Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

82840160 .. 82847465

Gene Structure 7306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG525500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGGAGAGGAAAGACATTTACCACTGTTTGAGACAACGAAGGCAAAGGGAAGAGTCCTCTATAGGTTTTCTGCGGTGTCTGTTTCTGTTGGAATATGTTTGATTTGGGTTTATAGAGTGACTCATATACCAAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGCTGTTGTTCGCCGCTGAGTTATGGTTTGCCTTTTACTGGTTCGTCACTCAAGCCCTTCGGTGGAGCCGCATCAACCGGCATACCTTCAAGGACAGGCTCTCTGAAAGTTATGAGAATGAGTTGCCGGGGGTGGACATATTCGTGTGCACCGCGGATCCGATCATAGAGCCACCGATTATGGTGATGAATACTGTTCTATCGGTCATGGCTTATGACTATCCGCCGGAGAAGCTCAGCGTGTATCTCTCCGACGATGGCGGCTCAGAATTTACGTACTATGCTTTTTTAGAAGCTGCTGAGTTTGCCAAGCGCTGGATACCCTATTGCAAGAAGTACAATGTGGAGCCAAGATCACCCGCTGCTTATTTTGTCTCAACAGCTTCTGATGATCAAAGTCAGAATCAGAAACAAGAAGGAGATTTAGCTGTAATTAAGAAATTATATGAGGACATGGCGACCAAAATTGGAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTGAGATCAAAACATAAAGGCTTTTCTCGATGGGACTCATATTCATCAAAACGTGACCATGAAACCATTCTTCAAATAGTAATTGATGGGAGAGACCCAAATGCAAGAGATGTTGAAGGGTGTGTGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGATTCACCATAACTTCAAAGCTGGTGCTATGAATGCTCTGATTAGGGTATCGTCAAATATAAGCAATGGGAAGTTGCTTCTTAATGTAGACTGTGACATGTATTCAAACAACTCGAAGGCCATAAGGGATGCACTCTGCTTCTTAATGGATGAAGAACAAGGCCATGAGATTGCATATGTACAGTTCCCACAGAATTTCGATAACCTTACTAAGAATGAATTATACGCTTCATTACGAGTAATTGCCGAGGTGGAAGCCCATGGTCTGGATAATTATTGGGGGACATTATATATTGGGAGTGGATGTTTTCACAGAAGAGAAACTCTTTGTGGGAAGAAATTCAGCAAGGTAAATAAGAGTGAGATGAAATGGGAGGACAAAAAAGGTGAAGAAATTGGCATTCATGAATTAGAAGAAAGTTCAAAAAGTCTTGCGAGTTGTACATTTGAAGAGAACACACAATGGGGAAAAGAGATGGGGGTGAAATATGGGTGTCCGGTTGAAGATGTGTTAACAGGACTATTAATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAAATGCAACCACACTGCTTCAGGTACTTGTGCAGCATAAGAGATGGTCGGAAGGCAACCTTCAAATTACGCTGTCTAAGTACAGTGTTGTATGGTATGGCCATGGAAAAATTAGTTTAGGCCATCAACTTGGATACCTTCGCTACAACTTATGGGCTGCTAATTGCTGGGCAGCACTAATTTACTCAACTCTTCCTTCACTTTATCTCCTTAGAGGCACGTCCTTATTTCCTCAGATTTCAAGTCGATGGATTATACCATTTGCATATGTTATAATTGCTAAGAACATTGGAAGCTTTGTGGAGTATCTATGGTGTGGAGGCACGAGCTTAGGTTGGTGGAATGACCAACGTATCTGGCTTTACCAGAGAACAACCTCATACTTATTTGCCTTCATCGACACCATTGTACACTACCTCGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGGCCGATGAGGACGTGTCCGAACGATATGAGAAAGAGATCATGGAATTTGGGGGTTCGTCTCCGATGTTTACCGTGCTGGCAACACTTGCATTGCTCAATCTGTACTGCTTTGCCTGGTTTGTGAAGGCAGCAATCACCGGAACAAAGGTTATTGCAGAGGTTTATGAGACAATGTTCTTACAGATTCTTCTATGTGCGGTTTTGATTTTAATTAACCTACCGTTGTACGAAGCCCTATACGTAAGGAAGGACAAGGGGAAGCTGCCGAGCTCTGTAGCATTTAAGTCGATGGCATTTGCTGGATTTGCTTGCATATGTTTTAAATTTCTATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

