Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

77304639 .. 77306744

Gene Structure 2106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021693

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGCTATATAAACACAACCAATTCACCATCACGGCTCCAATGGAGTCGTCTAAGATGACATTGTTCATGTTCATTTTGGCCCTCAGTTTCTCCTTCCTTCAAACCCAAGCTAGAGTATTACTATCCAAACCAGCTCCGGCTGGCTTTCATTTCCCTCAAACCCAATCTACAGTTGTCCCTGACCCTTCACCTTTCTTTGCCTCAAGCCTCCTCCAAACTCCACTCCCCACAAACTCTTTCTTCCAAAACTTTGTACTCAACAACGGCGACGTAGCCGAATATTTCCACCCCTACAGCTTCAGATTCTCCAACTCATCCCTCACTCTATCGTATCCAACACGTATCGCAACCTCCGCTTCGGTACTCCAGAACTTCACAGCTGACCTTAGCATCTCCGCCACACAAAACAACCAGCAAGAACATCAAGTAGTCTCCTCCTTCAGTGACCTCGGCGTCACTCTGGACATCCCCTCCTCCAATCTCCGCTTCTTCCTTGTCAAGGGAAGCCCCTATCTGACATGCAATGTGTCCAATCCCACCGCGCTTTCCATCTCCACCACTCATGCAATCACCACACTATCTCCAAATATAGACCGCAACAAGTACACAATCAGTCTCAACAACAACCAGACATGGCTTCTGTACTCGTCCTCCCCTATTGGTCTCACCAACAGCAACCCTTCACTGATCACATCTGATTCATTTTCAGGCGTTATAAGGGTTGCATTGTTGCCAGGTTCTGATTTTGAGAAGGTTCTAGACCAGTACAGCTCTTCTTACCCGGTTTCCGGTGAAGCCCTCTTGACAGAGGCGTCTACTTTGGAGTATACATGGGAGAAGGCAGGGAATGGAGACTTGCTTATGCTAGCTCATCCTCTGCATCTCCAGCTTCTTTCTGTTAAGGACAGAAATGTCACTGTTCTTGACCAATTCAAGTACAGAAGCATTGACGGTGATCTTGTTGGCATTGTAGGCGACTCTTGGGTGTTGAAAACACAGCCTATTCCAGTCACTTGGCATTCCATTAATGGTATCAAAGACAATGCATCAATACCAGATATTATTGCCGCTCTTTCGAAAGATGTTCAGGCCATAACTTCGACGCCAATATCAATAACGGCTTCATATTTCTATGGCAAGTTGATTGCCAAGGCGGCGAGGCTGGCTTTGATTGCTGAAGAGGTGGGTTCTAATGATGTGATTCCAACCATTAAAAAGTTCTTGGAGGATGCAGTTGAGCCATGGTTGAGTGGGACTTTTGCTGGGAATGGTTTCTTGTATGAAGAATTTGCAGATGGACGGGATCAAGAGAGCACAAGTGAGGCAGTGAATGCTTACTACTCGGCTGCATTGATGGGGTTAGCCTATGGAGACACTAATCTTACCGCCACCGCATCATTGCTTGCAGCACTTGAAATCCAAGCAGCTCAAAAGTGGTGGCATGTGCACCAAGGAGATAACATGTATGAGGACGTTTTCTCAAGTGCAAATGCGATCACAGGAGTAGTGTGGTCTAATAAAAGAGATACTGGACTTTGGTTTGCTGCTCCTGAGTCTAAAGAAATCAGGCTTGGAATTCAGGTTCTTCCGATTTCGCCTATCACTGAGGTCTTGTTCTCTAATGTCAGCTATGTCAAGGAACTGGTAGAGTGGACAGCACCGGCTTTGACTAGGGAGGGAGTTACAGATGCATGGAGAGGGTTTGATTATTCCTTGGAAGGGATATACAACAAAGAAGACGCTTTGCAGAAGATTGAAAACTTGGGTGGTTTCGATGATGGTAACTCACTTACCAATCTTCTGTGGTGGATCCACAGCAGAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

