Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

5755511 .. 5757658

Gene Structure 2148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1081700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGGATCACCACCTCCGGAAGAAGAATCCAAAACCCTGTCGTCACCACCTCCGGAAGAAGAATCCCAAACCAAGTCACTACCACCGCAGCAAACTCTCAGACCACCCACCGCCGCCGCCTCATTCCTCTTCCCCGAAACCCAATCCACCGTCCTACCCGACCCATCAAACTTCTTCTCCCAAGACCTCCTCTCATCCCCTCTCCCCACCGAGTCCTTCTTCCAAAACTTCGCTCTCAAAAACGGCGACCAACCCGAATACATCCACCCTTACGCCGTCAAATCCTCCTCCGCCGCCCTAACCATCTCGTACCCATCTCTCTCCTCCACCTCCGCCTTCACACACCAAATCTTCACCGCCGATCTCGCCATTTCCGCCACCCAAAAACCCGATTCTCCACAACCCCACAAAATCTCCTCCTTCAACGACCTCAGCGTCACATTGGACTTCCCCTCTTCCAACCTCAGCTTCTTCCTCGTCCGCGGCAGCCCATTCATCACGTGCTCTGTTTCCAACGCCACCTCTCTTTCAATCTCCACCATCCACTCAATCCTCTCGTGTTCACCAAACGACTCAAAGACCAAATACACCATCAAGCTCAGTAACAATCAGACATGGCTTGTATACACTTCTTCCCCGATCGATTTGGCAACCAACTGCCTGTCACCGATCACCTCCAATGAGTTTTCTGGGATAGTTCGGATTGCGATATTACCGGATTCGGATCCGAAATTCGAGGCGACCCTTGACCCGGTCAGTCCTTGCTACCCGGTTTCTGGCGAAGCGGTTTTCACAAAGCCGTTTGCTTTGGAATACAAATGGGAGAAGAAAGGATCGGGCGATTTGCTCATGCTTGCTCATCCTCTGCACCTCCAGCTTCTCTCCCGCGAGGATTCTGACGTCACTGTTTTGGAGGATTTCAAGGTCAAGAGCATCGATGGGGATCTTGTTGGCGTCGTTGGCGATTCATGGTCGCTGAAACTCGACCCTATTTTGATCACCTGGCATTCGAATCGAGGTGTTGGAGAAGAGTCGTATGCTGAAATTGTTTCTGCACTTGTCAAGGATGTTGGGGAGCTGAATTCCAGTGCGATAGCTACAAAATCTTCGTACTTTTATGGAAAATTGATCGCGAGGGCGGCGAGGCTGGCTTTGATTGCAGAGGAGGTGGCTCATCTCGATGTGATTCCGACGATTAGGAAGTTCTTGAAGGAAACGATTGAGCCGTGGCTGGCTGGAACTTTCGGGGGAAATGGTTTCTTGCATGACAAGAAATGGGGTGGCATTGTCACGAAACAAGGAGCAACCGATTCTGGTGCGGATTTTGGGTTTGGACTTTATAGTGGTCACCATTACCATCTGGGGTACTTTGTTTATGGGATTTCAGTGCTTGCGAAAATTGATCCTGCTTGGGGGAGGAAGTATCGGGCTCAAGCTTATTCGCTCACTGCTGATTATTTGACGGTAGGCAGGCATTCAGATTCGCATTATCCACGCATAAGGTGCTTTGATTTTTACAAATTACACTCGTGGAGAAGCGGGTTAAATGAGTCTGCAGATGGTCGTAATCAGGAGAGCACGAGTGAGGCAGTGAATGCCTACTATTCAGCTGCATTGTTGGGCTTAGTTTATGGAGACACCCATCTTGTGGCCACAGGATCAATGCTTGCAGCTTTGGAGATTCGGGCAGCCCAAATGTGGTGGCACGTAAAAGAGGGAAGTAACATGTATGGGCAGGATTTCACAAGGGAAAATCGCTTGGTTGGAATTTTATGGAGTAACAAGAGGGACAGCGCAGTTTGTTTCGCTCCTTCGGAGTGGAAAGAGTGCAGGCTTGGAATTCAGTTGCTACCTCTATTGCCGATCACTGAGGCCTTGTTTTCAGATGTTAGCTTTATTAGGGATCTCGTGACGTGGACACTACCGGCTTTGAGTAGGGAGGGAGTAGGGGAAGGATGGAAAGGATTTGTCTATGCCTTGGAAGGGATTTATGACAAAGAAGGCGCTTTGGGGAAGATAAAGAGCTTGAATGGTCACGATGATGGTAACTCGCTTACGAATCTCTTGTGGTGGATCCACAGCAGAGGAAAGGAAGGAGAGGAAGTCGGACTTGGACATAACGTTTCCTGGTCCGGGCTTTATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

716

Amino Acids

78.59

Weight (kDa)

5.57

Isoelectric Point (pI)

40.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	64 - 333	3.9e-62	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	343 - 692	2.1e-100	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	434
AatII	GACGTC	1 cut(s)	903
AccB7I	CCANNNNNTGG	1 cut(s)	1648
AccI	GTMKAC	1 cut(s)	624
AccII	CGCG	3 cut(s)	483, 888, 1133
AccIII	TCCGGA	2 cut(s)	16, 52
AclI	AACGTT	1 cut(s)	2121
AcoI	YGGCCR	1 cut(s)	1650
AcsI	RAATTY	4 cut(s)	731, 1081, 1767, 1839
AcvI	CACGTG	1 cut(s)	501
AcyI	GRCGYC	2 cut(s)	900, 954
AfaI	GTAC	3 cut(s)	311, 1112, 1367
AfiI	CCNNNNNNNGG	7 cut(s)	751, 776, 1412, 1648, 1698, 1983, 2133
AflIII	ACRYGT	1 cut(s)	1725
AgsI	TTSAA	5 cut(s)	424, 531, 922, 1210, 2029
AjiI	CACGTC	1 cut(s)	1914
AjnI	CCWGG	2 cut(s)	1001, 2126
AjuI	GAANNNNNNNTTGG	4 cut(s)	452, 484, 2094, 2126
Alw21I	GWGCWC	2 cut(s)	506, 1580
Alw26I	GTCTC	1 cut(s)	1629
Aor13HI	TCCGGA	2 cut(s)	16, 52
AoxI	GGCC	2 cut(s)	1650, 1872
ApeKI	GCWGC	5 cut(s)	88, 486, 1610, 1670, 1688
ApoI	RAATTY	4 cut(s)	731, 1081, 1767, 1839
AspLEI	GCGC	2 cut(s)	1796, 2006
AspS9I	GGNCC	1 cut(s)	2130
AsuC2I	CCSGG	3 cut(s)	752, 770, 2134
AsuHPI	GGTGA	7 cut(s)	36, 346, 555, 657, 664, 991, 1340
AsuII	TTCGAA	1 cut(s)	1010
AvaII	GGWCC	1 cut(s)	2130
BalI	TGGCCA	1 cut(s)	1652
BamHI	GGATCC	2 cut(s)	724, 2073
BanII	GRGCYC	1 cut(s)	1432
BauI	CACGAG	4 cut(s)	556, 1528, 1579, 1907
BbrPI	CACGTG	1 cut(s)	501
Bbv12I	GWGCWC	2 cut(s)	506, 1580
BbvCI	CCTCAGC	2 cut(s)	431, 464
BbvI	GCAGC	5 cut(s)	100, 498, 1597, 1682, 1700
BceAI	ACGGC	4 cut(s)	259, 260, 784, 1210
BcgI	CGANNNNNNTGC	4 cut(s)	995, 1029, 1298, 1332
BciT130I	CCWGG	2 cut(s)	1003, 2128
