MD03G1028900.v1.1

Belongs to the glycosyltransferase 2 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000273
Physical Location & Seq
Reverse (-)
2353716 .. 2358216
4501 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1028900.v1.1.491

Sequence Viewer

Length: 2211 bp
ATGGGAAATGAAGGGTATTTGCCGTTGTTCGAGACGAGGAGAGCCAAGGGAACAGTCCTGTATAAAGTTTTTGCAGCATCTATATTTGCAGGAATATGTTTGATTTGGGTTTATAGATTGAGTCACATACCAAAAGCAGGAGAAGATGGAAGGTTTGGTTGGATTGGACTTTTGGGTGCTGAGATATGGTTTGGTTTTTACTGGCTCCTCACTCAGGCCTCCCGGTGGAACCGTGTGTATAGGTACACCTTCAAAGATAGGCTATCTCAAAGATACGAGAATGAATTGCCGGGAGTGGACGTATTTGTGTGCACGGCAGACCCAACCATTGAGCCGCCGATGATGGTGATTAACACGGTTTTGTCAGTGATGGCTTATGATTACCCGCCGGAGAAGCTGAGCGTCTATCTGTCCGATGATGGCGGGTCGGAACTTACGTACTATGCTCTCTTGGAGGCTGCTGAGTTTGCAAAGTATTGGATACCATACTGCAAGAGGTACAAAGTGGAGCCAAGGTCACCTGCTGCTTATTTTGTCACAGTATCTGCTGATGCAATTGATGATGATCAGGCTAAAGATTTCTGGGTTACTAAGAAATCATACAAAGAAATGGAGAATCAAATTCAAAATGCAGTGAAGGTAGGCAGGATTTCAGAAGAAGTACGATCAAAATGCAAAGGCTTTTCTCAGTGGGATCCAAATTCATCTAGACGTGACCATGACACCATTCTTCAAATTCTAATTGATGGGAGGAACCCTAATTCAGGAGATGTTGAAGGGTGTGTATTGCCAACTTTAGTGTATTTAGCTCGGGAGAAAAGGCCTCAACATCACCATAACTTCAAAGCTGGCGCTATGAATGCTCTGATTAGGGTGTCTTCAAACATTAGCAATGGGCAGGTCATTCTTAATGTAGACTGCGATATGTATTCGAACAACTCCATGGCCATACTTGATGCGCTTTGTTTCTTCATGGATGAAAAAGAAGGCCAAGAGGTTGCCTTCGTACAGTTCCCACAGAATTTTGAAAATATAACTAAGAATGACTTGTATAGCAATTCTTTACTCGTAATCTGCGAGGTGGAATTCCATGGCTTGGATGGTTATGGCGGCACTCTATATGTCGGAAGTGGATGTTTTCACAGAAGAGAGACTCTATGTGGGATAAAGTTTATCAAGGGATCCAAGATTGATATGAAATGGGAGTTCAGTGGACAAAGAGAAGAAAGTAGAATTCATGAATTAGAAGAAAATTCAAGAAGTCTTGCAAGCTGTACATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGATTGAAATACGGATGTCCGGTAGAAGATGTGATCACAGGGCTATCAATCCAATGCCGCGGTTGGAAATCAGTGTATTGCAATCCCACAAGGAAAGCTTTCTTAGGAGTAGCCCCAACTACGCTAACTCAGACGCTTGTGCAGCATAAGAGATGGACAGAAGGCAATTTCCAGATTTTGCTTTCTAAATACAGCCCTGCATGGTATGCACATGGAAAAATTAGCTTTGGTCTTCAACTTGGATATTGTTGCTACGGCTTCTGGTGTTCGAATTCCTTGGCAACGTTATTTTATTCGATTGTCCCTTCCCTTTACCTCCTCAAAGGCATTTCCTTATTTCCACAGGTCTGGAGCCCTTGGCTCATACCATTTGCATACGTGATAGTTTCGAAGTACACTTGGAGTTTTGTTGAGTTTTTGTGGTGTGGTGGCACAATCTTAGGTTGGTGGAACGATCAACGAATTTGGCTTTACAAGAGAACAAGTCCCTACCTATTTGCCTTCATTGACACCATTTTAAACTCGCTTGGATATTCTGATACATCATTCATGATAACATCTAAGGTGGATGACGAAGATGTGTCAGAACGATTCAAGAAAGAGGTTATGGAATTTGGAGATTCGTCACCAATGTTTACCATACTTGCAACACTAGCAATTCTCAATCTGTACTGCTTCCTTGGGTTTTTAAACAAAGCAATCTTTGGAGAAGGCATAATGAAATCTTACGAGAAAATGCCTTTGCAAATTCTTCTATCTGGGGTTTTAATTCTTCTCAACCTACCATTATACCAAGCCCTTTACCTAAGGAAGGACAAGGGAAAGATGCCAAGCTCTGTAGCTTTTAAATCGATGGCATTTGCAGTGTCTGCTTGTATTTGTTTCCAGTATTTGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cellulose_synt

Protein Analysis

737

Amino Acids

84.16

Weight (kDa)

6.59

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 99 - 397 1.2e-94 Cellulose synthase
Cellulose_synt PF03552 419 - 727 7.7e-46 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 529
Acc36I ACCTGC 2 cut(s) 529, 889
AccB7I CCANNNNNTGG 1 cut(s) 1096
AccI GTMKAC 1 cut(s) 915
AccII CGCG 1 cut(s) 1371
AciI CCGC 6 cut(s) 335, 386, 423, 1110, 1369, 1371
AclI AACGTT 1 cut(s) 1595
AclWI GGATC 4 cut(s) 689, 702, 1176, 1189
AcoI YGGCCR 1 cut(s) 945
AfaI GTAC 8 cut(s) 245, 440, 500, 663, 1008, 1276, 1706, 1982
AfiI CCNNNNNNNGG 6 cut(s) 137, 214, 225, 764, 1096, 2122
AjiI CACGTC 1 cut(s) 713
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
AluBI AGCT 8 cut(s) 397, 809, 848, 1272, 1409, 1536, 2145, 2153
AluI AGCT 8 cut(s) 397, 809, 848, 1272, 1409, 1536, 2145, 2153
Alw21I GWGCWC 1 cut(s) 314
Alw26I GTCTC 2 cut(s) 26, 1145
Alw44I GTGCAC 1 cut(s) 310
AlwI GGATC 4 cut(s) 689, 702, 1176, 1189
AlwNI CAGNNNCTG 2 cut(s) 545, 2180
Ama87I CYCGRG 1 cut(s) 810
AoxI GGCC 4 cut(s) 216, 821, 945, 988
ApaLI GTGCAC 1 cut(s) 310
ApeKI GCWGC 4 cut(s) 74, 458, 524, 1453
Asp700I GAANNNNTTC 1 cut(s) 1409
AspLEI GCGC 2 cut(s) 854, 961
AsuC2I CCSGG 2 cut(s) 223, 291
AsuHPI GGTGA 4 cut(s) 358, 510, 824, 1929
AsuII TTCGAA 3 cut(s) 932, 1580, 1700
AvaI CYCGRG 1 cut(s) 810
AxyI CCTNAGG 1 cut(s) 2117
BaeGI GKGCMC 1 cut(s) 314
BalI TGGCCA 1 cut(s) 947
BamHI GGATCC 2 cut(s) 694, 1181
BanII GRGCYC 1 cut(s) 1667
BbsI GAAGAC 2 cut(s) 870, 1535
Bbv12I GWGCWC 1 cut(s) 314
BbvI GCAGC 4 cut(s) 86, 445, 511, 1465
BccI CCATC 9 cut(s) 140, 337, 364, 413, 740, 1094, 1303, 1458, 2158
BceAI ACGGC 3 cut(s) 7, 330, 1582
BcgI CGANNNNNNTGC 2 cut(s) 654, 688
BciVI GTATCC 1 cut(s) 474
BclI TGATCA 2 cut(s) 565, 1344
BcnI CCSGG 2 cut(s) 223, 291