609

Amino Acids

66.84

Weight (kDa)

4.9

Isoelectric Point (pI)

30.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	69 - 339	5.2e-59	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	350 - 429	6.2e-08	Glycosyl hydrolase family 81 C-terminal domain
Glyco_hydro81C	PF17652	429 - 604	8.9e-43	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	716
AasI	GACNNNNNNGTC	3 cut(s)	452, 811, 911
AccBSI	CCGCTC	1 cut(s)	1070
AccI	GTMKAC	2 cut(s)	815, 827
AccII	CGCG	1 cut(s)	542
AciI	CCGC	9 cut(s)	354, 396, 484, 540, 595, 1068, 1154, 1386, 1392
AclWI	GGATC	3 cut(s)	1311, 1804, 1817
AcsI	RAATTY	2 cut(s)	1286, 1575
AcuI	CTGAAG	3 cut(s)	283, 424, 1197
AcyI	GRCGYC	3 cut(s)	453, 812, 1103
AfaI	GTAC	6 cut(s)	255, 363, 605, 644, 767, 938
AfiI	CCNNNNNNNGG	3 cut(s)	499, 788, 1719
AflIII	ACRYGT	2 cut(s)	338, 1461
AgsI	TTSAA	5 cut(s)	101, 934, 991, 1415, 1757
AjnI	CCWGG	1 cut(s)	733
AjuI	GAANNNNNNNTTGG	4 cut(s)	470, 502, 1554, 1586
AloI	GAACNNNNNNTCC	2 cut(s)	1566, 1598
AluBI	AGCT	9 cut(s)	110, 134, 297, 380, 771, 869, 889, 1427, 1629
AluI	AGCT	9 cut(s)	110, 134, 297, 380, 771, 869, 889, 1427, 1629
Alw21I	GWGCWC	2 cut(s)	1316, 1449
Alw26I	GTCTC	5 cut(s)	436, 620, 668, 846, 1365
Alw44I	GTGCAC	1 cut(s)	1445
AlwI	GGATC	3 cut(s)	1311, 1804, 1817
AlwNI	CAGNNNCTG	1 cut(s)	740
AoxI	GGCC	2 cut(s)	78, 1089
ApaLI	GTGCAC	1 cut(s)	1445
ApeKI	GCWGC	4 cut(s)	1346, 1406, 1424, 1544
ApoI	RAATTY	2 cut(s)	1286, 1575
AseI	ATTAAT	1 cut(s)	1026
Asp700I	GAANNNNTTC	1 cut(s)	1271
AspLEI	GCGC	1 cut(s)	544
AspS9I	GGNCC	1 cut(s)	79
AsuC2I	CCSGG	1 cut(s)	782
AsuHPI	GGTGA	6 cut(s)	16, 180, 562, 658, 803, 965
AsuII	TTCGAA	1 cut(s)	1076
AsuNHI	GCTAGC	1 cut(s)	865
BaeGI	GKGCMC	1 cut(s)	1449
BamHI	GGATCC	1 cut(s)	1809
BbsI	GAAGAC	1 cut(s)	1743
Bbv12I	GWGCWC	2 cut(s)	1316, 1449
BbvI	GCAGC	4 cut(s)	1333, 1418, 1436, 1531
BccI	CCATC	5 cut(s)	35, 557, 1289, 1348, 1772
BceAI	ACGGC	3 cut(s)	48, 280, 1134
BciT130I	CCWGG	1 cut(s)	735
BciVI	GTATCC	1 cut(s)	342
BclI	TGATCA	1 cut(s)	687
BcnI	CCSGG	1 cut(s)	782
BcoDI	GTCTC	5 cut(s)	436, 620, 668, 846, 1365
BfaI	CTAG	4 cut(s)	111, 758, 866, 1671