737

Amino Acids

84.2

Weight (kDa)

7.47

Isoelectric Point (pI)

40.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	99 - 399	1.9e-90	Cellulose synthase
Cellulose_synt	PF03552	421 - 723	4e-39	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1694
AccB7I	CCANNNNNTGG	3 cut(s)	137, 477, 1099
AccI	GTMKAC	1 cut(s)	921
AccII	CGCG	1 cut(s)	317
AclWI	GGATC	2 cut(s)	314, 327
AcoI	YGGCCR	2 cut(s)	1519, 1878
AcsI	RAATTY	5 cut(s)	431, 1027, 1172, 1922, 2201
AcuI	CTGAAG	1 cut(s)	1424
AfaI	GTAC	9 cut(s)	440, 500, 1014, 1276, 1446, 1502, 1830, 1982, 2105
AfeI	AGCGCT	1 cut(s)	476
AfiI	CCNNNNNNNGG	5 cut(s)	137, 201, 225, 477, 1099
AflIII	ACRYGT	2 cut(s)	930, 1890
AjiI	CACGTC	2 cut(s)	1641, 1891
AjnI	CCWGG	1 cut(s)	1991
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	2 cut(s)	314, 2150
Alw26I	GTCTC	6 cut(s)	26, 541, 753, 820, 1941, 2039
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	2 cut(s)	314, 327
AlwNI	CAGNNNCTG	1 cut(s)	548
Ama87I	CYCGRG	1 cut(s)	816
Aor51HI	AGCGCT	1 cut(s)	476
AoxI	GGCC	6 cut(s)	649, 951, 994, 1519, 1540, 1878
ApaLI	GTGCAC	1 cut(s)	310
ApeKI	GCWGC	7 cut(s)	458, 524, 1453, 1577, 1592, 2006, 2140
ApoI	RAATTY	5 cut(s)	431, 1027, 1172, 1922, 2201
AseI	ATTAAT	1 cut(s)	1358
Asp700I	GAANNNNTTC	3 cut(s)	732, 1172, 1409
AspLEI	GCGC	1 cut(s)	477
AsuC2I	CCSGG	1 cut(s)	291
AsuHPI	GGTGA	6 cut(s)	358, 510, 830, 1232, 1327, 2005
AvaI	CYCGRG	1 cut(s)	816
BaeGI	GKGCMC	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	1756, 1789
BalI	TGGCCA	1 cut(s)	1521
BamHI	GGATCC	1 cut(s)	319
BanII	GRGCYC	1 cut(s)	2150
BauI	CACGAG	1 cut(s)	1744
Bbv12I	GWGCWC	2 cut(s)	314, 2150
BbvI	GCAGC	7 cut(s)	445, 511, 1465, 1564, 1604, 2018, 2127
BcgI	CGANNNNNNTGC	2 cut(s)	2145, 2179
BciT130I	CCWGG	1 cut(s)	1993
BciVI	GTATCC	3 cut(s)	474, 1547, 1835
BclI	TGATCA	1 cut(s)	553
BcnI	CCSGG	1 cut(s)	291
BcoDI	GTCTC	6 cut(s)	26, 541, 753, 820, 1941, 2039
BfaI	CTAG	1 cut(s)	647
BfmI	CTRYAG	2 cut(s)	61, 2151
BfoI	RGCGCY	1 cut(s)	478
BfuI	GTATCC	3 cut(s)	474, 1547, 1835
BglI	GCCNNNNNGGC	1 cut(s)	1877
BlpI	GCTNAGC	1 cut(s)	398
Bme1390I	CCNGG	2 cut(s)	291, 1993
BmeT110I	CYCGRG	1 cut(s)	816
BmgBI	CACGTC	2 cut(s)	1641, 1891
BmiI	GGNNCC	3 cut(s)	230, 321, 510
BmrFI	CCNGG	2 cut(s)	291, 1993
BmsI	GCATC	3 cut(s)	153, 243, 952
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	1750