BcoDI GTCTC 2 cut(s) 26, 1145
BfaI CTAG 2 cut(s) 708, 1964
BfmI CTRYAG 1 cut(s) 2148
BfoI RGCGCY 1 cut(s) 855
BfuAI ACCTGC 2 cut(s) 529, 889
BfuI GTATCC 1 cut(s) 474
BisI GCNGC 7 cut(s) 75, 335, 459, 525, 1111, 1369, 1454
BlpI GCTNAGC 1 cut(s) 398
BlsI GCNGC 7 cut(s) 76, 336, 460, 526, 1112, 1370, 1455
Bme1390I CCNGG 2 cut(s) 223, 291
BmeT110I CYCGRG 1 cut(s) 810
BmgBI CACGTC 1 cut(s) 713
BmiI GGNNCC 7 cut(s) 206, 230, 510, 696, 755, 1183, 1664
BmrFI CCNGG 2 cut(s) 223, 291
BmsI GCATC 4 cut(s) 86, 541, 946, 2127
BpiI GAAGAC 2 cut(s) 870, 1535
BpmI CTGGAG 1 cut(s) 1681
Bpu1102I GCTNAGC 1 cut(s) 398
Bpu14I TTCGAA 3 cut(s) 932, 1580, 1700
BpuMI CCSGG 2 cut(s) 223, 291
Bsa29I ATCGAT 1 cut(s) 2162
BsaAI YACGTR 2 cut(s) 438, 1690
BsaBI GATNNNNATC 1 cut(s) 564
BsaJI CCNNGG 8 cut(s) 45, 512, 942, 1090, 1369, 1587, 1667, 1990
BsaWI WCCGGW 1 cut(s) 1330
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 500, 530
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 214, 225, 764, 1096, 2122
Bse1I ACTGG 2 cut(s) 206, 2197
Bse21I CCTNAGG 1 cut(s) 2117
Bse3DI GCAATG 1 cut(s) 898
Bse8I GATNNNNATC 1 cut(s) 564
BseCI ATCGAT 1 cut(s) 2162
BseDI CCNNGG 8 cut(s) 45, 512, 942, 1090, 1369, 1587, 1667, 1990
BseGI GGATG 5 cut(s) 982, 1105, 1139, 1331, 1885
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 6 cut(s) 137, 214, 225, 764, 1096, 2122
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 6 cut(s) 171, 227, 389, 453, 701, 1454
BseNI ACTGG 2 cut(s) 206, 2197
BseRI GAGGAG 3 cut(s) 52, 197, 1619
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 4 cut(s) 86, 445, 511, 1465
BsgI GTGCAG 1 cut(s) 1472
Bsh1236I CGCG 1 cut(s) 1371
BshFI GGCC 4 cut(s) 218, 823, 947, 990
BshVI ATCGAT 1 cut(s) 2162
BsiHKAI GWGCWC 1 cut(s) 314
BsiHKCI CYCGRG 1 cut(s) 810
BsiSI CCGG 4 cut(s) 223, 290, 389, 1331
BslFI GGGAC 2 cut(s) 1598, 1782
BslI CCNNNNNNNGG 6 cut(s) 137, 214, 225, 764, 1096, 2122
BsmAI GTCTC 2 cut(s) 26, 1145
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 2 cut(s) 1598, 1782
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 4 cut(s) 218, 823, 947, 990
BsoBI CYCGRG 1 cut(s) 810
Bsp119I TTCGAA 3 cut(s) 932, 1580, 1700
Bsp1286I GDGCHC 2 cut(s) 314, 1667