BfmI	CTRYAG	2 cut(s)	168, 292
BfuI	GTATCC	1 cut(s)	342
BglI	GCCNNNNNGGC	1 cut(s)	1154
BisI	GCNGC	6 cut(s)	1068, 1155, 1347, 1407, 1425, 1545
BlsI	GCNGC	6 cut(s)	1069, 1156, 1348, 1408, 1426, 1546
Bme1390I	CCNGG	2 cut(s)	735, 782
BmgT120I	GGNCC	1 cut(s)	79
BmiI	GGNNCC	2 cut(s)	36, 1811
BmrFI	CCNGG	2 cut(s)	735, 782
BmsI	GCATC	6 cut(s)	399, 889, 1055, 1219, 1403, 1678
BmtI	GCTAGC	1 cut(s)	869
BpiI	GAAGAC	1 cut(s)	1743
BpmI	CTGGAG	2 cut(s)	350, 869
Bpu10I	CCTNAGC	1 cut(s)	386
Bpu14I	TTCGAA	1 cut(s)	1076
BpuEI	CTTGAG	2 cut(s)	187, 1465
BpuMI	CCSGG	1 cut(s)	782
BsaAI	YACGTR	1 cut(s)	341
BsaHI	GRCGYC	3 cut(s)	453, 812, 1103
BsaI	GGTCTC	1 cut(s)	668
BsaJI	CCNNGG	5 cut(s)	448, 1149, 1241, 1450, 1713
BsaWI	WCCGGW	1 cut(s)	788
BsaXI	ACNNNNNCTCC	6 cut(s)	455, 485, 565, 595, 635, 665
Bsc4I	CCNNNNNNNGG	3 cut(s)	499, 788, 1719
Bse118I	RCCGGY	1 cut(s)	1660
Bse1I	ACTGG	4 cut(s)	763, 1007, 1534, 1647
Bse3DI	GCAATG	2 cut(s)	529, 1397
BseBI	CCWGG	1 cut(s)	735
BseDI	CCNNGG	5 cut(s)	448, 1149, 1241, 1450, 1713
BseGI	GGATG	4 cut(s)	314, 465, 871, 1234
BseLI	CCNNNNNNNGG	3 cut(s)	499, 788, 1719
BseMI	GCAATG	2 cut(s)	529, 1397
BseMII	CTCAG	3 cut(s)	97, 1542, 1596
BseNI	ACTGG	4 cut(s)	763, 1007, 1534, 1647
BseRI	GAGGAG	3 cut(s)	200, 424, 463
BseSI	GKGCMC	1 cut(s)	1449
BseXI	GCAGC	4 cut(s)	1333, 1418, 1436, 1531
BseYI	CCCAGC	1 cut(s)	1262
Bsh1236I	CGCG	1 cut(s)	542
BshFI	GGCC	2 cut(s)	80, 1091
BsiHKAI	GWGCWC	2 cut(s)	1316, 1449
BsiSI	CCGG	4 cut(s)	137, 782, 789, 1661
BslFI	GGGAC	2 cut(s)	161, 1267
BslI	CCNNNNNNNGG	3 cut(s)	499, 788, 1719
BsmAI	GTCTC	5 cut(s)	436, 620, 668, 846, 1365
BsmFI	GGGAC	2 cut(s)	161, 1267
BsmI	GAATGC	2 cut(s)	1018, 1336
BsnI	GGCC	2 cut(s)	80, 1091
Bso31I	GGTCTC	1 cut(s)	668
Bsp119I	TTCGAA	1 cut(s)	1076
Bsp1286I	GDGCHC	2 cut(s)	1316, 1449
Bsp143I	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
Bsp19I	CCATGG	1 cut(s)	1241
BspACI	CCGC	9 cut(s)	354, 396, 484, 540, 595, 1068, 1154, 1386, 1392
BspANI	GGCC	2 cut(s)	80, 1091
BspCNI	CTCAG	3 cut(s)	96, 1543, 1597
BspFNI	CGCG	1 cut(s)	542
BspLI	GGNNCC	2 cut(s)	36, 1811
BspOI	GCTAGC	1 cut(s)	869
