MD00G1024900.v1.1

Kynurenine formamidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0000645
Physical Location & Seq
Forward (+)
4071406 .. 4073362
1957 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1024900.v1.1.491

Sequence Viewer

Length: 153 bp
ATGAGGGATGGAGCACAGTGGTTTGTGGAGAACACAGACATTAAACTTGTTGGAATTGATTATTTATCCGCTGCTGCATATGATGATTTGATTCCATCCCACCTTGTTTTTCTAGAAGGCAGGGAAATGATGACCCCCTCCAAGGAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cyclase

Protein Analysis

51

Amino Acids

5.7

Weight (kDa)

4.56

Isoelectric Point (pI)

8.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000645)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G44542 AT4G34180 AT4G35220
fragaria_vesca FvH4_2g05360 FvH4_2g05360 FvH4_2g05380 FvH4_2g05400
malus_domestica MD00G1024900.v1.1 MD05G1087600.v1.1
prunus_persica Prupe.8G132800_v2.0.a1 Prupe.8G132800_v2.0.a1 Prupe.8G132900_v2.0.a1 Prupe.8G133000_v2.0.a1 Prupe.8G133300_v2.0.a1 Prupe.8G133400_v2.0.a1
pyrus_communis pycom05g08710
rosa_chinensis RchiOBHm_Chr6g0255621 RchiOBHm_Chr6g0255631 RchiOBHm_Chr6g0255661 RchiOBHm_Chr6g0255671 RchiOBHm_Chr6g0255681 RchiOBHm_Chr6g0255711
rosa_laevigata RLG00000014820 RLG00000014821 RLG00000014822 RLG00000014826
rosa_multiflora Rmu_co8458743.1_g000001 Rmu_sc0001422.1_g000004 Rmu_sc0005014.1_g000014 Rmu_sc0010421.1_g000001 Rmu_sc0010421.1_g000005 Rmu_sc0030046.1_g000001 Rmu_sc0039760.1_g000001 Rmu_ssc0000136.1_g000001 Rmu_ssc0000136.1_g000015
rosa_roxburghii Rroxscaffold_7G00209750 Rroxscaffold_7G00209760 Rroxscaffold_7G00209780 Rroxscaffold_7G00209790 Rroxscaffold_7G00209800 Rroxscaffold_7G00209810 Rroxscaffold_7G00209820 Rroxscaffold_7G00209830 Rroxscaffold_7G00209840
rosa_rugosa Rorug05G0559900 Rorug05G0560000 Rorug05G0560200 Rorug05G0560300 Rorug05G0560300 Rorug05G0560300 Rorug05G0560300 Rorug05G0560400 Rorug05G0560500
rosa_samantha Rh4BG250600 Rh6AG078600 Rh6AG078700 Rh6BG070800 Rh6BG071000 Rh6BG071200 Rh6BG071300 Rh6BG071600 Rh6BG071700 Rh6CG069300 Rh6CG069400 Rh6CG069700 Rh6CG069800 Rh6CG069900 Rh6DG066300 Rh6DG066400 Rh6DG066800 Rh6DG066900 Rh6DG067100 Rh6DG372200
rosa_wichuraiana Rw2G024460 Rw6G006610 Rw6G006770 Rw6G006780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 142
Alw21I GWGCWC 1 cut(s) 16
ApeKI GCWGC 2 cut(s) 71, 74
Bbv12I GWGCWC 1 cut(s) 16
BbvI GCAGC 2 cut(s) 58, 61
BccI CCATC 2 cut(s) 2, 103
BfaI CTAG 1 cut(s) 113
BisI GCNGC 2 cut(s) 72, 75
BlsI GCNGC 2 cut(s) 73, 76
BsaJI CCNNGG 1 cut(s) 141
Bsc4I CCNNNNNNNGG 1 cut(s) 142
BseDI CCNNGG 1 cut(s) 141
BseGI GGATG 2 cut(s) 13, 95
BseLI CCNNNNNNNGG 1 cut(s) 142
BseXI GCAGC 2 cut(s) 58, 61
BsiHKAI GWGCWC 1 cut(s) 16
BslI CCNNNNNNNGG 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 16
BspACI CCGC 1 cut(s) 69
BssECI CCNNGG 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 141
Bst4CI ACNGT 1 cut(s) 18
BstF5I GGATG 2 cut(s) 13, 95
BstV1I GCAGC 2 cut(s) 58, 61
BtsCI GGATG 2 cut(s) 13, 95
BtsIMutI CAGTG 1 cut(s) 23
Eco130I CCWWGG 1 cut(s) 141
EcoT14I CCWWGG 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 141
FaiI YATR 2 cut(s) 79, 81
FauNDI CATATG 1 cut(s) 79
Fnu4HI GCNGC 2 cut(s) 72, 75
FokI GGATG 2 cut(s) 20, 82
Fsp4HI GCNGC 2 cut(s) 72, 75
FspBI CTAG 1 cut(s) 113
GluI GCNGC 2 cut(s) 72, 75
HinfI GANTC 1 cut(s) 91
Hpy188III TCNNGA 1 cut(s) 113
HpyAV CCTTC 1 cut(s) 110
HpyCH4III ACNGT 1 cut(s) 18
HpyCH4V TGCA 1 cut(s) 77
LmnI GCTCC 1 cut(s) 11
LpnPI CCDG 1 cut(s) 106
Lsp1109I GCAGC 2 cut(s) 58, 61
MaeI CTAG 1 cut(s) 113
MhlI GDGCHC 1 cut(s) 16
MluCI AATT 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 31
MnlI CCTC 1 cut(s) 148
MseI TTAA 1 cut(s) 42
MspA1I CMGCKG 1 cut(s) 71
NdeI CATATG 1 cut(s) 79
PfeI GAWTC 1 cut(s) 91
PkrI GCNGC 2 cut(s) 73, 76
SaqAI TTAA 1 cut(s) 42
SatI GCNGC 2 cut(s) 72, 75
SduI GDGCHC 1 cut(s) 16
SetI ASST 1 cut(s) 105
SgeI CNNG 4 cut(s) 59, 116, 125, 133
Sse9I AATT 1 cut(s) 54
SsiI CCGC 1 cut(s) 69
SspMI CTAG 1 cut(s) 113
StyI CCWWGG 1 cut(s) 141
TaaI ACNGT 1 cut(s) 18
TasI AATT 1 cut(s) 54
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TscAI CASTG 1 cut(s) 23
TseI GCWGC 2 cut(s) 71, 74
TspRI CASTG 1 cut(s) 23
XbaI TCTAGA 1 cut(s) 112
XspI CTAG 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.