Bsp1407I TGTACA 1 cut(s) 1274
Bsp143I GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
Bsp1720I GCTNAGC 1 cut(s) 398
Bsp19I CCATGG 2 cut(s) 942, 1090
BspACI CCGC 6 cut(s) 335, 386, 423, 1110, 1369, 1371
BspANI GGCC 4 cut(s) 218, 823, 947, 990
BspCNI CTCAG 6 cut(s) 172, 226, 390, 454, 700, 1453
BspDI ATCGAT 1 cut(s) 2162
BspFNI CGCG 1 cut(s) 1371
BspHI TCATGA 2 cut(s) 1237, 1860
BspLI GGNNCC 7 cut(s) 206, 230, 510, 696, 755, 1183, 1664
BspMI ACCTGC 2 cut(s) 529, 889
BspPI GGATC 4 cut(s) 689, 702, 1176, 1189
BspT104I TTCGAA 3 cut(s) 932, 1580, 1700
BsrDI GCAATG 1 cut(s) 898
BsrGI TGTACA 1 cut(s) 1274
BsrI ACTGG 2 cut(s) 206, 2197
BssECI CCNNGG 8 cut(s) 45, 512, 942, 1090, 1369, 1587, 1667, 1990
BssMI GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
BssT1I CCWWGG 7 cut(s) 45, 512, 942, 1090, 1587, 1667, 1990
Bst4CI ACNGT 5 cut(s) 55, 233, 358, 541, 1011
Bst6I CTCTTC 2 cut(s) 1141, 1278
BstAPI GCANNNNNTGC 2 cut(s) 1517, 2180
BstAUI TGTACA 1 cut(s) 1274
BstBAI YACGTR 2 cut(s) 438, 1690
BstBI TTCGAA 3 cut(s) 932, 1580, 1700
BstC8I GCNNGC 2 cut(s) 850, 1270
BstDSI CCRYGG 3 cut(s) 942, 1090, 1369
BstEII GGTNACC 1 cut(s) 516
BstENI CCTNNNNNAGG 3 cut(s) 212, 762, 2120
BstF5I GGATG 5 cut(s) 982, 1105, 1139, 1331, 1885
BstFNI CGCG 1 cut(s) 1371
BstH2I RGCGCY 1 cut(s) 855
BstHHI GCGC 2 cut(s) 854, 961
BstKTI GATC 6 cut(s) 568, 668, 697, 1184, 1347, 1768
BstMAI GTCTC 2 cut(s) 26, 1145
BstMBI GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
BstMWI GCNNNNNNNGC 7 cut(s) 394, 467, 860, 1453, 1517, 1964, 2180
BstPI GGTNACC 1 cut(s) 516
BstSCI CCNGG 2 cut(s) 221, 289
BstSFI CTRYAG 1 cut(s) 2148
BstSLI GKGCMC 1 cut(s) 314
BstSNI TACGTA 1 cut(s) 438
BstUI CGCG 1 cut(s) 1371
BstV1I GCAGC 4 cut(s) 86, 445, 511, 1465
BstV2I GAAGAC 2 cut(s) 870, 1535
BstX2I RGATCY 2 cut(s) 694, 1181
BstXI CCANNNNNNTGG 1 cut(s) 1659
BstYI RGATCY 2 cut(s) 694, 1181
Bsu15I ATCGAT 1 cut(s) 2162
Bsu36I CCTNAGG 1 cut(s) 2117
BsuI GTATCC 1 cut(s) 474
BsuRI GGCC 4 cut(s) 218, 823, 947, 990
BsuTUI ATCGAT 1 cut(s) 2162
BtgI CCRYGG 3 cut(s) 942, 1090, 1369
BtrI CACGTC 1 cut(s) 713
BtsCI GGATG 5 cut(s) 982, 1105, 1139, 1331, 1885
BtsI GCAGTG 2 cut(s) 639, 2181
BtsIMutI CAGTG 6 cut(s) 372, 639, 695, 1216, 1389, 2181