Bpu1102I	GCTNAGC	1 cut(s)	398
BpuEI	CTTGAG	1 cut(s)	198
BpuMI	CCSGG	1 cut(s)	291
BsaAI	YACGTR	2 cut(s)	438, 2119
BsaBI	GATNNNNATC	1 cut(s)	1378
BsaI	GGTCTC	2 cut(s)	753, 820
BsaJI	CCNNGG	8 cut(s)	290, 315, 1080, 1093, 1369, 1522, 1837, 1872
BsaWI	WCCGGW	2 cut(s)	1330, 2015
BsaXI	ACNNNNNCTCC	4 cut(s)	1123, 1153, 1611, 1641
Bsc4I	CCNNNNNNNGG	5 cut(s)	137, 201, 225, 477, 1099
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	1 cut(s)	206
Bse3DI	GCAATG	2 cut(s)	904, 1967
Bse8I	GATNNNNATC	1 cut(s)	1378
BseBI	CCWGG	1 cut(s)	1993
BseDI	CCNNGG	8 cut(s)	290, 315, 1080, 1093, 1369, 1522, 1837, 1872
BseGI	GGATG	5 cut(s)	168, 967, 988, 1142, 1379
BseJI	GATNNNNATC	1 cut(s)	1378
BseLI	CCNNNNNNNGG	5 cut(s)	137, 201, 225, 477, 1099
BseMI	GCAATG	2 cut(s)	904, 1967
BseMII	CTCAG	5 cut(s)	171, 412, 441, 453, 1667
BseNI	ACTGG	1 cut(s)	206
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	7 cut(s)	445, 511, 1465, 1564, 1604, 2018, 2127
BseYI	CCCAGC	1 cut(s)	1587
BsgI	GTGCAG	1 cut(s)	1472
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	6 cut(s)	651, 953, 996, 1521, 1542, 1880
BsiHKAI	GWGCWC	2 cut(s)	314, 2150
BsiHKCI	CYCGRG	1 cut(s)	816
BsiSI	CCGG	5 cut(s)	241, 290, 389, 1331, 2016
BslFI	GGGAC	2 cut(s)	713, 1129
BslI	CCNNNNNNNGG	5 cut(s)	137, 201, 225, 477, 1099
BsmAI	GTCTC	6 cut(s)	26, 541, 753, 820, 1941, 2039
BsmBI	CGTCTC	1 cut(s)	1941
BsmFI	GGGAC	2 cut(s)	713, 1129
BsmI	GAATGC	2 cut(s)	871, 1233
BsnI	GGCC	6 cut(s)	651, 953, 996, 1521, 1542, 1880
Bso31I	GGTCTC	2 cut(s)	753, 820
BsoBI	CYCGRG	1 cut(s)	816
Bsp1286I	GDGCHC	2 cut(s)	314, 2150
Bsp1407I	TGTACA	3 cut(s)	1012, 1274, 1828
Bsp143I	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
Bsp1720I	GCTNAGC	1 cut(s)	398
Bsp19I	CCATGG	2 cut(s)	1093, 1522
BspANI	GGCC	6 cut(s)	651, 953, 996, 1521, 1542, 1880
BspCNI	CTCAG	5 cut(s)	172, 411, 440, 454, 1666
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	3 cut(s)	230, 321, 510
BspPI	GGATC	2 cut(s)	314, 327
BspTNI	GGTCTC	2 cut(s)	753, 820
BsrDI	GCAATG	2 cut(s)	904, 1967
BsrFI	RCCGGY	1 cut(s)	240
BsrGI	TGTACA	3 cut(s)	1012, 1274, 1828
BsrI	ACTGG	1 cut(s)	206
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	8 cut(s)	290, 315, 1080, 1093, 1369, 1522, 1837, 1872
BssMI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
BssSI	CACGAG	1 cut(s)	1744
