Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000403

Physical Location & Seq

Genomic Coordinates Forward (+)

5744057 .. 5746255

Gene Structure 2199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1081400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGTTGAAAAAAGTGAAAAGGAAAGTCAAAACCTTGGTAAAACCCAAGAAAAATCCCTATAAACCACCACCCCCTCCATCTTCATTTCCATCATTACCACCTCCGGAAGAAGAATCCCAAACCATGTCGCCACCGACGCAACAAACTTTCCGGCCACCCGCCACCGCTGACCCATTCCTCTTTCCCCAAACCCAATCCACCGTCCTCCCCGACCCGTCAAACTTCTTCTCCCCAAACCTCCTCTCATCCCCTCTCCCCACCAACTCTTTCTTCCAAAATTTCGTCCTTAAAAACGGCGACCAACCCGAATACTTCCACCCCTACGCCGTCAAATCCTCCTCCGCCGCCCTAACCATCTCGTACCCATCTCGCTTCTCCACCTCCGCCTTCATATACCAAATCTTCATCGCCGATCTCACCATCTCCGCCGCTCAAAACCCCGGTTCCCCACAACCCCACAAAATCTCCTCCTTCAACGACCTCAGCGTCACATTGGATTTCCCCTCCTCCAACCTCAGCTTCTTCCTCGTCCGCGGCAGCCCATTCATCACCTGCTCTGTTTCCAACTCGACCTCTCTTTCAATCTCCACCATCCACGCAATCCTCTCGTGTTCATCAAACGGCTCAAAGACCAAATACACCATCAAGCTCAATAGCAATCAGACATGGCTTGTATACACTTCTTCCCCGATCGATTTGACAACCAGCGGCCTGTCACTGATCACCTCCAATGGGTTTTCTGGTATTGTTCGGATTGCGATATTGCCCAATTCGGATCCGAAATTTGAGGCGATCCTCGACCGGTTCAGCTCTTGCTACCCGGTTTCCGGCGAAGCGGTTTTCACTAAGCCGTTTGCTTTGGAGTACAAATGGGAGAAAAAAGGATGGGGCGAATTGCTCATGCTTGCTCATCCTCTGCACCTCCAGCTTCTCTCCAGCGAGGATTCTGACGTCACCGTTTTGGAGGATTTCAAGTTCAAGAGCATTGATGGGGATCTTGTTGGCGTTGTTGGCGATTCGTGGGCGCTGAAACCCGACCCTGTTTCGATCACCTGGCATTCGAGTCGAGGTGTTGGAGAAGATTCGTATGCTGAAGTTGTTTCTGCACTAGTTAAGGATGTAGGGGAGCTGAATTCGAGTGGGATAGCTACAACATCTTCGTACTTTTATGGAAAATTGATAGCAAGGGCGGCAAGGCTGGCTTTGATCGCAGAGGAGGTGGATTATCTCGATGTGATTCCGACGATTAGGAAGTTCCTGAAGGAAACGATTGAGCCGTGGCTGGTTGGAACTTTCGGGGGGAATGGTTTCTTGTATGACAAGAAATGGGGTGGCATTGTCACGAAACAAGGAGCAACCGATTCTGGTGCAGATTTTGGGTTTGGAATTTATAATGATCACCATTATCATCTGGGGTACTTTGTTTATGGGATTTCAGTGCTTGTGAAAATTGATCCTGCTTGGGGGAGGAAGTATCGGGCTCAAGCTTATTCGCTTGCTGCTGATTATTTGACGGTAGGCAGGCGATCACATTCGCATTATCCACGCTTACGGTGCTTTGATTTTTACAAATTACACTCGTGGGCAGGCGGGTTAACTGAGTTTGCAGATGGTCGTAATCAGGAGAGCACGAGTGAGGCAGTGAATGCCTACTATTCAGCTGCATTGTTGGGCTTAGCTTATGGAGACACCCATCTTGTGGCCACAGGATCAATTCTTGCAGCTTTGGAGATTCGGGCAGCGCAAATGTGGTGGCACGTAAAAGAGGGGGGTAACATGTATGAGGAGGATTTCACAAGGGAAAATCGTTTGGTTGGAGTTTTATGGAATAACAAGAGGGACAGCGGACTTTGGTTCGCTCCTCCGGAGTGGAAAGAGTGCAGGCTTGGAATTCAGTTGCTACCGCTATTGCCGATCACTGAGGCCTTGTTTTCAGATGTTGGCTTTGTTAGGGATCTTGTGAAGTGGACACTACCGGCTTTGAGTAGGGAGGGAGTAGGAGAAGGATGGAAAGGATTTGTCTATTCCTTGGAAGGGATTTATGACAAAGAAGGCGCTTTGGGGAAGATAAGGAACTTGAATGGTTACGATGATGGTAACTCGCTTACGAATCTTTTGTGGTGGATCCACAGCAGAGGAGAGGAAGCAGCGGAATTCGGACTTGGACATAACATTTGCTGGTCTAGGCACTATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0000746 GO:0000747 GO:0000920 GO:0000935 GO:0000936 GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005937 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006076 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0009986 GO:0009987 GO:0010383 GO:0015629 GO:0015926 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016998 GO:0019953 GO:0022411 GO:0022414 GO:0030246 GO:0030247 GO:0030427 GO:0030428 GO:0030994 GO:0031505 GO:0032153 GO:0032155 GO:0042973 GO:0042995 GO:0043170 GO:0043187 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043332 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044277 GO:0044347 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044457 GO:0044463 GO:0044464 GO:0044703 GO:0044764 GO:0045229 GO:0051273 GO:0051275 GO:0051286 GO:0051301 GO:0051704 GO:0070871 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071852 GO:0071853 GO:0120025 GO:0120038 GO:1901575 GO:1904541 GO:1990819

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_81

Protein Analysis

733

Amino Acids

81.23

Weight (kDa)

6.43

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	81 - 351	5.2e-67	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	360 - 709	1.1e-103	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18310 AT5G15870
fragaria_vesca	FvH4_3g44967 FvH4_6g45580 FvH4_6g47860 FvH4_6g47870 FvH4_6g53160
malus_domestica	MD09G1047100.v1.1 MD09G1081400.v1.1 MD09G1081500.v1.1 MD09G1081600.v1.1 MD09G1081700.v1.1 MD15G1128600.v1.1 MD17G1047200.v1.1 MD17G1048700.v1.1 MD17G1071200.v1.1 MD17G1072700.v1.1
prunus_persica	Prupe.3G242000_v2.0.a1 Prupe.3G242100_v2.0.a1 Prupe.3G261700_v2.0.a1 Prupe.8G191700_v2.0.a1 Prupe.8G194600_v2.0.a1 Prupe.8G259500_v2.0.a1