BveI ACCTGC 2 cut(s) 529, 889
Cac8I GCNNGC 2 cut(s) 850, 1270
CaiI CAGNNNCTG 2 cut(s) 545, 2180
CciI TCATGA 2 cut(s) 1237, 1860
CfoI GCGC 2 cut(s) 854, 961
Cfr42I CCGCGG 1 cut(s) 1372
ClaI ATCGAT 1 cut(s) 2162
CseI GACGC 2 cut(s) 391, 1453
Csp6I GTAC 8 cut(s) 244, 439, 499, 662, 1007, 1275, 1705, 1981
CviAII CATG 8 cut(s) 719, 943, 973, 1091, 1238, 1512, 1523, 1861
CviQI GTAC 8 cut(s) 244, 439, 499, 662, 1007, 1275, 1705, 1981
DpnI GATC 6 cut(s) 567, 667, 696, 1183, 1346, 1767
DpnII GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
DraI TTTAAA 3 cut(s) 1830, 2001, 2158
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 2 cut(s) 1141, 1278
EarI CTCTTC 2 cut(s) 1141, 1278
Eco105I TACGTA 1 cut(s) 438
Eco130I CCWWGG 7 cut(s) 45, 512, 942, 1090, 1587, 1667, 1990
Eco147I AGGCCT 2 cut(s) 218, 823
Eco24I GRGCYC 1 cut(s) 1667
Eco81I CCTNAGG 1 cut(s) 2117
Eco88I CYCGRG 1 cut(s) 810
Eco91I GGTNACC 1 cut(s) 516
EcoNI CCTNNNNNAGG 3 cut(s) 212, 762, 2120
EcoO65I GGTNACC 1 cut(s) 516
EcoRI GAATTC 3 cut(s) 1085, 1233, 1582
EcoT14I CCWWGG 7 cut(s) 45, 512, 942, 1090, 1587, 1667, 1990
EcoT38I GRGCYC 1 cut(s) 1667
ErhI CCWWGG 7 cut(s) 45, 512, 942, 1090, 1587, 1667, 1990
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 8 cut(s) 722, 946, 976, 1094, 1241, 1515, 1526, 1864
FalI AAGNNNNNCTT 4 cut(s) 1031, 1063, 1393, 1425
FaqI GGGAC 2 cut(s) 1598, 1782
FatI CATG 8 cut(s) 718, 942, 972, 1090, 1237, 1511, 1522, 1860
FauI CCCGC 2 cut(s) 393, 416
FbaI TGATCA 2 cut(s) 565, 1344
FblI GTMKAC 1 cut(s) 915
Fnu4HI GCNGC 7 cut(s) 75, 335, 459, 525, 1111, 1369, 1454
FokI GGATG 5 cut(s) 989, 1112, 1146, 1338, 1892
FriOI GRGCYC 1 cut(s) 1667
Fsp4HI GCNGC 7 cut(s) 75, 335, 459, 525, 1111, 1369, 1454
FspBI CTAG 2 cut(s) 708, 1964
GlaI GCGC 2 cut(s) 853, 960
GluI GCNGC 7 cut(s) 75, 335, 459, 525, 1111, 1369, 1454
GsuI CTGGAG 1 cut(s) 1681
HaeII RGCGCY 1 cut(s) 855
HaeIII GGCC 4 cut(s) 218, 823, 947, 990
HapII CCGG 4 cut(s) 223, 290, 389, 1331
HgaI GACGC 2 cut(s) 391, 1453
HhaI GCGC 2 cut(s) 854, 961
Hin1II CATG 8 cut(s) 722, 946, 976, 1094, 1241, 1515, 1526, 1864
Hin6I GCGC 2 cut(s) 852, 959
HinP1I GCGC 2 cut(s) 852, 959
HindIII AAGCTT 1 cut(s) 1407