BclI	TGATCA	1 cut(s)	996
BcnI	CCSGG	3 cut(s)	752, 770, 2134
BcoDI	GTCTC	1 cut(s)	1629
BfmI	CTRYAG	1 cut(s)	1554
BfoI	RGCGCY	1 cut(s)	2007
Bme1390I	CCNGG	5 cut(s)	752, 770, 1003, 2128, 2134
Bme18I	GGWCC	1 cut(s)	2130
BmgBI	CACGTC	1 cut(s)	1914
BmgT120I	GGNCC	1 cut(s)	2130
BmiI	GGNNCC	2 cut(s)	726, 2075
BmrFI	CCNGG	5 cut(s)	752, 770, 1003, 2128, 2134
BmsI	GCATC	1 cut(s)	942
BpmI	CTGGAG	1 cut(s)	857
Bpu10I	CCTNAGC	2 cut(s)	431, 464
Bpu14I	TTCGAA	1 cut(s)	1010
BpuEI	CTTGAG	1 cut(s)	1416
BpuMI	CCSGG	3 cut(s)	752, 770, 2134
Bsa29I	ATCGAT	2 cut(s)	642, 936
BsaAI	YACGTR	2 cut(s)	501, 1708
BsaBI	GATNNNNATC	2 cut(s)	723, 942
BsaHI	GRCGYC	2 cut(s)	900, 954
BsaJI	CCNNGG	3 cut(s)	481, 1226, 1977
BsaWI	WCCGGW	3 cut(s)	16, 52, 715
BsaXI	ACNNNNNCTCC	6 cut(s)	161, 191, 398, 428, 2088, 2118
Bsc4I	CCNNNNNNNGG	7 cut(s)	751, 776, 1412, 1648, 1698, 1983, 2133
Bse118I	RCCGGY	1 cut(s)	1924
Bse1I	ACTGG	1 cut(s)	1086
Bse8I	GATNNNNATC	2 cut(s)	723, 942
BseAI	TCCGGA	2 cut(s)	16, 52
BseBI	CCWGG	2 cut(s)	1003, 2128
BseCI	ATCGAT	2 cut(s)	642, 936
BseDI	CCNNGG	3 cut(s)	481, 1226, 1977
BseGI	GGATG	6 cut(s)	194, 261, 540, 859, 1072, 1961
BseJI	GATNNNNATC	2 cut(s)	723, 942
BseLI	CCNNNNNNNGG	7 cut(s)	751, 776, 1412, 1648, 1698, 1983, 2133
BseMII	CTCAG	5 cut(s)	112, 445, 478, 613, 1860
BseNI	ACTGG	1 cut(s)	1086
BseRI	GAGGAG	5 cut(s)	179, 277, 313, 406, 1178
BseXI	GCAGC	5 cut(s)	100, 498, 1597, 1682, 1700
BsgI	GTGCAG	3 cut(s)	851, 1038, 1849
Bsh1236I	CGCG	3 cut(s)	483, 888, 1133
Bsh1285I	CGRYCG	1 cut(s)	642
BshFI	GGCC	2 cut(s)	1652, 1874
BshVI	ATCGAT	2 cut(s)	642, 936
BsiEI	CGRYCG	1 cut(s)	642
BsiHKAI	GWGCWC	2 cut(s)	506, 1580
BsiSI	CCGG	7 cut(s)	17, 53, 716, 752, 770, 1925, 2133
BslFI	GGGAC	1 cut(s)	1802
BslI	CCNNNNNNNGG	7 cut(s)	751, 776, 1412, 1648, 1698, 1983, 2133
BsmAI	GTCTC	1 cut(s)	1629
BsmFI	GGGAC	1 cut(s)	1802
BsmI	GAATGC	3 cut(s)	1006, 1474, 1600
BsnI	GGCC	2 cut(s)	1652, 1874
Bsp119I	TTCGAA	1 cut(s)	1010
Bsp1286I	GDGCHC	3 cut(s)	506, 1432, 1580
Bsp13I	TCCGGA	2 cut(s)	16, 52
Bsp68I	TCGCGA	1 cut(s)	1133
BspANI	GGCC	2 cut(s)	1652, 1874
