Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012462.1

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

5894 .. 7957

Gene Structure 2064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012462.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

atgacatgcttcctcatcatctccctcgcttttttcatcctccctcaaacccaagccagagtactactgtccgaaacgcaagcaactccggccaccggcttcctctttccgaaagccgagtccacagttctccctgacccttcaccgttctttgccccaagcctcctccaaaccccactccccacaaactctttcttccaaaactttgtactcaacaatggcgaccagcccgaatatttccacccctaccatttcagatcctccaactcctccctctctctctcctacccgactcgccttgccacctccgcttccatatcccagaacttcacccctgaactcaccatctccgccacccaaaacaaccaagaacgccatgtagtctcttccttcagtgacctcggcgtcactctagacttcccctcctccaatctccgcttcttcctcgtcaagggaagcccctacttgacatgcaatgtgtctaatcccaccgcgctttccatttccaccgctagttcaatcacttctttgtttccaaacgctcaacgcaacaagtacacattaaagctcgacaacagtcagacaatgctggtgtactcgtcctctccgattggtctcaccatcagcaacccatcactgatcacttccgacgcattcaccggggttatgagggttgcattgttgccgccaggctctcaagatctcgaggcagttctagaccagttcagttcttcttacccggtttcgggcgaggcagtgttcacagggccttttacattggagtatagatgggtgaaagaaggaaatggagatttgcttatgctagctcatcctctccatcaacaacttctgtctgttcaggacagtaatgccactgttcttgactatctcaagtacagaagcattgacggtgatctcctaggcattgtgggaaactcttgggtgttgaaaacacagcctattccagtctcttggcattcgattacaggtgtcaaggacctagtacaggcattacctgaaataaaagccgctctttctggtgacgttcaggctctaatttcgacaccagtatcaacaacagcttcatatgaatatggaaaattgattgccaaggcggcaaggctggctttgattggtgaagaggtgggtgttaaagatattccagccattacaaagtttttgaaggatgcaattgagccatggttgagtgggactttcagtgggaatggtttcttgtatgaaggtaaatggggtggacttgtaacgaaaaatggagcagttgataaaggtgcagattacgggtttggagtgtataatgatcaccatttccatcttggctattttctctatgcgatttcagtagttgcaaagcttgacgtggattgggggatgaagtttaaggatcaagcttatgctcttgctggggatttcatgaacttaaacaggcagccagattcaagttacccgcggttgaggaacttcgatctctacaatttgcattcgtgggccggagggttaactgaatttgcagatggacgaaatcaagagagtacaagtgaggcagtgaatgcttactactcggctgcattgatggggttagcctatagagacactaatctcactgacacagcatcattgcttgcagcactggagattcaggcagctcaaaagtggtggcatgtgcaccaaggagataacatctatgaggatgtcttcgcgagtcagaataagatcactggaattgtgtggtctaataagagggataccggtctttggtttgcttcagcagagtcgaaagaaatcaggcttggaattcaggtgctgccgatttcccctatcactgaggtcttgttctccaatgccagctatgttagggaggttgtagattggacaataccagctctgaatagggagggagttacggatgcatggagagggtttgcttatgccttggaagggatatacaacaaggaagaggctttgcagaaggttaaaaacttgaaaggttttgatgatgggaactcactttcgaatctcttatggtggatccacagcagaggctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