pyrus_communis	pycom09g00810 pycom09g00820 pycom09g00830 pycom15g11570 pycom17g04350 pycom17g07070 pycom17g07350
rosa_chinensis	RchiOBHm_Chr1g0366281 RchiOBHm_Chr2g0163531 RchiOBHm_Chr2g0163581 RchiOBHm_Chr2g0167061 RchiOBHm_Chr2g0167071 RchiOBHm_Chr3g0490821 RchiOBHm_Chr3g0490841 RchiOBHm_Chr3g0492161 RchiOBHm_Chr3g0492171
rosa_laevigata	RLG00000021408 RLG00000021693 RLG00000021694 RLG00000022819 RLG00000022827
rosa_multiflora	Rmu_co8304887.1_g000001 Rmu_co8334235.1_g000001 Rmu_co8488335.1_g000001 Rmu_sc0003484.1_g000001 Rmu_sc0003484.1_g000004 Rmu_sc0010966.1_g000013 Rmu_sc0012462.1_g000001 Rmu_sc0019504.1_g000002 Rmu_sc0019504.1_g000004 Rmu_sc0022540.1_g000001 Rmu_sc0023760.1_g000001 Rmu_sc0038280.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077500 Rroxscaffold_2G00083750 Rroxscaffold_2G00083760 Rroxscaffold_2G00087160 Rroxscaffold_2G00132530 Rroxscaffold_4G00290030 Rroxscaffold_4G00290040 Rroxscaffold_4G00290280
rosa_rugosa	Rorug01G0328400 Rorug02G0265200 Rorug02G0265900 Rorug02G0266000 Rorug02G0266800.1 Rorug02G0266900.1 Rorug02G0267500 Rorug02G0267600 Rorug02G0268300 Rorug02G0268800 Rorug02G0268900 Rorug02G0503600 Rorug02G0528200 Rorug02G0528300 Rorug03G0247200 Rorug03G0247300
rosa_samantha	Rh1BG298400 Rh1DG329800 Rh2AG570500 Rh2AG570700 Rh2AG595000 Rh2AG595100 Rh2AG595200 Rh2CG552500 Rh2CG552700 Rh2CG577100 Rh2CG577200 Rh2DG592500 Rh2DG617800 Rh2DG617900 Rh3CG333000 Rh3DG335000
rosa_wichuraiana	Rw2G047230 Rw2G049530 Rw2G049540 Rw3G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1392
AarI	CACCTGC	1 cut(s)	560
AasI	GACNNNNNNGTC	1 cut(s)	485
AatII	GACGTC	1 cut(s)	954
Acc36I	ACCTGC	1 cut(s)	560
AccB7I	CCANNNNNTGG	1 cut(s)	1699
AccBSI	CCGCTC	1 cut(s)	431
AccI	GTMKAC	1 cut(s)	675
AccII	CGCG	1 cut(s)	534
AccIII	TCCGGA	2 cut(s)	103, 1864
AclWI	GGATC	9 cut(s)	770, 783, 787, 1002, 1448, 1717, 1962, 2119, 2132
AcoI	YGGCCR	2 cut(s)	152, 1701
AcsI	RAATTY	6 cut(s)	277, 782, 1132, 1386, 1890, 2153
AcuI	CTGAAG	2 cut(s)	1113, 1280
AcyI	GRCGYC	1 cut(s)	951
AfaI	GTAC	4 cut(s)	362, 866, 1163, 1418
AfiI	CCNNNNNNNGG	5 cut(s)	732, 827, 1463, 1699, 2034
AflIII	ACRYGT	1 cut(s)	1776
AgeI	ACCGGT	1 cut(s)	801
AgsI	TTSAA	6 cut(s)	7, 475, 582, 973, 979, 2080