BspPI	GGATC	3 cut(s)	1311, 1804, 1817
BspQI	GCTCTTC	1 cut(s)	778
BspT104I	TTCGAA	1 cut(s)	1076
BspTNI	GGTCTC	1 cut(s)	668
BsrBI	CCGCTC	1 cut(s)	1070
BsrDI	GCAATG	2 cut(s)	529, 1397
BsrFI	RCCGGY	1 cut(s)	1660
BsrI	ACTGG	4 cut(s)	763, 1007, 1534, 1647
BssAI	RCCGGY	1 cut(s)	1660
BssECI	CCNNGG	5 cut(s)	448, 1149, 1241, 1450, 1713
BssMI	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
BssNAI	GTATAC	1 cut(s)	828
BssNI	GRCGYC	3 cut(s)	453, 812, 1103
BssT1I	CCWWGG	4 cut(s)	1149, 1241, 1450, 1713
Bst1107I	GTATAC	1 cut(s)	828
Bst2UI	CCWGG	1 cut(s)	735
Bst4CI	ACNGT	3 cut(s)	172, 919, 953
Bst6I	CTCTTC	2 cut(s)	778, 1173
BstACI	GRCGYC	3 cut(s)	453, 812, 1103
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstBAI	YACGTR	1 cut(s)	341
BstBI	TTCGAA	1 cut(s)	1076
BstC8I	GCNNGC	4 cut(s)	142, 867, 1164, 1404
BstDEI	CTNAG	5 cut(s)	51, 83, 386, 1551, 1605
BstDSI	CCRYGG	1 cut(s)	1241
BstENI	CCTNNNNNAGG	1 cut(s)	497
BstF5I	GGATG	4 cut(s)	314, 465, 871, 1234
BstFNI	CGCG	1 cut(s)	542
BstHHI	GCGC	1 cut(s)	544
BstKTI	GATC	5 cut(s)	690, 958, 1306, 1497, 1812
BstMAI	GTCTC	5 cut(s)	436, 620, 668, 846, 1365
BstMBI	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
BstMWI	GCNNNNNNNGC	7 cut(s)	353, 886, 972, 1154, 1163, 1172, 1331
BstNI	CCWGG	1 cut(s)	735
BstNSI	RCATGY	3 cut(s)	522, 1445, 1465
BstSCI	CCNGG	2 cut(s)	733, 780
BstSFI	CTRYAG	2 cut(s)	168, 292
BstSLI	GKGCMC	1 cut(s)	1449
BstUI	CGCG	1 cut(s)	542
BstV1I	GCAGC	4 cut(s)	1333, 1418, 1436, 1531
BstV2I	GAAGAC	1 cut(s)	1743
BstX2I	RGATCY	1 cut(s)	1809
BstXI	CCANNNNNNTGG	1 cut(s)	1014
BstYI	RGATCY	1 cut(s)	1809
BstZ17I	GTATAC	1 cut(s)	828
BsuI	GTATCC	1 cut(s)	342
BsuRI	GGCC	2 cut(s)	80, 1091
BtgI	CCRYGG	1 cut(s)	1241
BtsCI	GGATG	4 cut(s)	314, 465, 871, 1234
BtsI	GCAGTG	1 cut(s)	1332
BtsIMutI	CAGTG	5 cut(s)	448, 683, 915, 1332, 1602
Cac8I	GCNNGC	4 cut(s)	142, 867, 1164, 1404
CaiI	CAGNNNCTG	1 cut(s)	740
CfoI	GCGC	1 cut(s)	544
Cfr10I	RCCGGY	1 cut(s)	1660
Cfr13I	GGNCC	1 cut(s)	79
CseI	GACGC	4 cut(s)	442, 801, 1111, 1748
Csp6I	GTAC	6 cut(s)	254, 362, 604, 643, 766, 937
CspCI	CAANNNNNGTGG	2 cut(s)	1418, 1453