687

Amino Acids

75.67

Weight (kDa)

5.38

Isoelectric Point (pI)

29.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	404
AccBSI	CCGCTC	1 cut(s)	1031
AccII	CGCG	3 cut(s)	494, 1468, 1718
AclWI	GGATC	4 cut(s)	252, 1410, 2041, 2054
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	2 cut(s)	1523, 1812
AcuI	CTGAAG	2 cut(s)	376, 1767
AcyI	GRCGYC	1 cut(s)	405
AfaI	GTAC	7 cut(s)	63, 210, 557, 596, 896, 1005, 1552
AfiI	CCNNNNNNNGG	7 cut(s)	95, 451, 745, 746, 1006, 1773, 1956
AgeI	ACCGGT	1 cut(s)	1766
AgsI	TTSAA	5 cut(s)	519, 949, 1183, 1458, 2002
AjiI	CACGTC	1 cut(s)	1378
AjnI	CCWGG	1 cut(s)	688
AjuI	GAANNNNNNNTTGG	4 cut(s)	422, 454, 1791, 1823
AluBI	AGCT	8 cut(s)	568, 827, 1082, 1372, 1409, 1664, 1866, 1901
AluI	AGCT	8 cut(s)	568, 827, 1082, 1372, 1409, 1664, 1866, 1901
Alw21I	GWGCWC	1 cut(s)	1686
Alw26I	GTCTC	4 cut(s)	388, 620, 973, 1602
Alw44I	GTGCAC	1 cut(s)	1682
AlwI	GGATC	4 cut(s)	252, 1410, 2041, 2054
AlwNI	CAGNNNCTG	1 cut(s)	1822
Ama87I	CYCGRG	1 cut(s)	704
AoxI	GGCC	3 cut(s)	90, 767, 1506
ApaLI	GTGCAC	1 cut(s)	1682
ApeKI	GCWGC	5 cut(s)	1447, 1583, 1643, 1661, 1822
ApoI	RAATTY	2 cut(s)	1523, 1812
ArsI	GACNNNNNNTTYG	2 cut(s)	104, 136
AsiGI	ACCGGT	1 cut(s)	1766
Asp700I	GAANNNNTTC	1 cut(s)	1229
AspA2I	CCTAGG	1 cut(s)	919
AspLEI	GCGC	1 cut(s)	496
AspS9I	GGNCC	3 cut(s)	767, 997, 1506
AsuC2I	CCSGG	2 cut(s)	661, 740
AsuII	TTCGAA	1 cut(s)	2030
AsuNHI	GCTAGC	1 cut(s)	823
AvaI	CYCGRG	1 cut(s)	704
AvaII	GGWCC	1 cut(s)	997
AvrII	CCTAGG	1 cut(s)	919
BaeGI	GKGCMC	1 cut(s)	1686
BaeI	ACNNNNGTAYC	2 cut(s)	1053, 1086
BamHI	GGATCC	1 cut(s)	2046
BbsI	GAAGAC	1 cut(s)	1705
Bbv12I	GWGCWC	1 cut(s)	1686
BbvI	GCAGC	5 cut(s)	1459, 1570, 1655, 1673, 1809
BccI	CCATC	9 cut(s)	353, 629, 640, 783, 846, 1338, 1526, 1585, 2009
BciT130I	CCWGG	1 cut(s)	690
BciVI	GTATCC	1 cut(s)	1756
BclI	TGATCA	2 cut(s)	639, 1318
BcnI	CCSGG	2 cut(s)	661, 740
BcoDI	GTCTC	4 cut(s)	388, 620, 973, 1602
BfaI	CTAG	7 cut(s)	413, 513, 716, 824, 920, 1001, 2062
BfmI	CTRYAG	1 cut(s)	1603
BfuI	GTATCC	1 cut(s)	1756
BglI	GCCNNNNNGGC	1 cut(s)	1115
BglII	AGATCT	1 cut(s)	700
BisI	GCNGC	8 cut(s)	686, 1029, 1116, 1448, 1584, 1644, 1662, 1823
BlnI	CCTAGG	1 cut(s)	919
BlsI	GCNGC	8 cut(s)	687, 1030, 1117, 1449, 1585, 1645, 1663, 1824
BmcAI	AGTACT	1 cut(s)	63