AhlI	ACTAGT	1 cut(s)	1108
AjnI	CCWGG	1 cut(s)	1052
AjuI	GAANNNNNNNTTGG	6 cut(s)	254, 286, 503, 535, 2145, 2177
AloI	GAACNNNNNNTCC	2 cut(s)	959, 991
Alw21I	GWGCWC	1 cut(s)	1631
Alw26I	GTCTC	1 cut(s)	1680
AlwI	GGATC	9 cut(s)	770, 783, 787, 1002, 1448, 1717, 1962, 2119, 2132
Aor13HI	TCCGGA	2 cut(s)	103, 1864
AoxI	GGCC	4 cut(s)	152, 709, 1701, 1923
ApeKI	GCWGC	6 cut(s)	537, 1499, 1661, 1721, 1739, 2147
ApoI	RAATTY	6 cut(s)	277, 782, 1132, 1386, 1890, 2153
ArsI	GACNNNNNNTTYG	2 cut(s)	2157, 2189
AsiGI	ACCGGT	1 cut(s)	801
Asp700I	GAANNNNTTC	1 cut(s)	1307
AspLEI	GCGC	3 cut(s)	1027, 1744, 2057
AsuC2I	CCSGG	2 cut(s)	441, 821
AsuHPI	GGTGA	6 cut(s)	409, 541, 715, 946, 1042, 1391
BalI	TGGCCA	1 cut(s)	1703
BamHI	GGATCC	2 cut(s)	775, 2124
BanII	GRGCYC	1 cut(s)	1483
BauI	CACGAG	3 cut(s)	607, 1579, 1630
Bbv12I	GWGCWC	1 cut(s)	1631
BbvCI	CCTCAGC	2 cut(s)	482, 515
BbvI	GCAGC	6 cut(s)	549, 1486, 1648, 1733, 1751, 2159
BceAI	ACGGC	5 cut(s)	310, 311, 637, 835, 1261
BcgI	CGANNNNNNTGC	6 cut(s)	588, 622, 1046, 1080, 1349, 1383
BciT130I	CCWGG	1 cut(s)	1054
BclI	TGATCA	2 cut(s)	720, 1396
BcnI	CCSGG	2 cut(s)	441, 821
BcoDI	GTCTC	1 cut(s)	1680
BcuI	ACTAGT	1 cut(s)	1108
BfaI	CTAG	2 cut(s)	1109, 2184
BfoI	RGCGCY	2 cut(s)	1028, 2058
BfuAI	ACCTGC	1 cut(s)	560
BlpI	GCTNAGC	1 cut(s)	1675
Bme1390I	CCNGG	3 cut(s)	441, 821, 1054
BmiI	GGNNCC	3 cut(s)	445, 777, 2126
BmrFI	CCNGG	3 cut(s)	441, 821, 1054
BpmI	CTGGAG	2 cut(s)	908, 919
Bpu10I	CCTNAGC	2 cut(s)	482, 515
Bpu1102I	GCTNAGC	1 cut(s)	1675
BpuEI	CTTGAG	1 cut(s)	1467
BpuMI	CCSGG	2 cut(s)	441, 821
Bsa29I	ATCGAT	1 cut(s)	693
BsaAI	YACGTR	1 cut(s)	1759
BsaBI	GATNNNNATC	1 cut(s)	993
BsaHI	GRCGYC	1 cut(s)	951
BsaJI	CCNNGG	5 cut(s)	33, 439, 532, 1277, 2028
BsaWI	WCCGGW	3 cut(s)	103, 801, 1864
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 449, 479
Bsc4I	CCNNNNNNNGG	5 cut(s)	732, 827, 1463, 1699, 2034
Bse118I	RCCGGY	2 cut(s)	801, 1975
Bse8I	GATNNNNATC	1 cut(s)	993
BseAI	TCCGGA	2 cut(s)	103, 1864
BseBI	CCWGG	1 cut(s)	1054
BseCI	ATCGAT	1 cut(s)	693
BseDI	CCNNGG	5 cut(s)	33, 439, 532, 1277, 2028
BseGI	GGATG	6 cut(s)	245, 591, 890, 910, 1123, 2012
BseJI	GATNNNNATC	1 cut(s)	993
