscaffold_2G00087160

Endo-1,3(4)-beta-glucanase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
9254625 .. 9256829
2205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00087160.1

Sequence Viewer

Length: 2205 bp
ATGTTGAAAAAGATCGGGAGAAGAGTCAAAACCTTAATCACCAAGAGTTTCAAGAAACCCAAATCCAAACCCTATAAACCTCCACCTCCACCTTCCCCATCTCCATCACCACCATCTGAACCAGAAATTGAAGTACCCACAACCATGTCACCACCACATTCACATCACACACACAAGCAAACCCCTTTCCTTTTCCCCCAAACCCAATCCACAGTCCTCCCTGACCCTTCTCCTTTCTTCTCCCAAAACCTCCTCAAAACCCCACTCCCCACAAACTCTTTCTTCCAAAACTTGACCCTTAAAAATGGAGATCAACCCGAATACTTCCACCCCTACCTCATCAAATCCGCCTCCTCCTCTCTTTCTCTCTGTTACCCATCTCGATTCTCCAACTCTGCTTTCTTGTACCAAGTCTTCAACGCCGACCTCACCATCTCAAACAGCCAAAACCCACAAGAAAGACATGTAATTTCTTCTTTCAATGATCTCAGCATCACTCTGGAGTTTCCCTCCTCCAATCTCAGATTCTTTCTCGTCCGGGGAAGCCCATTTCTCACCTGCTCTGTTTCGAACCGGACTTCCATTTCAATTTCAACGATCCACGCTATTCTATCATTCTCTTCAAATGAGTCTCGCACCAAGTACACGATCAAGCTCAACAACAATCAGACATGGCTTGTATACACCTCTTCTTCAATTGATCTTACCAATACCAGCTTATCTTTGATCACTTCAACTGGGTTTTCCGGCATTGTGAGGATTGCACTACTGATGGAATCTGACCCACAATTCGAGTCGGTTCTTGATCGGTTCAGCTCTAGCTACCCGGTTTCCGGTGAGGCTGTGTTCACAAAGCCGTTTGCTTTGGAGTATAAATGGGAGAAGAAAGGGTGGGGAGACTTGCTTATGCTGGCTCATCCTCTACATTTAAAGCTTATTGATGGTGACGATTGTGGTGTTACTGTTTTGGAGGATTTCAAGTACAAAAGCATTGATGGTGATCTTGTTGGTGTTGTGGGGGATTCATGGGTGTTGAAGCCTGACCCTGTTTCGGTTACTTGGCATTCGACTAAAGGTATCAAACAAGACTCATATTCTGAGATAATATCTGCACTTACTAAAGATGTTGAGGCTTTAAGTTCTACACCAATTGCAACTACTTCTTCGTATTTTTATGGGAAGTTGATTGCTAGAGCTGCTAGGTTGGCTTTGATTGCTGAGGAGGTGGGTTATCTTGATGTGATTCCAGCGATTAAGAAGTATTTGAGTGATACAATTGAGCCTTGGTTGGATGGGACTTTTAGTGGGAATGGTTTCTTGCATGATAATAAATGGGGTGGCATTGTGACTAAACAAGGATCAGCGGATTCGGGAGCAGATTTCGGGTTTGGGATTTACAATGATCACCATTACCATTTAGGGTACTTTATTTATGCCATTTCCGTGCTTGCTAAGATTGATCCAGCCTGGGGGAGGAAGTATAGGGCTCAAGCTTATTCACTTGCCGCGGATTTTATGAACTTAGGCAGGAGGGCAAACTCGAATTATCCACGTTTGAGATGCTTTGATTTGTATAAGTTGCATTCATGGGCAGGAGGGCTGACTGAATTTGGAGATGGTAGGAATCAAGAGAGCACAAGTGAGGCTGTGAATGCTTACTACTCAGCTGCATTGTTGGGGCTAGCCTATGGAGACACCCATCTTGTGGCCACTGGGTCAATGCTTGCGGCATTGGAAATTAAAGCAGCTCAAATGTGGTGGCAAGTAAAAGAGGGTGATAATATTTATGAGCCAGATTTCACAAGGGAAAATAGGGTAGTTGGAGTGCTGTGGGCTAATAAGAGGGACAGTGGACTGTGGTTTGCTCCTCGGGAGTGGAAAGAGTGCCGGCTTGGAATCCAACTGCTTCCCATTTTACCTATCTCTGAGGTATTGTTCTCTGATGTTGCCTTTGTTAGGCAACTCGTGGAGTGGACAGAACCAGCTCTGAGTAGAGAGGGTGTTGGGGAAGGATGGAAAGGGTTTGTGTATACTTTGCAAGGGATTTACGATAAACAAGGCGCTTTGGGGAAGATTAGGAACTTGAAGGGTTATGATGATGGGAACTCGCTCACTAATCTGTTATGGTGGATCCATAGCAGAGGTGCGGAAGGAGATGGTTGTGGAATTGGAGAGAACATATGTTGGTTTAAGCACTATCACTGA

