Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Reverse (-)

6382219 .. 6384638

Gene Structure 2420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGCTTCCAATAATATGACTTTGATGACATTCTTCCTCATCATCTCCCTCGCTTTTTTCATCCTCCCTCAAACCCAAGCCAGAGTACTACTGTCCGAAACGCAAGCAACTCCGGCCACCGGCTTCCTCTTTCCGAAAGCCGAGTCCACAGTTCTCCCTGACCCTTCACCTTTCTTTGCCCCAAGCCTCCTCCAAACCCCACTCCCCACAAACTCTTTCTTCCAAAACTTTGTACTCAACAATGGCGACCAGCCCGAATATTTCCACCCCTACCATTTCAGATCCTCCAACTCCTCCCTCTCTCTCTCCTACCCGAATCGCCTTGCCACCTCCGCTTCCATATCCCAGAACTTCACCCCTGAACTCACCATCTCCGCCACCCAAAACAACCAAGAACGCCATGTAGTCTCTTCCTTCAGTGACCTCAGCGTCACTCTAGACTTCCCCTCCTCCAATCTCCGCTTCTTCCTCGTCAAGGGAAGCCCCTACTTGACATGCAATGTGTCTAATCCCACCGCGCTTTCCATCTCCACCGCTAGTTCAATCACTTCTTTGTTTCCAAACGCTCAACGCAACAAGTACACATTAAAGCTCGACACCAGTCAGACAATGCTGGTGTACTCGTCCTCTCCGATTGGTCTCACTATCAGCAACCCATCACTGATCACTTCCGACGCATTCACCGGGGTTATAAGGGTTGCATTGTTGCCGCCGGGCTCTCAAGATCTCGAGGCAGTTCTAGACCAGTTCAGTTCTTCTTACCCGGTTTCGGGCGAGGCAGTGTTCACAGGGCCGTTTACATTGGAGTATAGATGGGTGAAAGAAGGAAATGGAGATTTGCTTATGCTAGCTCATCCTCTCCATCAACAACTTCTGTCTGTTCAGGACAGTAATGCCACTGTTCTCGACTATCTCAAGTACAGAAGCATTGATGGTGATCTCCTAGGCGTTGTGGGAAACTCTTGGGTGTTGAAAACACAGCCTATTCCAGTCTCTTGGCATTCGATTACAGGTGTCAAGGACTTAGTACAGGCATTACCTGAAATAAAAGCCGCTCTTTCTGGTGACGTTCAGGCTCTAATTTCGACACCAGTATCAACAACAGCTTCTTATGAATATGGAAAATTGATTGCCAAGGCGGCAAGGCTGGCTTTGATTGGTGAAGAGGTGGGTATTAAAGATATTCCAGCCATTACAAAGTTTTTGAAGGATGCAATTGAGCCATGGTTGAGTGGGACTTTCAGTGGGAATGGTTTCTTGTATGAAGGTAAATGGGGTGGACTTGTAACCAAAAATGGAGCAGTTGATAAAGTAGTTGCAAAGCTTGACGTGGATTGGGGGATGAAGTTTAAGGATCAAGCTTATGCTCTTGCTGGGGATTTCATGAACTTAAACAGGCAGCCAGATTCAAGTTACCCGCGGTTGAGGAACTTTGATCTCTACAATTTGCATTCATGGGCTGGAGGGTTAACTGAATTTGCAGATGGACGAAATCAAGAGAGCACAAGTGAGGCAGTGAATGCTTACTACTCGGCTGCATTGATGGGGTTAGCCTATAGAGACCCTAATCTCACTGACACAGCATCATTGCTTGCAGCACTGGAGATTCAGGCAGCTCAAAAGTGGTGGCATGTGCACCAAGGAGATAACATATATGAGGATGTCTTCGCGAGTCAGAATAAGATCACTGGAATTGTGTGGTCTAATAAGAGGGATACCGGTCTTTGGTTTGCTTCAGCAGAGTCGAAAGAAATCAGGCTTGGAATTCAGGTGCTGCCGATTTCCCCTATCACTGAGGTCTTGTTCTCCAATGCCAGCTATGTTAGGGAGGTTGTAGATTGGACAATACCAGCTCTGAATAGGGAGGGAGTTACGGATGCATGGAGAGGGTTTGCTTATGCCTTGGAAGGGACATACAACAAGGAAGAGGCTTTGCAGAAGGTTAAAAACTTGAAAGGTTTTGATGATGGGAACTCACTTTCGAATCTCTTATGGTGGATCCACAGCAGAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

671

Amino Acids

73.83

Weight (kDa)

5.34

Isoelectric Point (pI)