BssT1I	CCWWGG	3 cut(s)	1093, 1522, 1872
Bst2BI	CACGAG	1 cut(s)	1744
Bst2UI	CCWGG	1 cut(s)	1993
Bst4CI	ACNGT	7 cut(s)	27, 358, 926, 1017, 1505, 1951, 2100
Bst6I	CTCTTC	5 cut(s)	46, 818, 1144, 1278, 1617
BstAPI	GCANNNNNTGC	1 cut(s)	1964
BstAUI	TGTACA	3 cut(s)	1012, 1274, 1828
BstBAI	YACGTR	2 cut(s)	438, 2119
BstC8I	GCNNGC	2 cut(s)	1956, 2188
BstDSI	CCRYGG	3 cut(s)	315, 1093, 1522
BstF5I	GGATG	5 cut(s)	168, 967, 988, 1142, 1379
BstFNI	CGCG	1 cut(s)	317
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	1 cut(s)	477
BstKTI	GATC	6 cut(s)	322, 327, 518, 556, 674, 1917
BstMAI	GTCTC	6 cut(s)	26, 541, 753, 820, 1941, 2039
BstMBI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
BstMWI	GCNNNNNNNGC	6 cut(s)	394, 467, 866, 1877, 1964, 2183
BstNI	CCWGG	1 cut(s)	1993
BstNSI	RCATGY	1 cut(s)	934
BstSCI	CCNGG	2 cut(s)	289, 1991
BstSFI	CTRYAG	2 cut(s)	61, 2151
BstSLI	GKGCMC	1 cut(s)	314
BstSNI	TACGTA	2 cut(s)	438, 2119
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	7 cut(s)	445, 511, 1465, 1564, 1604, 2018, 2127
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	1 cut(s)	1550
BstYI	RGATCY	1 cut(s)	319
BsuI	GTATCC	3 cut(s)	474, 1547, 1835
BsuRI	GGCC	6 cut(s)	651, 953, 996, 1521, 1542, 1880
BtgI	CCRYGG	3 cut(s)	315, 1093, 1522
BtrI	CACGTC	2 cut(s)	1641, 1891
BtsCI	GGATG	5 cut(s)	168, 967, 988, 1142, 1379
BtsI	GCAGTG	2 cut(s)	645, 1433
BtsIMutI	CAGTG	5 cut(s)	23, 645, 1389, 1433, 1510
Cac8I	GCNNGC	2 cut(s)	1956, 2188
CaiI	CAGNNNCTG	1 cut(s)	548
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	1 cut(s)	477
Cfr10I	RCCGGY	1 cut(s)	240
Cfr42I	CCGCGG	1 cut(s)	318
Csp6I	GTAC	9 cut(s)	439, 499, 1013, 1275, 1445, 1501, 1829, 1981, 2104
CviAII	CATG	9 cut(s)	370, 616, 725, 931, 998, 1094, 1238, 1523, 1918
CviQI	GTAC	9 cut(s)	439, 499, 1013, 1275, 1445, 1501, 1829, 1981, 2104
DpnI	GATC	6 cut(s)	321, 326, 517, 555, 673, 1916
DpnII	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
DraI	TTTAAA	1 cut(s)	2200
EaeI	YGGCCR	2 cut(s)	1519, 1878
Eam1104I	CTCTTC	5 cut(s)	46, 818, 1144, 1278, 1617
EarI	CTCTTC	5 cut(s)	46, 818, 1144, 1278, 1617
EciI	GGCGGA	1 cut(s)	375
Ecl136II	GAGCTC	1 cut(s)	2148
Eco105I	TACGTA	2 cut(s)	438, 2119
Eco130I	CCWWGG	3 cut(s)	1093, 1522, 1872
Eco24I	GRGCYC	1 cut(s)	2150
Eco31I	GGTCTC	2 cut(s)	753, 820
Eco47III	AGCGCT	1 cut(s)	476
Eco53kI	GAGCTC	1 cut(s)	2148