Protein Analysis

734

Amino Acids

82.0

Weight (kDa)

7.03

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_81 PF03639 83 - 353 7.8e-63 Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C PF17652 360 - 711 4.5e-108 Glycosyl hydrolase family 81 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000403)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18310 AT5G15870
fragaria_vesca FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 566
Acc36I ACCTGC 1 cut(s) 566
AccB7I CCANNNNNTGG 1 cut(s) 1705
AccI GTMKAC 2 cut(s) 681, 2030
AccII CGCG 1 cut(s) 1508
AciI CCGC 6 cut(s) 348, 1364, 1506, 1508, 1727, 2147
AclWI GGATC 5 cut(s) 592, 1366, 1454, 2125, 2138
AcoI YGGCCR 1 cut(s) 1707
AcsI RAATTY 1 cut(s) 1607
AfaI GTAC 5 cut(s) 135, 407, 644, 983, 1424
AfiI CCNNNNNNNGG 6 cut(s) 833, 1051, 1469, 1473, 1705, 1956
AflIII ACRYGT 1 cut(s) 463
AjnI CCWGG 1 cut(s) 1466
AjuI GAANNNNNNNTTGG 4 cut(s) 383, 415, 509, 541
AloI GAACNNNNNNTCC 2 cut(s) 563, 595
Alw21I GWGCWC 1 cut(s) 1637
Alw26I GTCTC 3 cut(s) 636, 891, 1686
AlwI GGATC 5 cut(s) 592, 1366, 1454, 2125, 2138
Ama87I CYCGRG 1 cut(s) 1869
AoxI GGCC 1 cut(s) 1707
ApeKI GCWGC 3 cut(s) 1196, 1667, 1745
ApoI RAATTY 1 cut(s) 1607
ArsI GACNNNNNNTTYG 2 cut(s) 773, 805
Asp700I GAANNNNTTC 1 cut(s) 1313
AspLEI GCGC 1 cut(s) 2063
AsuC2I CCSGG 2 cut(s) 539, 827
AsuII TTCGAA 1 cut(s) 569
AsuNHI GCTAGC 1 cut(s) 1681
AvaI CYCGRG 1 cut(s) 1869
BalI TGGCCA 1 cut(s) 1709
BamHI GGATCC 1 cut(s) 2130
BanII GRGCYC 1 cut(s) 1489
BarI GAAGNNNNNNTAC 2 cut(s) 398, 430
BauI CACGAG 1 cut(s) 1964
BbsI GAAGAC 1 cut(s) 406
Bbv12I GWGCWC 1 cut(s) 1637
BbvCI CCTCAGC 1 cut(s) 1218
BbvI GCAGC 3 cut(s) 1183, 1654, 1757
BceAI ACGGC 1 cut(s) 841
BciT130I CCWGG 1 cut(s) 1468
BclI TGATCA 2 cut(s) 726, 1402
BcnI CCSGG 2 cut(s) 539, 827
BcoDI GTCTC 3 cut(s) 636, 891, 1686
BfaI CTAG 4 cut(s) 819, 1191, 1200, 1682
BfoI RGCGCY 1 cut(s) 2064
BfuAI ACCTGC 1 cut(s) 566
BisI GCNGC 5 cut(s) 1197, 1506, 1668, 1728, 1746
BlsI GCNGC 5 cut(s) 1198, 1507, 1669, 1729, 1747
Bme1390I CCNGG 3 cut(s) 539, 827, 1468
