Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Reverse (-)

28232917 .. 28235247

Gene Structure 2331 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0267600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCTTTTCTTGTAGGCTGTCTTCTTGCCTTTGCAGTTATCCTGAATGCTGAAGCAAAAGCGGGGCCATCTAATATAAGCACTGACTCTTCTTTAACACCCACTTCCAACCCCTCGTGGTTGTCAAGCTCCGGTCTGTATGCCTTCGGCTTTTATAAGCAAGGCAATGGCTATGCTGTCGGGATAGTACTGCTTGCTGGAATGCCTGAAAAGACTGTAGTCTGGACTGCAAAACGTGATCACCCCTTGGTCTCCAACAATGCCACCTTGCTCTTTACATCTGGCGGGCTTTCGTTGCAATCGACTCAAGGCGAAACATCTGTGGCGACTATTACTCAGACTGCTTTCTCTGCTTCAATGCTTGACTCGGGTAACTTTGTACTATACGACTCTGATCAGGAAATAGTATGGCAAAGTTTTGACTTTCCAACTGATACTATCTTGCCAAAACAGCGTTTGAGAGCAGGGGAATTGCTGTACTCTGCTAAATCCGAAAGTAATAGCTCAACCGGCATTTTCCGTCTCAGTATGCAAACTGATGGAAACCTTGTTCAGTTCCCGGTATCTGCCCCGGCAAGTACTCCGTATGAGTACTATACATCTAAGACACCAGGAAGTGGAGAGAATGTGACACTAAACCTGGATGTTGATGGCCATCTCTACTTACTCAACAACACTGGTTTTACTATACACAATTTTACGAATGGAGCTACTGATGAAGGCAAATCTTATCTTGTGAGACTCGATGTAGATGGAATTCTTCGCTTGTATTCATATAGTTTGAAGCAGAATGGAAACTGGTCAGTTGAGTGGTCATCTACAAGAGACAAGTGTGACCCTTTAGGTCTATGCGGATTTAATAGTTACTGTGTCACAAGAGATATGGAAGCTGATTGCAAATGCCTTCCAGGATTTGAGTCTATCACGCCAGGGGATCAGACTTCAGGCTGTGGGAGGAATATAGTTGCAGATATTTGCAAGTCAGAGAATGAAAACTTCACATACATCATGGAAGAACTGCCCAGCACAAGATGGCAAAATTTTGCATACATGACTTTGTCATTATCAGACAAAGAAGAGTGCAACAAGGCCTGCTTGGAGGATTGCAACTGTGAAGCCGCACTTTTCGCAGATGGAAGCTGCAAAAAGCAGAGGCTTCCTTTGACTTATGGAAGAAGAATGTTAGATATTCCAAACTCAGCTTTCATCAAAGTTGGTATTTCTAAACCTCCAGCTACAGATAATATTATCCATCCAAAGGGAAACAAGAAAGAAGGTCGAGTTGCAGTCCTTATTGTTGGAGTTTCATTTACTTCTTTTGGGTCCATTTTGTTGGTGATCTCTGTAATTGTGTTTTGGAAACATAATGTTTGGGCTTATAAAAGGATGAATAAGCTCAATGGTGATGTTGAATGGAATGAGGATGTGGCTCCGCGACCATATGCCTATGAACAGTTAGAGAAGATGACTGATAATTTCAAGGAGGAAGTTGGTAGAGGAGCTTCGGCAACAGTTTATAAAGGGGTAATGTTGAGTGGCCAAAAGCTAGTTGCTGTGAAGAAACTAGAGAAAGTTGCAGCTGACGGAGCAAAAGAATTCGAGACTGAGATGAAAGTTATTGGCAGATCACATCACCGGAGTTTAGTACGTTTGCTTGGGTATTGCCTTGATGGACCAAAGAAGCTTTTGGTTTATGAGTACATGAGCAATGGATCACTTGCAGATATACTCTTCACACCTGAGAGGAAACCTTATTGGGAAGAAAGAATGGGAATTGCTCGAAACATAGCACGGGGTTTTCTTTATCTGCATGAAGGGTGTGATACACAGATCATCCACTGTGACATAAAGCCTCAAAACATACTGATGGATGAGTTCATGTGCCCCAAAATCTCTGACTTTGGTTTGGCAAAGTTGCTTCAGCAAGACCAGACTAGAACCACTACCGGCATTAGAGGGACTAAAGGGTACGTTGCACCTGAGTGGCATAGGAAAATGCCTATTACAGTTAAAGCAGATGTTTATAGCTTTGGAATTGTGCTATTGGAGATTGTGTGCTGTCGAAGGAATGTGGACTGGAGTGTTCCTGAGGAGGAAGCTATCTTGGATGAATTGGTCTACCATTACTTCGAGAGTGGTGAGCTCAGTAAATTGCTCGGGGATGAAGAGATAAACAGAAGGCAGTTTGAAAAGGTGATTAAAGTGGGACTTTGGTGCATCCAGGATGAGCCATCGCTTCGTCCTTCTATGAAGAAGGTTTTGCTTATGTTGGAAGGGACTGTGGACATCCCAATCCCTCCGAATCCAAGTTCTTTTCTCAATAATATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