HinfI GANTC 5 cut(s) 121, 616, 1153, 1902, 1931
HpaII CCGG 4 cut(s) 223, 290, 389, 1331
HphI GGTGA 4 cut(s) 358, 510, 824, 1929
Hpy166II GTNNAC 7 cut(s) 246, 298, 312, 916, 1214, 1707, 1947
Hpy188I TCNGA 8 cut(s) 415, 430, 655, 867, 1127, 1443, 1849, 1897
Hpy8I GTNNAC 7 cut(s) 246, 298, 312, 916, 1214, 1707, 1947
HpyCH4III ACNGT 5 cut(s) 55, 233, 358, 541, 1011
HpyCH4IV ACGT 5 cut(s) 300, 437, 712, 1595, 1689
HpyF10VI GCNNNNNNNGC 7 cut(s) 394, 467, 860, 1453, 1517, 1964, 2180
HpySE526I ACGT 5 cut(s) 300, 437, 712, 1595, 1689
Hsp92II CATG 8 cut(s) 722, 946, 976, 1094, 1241, 1515, 1526, 1864
HspAI GCGC 2 cut(s) 852, 959
Ksp22I TGATCA 2 cut(s) 565, 1344
KspI CCGCGG 1 cut(s) 1372
Kzo9I GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
LmnI GCTCC 3 cut(s) 210, 508, 1662
Lsp1109I GCAGC 4 cut(s) 86, 445, 511, 1465
LweI GCATC 4 cut(s) 86, 541, 946, 2127
MaeI CTAG 2 cut(s) 708, 1964
MaeII ACGT 5 cut(s) 300, 437, 712, 1595, 1689
MaeIII GTNAC 6 cut(s) 122, 516, 535, 586, 713, 1935
MalI GATC 6 cut(s) 567, 667, 696, 1183, 1346, 1767
MboI GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
MfeI CAATTG 1 cut(s) 555
MflI RGATCY 2 cut(s) 694, 1181
MhlI GDGCHC 2 cut(s) 314, 1667
MlsI TGGCCA 1 cut(s) 947
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 2 cut(s) 130, 1147
MmeI TCCRAC 4 cut(s) 140, 408, 1105, 1355
Mox20I TGGCCA 1 cut(s) 947
MroXI GAANNNNTTC 1 cut(s) 1409
MscI TGGCCA 1 cut(s) 947
MseI TTAA 6 cut(s) 351, 909, 1829, 2000, 2078, 2157
Msp20I TGGCCA 1 cut(s) 947
MspA1I CMGCKG 1 cut(s) 1371
MspI CCGG 4 cut(s) 223, 290, 389, 1331
MspR9I CCNGG 2 cut(s) 223, 291
MunI CAATTG 1 cut(s) 555
Mva1269I GAATGC 1 cut(s) 865
MvnI CGCG 1 cut(s) 1371
MwoI GCNNNNNNNGC 7 cut(s) 394, 467, 860, 1453, 1517, 1964, 2180
NciI CCSGG 2 cut(s) 223, 291
NcoI CCATGG 2 cut(s) 942, 1090
NdeII GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
NlaIII CATG 8 cut(s) 722, 946, 976, 1094, 1241, 1515, 1526, 1864
NlaIV GGNNCC 7 cut(s) 206, 230, 510, 696, 755, 1183, 1664
NmuCI GTSAC 5 cut(s) 122, 516, 535, 713, 1935
NspV TTCGAA 3 cut(s) 932, 1580, 1700
PagI TCATGA 2 cut(s) 1237, 1860
PaqCI CACCTGC 1 cut(s) 529
PceI AGGCCT 2 cut(s) 218, 823
PcsI WCGNNNNNNNCGW 2 cut(s) 434, 1074