31.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	64 - 332	3.7e-58	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	345 - 434	4.5e-10	Glycosyl hydrolase family 81 C-terminal domain
Glyco_hydro81C	PF17652	438 - 666	1.9e-63	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	692
AasI	GACNNNNNNGTC	1 cut(s)	428
AccBSI	CCGCTC	1 cut(s)	1055
AccII	CGCG	3 cut(s)	518, 1420, 1670
AclWI	GGATC	4 cut(s)	276, 1362, 1993, 2006
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	2 cut(s)	1475, 1764
AcuI	CTGAAG	2 cut(s)	400, 1719
AfaI	GTAC	6 cut(s)	87, 234, 581, 620, 920, 1029
AfiI	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1725, 1908
AgeI	ACCGGT	1 cut(s)	1718
AgsI	TTSAA	5 cut(s)	543, 973, 1207, 1410, 1954
AjiI	CACGTC	1 cut(s)	1330
AjuI	GAANNNNNNNTTGG	4 cut(s)	446, 478, 1743, 1775
AluBI	AGCT	8 cut(s)	592, 851, 1106, 1324, 1361, 1616, 1818, 1853
AluI	AGCT	8 cut(s)	592, 851, 1106, 1324, 1361, 1616, 1818, 1853
Alw21I	GWGCWC	2 cut(s)	1505, 1638
Alw26I	GTCTC	4 cut(s)	412, 644, 997, 1554
Alw44I	GTGCAC	1 cut(s)	1634
AlwI	GGATC	4 cut(s)	276, 1362, 1993, 2006
AlwNI	CAGNNNCTG	1 cut(s)	1774
Ama87I	CYCGRG	1 cut(s)	728
AoxI	GGCC	2 cut(s)	114, 791
ApaLI	GTGCAC	1 cut(s)	1634
ApeKI	GCWGC	5 cut(s)	1399, 1535, 1595, 1613, 1774
ApoI	RAATTY	2 cut(s)	1475, 1764
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AsiGI	ACCGGT	1 cut(s)	1718
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspA2I	CCTAGG	1 cut(s)	943
AspLEI	GCGC	1 cut(s)	520
AspS9I	GGNCC	1 cut(s)	791
AsuC2I	CCSGG	3 cut(s)	685, 714, 764
AsuHPI	GGTGA	8 cut(s)	159, 346, 358, 673, 829, 947, 1076, 1172
AsuII	TTCGAA	1 cut(s)	1982
AsuNHI	GCTAGC	1 cut(s)	847
AvaI	CYCGRG	1 cut(s)	728
AvrII	CCTAGG	1 cut(s)	943
BaeGI	GKGCMC	1 cut(s)	1638
BaeI	ACNNNNGTAYC	2 cut(s)	1077, 1110
BamHI	GGATCC	1 cut(s)	1998
BanII	GRGCYC	1 cut(s)	719
BbsI	GAAGAC	1 cut(s)	1657
Bbv12I	GWGCWC	2 cut(s)	1505, 1638
BbvCI	CCTCAGC	1 cut(s)	425
BbvI	GCAGC	5 cut(s)	1411, 1522, 1607, 1625, 1761
BccI	CCATC	9 cut(s)	377, 533, 664, 807, 870, 926, 1478, 1537, 1961
BceAI	ACGGC	1 cut(s)	778
BciVI	GTATCC	1 cut(s)	1708
BclI	TGATCA	1 cut(s)	663
BcnI	CCSGG	3 cut(s)	685, 714, 764
BcoDI	GTCTC	4 cut(s)	412, 644, 997, 1554
BfaI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2014
BfmI	CTRYAG	1 cut(s)	1555
BfuI	GTATCC	1 cut(s)	1708
BglI	GCCNNNNNGGC	1 cut(s)	1139