776

Amino Acids

86.39

Weight (kDa)

5.61

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	72 - 154	6.5e-17	D-mannose binding lectin
S_locus_glycop	PF00954	234 - 307	2.4e-09	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	493 - 754	6.8e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	494 - 754	3.2e-45	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	156, 1380, 1518
AccB7I	CCANNNNNTGG	1 cut(s)	617
AccI	GTMKAC	1 cut(s)	2118
AccII	CGCG	1 cut(s)	1435
AciI	CCGC	5 cut(s)	62, 285, 852, 1119, 1433
AclWI	GGATC	2 cut(s)	942, 1720
AcoI	YGGCCR	2 cut(s)	652, 1537
AcsI	RAATTY	3 cut(s)	756, 1039, 1595
AcuI	CTGAAG	3 cut(s)	72, 927, 1904
AfaI	GTAC	8 cut(s)	189, 381, 479, 580, 593, 1647, 1700, 1970
AfiI	CCNNNNNNNGG	2 cut(s)	617, 1258
AgsI	TTSAA	5 cut(s)	357, 784, 1412, 1480, 2189
AjnI	CCWGG	5 cut(s)	610, 639, 907, 928, 2220
AleI	CACNNNNGTG	1 cut(s)	1981
AloI	GAACNNNNNNTCC	2 cut(s)	534, 566
Alw21I	GWGCWC	1 cut(s)	2145
Alw26I	GTCTC	5 cut(s)	256, 527, 733, 819, 1595
AlwI	GGATC	2 cut(s)	942, 1720
Ama87I	CYCGRG	2 cut(s)	367, 2156
AoxI	GGCC	4 cut(s)	65, 652, 1089, 1537
ApeKI	GCWGC	2 cut(s)	1140, 1577
ApoI	RAATTY	3 cut(s)	756, 1039, 1595
AspS9I	GGNCC	3 cut(s)	65, 1323, 1673
AsuC2I	CCSGG	2 cut(s)	560, 572
AsuHPI	GGTGA	6 cut(s)	233, 1348, 1415, 1625, 2150, 2206
AvaI	CYCGRG	2 cut(s)	367, 2156
AvaII	GGWCC	2 cut(s)	1323, 1673
AxyI	CCTNAGG	1 cut(s)	2088
BaeGI	GKGCMC	1 cut(s)	1886
BalI	TGGCCA	2 cut(s)	654, 1539
BanII	GRGCYC	1 cut(s)	2145
BarI	GAAGNNNNNNTAC	3 cut(s)	38, 1486, 1518
BauI	CACGAG	1 cut(s)	115
BbsI	GAAGAC	1 cut(s)	14
Bbv12I	GWGCWC	1 cut(s)	2145
BbvI	GCAGC	2 cut(s)	1127, 1589
BciT130I	CCWGG	5 cut(s)	612, 641, 909, 930, 2222
BclI	TGATCA	2 cut(s)	238, 394
BcnI	CCSGG	2 cut(s)	560, 572
BcoDI	GTCTC	5 cut(s)	256, 527, 733, 819, 1595
BfaI	CTAG	3 cut(s)	1547, 1565, 1935
BfmI	CTRYAG	2 cut(s)	216, 1236
BisI	GCNGC	3 cut(s)	1119, 1141, 1578
BlsI	GCNGC	3 cut(s)	1120, 1142, 1579
BmcAI	AGTACT	3 cut(s)	189, 580, 593
Bme1390I	CCNGG	7 cut(s)	560, 572, 612, 641, 909, 930, 2222
Bme18I	GGWCC	2 cut(s)	1323, 1673
BmeT110I	CYCGRG	2 cut(s)	367, 2156
BmgT120I	GGNCC	3 cut(s)	65, 1323, 1673
BmiI	GGNNCC	3 cut(s)	66, 1324, 1431