BmeT110I CYCGRG 1 cut(s) 1869
BmiI GGNNCC 1 cut(s) 2132
BmrFI CCNGG 3 cut(s) 539, 827, 1468
BmrI ACTGGG 2 cut(s) 747, 1722
BmsI GCATC 2 cut(s) 501, 1550
BmtI GCTAGC 1 cut(s) 1685
BmuI ACTGGG 2 cut(s) 747, 1722
BpiI GAAGAC 1 cut(s) 406
BplI GAGNNNNNCTC 2 cut(s) 494, 526
BpmI CTGGAG 1 cut(s) 521
Bpu10I CCTNAGC 1 cut(s) 1218
Bpu14I TTCGAA 1 cut(s) 569
BpuEI CTTGAG 1 cut(s) 1473
BpuMI CCSGG 2 cut(s) 539, 827
BsaBI GATNNNNATC 1 cut(s) 999
BsaJI CCNNGG 5 cut(s) 538, 1283, 1467, 1506, 1868
BsaWI WCCGGW 2 cut(s) 573, 833
Bsc4I CCNNNNNNNGG 6 cut(s) 833, 1051, 1469, 1473, 1705, 1956
Bse118I RCCGGY 1 cut(s) 1887
Bse1I ACTGG 2 cut(s) 742, 1717
Bse8I GATNNNNATC 1 cut(s) 999
BseBI CCWGG 1 cut(s) 1468
BseDI CCNNGG 5 cut(s) 538, 1283, 1467, 1506, 1868
BseGI GGATG 3 cut(s) 916, 1297, 2018
BseJI GATNNNNATC 1 cut(s) 999
BseLI CCNNNNNNNGG 6 cut(s) 833, 1051, 1469, 1473, 1705, 1956
BseMII CTCAG 7 cut(s) 502, 535, 1089, 1209, 1677, 1917, 1979
BseNI ACTGG 2 cut(s) 742, 1717
BseRI GAGGAG 6 cut(s) 242, 343, 346, 502, 1235, 1857
BseXI GCAGC 3 cut(s) 1183, 1654, 1757
BsgI GTGCAG 1 cut(s) 1095
Bsh1236I CGCG 1 cut(s) 1508
BshFI GGCC 1 cut(s) 1709
BsiHKAI GWGCWC 1 cut(s) 1637
BsiHKCI CYCGRG 1 cut(s) 1869
BsiSI CCGG 6 cut(s) 538, 574, 747, 827, 834, 1888
BslFI GGGAC 2 cut(s) 1309, 1859
BslI CCNNNNNNNGG 6 cut(s) 833, 1051, 1469, 1473, 1705, 1956
BsmAI GTCTC 3 cut(s) 636, 891, 1686
BsmFI GGGAC 2 cut(s) 1309, 1859
BsmI GAATGC 3 cut(s) 1063, 1582, 1657
BsnI GGCC 1 cut(s) 1709
BsoBI CYCGRG 1 cut(s) 1869
Bsp119I TTCGAA 1 cut(s) 569
Bsp1286I GDGCHC 2 cut(s) 1489, 1637
BspACI CCGC 6 cut(s) 348, 1364, 1506, 1508, 1727, 2147
BspANI GGCC 1 cut(s) 1709
BspCNI CTCAG 7 cut(s) 501, 534, 1090, 1210, 1676, 1918, 1980
BspFNI CGCG 1 cut(s) 1508
BspLI GGNNCC 1 cut(s) 2132
BspMI ACCTGC 1 cut(s) 566
BspOI GCTAGC 1 cut(s) 1685
BspPI GGATC 5 cut(s) 592, 1366, 1454, 2125, 2138
BspT104I TTCGAA 1 cut(s) 569
BsrFI RCCGGY 1 cut(s) 1887
BsrI ACTGG 2 cut(s) 742, 1717
BssAI RCCGGY 1 cut(s) 1887
BssECI CCNNGG 5 cut(s) 538, 1283, 1467, 1506, 1868
BssNAI GTATAC 2 cut(s) 682, 2031
BssSI CACGAG 1 cut(s) 1964
BssT1I CCWWGG 1 cut(s) 1283
Bst1107I GTATAC 2 cut(s) 682, 2031
Bst2BI CACGAG 1 cut(s) 1964
Bst2UI CCWGG 1 cut(s) 1468
Bst4CI ACNGT 4 cut(s) 214, 964, 1850, 1857