BglII	AGATCT	1 cut(s)	724
BisI	GCNGC	8 cut(s)	710, 1053, 1140, 1400, 1536, 1596, 1614, 1775
BlnI	CCTAGG	1 cut(s)	943
BlsI	GCNGC	8 cut(s)	711, 1054, 1141, 1401, 1537, 1597, 1615, 1776
BmcAI	AGTACT	1 cut(s)	87
Bme1390I	CCNGG	3 cut(s)	685, 714, 764
BmeT110I	CYCGRG	1 cut(s)	728
BmgBI	CACGTC	1 cut(s)	1330
BmgT120I	GGNCC	1 cut(s)	791
BmiI	GGNNCC	1 cut(s)	2000
BmrFI	CCNGG	3 cut(s)	685, 714, 764
BmsI	GCATC	3 cut(s)	1201, 1592, 1867
BmtI	GCTAGC	1 cut(s)	851
BoxI	GACNNNNGTC	1 cut(s)	600
BpiI	GAAGAC	1 cut(s)	1657
BpmI	CTGGAG	2 cut(s)	1482, 1622
Bpu10I	CCTNAGC	1 cut(s)	425
Bpu14I	TTCGAA	1 cut(s)	1982
BpuEI	CTTGAG	2 cut(s)	705, 899
BpuMI	CCSGG	3 cut(s)	685, 714, 764
BsaBI	GATNNNNATC	1 cut(s)	936
BsaI	GGTCTC	2 cut(s)	644, 1554
BsaJI	CCNNGG	7 cut(s)	684, 943, 1134, 1223, 1418, 1639, 1902
BsaWI	WCCGGW	1 cut(s)	1718
BsaXI	ACNNNNNCTCC	2 cut(s)	431, 461
Bsc4I	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1725, 1908
Bse118I	RCCGGY	2 cut(s)	119, 1718
Bse1I	ACTGG	6 cut(s)	600, 745, 989, 1091, 1605, 1693
Bse3DI	GCAATG	2 cut(s)	505, 1586
Bse8I	GATNNNNATC	1 cut(s)	936
BseDI	CCNNGG	7 cut(s)	684, 943, 1134, 1223, 1418, 1639, 1902
BseGI	GGATG	6 cut(s)	60, 853, 1216, 1347, 1666, 1882
BseJI	GATNNNNATC	1 cut(s)	936
BseLI	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1725, 1908
BseMI	GCAATG	2 cut(s)	505, 1586
BseMII	CTCAG	2 cut(s)	439, 1785
BseNI	ACTGG	6 cut(s)	600, 745, 989, 1091, 1605, 1693
BseRI	GAGGAG	3 cut(s)	179, 283, 439
BseSI	GKGCMC	1 cut(s)	1638
BseXI	GCAGC	5 cut(s)	1411, 1522, 1607, 1625, 1761
BseYI	CCCAGC	1 cut(s)	1373
Bsh1236I	CGCG	3 cut(s)	518, 1420, 1670
BshFI	GGCC	2 cut(s)	116, 793
BshTI	ACCGGT	1 cut(s)	1718
BsiHKAI	GWGCWC	2 cut(s)	1505, 1638
BsiHKCI	CYCGRG	1 cut(s)	728
BsiSI	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1719
BslFI	GGGAC	2 cut(s)	1249, 1924
BslI	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1725, 1908
BsmAI	GTCTC	4 cut(s)	412, 644, 997, 1554
BsmFI	GGGAC	2 cut(s)	1249, 1924
BsmI	GAATGC	4 cut(s)	677, 1000, 1450, 1525
BsnI	GGCC	2 cut(s)	116, 793
Bso31I	GGTCTC	2 cut(s)	644, 1554
BsoBI	CYCGRG	1 cut(s)	728
Bsp119I	TTCGAA	1 cut(s)	1982
Bsp1286I	GDGCHC	3 cut(s)	719, 1505, 1638
Bsp143I	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
Bsp19I	CCATGG	1 cut(s)	1223
Bsp68I	TCGCGA	1 cut(s)	1670
BspANI	GGCC	2 cut(s)	116, 793