BmrFI	CCNGG	7 cut(s)	560, 572, 612, 641, 909, 930, 2222
BmsI	GCATC	1 cut(s)	2226
BoxI	GACNNNNGTC	1 cut(s)	218
BpiI	GAAGAC	1 cut(s)	14
BpmI	CTGGAG	2 cut(s)	1215, 2098
BpuEI	CTTGAG	1 cut(s)	291
BpuMI	CCSGG	2 cut(s)	560, 572
BsaBI	GATNNNNATC	1 cut(s)	654
BsaI	GGTCTC	1 cut(s)	256
BsaJI	CCNNGG	3 cut(s)	246, 570, 929
BsaWI	WCCGGW	2 cut(s)	131, 1635
BsaXI	ACNNNNNCTCC	4 cut(s)	612, 642, 2039, 2069
Bsc4I	CCNNNNNNNGG	2 cut(s)	617, 1258
Bse118I	RCCGGY	2 cut(s)	509, 1946
Bse1I	ACTGG	3 cut(s)	682, 803, 2081
Bse21I	CCTNAGG	1 cut(s)	2088
Bse3DI	GCAATG	2 cut(s)	172, 1714
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	5 cut(s)	612, 641, 909, 930, 2222
BseDI	CCNNGG	3 cut(s)	246, 570, 929
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	2 cut(s)	617, 1258
BseMI	GCAATG	2 cut(s)	172, 1714
BseMII	CTCAG	8 cut(s)	350, 538, 1212, 1596, 1731, 1971, 2079, 2158
BseNI	ACTGG	3 cut(s)	682, 803, 2081
BseRI	GAGGAG	2 cut(s)	1512, 2105
BseSI	GKGCMC	1 cut(s)	1886
BseXI	GCAGC	2 cut(s)	1127, 1589
BseYI	CCCAGC	1 cut(s)	1022
Bsh1236I	CGCG	1 cut(s)	1435
BshFI	GGCC	4 cut(s)	67, 654, 1091, 1539
BsiHKAI	GWGCWC	1 cut(s)	2145
BsiHKCI	CYCGRG	2 cut(s)	367, 2156
BsiSI	CCGG	6 cut(s)	132, 510, 560, 572, 1636, 1947
BslFI	GGGAC	3 cut(s)	1972, 2220, 2290
BslI	CCNNNNNNNGG	2 cut(s)	617, 1258
BsmAI	GTCTC	5 cut(s)	256, 527, 733, 819, 1595
BsmBI	CGTCTC	1 cut(s)	527
BsmFI	GGGAC	3 cut(s)	1972, 2220, 2290
BsmI	GAATGC	2 cut(s)	52, 207
BsnI	GGCC	4 cut(s)	67, 654, 1091, 1539
Bso31I	GGTCTC	1 cut(s)	256
BsoBI	CYCGRG	2 cut(s)	367, 2156
Bsp1286I	GDGCHC	2 cut(s)	1886, 2145
Bsp143I	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
BspACI	CCGC	5 cut(s)	62, 285, 852, 1119, 1433
BspANI	GGCC	4 cut(s)	67, 654, 1091, 1539
BspCNI	CTCAG	8 cut(s)	349, 537, 1211, 1597, 1732, 1972, 2080, 2157
BspFNI	CGCG	1 cut(s)	1435
BspLI	GGNNCC	3 cut(s)	66, 1324, 1431
BspPI	GGATC	2 cut(s)	942, 1720
BspTNI	GGTCTC	1 cut(s)	256
BsrDI	GCAATG	2 cut(s)	172, 1714
BsrFI	RCCGGY	2 cut(s)	509, 1946
BsrI	ACTGG	3 cut(s)	682, 803, 2081
BssAI	RCCGGY	2 cut(s)	509, 1946
BssECI	CCNNGG	3 cut(s)	246, 570, 929
BssMI	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
BssSI	CACGAG	1 cut(s)	115
BssT1I	CCWWGG	1 cut(s)	246
Bst2BI	CACGAG	1 cut(s)	115
Bst2UI	CCWGG	5 cut(s)	612, 641, 909, 930, 2222
Bst4CI	ACNGT	8 cut(s)	217, 869, 1112, 1455, 1513, 1841, 2008, 2281
Bst6I	CTCTTC	4 cut(s)	94, 1071, 1736, 2160
BstC8I	GCNNGC	3 cut(s)	195, 287, 1093