CviAII	CATG	9 cut(s)	67, 519, 563, 633, 831, 1242, 1442, 1462, 1692
CviQI	GTAC	6 cut(s)	254, 362, 604, 643, 766, 937
DdeI	CTNAG	5 cut(s)	51, 83, 386, 1551, 1605
DpnI	GATC	5 cut(s)	689, 957, 1305, 1496, 1811
DpnII	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
DrdI	GACNNNNNNGTC	3 cut(s)	452, 811, 911
DseDI	GACNNNNNNGTC	3 cut(s)	452, 811, 911
Eam1104I	CTCTTC	2 cut(s)	778, 1173
EarI	CTCTTC	2 cut(s)	778, 1173
EciI	GGCGGA	1 cut(s)	385
Eco130I	CCWWGG	4 cut(s)	1149, 1241, 1450, 1713
Eco31I	GGTCTC	1 cut(s)	668
Eco57I	CTGAAG	3 cut(s)	283, 424, 1197
EcoNI	CCTNNNNNAGG	1 cut(s)	497
EcoRI	GAATTC	1 cut(s)	1575
EcoRII	CCWGG	1 cut(s)	733
EcoT14I	CCWWGG	4 cut(s)	1149, 1241, 1450, 1713
EcoT22I	ATGCAT	2 cut(s)	1048, 1693
ErhI	CCWWGG	4 cut(s)	1149, 1241, 1450, 1713
FaeI	CATG	9 cut(s)	70, 522, 566, 636, 834, 1245, 1445, 1465, 1695
FaqI	GGGAC	2 cut(s)	161, 1267
FatI	CATG	9 cut(s)	66, 518, 562, 632, 830, 1241, 1441, 1461, 1691
FbaI	TGATCA	1 cut(s)	687
FblI	GTMKAC	2 cut(s)	815, 827
Fnu4HI	GCNGC	6 cut(s)	1068, 1155, 1347, 1407, 1425, 1545
FokI	GGATG	4 cut(s)	301, 452, 858, 1241
Fsp4HI	GCNGC	6 cut(s)	1068, 1155, 1347, 1407, 1425, 1545
FspBI	CTAG	4 cut(s)	111, 758, 866, 1671
GlaI	GCGC	1 cut(s)	543
GluI	GCNGC	6 cut(s)	1068, 1155, 1347, 1407, 1425, 1545
GsaI	CCCAGC	1 cut(s)	1266
GsuI	CTGGAG	2 cut(s)	350, 869
HaeIII	GGCC	2 cut(s)	80, 1091
HapII	CCGG	4 cut(s)	137, 782, 789, 1661
HgaI	GACGC	4 cut(s)	442, 801, 1111, 1748
HhaI	GCGC	1 cut(s)	544
Hin1I	GRCGYC	3 cut(s)	453, 812, 1103
Hin1II	CATG	9 cut(s)	70, 522, 566, 636, 834, 1245, 1445, 1465, 1695
Hin6I	GCGC	1 cut(s)	542
HinP1I	GCGC	1 cut(s)	542
HinfI	GANTC	6 cut(s)	44, 303, 698, 977, 1201, 1553
HpaII	CCGG	4 cut(s)	137, 782, 789, 1661
HphI	GGTGA	6 cut(s)	16, 180, 562, 658, 803, 965
Hpy166II	GTNNAC	5 cut(s)	606, 816, 828, 1447, 1653
Hpy188I	TCNGA	5 cut(s)	302, 516, 697, 742, 1590
Hpy188III	TCNNGA	7 cut(s)	367, 461, 758, 802, 923, 1307, 1550
Hpy8I	GTNNAC	5 cut(s)	606, 816, 828, 1447, 1653
Hpy99I	CGWCG	2 cut(s)	272, 1105
HpyAV	CCTTC	8 cut(s)	103, 107, 195, 448, 690, 745, 832, 1712
HpyCH4III	ACNGT	3 cut(s)	172, 919, 953
HpyCH4IV	ACGT	3 cut(s)	270, 340, 1473