BspCNI	CTCAG	2 cut(s)	438, 1786
BspFNI	CGCG	3 cut(s)	518, 1420, 1670
BspHI	TCATGA	1 cut(s)	1383
BspLI	GGNNCC	1 cut(s)	2000
BspOI	GCTAGC	1 cut(s)	851
BspPI	GGATC	4 cut(s)	276, 1362, 1993, 2006
BspT104I	TTCGAA	1 cut(s)	1982
BspTNI	GGTCTC	2 cut(s)	644, 1554
BsrBI	CCGCTC	1 cut(s)	1055
BsrDI	GCAATG	2 cut(s)	505, 1586
BsrFI	RCCGGY	2 cut(s)	119, 1718
BsrI	ACTGG	6 cut(s)	600, 745, 989, 1091, 1605, 1693
BssAI	RCCGGY	2 cut(s)	119, 1718
BssECI	CCNNGG	7 cut(s)	684, 943, 1134, 1223, 1418, 1639, 1902
BssMI	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
BssT1I	CCWWGG	5 cut(s)	943, 1134, 1223, 1639, 1902
Bst4CI	ACNGT	4 cut(s)	93, 151, 890, 901
Bst6I	CTCTTC	3 cut(s)	415, 1158, 1920
BstAPI	GCANNNNNTGC	1 cut(s)	1520
BstBI	TTCGAA	1 cut(s)	1982
BstC8I	GCNNGC	5 cut(s)	105, 849, 1149, 1593, 1816
BstDEI	CTNAG	3 cut(s)	425, 1024, 1794
BstDSI	CCRYGG	2 cut(s)	1223, 1418
BstENI	CCTNNNNNAGG	1 cut(s)	473
BstF5I	GGATG	6 cut(s)	60, 853, 1216, 1347, 1666, 1882
BstFNI	CGCG	3 cut(s)	518, 1420, 1670
BstHHI	GCGC	1 cut(s)	520
BstKTI	GATC	8 cut(s)	284, 666, 727, 940, 1357, 1438, 1686, 2001
BstMAI	GTCTC	4 cut(s)	412, 644, 997, 1554
BstMBI	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
BstMWI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1520
BstNSI	RCATGY	2 cut(s)	498, 1634
BstPAI	GACNNNNGTC	1 cut(s)	600
BstSCI	CCNGG	3 cut(s)	683, 712, 762
BstSFI	CTRYAG	1 cut(s)	1555
BstSLI	GKGCMC	1 cut(s)	1638
BstUI	CGCG	3 cut(s)	518, 1420, 1670
BstV1I	GCAGC	5 cut(s)	1411, 1522, 1607, 1625, 1761
BstV2I	GAAGAC	1 cut(s)	1657
BstX2I	RGATCY	3 cut(s)	281, 724, 1998
BstXI	CCANNNNNNTGG	1 cut(s)	996
BstYI	RGATCY	3 cut(s)	281, 724, 1998
BsuI	GTATCC	1 cut(s)	1708
BsuRI	GGCC	2 cut(s)	116, 793
BtgI	CCRYGG	2 cut(s)	1223, 1418
BtrI	CACGTC	1 cut(s)	1330
BtsCI	GGATG	6 cut(s)	60, 853, 1216, 1347, 1666, 1882
BtsI	GCAGTG	2 cut(s)	786, 1521
BtuMI	TCGCGA	1 cut(s)	1670
Cac8I	GCNNGC	5 cut(s)	105, 849, 1149, 1593, 1816
CaiI	CAGNNNCTG	1 cut(s)	1774
CciI	TCATGA	1 cut(s)	1383
CfoI	GCGC	1 cut(s)	520
Cfr10I	RCCGGY	2 cut(s)	119, 1718
Cfr13I	GGNCC	1 cut(s)	791
Cfr42I	CCGCGG	1 cut(s)	1421
CseI	GACGC	2 cut(s)	418, 683
Csp6I	GTAC	6 cut(s)	86, 233, 580, 619, 919, 1028
CspAI	ACCGGT	1 cut(s)	1718
CspCI	CAANNNNNGTGG	2 cut(s)	1607, 1642
CviAII	CATG	7 cut(s)	401, 495, 1224, 1384, 1455, 1631, 1881
CviQI	GTAC	6 cut(s)	86, 233, 580, 619, 919, 1028