BstDEI	CTNAG	9 cut(s)	336, 524, 603, 1198, 1605, 1740, 1980, 2088, 2144
BstFNI	CGCG	1 cut(s)	1435
BstKTI	GATC	7 cut(s)	241, 397, 937, 1341, 1628, 1715, 1833
BstMAI	GTCTC	5 cut(s)	256, 527, 733, 819, 1595
BstMBI	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
BstMWI	GCNNNNNNNGC	6 cut(s)	295, 350, 451, 510, 1127, 1586
BstNI	CCWGG	5 cut(s)	612, 641, 909, 930, 2222
BstPAI	GACNNNNGTC	1 cut(s)	218
BstSCI	CCNGG	7 cut(s)	558, 570, 610, 639, 907, 928, 2220
BstSFI	CTRYAG	2 cut(s)	216, 1236
BstSLI	GKGCMC	1 cut(s)	1886
BstUI	CGCG	1 cut(s)	1435
BstV1I	GCAGC	2 cut(s)	1127, 1589
BstV2I	GAAGAC	1 cut(s)	14
BstXI	CCANNNNNNTGG	1 cut(s)	1333
Bsu36I	CCTNAGG	1 cut(s)	2088
BsuRI	GGCC	4 cut(s)	67, 654, 1091, 1539
BtgZI	GCGATG	1 cut(s)	2217
BtsIMutI	CAGTG	3 cut(s)	81, 675, 1837
Cac8I	GCNNGC	3 cut(s)	195, 287, 1093
Cfr10I	RCCGGY	2 cut(s)	509, 1946
Cfr13I	GGNCC	3 cut(s)	65, 1323, 1673
Csp6I	GTAC	8 cut(s)	188, 380, 478, 579, 592, 1646, 1699, 1969
CviAII	CATG	5 cut(s)	1009, 1051, 1702, 1811, 1879
CviQI	GTAC	8 cut(s)	188, 380, 478, 579, 592, 1646, 1699, 1969
DdeI	CTNAG	9 cut(s)	336, 524, 603, 1198, 1605, 1740, 1980, 2088, 2144
DpnI	GATC	7 cut(s)	240, 396, 936, 1340, 1627, 1714, 1832
DpnII	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
EaeI	YGGCCR	2 cut(s)	652, 1537
Eam1104I	CTCTTC	4 cut(s)	94, 1071, 1736, 2160
EarI	CTCTTC	4 cut(s)	94, 1071, 1736, 2160
Ecl136II	GAGCTC	1 cut(s)	2143
Eco130I	CCWWGG	1 cut(s)	246
Eco147I	AGGCCT	1 cut(s)	1091
Eco24I	GRGCYC	1 cut(s)	2145
Eco31I	GGTCTC	1 cut(s)	256
Eco47I	GGWCC	2 cut(s)	1323, 1673
Eco53kI	GAGCTC	1 cut(s)	2143
Eco57I	CTGAAG	3 cut(s)	72, 927, 1904
Eco81I	CCTNAGG	1 cut(s)	2088
Eco88I	CYCGRG	2 cut(s)	367, 2156
EcoICRI	GAGCTC	1 cut(s)	2143
EcoRI	GAATTC	2 cut(s)	756, 1595
EcoRII	CCWGG	5 cut(s)	610, 639, 907, 928, 2220
EcoT14I	CCWWGG	1 cut(s)	246
EcoT38I	GRGCYC	1 cut(s)	2145
ErhI	CCWWGG	1 cut(s)	246
Esp3I	CGTCTC	1 cut(s)	527
FaeI	CATG	5 cut(s)	1012, 1054, 1705, 1814, 1882
FalI	AAGNNNNNCTT	6 cut(s)	1079, 1111, 1107, 1139, 2193, 2225
FaqI	GGGAC	3 cut(s)	1972, 2220, 2290
FatI	CATG	5 cut(s)	1008, 1050, 1701, 1810, 1878
FauI	CCCGC	2 cut(s)	55, 278
FauNDI	CATATG	1 cut(s)	1441
FbaI	TGATCA	2 cut(s)	238, 394
FblI	GTMKAC	1 cut(s)	2118
Fnu4HI	GCNGC	3 cut(s)	1119, 1141, 1578
FriOI	GRGCYC	1 cut(s)	2145
Fsp4HI	GCNGC	3 cut(s)	1119, 1141, 1578
FspBI	CTAG	3 cut(s)	1547, 1565, 1935
GluI	GCNGC	3 cut(s)	1119, 1141, 1578
GsaI	CCCAGC	1 cut(s)	1026