BseLI	CCNNNNNNNGG	5 cut(s)	732, 827, 1463, 1699, 2034
BseMII	CTCAG	4 cut(s)	496, 529, 1590, 1911
BseRI	GAGGAG	8 cut(s)	230, 328, 457, 496, 1229, 1799, 1851, 2151
BseXI	GCAGC	6 cut(s)	549, 1486, 1648, 1733, 1751, 2159
BsgI	GTGCAG	4 cut(s)	902, 1089, 1389, 1900
Bsh1236I	CGCG	1 cut(s)	534
Bsh1285I	CGRYCG	2 cut(s)	693, 802
BshFI	GGCC	4 cut(s)	154, 711, 1703, 1925
BshTI	ACCGGT	1 cut(s)	801
BshVI	ATCGAT	1 cut(s)	693
BsiEI	CGRYCG	2 cut(s)	693, 802
BsiHKAI	GWGCWC	1 cut(s)	1631
BsiSI	CCGG	8 cut(s)	104, 151, 441, 802, 821, 828, 1865, 1976
BslFI	GGGAC	1 cut(s)	1853
BslI	CCNNNNNNNGG	5 cut(s)	732, 827, 1463, 1699, 2034
BsmAI	GTCTC	1 cut(s)	1680
BsmFI	GGGAC	1 cut(s)	1853
BsmI	GAATGC	2 cut(s)	1057, 1651
BsnI	GGCC	4 cut(s)	154, 711, 1703, 1925
Bsp1286I	GDGCHC	2 cut(s)	1483, 1631
Bsp13I	TCCGGA	2 cut(s)	103, 1864
Bsp1720I	GCTNAGC	1 cut(s)	1675
BspANI	GGCC	4 cut(s)	154, 711, 1703, 1925
BspCNI	CTCAG	4 cut(s)	495, 528, 1591, 1912
BspDI	ATCGAT	1 cut(s)	693
BspEI	TCCGGA	2 cut(s)	103, 1864
BspFNI	CGCG	1 cut(s)	534
BspLI	GGNNCC	3 cut(s)	445, 777, 2126
BspMI	ACCTGC	1 cut(s)	560
BspPI	GGATC	9 cut(s)	770, 783, 787, 1002, 1448, 1717, 1962, 2119, 2132
BsrBI	CCGCTC	1 cut(s)	431
BsrFI	RCCGGY	2 cut(s)	801, 1975
BssAI	RCCGGY	2 cut(s)	801, 1975
BssECI	CCNNGG	5 cut(s)	33, 439, 532, 1277, 2028
BssNAI	GTATAC	1 cut(s)	676
BssNI	GRCGYC	1 cut(s)	951
BssSI	CACGAG	3 cut(s)	607, 1579, 1630
BssT1I	CCWWGG	2 cut(s)	33, 2028
Bst1107I	GTATAC	1 cut(s)	676
Bst2BI	CACGAG	3 cut(s)	607, 1579, 1630
Bst2UI	CCWGG	1 cut(s)	1054
Bst4CI	ACNGT	4 cut(s)	202, 958, 1516, 1554
BstACI	GRCGYC	1 cut(s)	951
BstAPI	GCANNNNNTGC	1 cut(s)	1646
BstBAI	YACGTR	1 cut(s)	1759
BstC8I	GCNNGC	6 cut(s)	906, 1200, 1497, 1523, 1588, 1883
BstDEI	CTNAG	6 cut(s)	482, 515, 846, 1599, 1675, 1920
BstDSI	CCRYGG	2 cut(s)	532, 1277
BstF5I	GGATG	6 cut(s)	245, 591, 890, 910, 1123, 2012
BstFNI	CGCG	1 cut(s)	534
BstH2I	RGCGCY	2 cut(s)	1028, 2058
BstHHI	GCGC	3 cut(s)	1027, 1744, 2057
BstMAI	GTCTC	1 cut(s)	1680
BstMCI	CGRYCG	2 cut(s)	693, 802
BstMWI	GCNNNNNNNGC	8 cut(s)	136, 925, 1011, 1190, 1199, 1208, 1554, 1646
BstNI	CCWGG	1 cut(s)	1054
BstNSI	RCATGY	1 cut(s)	1780