BspCNI	CTCAG	5 cut(s)	111, 444, 477, 612, 1861
BspDI	ATCGAT	2 cut(s)	642, 936
BspEI	TCCGGA	2 cut(s)	16, 52
BspFNI	CGCG	3 cut(s)	483, 888, 1133
BspLI	GGNNCC	2 cut(s)	726, 2075
BspMAI	CTGCAG	1 cut(s)	1558
BspT104I	TTCGAA	1 cut(s)	1010
BsrFI	RCCGGY	1 cut(s)	1924
BsrI	ACTGG	1 cut(s)	1086
BssAI	RCCGGY	1 cut(s)	1924
BssECI	CCNNGG	3 cut(s)	481, 1226, 1977
BssNAI	GTATAC	1 cut(s)	625
BssNI	GRCGYC	2 cut(s)	900, 954
BssSI	CACGAG	4 cut(s)	556, 1528, 1579, 1907
BssT1I	CCWWGG	1 cut(s)	1977
Bst1107I	GTATAC	1 cut(s)	625
Bst2BI	CACGAG	4 cut(s)	556, 1528, 1579, 1907
Bst2UI	CCWGG	2 cut(s)	1003, 2128
Bst4CI	ACNGT	3 cut(s)	151, 907, 1465
Bst6I	CTCTTC	3 cut(s)	134, 460, 1023
BstACI	GRCGYC	2 cut(s)	900, 954
BstAPI	GCANNNNNTGC	2 cut(s)	1503, 1595
BstBAI	YACGTR	2 cut(s)	501, 1708
BstBI	TTCGAA	1 cut(s)	1010
BstC8I	GCNNGC	7 cut(s)	855, 1149, 1233, 1392, 1472, 1668, 1832
BstDEI	CTNAG	6 cut(s)	98, 431, 464, 599, 1624, 1869
BstDSI	CCRYGG	2 cut(s)	481, 1226
BstEII	GGTNACC	1 cut(s)	1346
BstF5I	GGATG	6 cut(s)	194, 261, 540, 859, 1072, 1961
BstFNI	CGCG	3 cut(s)	483, 888, 1133
BstH2I	RGCGCY	1 cut(s)	2007
BstHHI	GCGC	2 cut(s)	1796, 2006
BstMAI	GTCTC	1 cut(s)	1629
BstMCI	CGRYCG	1 cut(s)	642
BstMWI	GCNNNNNNNGC	9 cut(s)	365, 374, 874, 960, 1139, 1148, 1157, 1503, 1595
BstNI	CCWGG	2 cut(s)	1003, 2128
BstNSI	RCATGY	1 cut(s)	1729
BstPI	GGTNACC	1 cut(s)	1346
BstSCI	CCNGG	5 cut(s)	750, 768, 1001, 2126, 2132
BstSFI	CTRYAG	1 cut(s)	1554
BstUI	CGCG	3 cut(s)	483, 888, 1133
BstV1I	GCAGC	5 cut(s)	100, 498, 1597, 1682, 1700
BstX2I	RGATCY	4 cut(s)	724, 943, 1903, 2073
BstYI	RGATCY	4 cut(s)	724, 943, 1903, 2073
BstZ17I	GTATAC	1 cut(s)	625
Bsu15I	ATCGAT	2 cut(s)	642, 936
BsuRI	GGCC	2 cut(s)	1652, 1874
BsuTUI	ATCGAT	2 cut(s)	642, 936
BtgI	CCRYGG	2 cut(s)	481, 1226
BtrI	CACGTC	1 cut(s)	1914
BtsCI	GGATG	6 cut(s)	194, 261, 540, 859, 1072, 1961
BtsI	GCAGTG	2 cut(s)	1446, 1596
BtsIMutI	CAGTG	6 cut(s)	903, 1093, 1392, 1446, 1596, 1866
BtuMI	TCGCGA	1 cut(s)	1133
Cac8I	GCNNGC	7 cut(s)	855, 1149, 1233, 1392, 1472, 1668, 1832
CfoI	GCGC	2 cut(s)	1796, 2006