GsuI	CTGGAG	2 cut(s)	1215, 2098
HaeIII	GGCC	4 cut(s)	67, 654, 1091, 1539
HapII	CCGG	6 cut(s)	132, 510, 560, 572, 1636, 1947
Hin1II	CATG	5 cut(s)	1012, 1054, 1705, 1814, 1882
HindIII	AAGCTT	1 cut(s)	1682
HinfI	GANTC	7 cut(s)	86, 304, 365, 389, 741, 917, 2302
HpaII	CCGG	6 cut(s)	132, 510, 560, 572, 1636, 1947
HphI	GGTGA	6 cut(s)	233, 1348, 1415, 1625, 2150, 2206
Hpy166II	GTNNAC	3 cut(s)	2074, 2119, 2284
Hpy188I	TCNGA	8 cut(s)	339, 394, 493, 939, 985, 1069, 1897, 2301
Hpy188III	TCNNGA	7 cut(s)	43, 181, 223, 398, 1600, 2087, 2131
Hpy8I	GTNNAC	3 cut(s)	2074, 2119, 2284
HpyCH4III	ACNGT	8 cut(s)	217, 869, 1112, 1455, 1513, 1841, 2008, 2281
HpyCH4IV	ACGT	3 cut(s)	235, 1648, 1971
HpyF10VI	GCNNNNNNNGC	6 cut(s)	295, 350, 451, 510, 1127, 1586
HpyF3I	CTNAG	9 cut(s)	336, 524, 603, 1198, 1605, 1740, 1980, 2088, 2144
HpySE526I	ACGT	3 cut(s)	235, 1648, 1971
Hsp92II	CATG	5 cut(s)	1012, 1054, 1705, 1814, 1882
Ksp22I	TGATCA	2 cut(s)	238, 394
Kzo9I	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
LmnI	GCTCC	5 cut(s)	134, 707, 1435, 1499, 1586
Lsp1109I	GCAGC	2 cut(s)	1127, 1589
LweI	GCATC	1 cut(s)	2226
MaeI	CTAG	3 cut(s)	1547, 1565, 1935
MaeII	ACGT	3 cut(s)	235, 1648, 1971
MaeIII	GTNAC	6 cut(s)	371, 628, 833, 863, 871, 1841
MalI	GATC	7 cut(s)	240, 396, 936, 1340, 1627, 1714, 1832
MboI	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
MhlI	GDGCHC	2 cut(s)	1886, 2145
MlsI	TGGCCA	2 cut(s)	654, 1539
MluNI	TGGCCA	2 cut(s)	654, 1539
MlyI	GAGTC	6 cut(s)	80, 298, 359, 383, 735, 926
MmeI	TCCRAC	5 cut(s)	132, 279, 452, 1279, 2250
Mox20I	TGGCCA	2 cut(s)	654, 1539
MscI	TGGCCA	2 cut(s)	654, 1539
MseI	TTAA	4 cut(s)	95, 858, 2010, 2199
MslI	CAYNNNNRTG	2 cut(s)	1865, 1981
Msp20I	TGGCCA	2 cut(s)	654, 1539
MspA1I	CMGCKG	1 cut(s)	1580
MspI	CCGG	6 cut(s)	132, 510, 560, 572, 1636, 1947
MspR9I	CCNGG	7 cut(s)	560, 572, 612, 641, 909, 930, 2222
Mva1269I	GAATGC	2 cut(s)	52, 207
MvaI	CCWGG	5 cut(s)	612, 641, 909, 930, 2222
MvnI	CGCG	1 cut(s)	1435
MwoI	GCNNNNNNNGC	6 cut(s)	295, 350, 451, 510, 1127, 1586
NciI	CCSGG	2 cut(s)	560, 572
NdeI	CATATG	1 cut(s)	1441
NdeII	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
NlaIII	CATG	5 cut(s)	1012, 1054, 1705, 1814, 1882
NlaIV	GGNNCC	3 cut(s)	66, 1324, 1431
NmuCI	GTSAC	4 cut(s)	628, 833, 871, 1841
OliI	CACNNNNGTG	1 cut(s)	1981
PceI	AGGCCT	1 cut(s)	1091
PcsI	WCGNNNNNNNCGW	1 cut(s)	299
PctI	GAATGC	2 cut(s)	52, 207
PfeI	GAWTC	1 cut(s)	2302