BstSCI	CCNGG	3 cut(s)	439, 819, 1052
BstUI	CGCG	1 cut(s)	534
BstV1I	GCAGC	6 cut(s)	549, 1486, 1648, 1733, 1751, 2159
BstX2I	RGATCY	4 cut(s)	775, 994, 1954, 2124
BstYI	RGATCY	4 cut(s)	775, 994, 1954, 2124
BstZ17I	GTATAC	1 cut(s)	676
Bsu15I	ATCGAT	1 cut(s)	693
BsuRI	GGCC	4 cut(s)	154, 711, 1703, 1925
BsuTUI	ATCGAT	1 cut(s)	693
BtgI	CCRYGG	2 cut(s)	532, 1277
BtgZI	GCGATG	1 cut(s)	391
BtsCI	GGATG	6 cut(s)	245, 591, 890, 910, 1123, 2012
BtsI	GCAGTG	1 cut(s)	1647
BtsIMutI	CAGTG	4 cut(s)	716, 1443, 1647, 1917
BveI	ACCTGC	1 cut(s)	560
Cac8I	GCNNGC	6 cut(s)	906, 1200, 1497, 1523, 1588, 1883
CfoI	GCGC	3 cut(s)	1027, 1744, 2057
Cfr10I	RCCGGY	2 cut(s)	801, 1975
Cfr42I	CCGCGG	1 cut(s)	535
ClaI	ATCGAT	1 cut(s)	693
CseI	GACGC	2 cut(s)	145, 475
Csp6I	GTAC	4 cut(s)	361, 865, 1162, 1417
CspAI	ACCGGT	1 cut(s)	801
CspCI	CAANNNNNGTGG	2 cut(s)	1733, 1768
CviAII	CATG	4 cut(s)	124, 666, 901, 1777
CviQI	GTAC	4 cut(s)	361, 865, 1162, 1417
DdeI	CTNAG	6 cut(s)	482, 515, 846, 1599, 1675, 1920
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
EaeI	YGGCCR	2 cut(s)	152, 1701
EciI	GGCGGA	3 cut(s)	331, 373, 415
Eco130I	CCWWGG	2 cut(s)	33, 2028
Eco147I	AGGCCT	1 cut(s)	1925
Eco24I	GRGCYC	1 cut(s)	1483
Eco57I	CTGAAG	2 cut(s)	1113, 1280
EcoRI	GAATTC	3 cut(s)	1132, 1890, 2153
EcoRII	CCWGG	1 cut(s)	1052
EcoT14I	CCWWGG	2 cut(s)	33, 2028
EcoT38I	GRGCYC	1 cut(s)	1483
ErhI	CCWWGG	2 cut(s)	33, 2028
FaeI	CATG	4 cut(s)	127, 669, 904, 1780
FalI	AAGNNNNNCTT	2 cut(s)	1186, 1218
FaqI	GGGAC	1 cut(s)	1853
FatI	CATG	4 cut(s)	123, 665, 900, 1776
FauI	CCCGC	2 cut(s)	166, 1583
FbaI	TGATCA	2 cut(s)	720, 1396
FblI	GTMKAC	1 cut(s)	675
FokI	GGATG	6 cut(s)	232, 578, 897, 897, 1130, 2019
FriOI	GRGCYC	1 cut(s)	1483
FspBI	CTAG	2 cut(s)	1109, 2184
GlaI	GCGC	3 cut(s)	1026, 1743, 2056
GsuI	CTGGAG	2 cut(s)	908, 919
HaeII	RGCGCY	2 cut(s)	1028, 2058
HaeIII	GGCC	4 cut(s)	154, 711, 1703, 1925
HapII	CCGG	8 cut(s)	104, 151, 441, 802, 821, 828, 1865, 1976
HgaI	GACGC	2 cut(s)	145, 475
HhaI	GCGC	3 cut(s)	1027, 1744, 2057
Hin1I	GRCGYC	1 cut(s)	951
Hin1II	CATG	4 cut(s)	127, 669, 904, 1780
Hin6I	GCGC	3 cut(s)	1025, 1742, 2055
HinP1I	GCGC	3 cut(s)	1025, 1742, 2055
HincII	GTYRAC	1 cut(s)	1596