Bst6I CTCTTC 3 cut(s) 16, 625, 694
BstBI TTCGAA 1 cut(s) 569
BstC8I GCNNGC 5 cut(s) 912, 1449, 1683, 1725, 1889
BstDEI CTNAG 9 cut(s) 488, 521, 1098, 1218, 1452, 1522, 1663, 1926, 1988
BstDSI CCRYGG 1 cut(s) 1506
BstENI CCTNNNNNAGG 2 cut(s) 1471, 1954
BstF5I GGATG 3 cut(s) 916, 1297, 2018
BstFNI CGCG 1 cut(s) 1508
BstH2I RGCGCY 1 cut(s) 2064
BstHHI GCGC 1 cut(s) 2063
BstMAI GTCTC 3 cut(s) 636, 891, 1686
BstMWI GCNNNNNNNGC 4 cut(s) 1196, 1205, 1214, 1652
BstNI CCWGG 1 cut(s) 1468
BstNSI RCATGY 1 cut(s) 467
BstSCI CCNGG 3 cut(s) 537, 825, 1466
BstUI CGCG 1 cut(s) 1508
BstV1I GCAGC 3 cut(s) 1183, 1654, 1757
BstV2I GAAGAC 1 cut(s) 406
BstX2I RGATCY 1 cut(s) 2130
BstYI RGATCY 1 cut(s) 2130
BstZ17I GTATAC 2 cut(s) 682, 2031
BsuRI GGCC 1 cut(s) 1709
BtgI CCRYGG 1 cut(s) 1506
BtsCI GGATG 3 cut(s) 916, 1297, 2018
BtsIMutI CAGTG 3 cut(s) 1710, 1855, 2200
BveI ACCTGC 1 cut(s) 566
Cac8I GCNNGC 5 cut(s) 912, 1449, 1683, 1725, 1889
CfoI GCGC 1 cut(s) 2063
Cfr10I RCCGGY 1 cut(s) 1887
Cfr42I CCGCGG 1 cut(s) 1509
Csp6I GTAC 5 cut(s) 134, 406, 643, 982, 1423
CspCI CAANNNNNGTGG 2 cut(s) 1739, 1774
CviAII CATG 6 cut(s) 145, 464, 672, 1026, 1322, 1587
CviQI GTAC 5 cut(s) 134, 406, 643, 982, 1423
DdeI CTNAG 9 cut(s) 488, 521, 1098, 1218, 1452, 1522, 1663, 1926, 1988
DraI TTTAAA 1 cut(s) 930
EaeI YGGCCR 1 cut(s) 1707
Eam1104I CTCTTC 3 cut(s) 16, 625, 694
EarI CTCTTC 3 cut(s) 16, 625, 694
EciI GGCGGA 1 cut(s) 337
Eco130I CCWWGG 1 cut(s) 1283
Eco24I GRGCYC 1 cut(s) 1489
Eco88I CYCGRG 1 cut(s) 1869
EcoNI CCTNNNNNAGG 2 cut(s) 1471, 1954
EcoRII CCWGG 1 cut(s) 1466
EcoT14I CCWWGG 1 cut(s) 1283
EcoT38I GRGCYC 1 cut(s) 1489
ErhI CCWWGG 1 cut(s) 1283
FaeI CATG 6 cut(s) 148, 467, 675, 1029, 1325, 1590
FaqI GGGAC 2 cut(s) 1309, 1859
FatI CATG 6 cut(s) 144, 463, 671, 1025, 1321, 1586
FauNDI CATATG 1 cut(s) 2180
FbaI TGATCA 2 cut(s) 726, 1402
FblI GTMKAC 2 cut(s) 681, 2030
Fnu4HI GCNGC 5 cut(s) 1197, 1506, 1668, 1728, 1746
FokI GGATG 3 cut(s) 903, 1304, 2025
FriOI GRGCYC 1 cut(s) 1489
Fsp4HI GCNGC 5 cut(s) 1197, 1506, 1668, 1728, 1746
FspBI CTAG 4 cut(s) 819, 1191, 1200, 1682
GlaI GCGC 1 cut(s) 2062
GluI GCNGC 5 cut(s) 1197, 1506, 1668, 1728, 1746
GsuI CTGGAG 1 cut(s) 521
HaeII RGCGCY 1 cut(s) 2064
HaeIII GGCC 1 cut(s) 1709