Bme1390I	CCNGG	3 cut(s)	661, 690, 740
Bme18I	GGWCC	1 cut(s)	997
BmeT110I	CYCGRG	1 cut(s)	704
BmgBI	CACGTC	1 cut(s)	1378
BmgT120I	GGNCC	3 cut(s)	767, 997, 1506
BmiI	GGNNCC	1 cut(s)	2048
BmrFI	CCNGG	3 cut(s)	661, 690, 740
BmsI	GCATC	3 cut(s)	1177, 1640, 1915
BmtI	GCTAGC	1 cut(s)	827
BoxI	GACNNNNGTC	1 cut(s)	576
BpiI	GAAGAC	1 cut(s)	1705
BpmI	CTGGAG	1 cut(s)	1670
Bpu14I	TTCGAA	1 cut(s)	2030
BpuEI	CTTGAG	2 cut(s)	681, 875
BpuMI	CCSGG	2 cut(s)	661, 740
BsaHI	GRCGYC	1 cut(s)	405
BsaI	GGTCTC	1 cut(s)	620
BsaJI	CCNNGG	8 cut(s)	400, 660, 919, 1110, 1199, 1466, 1687, 1950
BsaWI	WCCGGW	1 cut(s)	1766
BsaXI	ACNNNNNCTCC	2 cut(s)	407, 437
Bsc4I	CCNNNNNNNGG	7 cut(s)	95, 451, 745, 746, 1006, 1773, 1956
Bse118I	RCCGGY	2 cut(s)	95, 1766
Bse1I	ACTGG	5 cut(s)	721, 965, 1067, 1653, 1741
Bse3DI	GCAATG	2 cut(s)	481, 1634
BseBI	CCWGG	1 cut(s)	690
BseDI	CCNNGG	8 cut(s)	400, 660, 919, 1110, 1199, 1466, 1687, 1950
BseGI	GGATG	6 cut(s)	36, 829, 1192, 1395, 1714, 1930
BseLI	CCNNNNNNNGG	7 cut(s)	95, 451, 745, 746, 1006, 1773, 1956
BseMI	GCAATG	2 cut(s)	481, 1634
BseMII	CTCAG	1 cut(s)	1833
BseNI	ACTGG	5 cut(s)	721, 965, 1067, 1653, 1741
BseRI	GAGGAG	3 cut(s)	155, 259, 415
BseSI	GKGCMC	1 cut(s)	1686
BseXI	GCAGC	5 cut(s)	1459, 1570, 1655, 1673, 1809
BseYI	CCCAGC	1 cut(s)	1421
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	3 cut(s)	494, 1468, 1718
BshFI	GGCC	3 cut(s)	92, 769, 1508
BshTI	ACCGGT	1 cut(s)	1766
BsiHKAI	GWGCWC	1 cut(s)	1686
BsiHKCI	CYCGRG	1 cut(s)	704
BsiSI	CCGG	6 cut(s)	89, 96, 660, 740, 1509, 1767
BslFI	GGGAC	1 cut(s)	1225
BslI	CCNNNNNNNGG	7 cut(s)	95, 451, 745, 746, 1006, 1773, 1956
BsmAI	GTCTC	4 cut(s)	388, 620, 973, 1602
BsmFI	GGGAC	1 cut(s)	1225
BsmI	GAATGC	4 cut(s)	653, 976, 1498, 1573
BsnI	GGCC	3 cut(s)	92, 769, 1508
Bso31I	GGTCTC	1 cut(s)	620
BsoBI	CYCGRG	1 cut(s)	704
Bsp119I	TTCGAA	1 cut(s)	2030
Bsp1286I	GDGCHC	1 cut(s)	1686
Bsp143I	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
Bsp19I	CCATGG	1 cut(s)	1199
Bsp68I	TCGCGA	1 cut(s)	1718
BspANI	GGCC	3 cut(s)	92, 769, 1508
BspCNI	CTCAG	1 cut(s)	1834
BspFNI	CGCG	3 cut(s)	494, 1468, 1718
BspHI	TCATGA	1 cut(s)	1431
BspLI	GGNNCC	1 cut(s)	2048
BspOI	GCTAGC	1 cut(s)	827
BspPI	GGATC	4 cut(s)	252, 1410, 2041, 2054
BspT104I	TTCGAA	1 cut(s)	2030
BspTNI	GGTCTC	1 cut(s)	620
BsrBI	CCGCTC	1 cut(s)	1031
BsrDI	GCAATG	2 cut(s)	481, 1634