HpyF10VI	GCNNNNNNNGC	7 cut(s)	353, 886, 972, 1154, 1163, 1172, 1331
HpyF3I	CTNAG	5 cut(s)	51, 83, 386, 1551, 1605
HpySE526I	ACGT	3 cut(s)	270, 340, 1473
Hsp92I	GRCGYC	3 cut(s)	453, 812, 1103
Hsp92II	CATG	9 cut(s)	70, 522, 566, 636, 834, 1245, 1445, 1465, 1695
HspAI	GCGC	1 cut(s)	542
Ksp22I	TGATCA	1 cut(s)	687
Kzo9I	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
LguI	GCTCTTC	1 cut(s)	778
LmnI	GCTCC	3 cut(s)	40, 139, 1552
Lsp1109I	GCAGC	4 cut(s)	1333, 1418, 1436, 1531
LweI	GCATC	6 cut(s)	399, 889, 1055, 1219, 1403, 1678
MaeI	CTAG	4 cut(s)	111, 758, 866, 1671
MaeII	ACGT	3 cut(s)	270, 340, 1473
MaeIII	GTNAC	6 cut(s)	443, 454, 913, 1009, 1681, 1781
MalI	GATC	5 cut(s)	689, 957, 1305, 1496, 1811
MbiI	CCGCTC	1 cut(s)	1070
MboI	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
MboII	GAAGA	9 cut(s)	232, 481, 765, 1190, 1295, 1577, 1748, 1762, 1790
MflI	RGATCY	1 cut(s)	1809
MhlI	GDGCHC	2 cut(s)	1316, 1449
MluCI	AATT	4 cut(s)	20, 929, 1286, 1575
MlyI	GAGTC	3 cut(s)	53, 971, 1562
MmeI	TCCRAC	3 cut(s)	333, 359, 1229
Mph1103I	ATGCAT	2 cut(s)	1048, 1693
MroXI	GAANNNNTTC	1 cut(s)	1271
MseI	TTAA	3 cut(s)	900, 1026, 1212
MspA1I	CMGCKG	1 cut(s)	380
MspI	CCGG	4 cut(s)	137, 782, 789, 1661
MspR9I	CCNGG	2 cut(s)	735, 782
Mva1269I	GAATGC	2 cut(s)	1018, 1336
MvaI	CCWGG	1 cut(s)	735
MvnI	CGCG	1 cut(s)	542
MwoI	GCNNNNNNNGC	7 cut(s)	353, 886, 972, 1154, 1163, 1172, 1331
NciI	CCSGG	1 cut(s)	782
NcoI	CCATGG	1 cut(s)	1241
NdeII	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
NheI	GCTAGC	1 cut(s)	865
NlaIII	CATG	9 cut(s)	70, 522, 566, 636, 834, 1245, 1445, 1465, 1695
NlaIV	GGNNCC	2 cut(s)	36, 1811
NmeAIII	GCCGAG	2 cut(s)	429, 1322
NmuCI	GTSAC	4 cut(s)	443, 454, 913, 1009
NsiI	ATGCAT	2 cut(s)	1048, 1693
NspI	RCATGY	3 cut(s)	522, 1445, 1465
NspV	TTCGAA	1 cut(s)	1076
PciI	ACATGT	1 cut(s)	1461
PciSI	GCTCTTC	1 cut(s)	778
PctI	GAATGC	2 cut(s)	1018, 1336
PdmI	GAANNNNTTC	1 cut(s)	1271
PfeI	GAWTC	3 cut(s)	303, 698, 1201
PkrI	GCNGC	6 cut(s)	1069, 1156, 1348, 1408, 1426, 1546
PleI	GAGTC	3 cut(s)	52, 971, 1561
PpsI	GAGTC	3 cut(s)	52, 971, 1561