Cfr10I	RCCGGY	1 cut(s)	1924
Cfr13I	GGNCC	1 cut(s)	2130
Cfr42I	CCGCGG	1 cut(s)	484
ClaI	ATCGAT	2 cut(s)	642, 936
CseI	GACGC	2 cut(s)	424, 943
Csp6I	GTAC	3 cut(s)	310, 1111, 1366
CspCI	CAANNNNNGTGG	2 cut(s)	1682, 1717
CviAII	CATG	5 cut(s)	615, 850, 969, 1265, 1726
CviQI	GTAC	3 cut(s)	310, 1111, 1366
DdeI	CTNAG	6 cut(s)	98, 431, 464, 599, 1624, 1869
DrdI	GACNNNNNNGTC	1 cut(s)	434
DseDI	GACNNNNNNGTC	1 cut(s)	434
EaeI	YGGCCR	1 cut(s)	1650
Eam1104I	CTCTTC	3 cut(s)	134, 460, 1023
EarI	CTCTTC	3 cut(s)	134, 460, 1023
EciI	GGCGGA	3 cut(s)	280, 322, 364
Eco130I	CCWWGG	1 cut(s)	1977
Eco147I	AGGCCT	1 cut(s)	1874
Eco24I	GRGCYC	1 cut(s)	1432
Eco47I	GGWCC	1 cut(s)	2130
Eco72I	CACGTG	1 cut(s)	501
Eco91I	GGTNACC	1 cut(s)	1346
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRI	GAATTC	2 cut(s)	1081, 1839
EcoRII	CCWGG	2 cut(s)	1001, 2126
EcoT14I	CCWWGG	1 cut(s)	1977
EcoT38I	GRGCYC	1 cut(s)	1432
ErhI	CCWWGG	1 cut(s)	1977
FaeI	CATG	5 cut(s)	618, 853, 972, 1268, 1729
FalI	AAGNNNNNCTT	2 cut(s)	2094, 2126
FaqI	GGGAC	1 cut(s)	1802
FatI	CATG	5 cut(s)	614, 849, 968, 1264, 1725
FauI	CCCGC	2 cut(s)	893, 1532
FbaI	TGATCA	1 cut(s)	996
FblI	GTMKAC	1 cut(s)	624
FokI	GGATG	6 cut(s)	181, 248, 527, 846, 1079, 1968
FriOI	GRGCYC	1 cut(s)	1432
GlaI	GCGC	2 cut(s)	1795, 2005
GsuI	CTGGAG	1 cut(s)	857
HaeII	RGCGCY	1 cut(s)	2007
HaeIII	GGCC	2 cut(s)	1652, 1874
HapII	CCGG	7 cut(s)	17, 53, 716, 752, 770, 1925, 2133
HgaI	GACGC	2 cut(s)	424, 943
HhaI	GCGC	2 cut(s)	1796, 2006
Hin1I	GRCGYC	2 cut(s)	900, 954
Hin1II	CATG	5 cut(s)	618, 853, 972, 1268, 1729
Hin6I	GCGC	2 cut(s)	1794, 2004
HinP1I	GCGC	2 cut(s)	1794, 2004
HindIII	AAGCTT	1 cut(s)	1434
HpaII	CCGG	7 cut(s)	17, 53, 716, 752, 770, 1925, 2133
HphI	GGTGA	7 cut(s)	36, 346, 555, 657, 664, 991, 1340
Hpy166II	GTNNAC	3 cut(s)	563, 625, 1917
Hpy8I	GTNNAC	3 cut(s)	563, 625, 1917
Hpy99I	CGWCG	2 cut(s)	959, 1195
HpyAV	CCTTC	9 cut(s)	226, 346, 430, 1204, 1821, 1946, 1976, 1994, 2087
HpyCH4III	ACNGT	3 cut(s)	151, 907, 1465
HpyCH4IV	ACGT	5 cut(s)	500, 900, 1707, 1913, 2121