HapII CCGG 6 cut(s) 538, 574, 747, 827, 834, 1888
HhaI GCGC 1 cut(s) 2063
Hin1II CATG 6 cut(s) 148, 467, 675, 1029, 1325, 1590
Hin6I GCGC 1 cut(s) 2061
HinP1I GCGC 1 cut(s) 2061
HindIII AAGCTT 2 cut(s) 932, 1491
HpaII CCGG 6 cut(s) 538, 574, 747, 827, 834, 1888
Hpy166II GTNNAC 6 cut(s) 645, 682, 849, 1853, 1974, 2031
Hpy188I TCNGA 8 cut(s) 118, 524, 669, 781, 1099, 1927, 1942, 1989
Hpy188III TCNNGA 9 cut(s) 16, 52, 381, 500, 803, 1235, 1371, 1628, 1871
Hpy8I GTNNAC 6 cut(s) 645, 682, 849, 1853, 1974, 2031
HpyAV CCTTC 5 cut(s) 102, 237, 2003, 2080, 2144
HpyCH4III ACNGT 4 cut(s) 214, 964, 1850, 1857
HpyCH4IV ACGT 1 cut(s) 1552
HpyCH4V TGCA 7 cut(s) 764, 1112, 1154, 1321, 1582, 1670, 2038
HpyF10VI GCNNNNNNNGC 4 cut(s) 1196, 1205, 1214, 1652
HpyF3I CTNAG 9 cut(s) 488, 521, 1098, 1218, 1452, 1522, 1663, 1926, 1988
HpySE526I ACGT 1 cut(s) 1552
Hsp92II CATG 6 cut(s) 148, 467, 675, 1029, 1325, 1590
HspAI GCGC 1 cut(s) 2061
KroI GCCGGC 1 cut(s) 1887
KroNI GCCGGC 1 cut(s) 1889
Ksp22I TGATCA 2 cut(s) 726, 1402
KspI CCGCGG 1 cut(s) 1509
LmnI GCTCC 2 cut(s) 1373, 1870
Lsp1109I GCAGC 3 cut(s) 1183, 1654, 1757
LweI GCATC 2 cut(s) 501, 1550
MaeI CTAG 4 cut(s) 819, 1191, 1200, 1682
MaeII ACGT 1 cut(s) 1552
MaeIII GTNAC 6 cut(s) 147, 371, 944, 958, 1054, 1345
MfeI CAATTG 3 cut(s) 696, 1149, 1275
MflI RGATCY 1 cut(s) 2130
MhlI GDGCHC 2 cut(s) 1489, 1637
MlsI TGGCCA 1 cut(s) 1709
MluNI TGGCCA 1 cut(s) 1709
MlyI GAGTC 4 cut(s) 33, 638, 803, 1082
MmeI TCCRAC 4 cut(s) 414, 1269, 1801, 1924
Mox20I TGGCCA 1 cut(s) 1709
MroNI GCCGGC 1 cut(s) 1887
MroXI GAANNNNTTC 1 cut(s) 1313
MscI TGGCCA 1 cut(s) 1709
MseI TTAA 7 cut(s) 35, 300, 929, 1136, 1254, 1740, 2190
MslI CAYNNNNRTG 2 cut(s) 143, 1442
Msp20I TGGCCA 1 cut(s) 1709
MspA1I CMGCKG 3 cut(s) 1364, 1508, 1667
MspI CCGG 6 cut(s) 538, 574, 747, 827, 834, 1888
MspR9I CCNGG 3 cut(s) 539, 827, 1468
MunI CAATTG 3 cut(s) 696, 1149, 1275
Mva1269I GAATGC 3 cut(s) 1063, 1582, 1657
MvaI CCWGG 1 cut(s) 1468
MvnI CGCG 1 cut(s) 1508
MwoI GCNNNNNNNGC 4 cut(s) 1196, 1205, 1214, 1652
NaeI GCCGGC 1 cut(s) 1889
NciI CCSGG 2 cut(s) 539, 827
NdeI CATATG 1 cut(s) 2180
NgoMIV GCCGGC 1 cut(s) 1887
NheI GCTAGC 1 cut(s) 1681
NlaIII CATG 6 cut(s) 148, 467, 675, 1029, 1325, 1590
NlaIV GGNNCC 1 cut(s) 2132