Ppu21I	YACGTR	1 cut(s)	341
PscI	ACATGT	1 cut(s)	1461
PshBI	ATTAAT	1 cut(s)	1026
PsiI	TTATAA	1 cut(s)	716
Psp6I	CCWGG	1 cut(s)	733
PspFI	CCCAGC	1 cut(s)	1262
PspGI	CCWGG	1 cut(s)	733
PspN4I	GGNNCC	2 cut(s)	36, 1811
PspPI	GGNCC	1 cut(s)	79
PstNI	CAGNNNCTG	1 cut(s)	740
PsuI	RGATCY	1 cut(s)	1809
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	6 cut(s)	255, 363, 605, 644, 767, 938
RsaNI	GTAC	6 cut(s)	254, 362, 604, 643, 766, 937
SapI	GCTCTTC	1 cut(s)	778
SaqAI	TTAA	3 cut(s)	900, 1026, 1212
SatI	GCNGC	6 cut(s)	1068, 1155, 1347, 1407, 1425, 1545
Sau3AI	GATC	5 cut(s)	687, 955, 1303, 1494, 1809
Sau96I	GGNCC	1 cut(s)	79
SchI	GAGTC	3 cut(s)	53, 971, 1562
ScrFI	CCNGG	2 cut(s)	735, 782
SduI	GDGCHC	2 cut(s)	1316, 1449
SfaNI	GCATC	6 cut(s)	399, 889, 1055, 1219, 1403, 1678
SfcI	CTRYAG	2 cut(s)	168, 292
SfuI	TTCGAA	1 cut(s)	1076
SmlI	CTYRAG	2 cut(s)	202, 1480
SmoI	CTYRAG	2 cut(s)	202, 1480
Sse9I	AATT	4 cut(s)	20, 929, 1286, 1575
SsiI	CCGC	9 cut(s)	354, 396, 484, 540, 595, 1068, 1154, 1386, 1392
SspI	AATATT	1 cut(s)	281
SspMI	CTAG	4 cut(s)	111, 758, 866, 1671
StyD4I	CCNGG	2 cut(s)	733, 780
StyI	CCWWGG	4 cut(s)	1149, 1241, 1450, 1713
TaaI	ACNGT	3 cut(s)	172, 919, 953
TaiI	ACGT	3 cut(s)	273, 343, 1476
TaqI	TCGA	3 cut(s)	1076, 1100, 1773
TasI	AATT	4 cut(s)	20, 929, 1286, 1575
TatI	WGTACW	5 cut(s)	253, 603, 642, 765, 936
TauI	GCSGC	2 cut(s)	1070, 1157
TfiI	GAWTC	3 cut(s)	303, 698, 1201
Tru1I	TTAA	3 cut(s)	900, 1026, 1212
Tru9I	TTAA	3 cut(s)	900, 1026, 1212
TscAI	CASTG	5 cut(s)	448, 690, 922, 1332, 1609
TseFI	GTSAC	4 cut(s)	443, 454, 913, 1009
TseI	GCWGC	4 cut(s)	1346, 1406, 1424, 1544
Tsp45I	GTSAC	4 cut(s)	443, 454, 913, 1009
TspDTI	ATGAA	6 cut(s)	55, 61, 137, 690, 1113, 1296
TspRI	CASTG	5 cut(s)	448, 690, 922, 1332, 1609
VneI	GTGCAC	1 cut(s)	1445
VspI	ATTAAT	1 cut(s)	1026
XagI	CCTNNNNNAGG	1 cut(s)	497
XapI	RAATTY	2 cut(s)	1286, 1575
XbaI	TCTAGA	1 cut(s)	757
XceI	RCATGY	3 cut(s)	522, 1445, 1465
XmiI	GTMKAC	2 cut(s)	815, 827
XmnI	GAANNNNTTC	1 cut(s)	1271
XspI	CTAG	4 cut(s)	111, 758, 866, 1671
Zsp2I	ATGCAT	2 cut(s)	1048, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.