DdeI	CTNAG	3 cut(s)	425, 1024, 1794
DpnI	GATC	8 cut(s)	283, 665, 726, 939, 1356, 1437, 1685, 2000
DpnII	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
DrdI	GACNNNNNNGTC	1 cut(s)	428
DseDI	GACNNNNNNGTC	1 cut(s)	428
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	3 cut(s)	415, 1158, 1920
EarI	CTCTTC	3 cut(s)	415, 1158, 1920
EciI	GGCGGA	1 cut(s)	364
Eco130I	CCWWGG	5 cut(s)	943, 1134, 1223, 1639, 1902
Eco24I	GRGCYC	1 cut(s)	719
Eco31I	GGTCTC	2 cut(s)	644, 1554
Eco57I	CTGAAG	2 cut(s)	400, 1719
Eco88I	CYCGRG	1 cut(s)	728
EcoNI	CCTNNNNNAGG	1 cut(s)	473
EcoRI	GAATTC	1 cut(s)	1764
EcoT14I	CCWWGG	5 cut(s)	943, 1134, 1223, 1639, 1902
EcoT22I	ATGCAT	1 cut(s)	1882
EcoT38I	GRGCYC	1 cut(s)	719
ErhI	CCWWGG	5 cut(s)	943, 1134, 1223, 1639, 1902
FaeI	CATG	7 cut(s)	404, 498, 1227, 1387, 1458, 1634, 1884
FalI	AAGNNNNNCTT	4 cut(s)	1041, 1073, 1135, 1167
FaqI	GGGAC	2 cut(s)	1249, 1924
FatI	CATG	7 cut(s)	400, 494, 1223, 1383, 1454, 1630, 1880
FauI	CCCGC	1 cut(s)	1425
FbaI	TGATCA	1 cut(s)	663
Fnu4HI	GCNGC	8 cut(s)	710, 1053, 1140, 1400, 1536, 1596, 1614, 1775
FokI	GGATG	6 cut(s)	47, 840, 1223, 1354, 1673, 1889
FriOI	GRGCYC	1 cut(s)	719
Fsp4HI	GCNGC	8 cut(s)	710, 1053, 1140, 1400, 1536, 1596, 1614, 1775
FspBI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2014
GlaI	GCGC	1 cut(s)	519
GluI	GCNGC	8 cut(s)	710, 1053, 1140, 1400, 1536, 1596, 1614, 1775
GsaI	CCCAGC	1 cut(s)	1377
GsuI	CTGGAG	2 cut(s)	1482, 1622
HaeIII	GGCC	2 cut(s)	116, 793
HapII	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1719
HgaI	GACGC	2 cut(s)	418, 683
HhaI	GCGC	1 cut(s)	520
Hin1II	CATG	7 cut(s)	404, 498, 1227, 1387, 1458, 1634, 1884
Hin6I	GCGC	1 cut(s)	518
HinP1I	GCGC	1 cut(s)	518
HincII	GTYRAC	1 cut(s)	1470
HindII	GTYRAC	1 cut(s)	1470
HindIII	AAGCTT	2 cut(s)	1322, 1359
HinfI	GANTC	7 cut(s)	143, 316, 1406, 1606, 1672, 1742, 1984
HpaI	GTTAAC	1 cut(s)	1470
HpaII	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1719
HphI	GGTGA	8 cut(s)	159, 346, 358, 673, 829, 947, 1076, 1172
Hpy166II	GTNNAC	8 cut(s)	147, 582, 619, 786, 798, 1280, 1470, 1636
Hpy188I	TCNGA	8 cut(s)	97, 135, 281, 606, 633, 673, 1677, 1857
Hpy188III	TCNNGA	9 cut(s)	437, 722, 728, 740, 884, 905, 1384, 1496, 1669
Hpy8I	GTNNAC	8 cut(s)	147, 582, 619, 786, 798, 1280, 1470, 1636
Hpy99I	CGWCG	1 cut(s)	677