HpyCH4V	TGCA	8 cut(s)	868, 1055, 1160, 1264, 1556, 1613, 1670, 1830
HpyF10VI	GCNNNNNNNGC	9 cut(s)	365, 374, 874, 960, 1139, 1148, 1157, 1503, 1595
HpyF3I	CTNAG	6 cut(s)	98, 431, 464, 599, 1624, 1869
HpySE526I	ACGT	5 cut(s)	500, 900, 1707, 1913, 2121
Hsp92I	GRCGYC	2 cut(s)	900, 954
Hsp92II	CATG	5 cut(s)	618, 853, 972, 1268, 1729
HspAI	GCGC	2 cut(s)	1794, 2004
Kpn2I	TCCGGA	2 cut(s)	16, 52
Ksp22I	TGATCA	1 cut(s)	996
KspI	CCGCGG	1 cut(s)	484
LmnI	GCTCC	3 cut(s)	1075, 1301, 1813
Lsp1109I	GCAGC	5 cut(s)	100, 498, 1597, 1682, 1700
LweI	GCATC	1 cut(s)	942
MaeII	ACGT	5 cut(s)	500, 900, 1707, 1913, 2121
MflI	RGATCY	4 cut(s)	724, 943, 1903, 2073
MhlI	GDGCHC	3 cut(s)	506, 1432, 1580
MlsI	TGGCCA	1 cut(s)	1652
MluCI	AATT	8 cut(s)	731, 1044, 1081, 1124, 1398, 1520, 1767, 1839
MluNI	TGGCCA	1 cut(s)	1652
MlyI	GAGTC	4 cut(s)	221, 566, 1040, 1559
MmeI	TCCRAC	6 cut(s)	483, 537, 1003, 1214, 1744, 2086
Mox20I	TGGCCA	1 cut(s)	1652
MroI	TCCGGA	2 cut(s)	16, 52
MscI	TGGCCA	1 cut(s)	1652
MseI	TTAA	2 cut(s)	1544, 2146
MslI	CAYNNNNRTG	2 cut(s)	1179, 2040
Msp20I	TGGCCA	1 cut(s)	1652
MspA1I	CMGCKG	2 cut(s)	483, 1610
MspI	CCGG	7 cut(s)	17, 53, 716, 752, 770, 1925, 2133
MspR9I	CCNGG	5 cut(s)	752, 770, 1003, 2128, 2134
Mva1269I	GAATGC	3 cut(s)	1006, 1474, 1600
MvaI	CCWGG	2 cut(s)	1003, 2128
MvnI	CGCG	3 cut(s)	483, 888, 1133
MwoI	GCNNNNNNNGC	9 cut(s)	365, 374, 874, 960, 1139, 1148, 1157, 1503, 1595
NciI	CCSGG	3 cut(s)	752, 770, 2134
NlaIII	CATG	5 cut(s)	618, 853, 972, 1268, 1729
NlaIV	GGNNCC	2 cut(s)	726, 2075
NmuCI	GTSAC	9 cut(s)	42, 75, 436, 663, 901, 1288, 1346, 1909, 2033
NruI	TCGCGA	1 cut(s)	1133
NspI	RCATGY	1 cut(s)	1729
NspV	TTCGAA	1 cut(s)	1010
PceI	AGGCCT	1 cut(s)	1874
PciI	ACATGT	1 cut(s)	1725
PcsI	WCGNNNNNNNCGW	2 cut(s)	432, 1223
PctI	GAATGC	3 cut(s)	1006, 1474, 1600
PflFI	GACNNNGTC	1 cut(s)	752
PflMI	CCANNNNNTGG	1 cut(s)	1648
Ple19I	CGATCG	1 cut(s)	642
PleI	GAGTC	4 cut(s)	220, 566, 1039, 1558
PmaCI	CACGTG	1 cut(s)	501
PmlI	CACGTG	1 cut(s)	501
PpsI	GAGTC	4 cut(s)	220, 566, 1039, 1558
Ppu21I	YACGTR	2 cut(s)	501, 1708
PscI	ACATGT	1 cut(s)	1725