BsrFI	RCCGGY	2 cut(s)	95, 1766
BsrI	ACTGG	5 cut(s)	721, 965, 1067, 1653, 1741
BssAI	RCCGGY	2 cut(s)	95, 1766
BssECI	CCNNGG	8 cut(s)	400, 660, 919, 1110, 1199, 1466, 1687, 1950
BssMI	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
BssNI	GRCGYC	1 cut(s)	405
BssT1I	CCWWGG	5 cut(s)	919, 1110, 1199, 1687, 1950
Bst2UI	CCWGG	1 cut(s)	690
Bst4CI	ACNGT	7 cut(s)	69, 127, 147, 578, 866, 877, 911
Bst6I	CTCTTC	3 cut(s)	391, 1134, 1968
BstACI	GRCGYC	1 cut(s)	405
BstAPI	GCANNNNNTGC	1 cut(s)	1568
BstBI	TTCGAA	1 cut(s)	2030
BstC8I	GCNNGC	5 cut(s)	81, 825, 1125, 1641, 1864
BstDEI	CTNAG	1 cut(s)	1842
BstDSI	CCRYGG	2 cut(s)	1199, 1466
BstENI	CCTNNNNNAGG	2 cut(s)	449, 1004
BstF5I	GGATG	6 cut(s)	36, 829, 1192, 1395, 1714, 1930
BstFNI	CGCG	3 cut(s)	494, 1468, 1718
BstHHI	GCGC	1 cut(s)	496
BstKTI	GATC	9 cut(s)	260, 642, 703, 916, 1321, 1405, 1486, 1734, 2049
BstMAI	GTCTC	4 cut(s)	388, 620, 973, 1602
BstMBI	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
BstMWI	GCNNNNNNNGC	5 cut(s)	89, 308, 1115, 1124, 1568
BstNI	CCWGG	1 cut(s)	690
BstNSI	RCATGY	3 cut(s)	9, 474, 1682
BstPAI	GACNNNNGTC	1 cut(s)	576
BstSCI	CCNGG	3 cut(s)	659, 688, 738
BstSFI	CTRYAG	1 cut(s)	1603
BstSLI	GKGCMC	1 cut(s)	1686
BstUI	CGCG	3 cut(s)	494, 1468, 1718
BstV1I	GCAGC	5 cut(s)	1459, 1570, 1655, 1673, 1809
BstV2I	GAAGAC	1 cut(s)	1705
BstX2I	RGATCY	3 cut(s)	257, 700, 2046
BstXI	CCANNNNNNTGG	1 cut(s)	972
BstYI	RGATCY	3 cut(s)	257, 700, 2046
BsuI	GTATCC	1 cut(s)	1756
BsuRI	GGCC	3 cut(s)	92, 769, 1508
BtgI	CCRYGG	2 cut(s)	1199, 1466
BtrI	CACGTC	1 cut(s)	1378
BtsCI	GGATG	6 cut(s)	36, 829, 1192, 1395, 1714, 1930
BtsI	GCAGTG	2 cut(s)	762, 1569
BtuMI	TCGCGA	1 cut(s)	1718
Cac8I	GCNNGC	5 cut(s)	81, 825, 1125, 1641, 1864
CaiI	CAGNNNCTG	1 cut(s)	1822
CciI	TCATGA	1 cut(s)	1431
CfoI	GCGC	1 cut(s)	496
Cfr10I	RCCGGY	2 cut(s)	95, 1766
Cfr13I	GGNCC	3 cut(s)	767, 997, 1506
Cfr42I	CCGCGG	1 cut(s)	1469
CseI	GACGC	2 cut(s)	394, 659
Csp6I	GTAC	7 cut(s)	62, 209, 556, 595, 895, 1004, 1551
CspAI	ACCGGT	1 cut(s)	1766
CspCI	CAANNNNNGTGG	4 cut(s)	862, 897, 1655, 1690
CviAII	CATG	7 cut(s)	6, 377, 471, 1200, 1432, 1679, 1929
CviQI	GTAC	7 cut(s)	62, 209, 556, 595, 895, 1004, 1551
DdeI	CTNAG	1 cut(s)	1842
DpnI	GATC	9 cut(s)	259, 641, 702, 915, 1320, 1404, 1485, 1733, 2048
DpnII	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
DrdI	GACNNNNNNGTC	1 cut(s)	404