NmuCI GTSAC 3 cut(s) 147, 944, 1345
NspI RCATGY 1 cut(s) 467
NspV TTCGAA 1 cut(s) 569
PaqCI CACCTGC 1 cut(s) 566
PciI ACATGT 1 cut(s) 463
PctI GAATGC 3 cut(s) 1063, 1582, 1657
PdiI GCCGGC 1 cut(s) 1889
PdmI GAANNNNTTC 1 cut(s) 1313
PfeI GAWTC 8 cut(s) 384, 525, 776, 1022, 1243, 1367, 1624, 1896
PflMI CCANNNNNTGG 1 cut(s) 1705
PkrI GCNGC 5 cut(s) 1198, 1507, 1669, 1729, 1747
PleI GAGTC 4 cut(s) 32, 637, 802, 1082
PpsI GAGTC 4 cut(s) 32, 637, 802, 1082
PscI ACATGT 1 cut(s) 463
Psp6I CCWGG 1 cut(s) 1466
PspGI CCWGG 1 cut(s) 1466
PspN4I GGNNCC 1 cut(s) 2132
PsuI RGATCY 1 cut(s) 2130
PvuII CAGCTG 1 cut(s) 1667
RsaI GTAC 5 cut(s) 135, 407, 644, 983, 1424
RsaNI GTAC 5 cut(s) 134, 406, 643, 982, 1423
RseI CAYNNNNRTG 2 cut(s) 143, 1442
SacII CCGCGG 1 cut(s) 1509
SaqAI TTAA 7 cut(s) 35, 300, 929, 1136, 1254, 1740, 2190
SatI GCNGC 5 cut(s) 1197, 1506, 1668, 1728, 1746
SchI GAGTC 4 cut(s) 33, 638, 803, 1082
ScrFI CCNGG 3 cut(s) 539, 827, 1468
SduI GDGCHC 2 cut(s) 1489, 1637
SfaNI GCATC 2 cut(s) 501, 1550
Sfr303I CCGCGG 1 cut(s) 1509
SfuI TTCGAA 1 cut(s) 569
SgrBI CCGCGG 1 cut(s) 1509
SmiMI CAYNNNNRTG 2 cut(s) 143, 1442
SmlI CTYRAG 1 cut(s) 1488
SmoI CTYRAG 1 cut(s) 1488
SsiI CCGC 6 cut(s) 348, 1364, 1506, 1508, 1727, 2147
SspI AATATT 1 cut(s) 1783
SspMI CTAG 4 cut(s) 819, 1191, 1200, 1682
StyD4I CCNGG 3 cut(s) 537, 825, 1466
StyI CCWWGG 1 cut(s) 1283
TaaI ACNGT 4 cut(s) 214, 964, 1850, 1857
TaiI ACGT 1 cut(s) 1555
TaqI TCGA 5 cut(s) 382, 569, 792, 1067, 1541
TatI WGTACW 2 cut(s) 642, 981
TauI GCSGC 2 cut(s) 1508, 1730
TfiI GAWTC 8 cut(s) 384, 525, 776, 1022, 1243, 1367, 1624, 1896
Tru1I TTAA 7 cut(s) 35, 300, 929, 1136, 1254, 1740, 2190
Tru9I TTAA 7 cut(s) 35, 300, 929, 1136, 1254, 1740, 2190
TscAI CASTG 2 cut(s) 1717, 1855
TseFI GTSAC 3 cut(s) 147, 944, 1345
TseI GCWGC 3 cut(s) 1196, 1667, 1745
Tsp45I GTSAC 3 cut(s) 147, 944, 1345
TspDTI ATGAA 3 cut(s) 1014, 1532, 1575
TspGWI ACGGA 1 cut(s) 1432
TspRI CASTG 2 cut(s) 1717, 1855
Van91I CCANNNNNTGG 1 cut(s) 1705
XagI CCTNNNNNAGG 2 cut(s) 1471, 1954
XapI RAATTY 1 cut(s) 1607
XceI RCATGY 1 cut(s) 467
XmiI GTMKAC 2 cut(s) 681, 2030
XmnI GAANNNNTTC 1 cut(s) 1313
XspI CTAG 4 cut(s) 819, 1191, 1200, 1682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.