Psp1406I	AACGTT	1 cut(s)	2121
Psp6I	CCWGG	2 cut(s)	1001, 2126
PspCI	CACGTG	1 cut(s)	501
PspEI	GGTNACC	1 cut(s)	1346
PspGI	CCWGG	2 cut(s)	1001, 2126
PspN4I	GGNNCC	2 cut(s)	726, 2075
PspPI	GGNCC	1 cut(s)	2130
PstI	CTGCAG	1 cut(s)	1558
PsuI	RGATCY	4 cut(s)	724, 943, 1903, 2073
PsyI	GACNNNGTC	1 cut(s)	752
PvuI	CGATCG	1 cut(s)	642
PvuII	CAGCTG	1 cut(s)	1610
RruI	TCGCGA	1 cut(s)	1133
RsaI	GTAC	3 cut(s)	311, 1112, 1367
RsaNI	GTAC	3 cut(s)	310, 1111, 1366
RseI	CAYNNNNRTG	2 cut(s)	1179, 2040
SacII	CCGCGG	1 cut(s)	484
SaqAI	TTAA	2 cut(s)	1544, 2146
Sau96I	GGNCC	1 cut(s)	2130
SchI	GAGTC	4 cut(s)	221, 566, 1040, 1559
ScrFI	CCNGG	5 cut(s)	752, 770, 1003, 2128, 2134
SduI	GDGCHC	3 cut(s)	506, 1432, 1580
SfaNI	GCATC	1 cut(s)	942
SfcI	CTRYAG	1 cut(s)	1554
Sfr303I	CCGCGG	1 cut(s)	484
SfuI	TTCGAA	1 cut(s)	1010
SgrBI	CCGCGG	1 cut(s)	484
SinI	GGWCC	1 cut(s)	2130
SmiMI	CAYNNNNRTG	2 cut(s)	1179, 2040
SmlI	CTYRAG	1 cut(s)	1431
SmoI	CTYRAG	1 cut(s)	1431
Sse9I	AATT	8 cut(s)	731, 1044, 1081, 1124, 1398, 1520, 1767, 1839
SseBI	AGGCCT	1 cut(s)	1874
StuI	AGGCCT	1 cut(s)	1874
StyD4I	CCNGG	5 cut(s)	750, 768, 1001, 2126, 2132
StyI	CCWWGG	1 cut(s)	1977
TaaI	ACNGT	3 cut(s)	151, 907, 1465
TaiI	ACGT	5 cut(s)	503, 903, 1710, 1916, 2124
TaqI	TCGA	7 cut(s)	642, 735, 936, 984, 1010, 1015, 1179
TasI	AATT	8 cut(s)	731, 1044, 1081, 1124, 1398, 1520, 1767, 1839
TauI	GCSGC	5 cut(s)	116, 119, 296, 486, 1142
Tru1I	TTAA	2 cut(s)	1544, 2146
Tru9I	TTAA	2 cut(s)	1544, 2146
TscAI	CASTG	6 cut(s)	910, 1093, 1392, 1453, 1596, 1873
TseFI	GTSAC	9 cut(s)	42, 75, 436, 663, 901, 1288, 1346, 1909, 2033
TseI	GCWGC	5 cut(s)	88, 486, 1610, 1670, 1688
Tsp45I	GTSAC	9 cut(s)	42, 75, 436, 663, 901, 1288, 1346, 1909, 2033
TspDTI	ATGAA	2 cut(s)	484, 957
TspRI	CASTG	6 cut(s)	910, 1093, 1392, 1453, 1596, 1873
Tth111I	GACNNNGTC	1 cut(s)	752
Van91I	CCANNNNNTGG	1 cut(s)	1648
VpaK11BI	GGWCC	1 cut(s)	2130
XapI	RAATTY	4 cut(s)	731, 1081, 1767, 1839
XceI	RCATGY	1 cut(s)	1729
XmiI	GTMKAC	1 cut(s)	624
ZraI	GACGTC	1 cut(s)	901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.