DseDI	GACNNNNNNGTC	1 cut(s)	404
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	3 cut(s)	391, 1134, 1968
EarI	CTCTTC	3 cut(s)	391, 1134, 1968
EciI	GGCGGA	1 cut(s)	340
Eco130I	CCWWGG	5 cut(s)	919, 1110, 1199, 1687, 1950
Eco31I	GGTCTC	1 cut(s)	620
Eco47I	GGWCC	1 cut(s)	997
Eco57I	CTGAAG	2 cut(s)	376, 1767
Eco88I	CYCGRG	1 cut(s)	704
EcoNI	CCTNNNNNAGG	2 cut(s)	449, 1004
EcoO109I	RGGNCCY	2 cut(s)	767, 997
EcoRI	GAATTC	1 cut(s)	1812
EcoRII	CCWGG	1 cut(s)	688
EcoT14I	CCWWGG	5 cut(s)	919, 1110, 1199, 1687, 1950
EcoT22I	ATGCAT	1 cut(s)	1930
ErhI	CCWWGG	5 cut(s)	919, 1110, 1199, 1687, 1950
FaeI	CATG	7 cut(s)	9, 380, 474, 1203, 1435, 1682, 1932
FalI	AAGNNNNNCTT	4 cut(s)	1017, 1049, 1111, 1143
FaqI	GGGAC	1 cut(s)	1225
FatI	CATG	7 cut(s)	5, 376, 470, 1199, 1431, 1678, 1928
FauI	CCCGC	1 cut(s)	1473
FauNDI	CATATG	1 cut(s)	1087
FbaI	TGATCA	2 cut(s)	639, 1318
Fnu4HI	GCNGC	8 cut(s)	686, 1029, 1116, 1448, 1584, 1644, 1662, 1823
FokI	GGATG	6 cut(s)	23, 816, 1199, 1402, 1721, 1937
Fsp4HI	GCNGC	8 cut(s)	686, 1029, 1116, 1448, 1584, 1644, 1662, 1823
FspBI	CTAG	7 cut(s)	413, 513, 716, 824, 920, 1001, 2062
GlaI	GCGC	1 cut(s)	495
GluI	GCNGC	8 cut(s)	686, 1029, 1116, 1448, 1584, 1644, 1662, 1823
GsaI	CCCAGC	1 cut(s)	1425
GsuI	CTGGAG	1 cut(s)	1670
HaeIII	GGCC	3 cut(s)	92, 769, 1508
HapII	CCGG	6 cut(s)	89, 96, 660, 740, 1509, 1767
HgaI	GACGC	2 cut(s)	394, 659
HhaI	GCGC	1 cut(s)	496
Hin1I	GRCGYC	1 cut(s)	405
Hin1II	CATG	7 cut(s)	9, 380, 474, 1203, 1435, 1682, 1932
Hin6I	GCGC	1 cut(s)	494
HinP1I	GCGC	1 cut(s)	494
HincII	GTYRAC	1 cut(s)	1518
HindII	GTYRAC	1 cut(s)	1518
HindIII	AAGCTT	2 cut(s)	1370, 1407
HinfI	GANTC	7 cut(s)	119, 292, 1454, 1654, 1720, 1790, 2032
HpaI	GTTAAC	1 cut(s)	1518
HpaII	CCGG	6 cut(s)	89, 96, 660, 740, 1509, 1767
Hpy166II	GTNNAC	7 cut(s)	123, 558, 595, 762, 1256, 1518, 1684
Hpy188I	TCNGA	8 cut(s)	73, 111, 257, 582, 609, 649, 1725, 1905
Hpy188III	TCNNGA	9 cut(s)	413, 698, 704, 716, 860, 881, 1432, 1544, 1717
Hpy8I	GTNNAC	7 cut(s)	123, 558, 595, 762, 1256, 1518, 1684
Hpy99I	CGWCG	1 cut(s)	653
HpyAV	CCTTC	7 cut(s)	150, 400, 794, 1177, 1235, 1949, 1981
HpyCH4III	ACNGT	7 cut(s)	69, 127, 147, 578, 866, 877, 911
HpyCH4IV	ACGT	2 cut(s)	1044, 1377
HpyF10VI	GCNNNNNNNGC	5 cut(s)	89, 308, 1115, 1124, 1568
HpyF3I	CTNAG	1 cut(s)	1842
HpySE526I	ACGT	2 cut(s)	1044, 1377
Hsp92I	GRCGYC	1 cut(s)	405