PflFI	GACNNNGTC	1 cut(s)	1057
PflMI	CCANNNNNTGG	1 cut(s)	617
PfoI	TCCNGGA	2 cut(s)	907, 2220
PkrI	GCNGC	3 cut(s)	1120, 1142, 1579
PleI	GAGTC	6 cut(s)	80, 298, 359, 383, 735, 925
PpsI	GAGTC	6 cut(s)	80, 298, 359, 383, 735, 925
PshAI	GACNNNNGTC	1 cut(s)	218
PsiI	TTATAA	3 cut(s)	156, 1380, 1518
Psp124BI	GAGCTC	1 cut(s)	2145
Psp6I	CCWGG	5 cut(s)	610, 639, 907, 928, 2220
PspFI	CCCAGC	1 cut(s)	1022
PspGI	CCWGG	5 cut(s)	610, 639, 907, 928, 2220
PspN4I	GGNNCC	3 cut(s)	66, 1324, 1431
PspPI	GGNCC	3 cut(s)	65, 1323, 1673
PsyI	GACNNNGTC	1 cut(s)	1057
PvuII	CAGCTG	1 cut(s)	1580
RsaI	GTAC	8 cut(s)	189, 381, 479, 580, 593, 1647, 1700, 1970
RsaNI	GTAC	8 cut(s)	188, 380, 478, 579, 592, 1646, 1699, 1969
RseI	CAYNNNNRTG	2 cut(s)	1865, 1981
SacI	GAGCTC	1 cut(s)	2145
SaqAI	TTAA	4 cut(s)	95, 858, 2010, 2199
SatI	GCNGC	3 cut(s)	1119, 1141, 1578
Sau3AI	GATC	7 cut(s)	238, 394, 934, 1338, 1625, 1712, 1830
Sau96I	GGNCC	3 cut(s)	65, 1323, 1673
ScaI	AGTACT	3 cut(s)	189, 580, 593
SchI	GAGTC	6 cut(s)	80, 298, 359, 383, 735, 926
ScrFI	CCNGG	7 cut(s)	560, 572, 612, 641, 909, 930, 2222
SduI	GDGCHC	2 cut(s)	1886, 2145
SfaNI	GCATC	1 cut(s)	2226
SfcI	CTRYAG	2 cut(s)	216, 1236
SinI	GGWCC	2 cut(s)	1323, 1673
SmiMI	CAYNNNNRTG	2 cut(s)	1865, 1981
SmlI	CTYRAG	1 cut(s)	306
SmoI	CTYRAG	1 cut(s)	306
SseBI	AGGCCT	1 cut(s)	1091
SsiI	CCGC	5 cut(s)	62, 285, 852, 1119, 1433
SspI	AATATT	1 cut(s)	1246
SspMI	CTAG	3 cut(s)	1547, 1565, 1935
SstI	GAGCTC	1 cut(s)	2145
StuI	AGGCCT	1 cut(s)	1091
StyD4I	CCNGG	7 cut(s)	558, 570, 610, 639, 907, 928, 2220
StyI	CCWWGG	1 cut(s)	246
TaaI	ACNGT	8 cut(s)	217, 869, 1112, 1455, 1513, 1841, 2008, 2281
TaiI	ACGT	3 cut(s)	238, 1651, 1974
TaqI	TCGA	7 cut(s)	302, 744, 1279, 1599, 1780, 2062, 2130
TatI	WGTACW	6 cut(s)	187, 379, 477, 578, 591, 1698
TauI	GCSGC	1 cut(s)	1121
TfiI	GAWTC	1 cut(s)	2302
Tru1I	TTAA	4 cut(s)	95, 858, 2010, 2199
Tru9I	TTAA	4 cut(s)	95, 858, 2010, 2199
TscAI	CASTG	3 cut(s)	88, 682, 1844
TseFI	GTSAC	4 cut(s)	628, 833, 871, 1841
TseI	GCWGC	2 cut(s)	1140, 1577
Tsp45I	GTSAC	4 cut(s)	628, 833, 871, 1841
TspGWI	ACGGA	3 cut(s)	509, 573, 1599
TspRI	CASTG	3 cut(s)	88, 682, 1844
Tth111I	GACNNNGTC	1 cut(s)	1057
Van91I	CCANNNNNTGG	1 cut(s)	617
VpaK11BI	GGWCC	2 cut(s)	1323, 1673
XapI	RAATTY	3 cut(s)	756, 1039, 1595
XmiI	GTMKAC	1 cut(s)	2118
XspI	CTAG	3 cut(s)	1547, 1565, 1935
ZrmI	AGTACT	3 cut(s)	189, 580, 593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.