HindII	GTYRAC	1 cut(s)	1596
HindIII	AAGCTT	1 cut(s)	1485
HinfI	GANTC	9 cut(s)	113, 944, 1016, 1063, 1082, 1237, 1361, 1732, 2110
HpaI	GTTAAC	1 cut(s)	1596
HpaII	CCGG	8 cut(s)	104, 151, 441, 802, 821, 828, 1865, 1976
HphI	GGTGA	6 cut(s)	409, 541, 715, 946, 1042, 1391
Hpy166II	GTNNAC	3 cut(s)	676, 1596, 1968
Hpy188I	TCNGA	8 cut(s)	663, 753, 775, 780, 949, 1242, 1936, 2159
Hpy188III	TCNNGA	7 cut(s)	104, 979, 1229, 1258, 1342, 1622, 1865
Hpy8I	GTNNAC	3 cut(s)	676, 1596, 1968
Hpy99I	CGWCG	2 cut(s)	139, 1246
HpyAV	CCTTC	6 cut(s)	397, 481, 1255, 1997, 2027, 2045
HpyCH4III	ACNGT	4 cut(s)	202, 958, 1516, 1554
HpyCH4IV	ACGT	2 cut(s)	951, 1758
HpyCH4V	TGCA	7 cut(s)	919, 1106, 1370, 1607, 1664, 1721, 1881
HpyF10VI	GCNNNNNNNGC	8 cut(s)	136, 925, 1011, 1190, 1199, 1208, 1554, 1646
HpyF3I	CTNAG	6 cut(s)	482, 515, 846, 1599, 1675, 1920
HpySE526I	ACGT	2 cut(s)	951, 1758
Hsp92I	GRCGYC	1 cut(s)	951
Hsp92II	CATG	4 cut(s)	127, 669, 904, 1780
HspAI	GCGC	3 cut(s)	1025, 1742, 2055
Kpn2I	TCCGGA	2 cut(s)	103, 1864
Ksp22I	TGATCA	2 cut(s)	720, 1396
KspAI	GTTAAC	1 cut(s)	1596
KspI	CCGCGG	1 cut(s)	535
LmnI	GCTCC	3 cut(s)	1126, 1352, 1864
Lsp1109I	GCAGC	6 cut(s)	549, 1486, 1648, 1733, 1751, 2159
MaeI	CTAG	2 cut(s)	1109, 2184
MaeII	ACGT	2 cut(s)	951, 1758
MaeIII	GTNAC	7 cut(s)	487, 714, 952, 1339, 1772, 2084, 2096
MbiI	CCGCTC	1 cut(s)	431
MflI	RGATCY	4 cut(s)	775, 994, 1954, 2124
MhlI	GDGCHC	2 cut(s)	1483, 1631
MlsI	TGGCCA	1 cut(s)	1703
MluNI	TGGCCA	1 cut(s)	1703
MlyI	GAGTC	1 cut(s)	1072
MmeI	TCCRAC	6 cut(s)	534, 588, 1054, 1265, 1267, 1795
Mox20I	TGGCCA	1 cut(s)	1703
MroI	TCCGGA	2 cut(s)	103, 1864
MroXI	GAANNNNTTC	1 cut(s)	1307
MscI	TGGCCA	1 cut(s)	1703
MseI	TTAA	4 cut(s)	288, 1113, 1595, 2197
Msp20I	TGGCCA	1 cut(s)	1703
MspA1I	CMGCKG	6 cut(s)	167, 534, 708, 1661, 1845, 2150
MspI	CCGG	8 cut(s)	104, 151, 441, 802, 821, 828, 1865, 1976
MspR9I	CCNGG	3 cut(s)	441, 821, 1054
Mva1269I	GAATGC	2 cut(s)	1057, 1651
MvaI	CCWGG	1 cut(s)	1054
MvnI	CGCG	1 cut(s)	534
MwoI	GCNNNNNNNGC	8 cut(s)	136, 925, 1011, 1190, 1199, 1208, 1554, 1646
NciI	CCSGG	2 cut(s)	441, 821
NlaIII	CATG	4 cut(s)	127, 669, 904, 1780
NlaIV	GGNNCC	3 cut(s)	445, 777, 2126