HpyAV	CCTTC	7 cut(s)	174, 424, 818, 1201, 1259, 1901, 1933
HpyCH4III	ACNGT	4 cut(s)	93, 151, 890, 901
HpyCH4IV	ACGT	2 cut(s)	1068, 1329
HpyF10VI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1520
HpyF3I	CTNAG	3 cut(s)	425, 1024, 1794
HpySE526I	ACGT	2 cut(s)	1068, 1329
Hsp92II	CATG	7 cut(s)	404, 498, 1227, 1387, 1458, 1634, 1884
HspAI	GCGC	1 cut(s)	518
Ksp22I	TGATCA	1 cut(s)	663
KspAI	GTTAAC	1 cut(s)	1470
KspI	CCGCGG	1 cut(s)	1421
Kzo9I	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
LmnI	GCTCC	1 cut(s)	1298
Lsp1109I	GCAGC	5 cut(s)	1411, 1522, 1607, 1625, 1761
LweI	GCATC	3 cut(s)	1201, 1592, 1867
MaeI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2014
MaeII	ACGT	2 cut(s)	1068, 1329
MaeIII	GTNAC	6 cut(s)	419, 430, 1064, 1285, 1412, 1870
MalI	GATC	8 cut(s)	283, 665, 726, 939, 1356, 1437, 1685, 2000
MbiI	CCGCTC	1 cut(s)	1055
MboI	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
MboII	GAAGA	8 cut(s)	25, 211, 402, 457, 747, 1175, 1657, 1937
MfeI	CAATTG	1 cut(s)	1215
MflI	RGATCY	3 cut(s)	281, 724, 1998
MhlI	GDGCHC	3 cut(s)	719, 1505, 1638
MluCI	AATT	7 cut(s)	1080, 1124, 1215, 1444, 1475, 1692, 1764
MlyI	GAGTC	3 cut(s)	152, 1681, 1751
MmeI	TCCRAC	2 cut(s)	312, 696
Mph1103I	ATGCAT	1 cut(s)	1882
MroXI	GAANNNNTTC	1 cut(s)	1253
MseI	TTAA	6 cut(s)	587, 1176, 1350, 1391, 1469, 1944
MspA1I	CMGCKG	1 cut(s)	1420
MspI	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1719
MspR9I	CCNGG	3 cut(s)	685, 714, 764
MunI	CAATTG	1 cut(s)	1215
Mva1269I	GAATGC	4 cut(s)	677, 1000, 1450, 1525
MvnI	CGCG	3 cut(s)	518, 1420, 1670
MwoI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1520
NciI	CCSGG	3 cut(s)	685, 714, 764
NcoI	CCATGG	1 cut(s)	1223
NdeII	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
NheI	GCTAGC	1 cut(s)	847
NlaIII	CATG	7 cut(s)	404, 498, 1227, 1387, 1458, 1634, 1884
NlaIV	GGNNCC	1 cut(s)	2000
NmeAIII	GCCGAG	2 cut(s)	166, 1511
NmuCI	GTSAC	3 cut(s)	419, 430, 1064
NruI	TCGCGA	1 cut(s)	1670
NsiI	ATGCAT	1 cut(s)	1882
NspI	RCATGY	2 cut(s)	498, 1634
NspV	TTCGAA	1 cut(s)	1982
PaeR7I	CTCGAG	1 cut(s)	728
PagI	TCATGA	1 cut(s)	1383
PcsI	WCGNNNNNNNCGW	1 cut(s)	629
PctI	GAATGC	4 cut(s)	677, 1000, 1450, 1525
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	4 cut(s)	316, 1406, 1606, 1984
PinAI	ACCGGT	1 cut(s)	1718
PkrI	GCNGC	8 cut(s)	711, 1054, 1141, 1401, 1537, 1597, 1615, 1776