PctI GAATGC 1 cut(s) 865
PdmI GAANNNNTTC 1 cut(s) 1409
PfeI GAWTC 3 cut(s) 616, 1902, 1931
PflMI CCANNNNNTGG 1 cut(s) 1096
PkrI GCNGC 7 cut(s) 76, 336, 460, 526, 1112, 1370, 1455
PleI GAGTC 2 cut(s) 129, 1147
PpsI GAGTC 2 cut(s) 129, 1147
Ppu21I YACGTR 2 cut(s) 438, 1690
Psp1406I AACGTT 1 cut(s) 1595
PspEI GGTNACC 1 cut(s) 516
PspN4I GGNNCC 7 cut(s) 206, 230, 510, 696, 755, 1183, 1664
PstNI CAGNNNCTG 2 cut(s) 545, 2180
PsuI RGATCY 2 cut(s) 694, 1181
RsaI GTAC 8 cut(s) 245, 440, 500, 663, 1008, 1276, 1706, 1982
RsaNI GTAC 8 cut(s) 244, 439, 499, 662, 1007, 1275, 1705, 1981
SacII CCGCGG 1 cut(s) 1372
SaqAI TTAA 6 cut(s) 351, 909, 1829, 2000, 2078, 2157
SatI GCNGC 7 cut(s) 75, 335, 459, 525, 1111, 1369, 1454
Sau3AI GATC 6 cut(s) 565, 665, 694, 1181, 1344, 1765
SchI GAGTC 2 cut(s) 130, 1147
ScrFI CCNGG 2 cut(s) 223, 291
SduI GDGCHC 2 cut(s) 314, 1667
SfaNI GCATC 4 cut(s) 86, 541, 946, 2127
SfcI CTRYAG 1 cut(s) 2148
Sfr303I CCGCGG 1 cut(s) 1372
SfuI TTCGAA 3 cut(s) 932, 1580, 1700
SgrBI CCGCGG 1 cut(s) 1372
SnaBI TACGTA 1 cut(s) 438
SseBI AGGCCT 2 cut(s) 218, 823
SsiI CCGC 6 cut(s) 335, 386, 423, 1110, 1369, 1371
SspMI CTAG 2 cut(s) 708, 1964
StuI AGGCCT 2 cut(s) 218, 823
StyD4I CCNGG 2 cut(s) 221, 289
StyI CCWWGG 7 cut(s) 45, 512, 942, 1090, 1587, 1667, 1990
TaaI ACNGT 5 cut(s) 55, 233, 358, 541, 1011
TaiI ACGT 5 cut(s) 303, 440, 715, 1598, 1692
TaqI TCGA 6 cut(s) 30, 932, 1580, 1607, 1700, 2162
TatI WGTACW 3 cut(s) 1274, 1704, 1980
TauI GCSGC 3 cut(s) 337, 1113, 1371
TfiI GAWTC 3 cut(s) 616, 1902, 1931
Tru1I TTAA 6 cut(s) 351, 909, 1829, 2000, 2078, 2157
Tru9I TTAA 6 cut(s) 351, 909, 1829, 2000, 2078, 2157
TscAI CASTG 6 cut(s) 372, 639, 695, 1216, 1389, 2181
TseFI GTSAC 5 cut(s) 122, 516, 535, 713, 1935
TseI GCWGC 4 cut(s) 74, 458, 524, 1453
Tsp45I GTSAC 5 cut(s) 122, 516, 535, 713, 1935
TspGWI ACGGA 1 cut(s) 1338
TspRI CASTG 6 cut(s) 372, 639, 695, 1216, 1389, 2181
Van91I CCANNNNNTGG 1 cut(s) 1096
VneI GTGCAC 1 cut(s) 310
XagI CCTNNNNNAGG 3 cut(s) 212, 762, 2120
XbaI TCTAGA 1 cut(s) 707
XcmI CCANNNNNNNNNTGG 1 cut(s) 1097
XmiI GTMKAC 1 cut(s) 915
XmnI GAANNNNTTC 1 cut(s) 1409
XspI CTAG 2 cut(s) 708, 1964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.