NmuCI	GTSAC	4 cut(s)	487, 714, 952, 1339
NspI	RCATGY	1 cut(s)	1780
PaqCI	CACCTGC	1 cut(s)	560
PceI	AGGCCT	1 cut(s)	1925
PciI	ACATGT	1 cut(s)	1776
PcsI	WCGNNNNNNNCGW	2 cut(s)	483, 1274
PctI	GAATGC	2 cut(s)	1057, 1651
PdmI	GAANNNNTTC	1 cut(s)	1307
PfeI	GAWTC	8 cut(s)	113, 944, 1016, 1082, 1237, 1361, 1732, 2110
PflMI	CCANNNNNTGG	1 cut(s)	1699
PinAI	ACCGGT	1 cut(s)	801
Ple19I	CGATCG	1 cut(s)	693
PleI	GAGTC	1 cut(s)	1071
PpsI	GAGTC	1 cut(s)	1071
Ppu21I	YACGTR	1 cut(s)	1759
PscI	ACATGT	1 cut(s)	1776
PsiI	TTATAA	1 cut(s)	1392
Psp6I	CCWGG	1 cut(s)	1052
PspGI	CCWGG	1 cut(s)	1052
PspN4I	GGNNCC	3 cut(s)	445, 777, 2126
PsuI	RGATCY	4 cut(s)	775, 994, 1954, 2124
PvuI	CGATCG	1 cut(s)	693
PvuII	CAGCTG	1 cut(s)	1661
RsaI	GTAC	4 cut(s)	362, 866, 1163, 1418
RsaNI	GTAC	4 cut(s)	361, 865, 1162, 1417
SacII	CCGCGG	1 cut(s)	535
SaqAI	TTAA	4 cut(s)	288, 1113, 1595, 2197
SchI	GAGTC	1 cut(s)	1072
ScrFI	CCNGG	3 cut(s)	441, 821, 1054
SduI	GDGCHC	2 cut(s)	1483, 1631
Sfr303I	CCGCGG	1 cut(s)	535
SgrBI	CCGCGG	1 cut(s)	535
SmlI	CTYRAG	1 cut(s)	1482
SmoI	CTYRAG	1 cut(s)	1482
SpeI	ACTAGT	1 cut(s)	1108
SseBI	AGGCCT	1 cut(s)	1925
SspMI	CTAG	2 cut(s)	1109, 2184
StuI	AGGCCT	1 cut(s)	1925
StyD4I	CCNGG	3 cut(s)	439, 819, 1052
StyI	CCWWGG	2 cut(s)	33, 2028
TaaI	ACNGT	4 cut(s)	202, 958, 1516, 1554
TaiI	ACGT	2 cut(s)	954, 1761
TaqI	TCGA	8 cut(s)	569, 693, 798, 1046, 1061, 1066, 1136, 1230
TatI	WGTACW	1 cut(s)	864
TauI	GCSGC	5 cut(s)	347, 431, 537, 711, 1193
TfiI	GAWTC	8 cut(s)	113, 944, 1016, 1082, 1237, 1361, 1732, 2110
Tru1I	TTAA	4 cut(s)	288, 1113, 1595, 2197
Tru9I	TTAA	4 cut(s)	288, 1113, 1595, 2197
TscAI	CASTG	4 cut(s)	723, 1443, 1647, 1924
TseFI	GTSAC	4 cut(s)	487, 714, 952, 1339
TseI	GCWGC	6 cut(s)	537, 1499, 1661, 1721, 1739, 2147
Tsp45I	GTSAC	4 cut(s)	487, 714, 952, 1339
TspDTI	ATGAA	5 cut(s)	72, 379, 394, 535, 603
TspRI	CASTG	4 cut(s)	723, 1443, 1647, 1924
Van91I	CCANNNNNTGG	1 cut(s)	1699
XapI	RAATTY	6 cut(s)	277, 782, 1132, 1386, 1890, 2153
XceI	RCATGY	1 cut(s)	1780
XmiI	GTMKAC	1 cut(s)	675
XmnI	GAANNNNTTC	1 cut(s)	1307
XspI	CTAG	2 cut(s)	1109, 2184
ZraI	GACGTC	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.