PleI	GAGTC	3 cut(s)	151, 1680, 1750
PpsI	GAGTC	3 cut(s)	151, 1680, 1750
PshAI	GACNNNNGTC	1 cut(s)	600
PsiI	TTATAA	1 cut(s)	692
PspFI	CCCAGC	1 cut(s)	1373
PspN4I	GGNNCC	1 cut(s)	2000
PspPI	GGNCC	1 cut(s)	791
PstNI	CAGNNNCTG	1 cut(s)	1774
PsuI	RGATCY	3 cut(s)	281, 724, 1998
RruI	TCGCGA	1 cut(s)	1670
RsaI	GTAC	6 cut(s)	87, 234, 581, 620, 920, 1029
RsaNI	GTAC	6 cut(s)	86, 233, 580, 619, 919, 1028
SacII	CCGCGG	1 cut(s)	1421
SaqAI	TTAA	6 cut(s)	587, 1176, 1350, 1391, 1469, 1944
SatI	GCNGC	8 cut(s)	710, 1053, 1140, 1400, 1536, 1596, 1614, 1775
Sau3AI	GATC	8 cut(s)	281, 663, 724, 937, 1354, 1435, 1683, 1998
Sau96I	GGNCC	1 cut(s)	791
ScaI	AGTACT	1 cut(s)	87
SchI	GAGTC	3 cut(s)	152, 1681, 1751
ScrFI	CCNGG	3 cut(s)	685, 714, 764
SduI	GDGCHC	3 cut(s)	719, 1505, 1638
SfaNI	GCATC	3 cut(s)	1201, 1592, 1867
SfcI	CTRYAG	1 cut(s)	1555
Sfr274I	CTCGAG	1 cut(s)	728
Sfr303I	CCGCGG	1 cut(s)	1421
SfuI	TTCGAA	1 cut(s)	1982
SgrBI	CCGCGG	1 cut(s)	1421
SlaI	CTCGAG	1 cut(s)	728
SmlI	CTYRAG	3 cut(s)	720, 728, 914
SmoI	CTYRAG	3 cut(s)	720, 728, 914
Sse9I	AATT	7 cut(s)	1080, 1124, 1215, 1444, 1475, 1692, 1764
SspI	AATATT	1 cut(s)	260
SspMI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2014
StyD4I	CCNGG	3 cut(s)	683, 712, 762
StyI	CCWWGG	5 cut(s)	943, 1134, 1223, 1639, 1902
TaaI	ACNGT	4 cut(s)	93, 151, 890, 901
TaiI	ACGT	2 cut(s)	1071, 1332
TaqI	TCGA	7 cut(s)	594, 729, 906, 1004, 1085, 1745, 1982
TasI	AATT	7 cut(s)	1080, 1124, 1215, 1444, 1475, 1692, 1764
TatI	WGTACW	6 cut(s)	85, 232, 579, 618, 918, 1027
TauI	GCSGC	3 cut(s)	712, 1055, 1142
TfiI	GAWTC	4 cut(s)	316, 1406, 1606, 1984
Tru1I	TTAA	6 cut(s)	587, 1176, 1350, 1391, 1469, 1944
Tru9I	TTAA	6 cut(s)	587, 1176, 1350, 1391, 1469, 1944
TseFI	GTSAC	3 cut(s)	419, 430, 1064
TseI	GCWGC	5 cut(s)	1399, 1535, 1595, 1613, 1774
Tsp45I	GTSAC	3 cut(s)	419, 430, 1064
TspDTI	ATGAA	7 cut(s)	49, 1128, 1278, 1358, 1372, 1400, 1443
TspGWI	ACGGA	1 cut(s)	1889
VneI	GTGCAC	1 cut(s)	1634
XagI	CCTNNNNNAGG	1 cut(s)	473
XapI	RAATTY	2 cut(s)	1475, 1764
XbaI	TCTAGA	2 cut(s)	436, 739
XceI	RCATGY	2 cut(s)	498, 1634
XhoI	CTCGAG	1 cut(s)	728
XmaJI	CCTAGG	1 cut(s)	943
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2014
ZrmI	AGTACT	1 cut(s)	87
Zsp2I	ATGCAT	1 cut(s)	1882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.