Hsp92II	CATG	7 cut(s)	9, 380, 474, 1203, 1435, 1682, 1932
HspAI	GCGC	1 cut(s)	494
Ksp22I	TGATCA	2 cut(s)	639, 1318
KspAI	GTTAAC	1 cut(s)	1518
KspI	CCGCGG	1 cut(s)	1469
Kzo9I	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
LmnI	GCTCC	1 cut(s)	1274
Lsp1109I	GCAGC	5 cut(s)	1459, 1570, 1655, 1673, 1809
LweI	GCATC	3 cut(s)	1177, 1640, 1915
MaeI	CTAG	7 cut(s)	413, 513, 716, 824, 920, 1001, 2062
MaeII	ACGT	2 cut(s)	1044, 1377
MaeIII	GTNAC	6 cut(s)	395, 406, 1040, 1261, 1460, 1918
MalI	GATC	9 cut(s)	259, 641, 702, 915, 1320, 1404, 1485, 1733, 2048
MbiI	CCGCTC	1 cut(s)	1031
MboI	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
MboII	GAAGA	7 cut(s)	187, 378, 433, 723, 1151, 1705, 1985
MfeI	CAATTG	1 cut(s)	1191
MflI	RGATCY	3 cut(s)	257, 700, 2046
MhlI	GDGCHC	1 cut(s)	1686
MluCI	AATT	7 cut(s)	1056, 1100, 1191, 1492, 1523, 1740, 1812
MlyI	GAGTC	4 cut(s)	128, 286, 1729, 1799
MmeI	TCCRAC	2 cut(s)	288, 672
Mph1103I	ATGCAT	1 cut(s)	1930
MroXI	GAANNNNTTC	1 cut(s)	1229
MseI	TTAA	6 cut(s)	563, 1152, 1398, 1439, 1517, 1992
MspA1I	CMGCKG	1 cut(s)	1468
MspI	CCGG	6 cut(s)	89, 96, 660, 740, 1509, 1767
MspR9I	CCNGG	3 cut(s)	661, 690, 740
MunI	CAATTG	1 cut(s)	1191
Mva1269I	GAATGC	4 cut(s)	653, 976, 1498, 1573
MvaI	CCWGG	1 cut(s)	690
MvnI	CGCG	3 cut(s)	494, 1468, 1718
MwoI	GCNNNNNNNGC	5 cut(s)	89, 308, 1115, 1124, 1568
NciI	CCSGG	2 cut(s)	661, 740
NcoI	CCATGG	1 cut(s)	1199
NdeI	CATATG	1 cut(s)	1087
NdeII	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
NheI	GCTAGC	1 cut(s)	823
NlaIII	CATG	7 cut(s)	9, 380, 474, 1203, 1435, 1682, 1932
NlaIV	GGNNCC	1 cut(s)	2048
NmeAIII	GCCGAG	3 cut(s)	142, 381, 1559
NmuCI	GTSAC	3 cut(s)	395, 406, 1040
NruI	TCGCGA	1 cut(s)	1718
NsiI	ATGCAT	1 cut(s)	1930
NspI	RCATGY	3 cut(s)	9, 474, 1682
NspV	TTCGAA	1 cut(s)	2030
PaeR7I	CTCGAG	1 cut(s)	704
PagI	TCATGA	1 cut(s)	1431
PcsI	WCGNNNNNNNCGW	1 cut(s)	605
PctI	GAATGC	4 cut(s)	653, 976, 1498, 1573
PdmI	GAANNNNTTC	1 cut(s)	1229
PfeI	GAWTC	3 cut(s)	1454, 1654, 2032
PinAI	ACCGGT	1 cut(s)	1766
PkrI	GCNGC	8 cut(s)	687, 1030, 1117, 1449, 1585, 1645, 1663, 1824
PleI	GAGTC	4 cut(s)	127, 286, 1728, 1798
PpsI	GAGTC	4 cut(s)	127, 286, 1728, 1798
PpuMI	RGGWCCY	1 cut(s)	997
PshAI	GACNNNNGTC	1 cut(s)	576
Psp5II	RGGWCCY	1 cut(s)	997
Psp6I	CCWGG	1 cut(s)	688
PspFI	CCCAGC	1 cut(s)	1421
PspGI	CCWGG	1 cut(s)	688
PspN4I	GGNNCC	1 cut(s)	2048
PspPI	GGNCC	3 cut(s)	767, 997, 1506
PspPPI	RGGWCCY	1 cut(s)	997
PstNI	CAGNNNCTG	1 cut(s)	1822
PsuI	RGATCY	3 cut(s)	257, 700, 2046
RruI	TCGCGA	1 cut(s)	1718
RsaI	GTAC	7 cut(s)	63, 210, 557, 596, 896, 1005, 1552
RsaNI	GTAC	7 cut(s)	62, 209, 556, 595, 895, 1004, 1551
SacII	CCGCGG	1 cut(s)	1469
SaqAI	TTAA	6 cut(s)	563, 1152, 1398, 1439, 1517, 1992
SatI	GCNGC	8 cut(s)	686, 1029, 1116, 1448, 1584, 1644, 1662, 1823
Sau3AI	GATC	9 cut(s)	257, 639, 700, 913, 1318, 1402, 1483, 1731, 2046
Sau96I	GGNCC	3 cut(s)	767, 997, 1506
ScaI	AGTACT	1 cut(s)	63
SchI	GAGTC	4 cut(s)	128, 286, 1729, 1799
ScrFI	CCNGG	3 cut(s)	661, 690, 740
SduI	GDGCHC	1 cut(s)	1686
SfaNI	GCATC	3 cut(s)	1177, 1640, 1915
SfcI	CTRYAG	1 cut(s)	1603
Sfr274I	CTCGAG	1 cut(s)	704
Sfr303I	CCGCGG	1 cut(s)	1469
SfuI	TTCGAA	1 cut(s)	2030
SgrBI	CCGCGG	1 cut(s)	1469
SinI	GGWCC	1 cut(s)	997
SlaI	CTCGAG	1 cut(s)	704
SmlI	CTYRAG	3 cut(s)	696, 704, 890
SmoI	CTYRAG	3 cut(s)	696, 704, 890
Sse9I	AATT	7 cut(s)	1056, 1100, 1191, 1492, 1523, 1740, 1812
SspI	AATATT	1 cut(s)	236
SspMI	CTAG	7 cut(s)	413, 513, 716, 824, 920, 1001, 2062
StyD4I	CCNGG	3 cut(s)	659, 688, 738
StyI	CCWWGG	5 cut(s)	919, 1110, 1199, 1687, 1950
TaaI	ACNGT	7 cut(s)	69, 127, 147, 578, 866, 877, 911
TaiI	ACGT	2 cut(s)	1047, 1380
TaqI	TCGA	7 cut(s)	570, 705, 980, 1061, 1482, 1793, 2030
TasI	AATT	7 cut(s)	1056, 1100, 1191, 1492, 1523, 1740, 1812
TatI	WGTACW	7 cut(s)	61, 208, 555, 594, 894, 1003, 1550
TauI	GCSGC	3 cut(s)	688, 1031, 1118
TfiI	GAWTC	3 cut(s)	1454, 1654, 2032
Tru1I	TTAA	6 cut(s)	563, 1152, 1398, 1439, 1517, 1992
Tru9I	TTAA	6 cut(s)	563, 1152, 1398, 1439, 1517, 1992
TseFI	GTSAC	3 cut(s)	395, 406, 1040
TseI	GCWGC	5 cut(s)	1447, 1583, 1643, 1661, 1822
Tsp45I	GTSAC	3 cut(s)	395, 406, 1040
TspDTI	ATGAA	7 cut(s)	25, 1074, 1104, 1254, 1406, 1420, 1448
TspGWI	ACGGA	1 cut(s)	1937
VneI	GTGCAC	1 cut(s)	1682
VpaK11BI	GGWCC	1 cut(s)	997
XagI	CCTNNNNNAGG	2 cut(s)	449, 1004
XapI	RAATTY	2 cut(s)	1523, 1812
XbaI	TCTAGA	2 cut(s)	412, 715
XceI	RCATGY	3 cut(s)	9, 474, 1682
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1331
XhoI	CTCGAG	1 cut(s)	704
XmaJI	CCTAGG	1 cut(s)	919
XmnI	GAANNNNTTC	1 cut(s)	1229
XspI	CTAG	7 cut(s)	413, 513, 716, 824, 920, 1001, 2062
ZrmI	AGTACT	1 cut(s)	63
Zsp2I	ATGCAT	1 cut(s)	1930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.