Eco57I	CTGAAG	1 cut(s)	1424
Eco88I	CYCGRG	1 cut(s)	816
EcoICRI	GAGCTC	1 cut(s)	2148
EcoRII	CCWGG	1 cut(s)	1991
EcoT14I	CCWWGG	3 cut(s)	1093, 1522, 1872
EcoT38I	GRGCYC	1 cut(s)	2150
ErhI	CCWWGG	3 cut(s)	1093, 1522, 1872
Esp3I	CGTCTC	1 cut(s)	1941
FaeI	CATG	9 cut(s)	373, 619, 728, 934, 1001, 1097, 1241, 1526, 1921
FalI	AAGNNNNNCTT	4 cut(s)	1393, 1425, 1464, 1496
FaqI	GGGAC	2 cut(s)	713, 1129
FatI	CATG	9 cut(s)	369, 615, 724, 930, 997, 1093, 1237, 1522, 1917
FauI	CCCGC	1 cut(s)	529
FauNDI	CATATG	3 cut(s)	1009, 1687, 2192
FbaI	TGATCA	1 cut(s)	553
FblI	GTMKAC	1 cut(s)	921
FokI	GGATG	5 cut(s)	175, 974, 995, 1149, 1386
FriOI	GRGCYC	1 cut(s)	2150
FspBI	CTAG	1 cut(s)	647
GlaI	GCGC	1 cut(s)	476
GsaI	CCCAGC	1 cut(s)	1591
GsuI	CTGGAG	1 cut(s)	159
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	6 cut(s)	651, 953, 996, 1521, 1542, 1880
HapII	CCGG	5 cut(s)	241, 290, 389, 1331, 2016
HhaI	GCGC	1 cut(s)	477
Hin1II	CATG	9 cut(s)	373, 619, 728, 934, 1001, 1097, 1241, 1526, 1921
Hin6I	GCGC	1 cut(s)	475
HinP1I	GCGC	1 cut(s)	475
HincII	GTYRAC	1 cut(s)	1347
HindII	GTYRAC	1 cut(s)	1347
HindIII	AAGCTT	2 cut(s)	1407, 1714
HinfI	GANTC	7 cut(s)	54, 121, 565, 701, 835, 1850, 2062
HpaI	GTTAAC	1 cut(s)	1347
HpaII	CCGG	5 cut(s)	241, 290, 389, 1331, 2016
HphI	GGTGA	6 cut(s)	358, 510, 830, 1232, 1327, 2005
Hpy166II	GTNNAC	6 cut(s)	298, 312, 922, 1347, 1831, 1947
Hpy188III	TCNNGA	4 cut(s)	693, 818, 1100, 1238
Hpy8I	GTNNAC	6 cut(s)	298, 312, 922, 1347, 1831, 1947
Hpy99I	CGWCG	1 cut(s)	419
HpyCH4III	ACNGT	7 cut(s)	27, 358, 926, 1017, 1505, 1951, 2100
HpyCH4IV	ACGT	6 cut(s)	437, 718, 1640, 1771, 1890, 2118
HpyF10VI	GCNNNNNNNGC	6 cut(s)	394, 467, 866, 1877, 1964, 2183
HpySE526I	ACGT	6 cut(s)	437, 718, 1640, 1771, 1890, 2118
Hsp92II	CATG	9 cut(s)	373, 619, 728, 934, 1001, 1097, 1241, 1526, 1921
HspAI	GCGC	1 cut(s)	475
Ksp22I	TGATCA	1 cut(s)	553
KspAI	GTTAAC	1 cut(s)	1347
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
LmnI	GCTCC	2 cut(s)	228, 508
Lsp1109I	GCAGC	7 cut(s)	445, 511, 1465, 1564, 1604, 2018, 2127
LweI	GCATC	3 cut(s)	153, 243, 952
MaeI	CTAG	1 cut(s)	647
MaeII	ACGT	6 cut(s)	437, 718, 1640, 1771, 1890, 2118
MaeIII	GTNAC	4 cut(s)	118, 208, 719, 926
MalI	GATC	6 cut(s)	321, 326, 517, 555, 673, 1916
MboI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	2 cut(s)	314, 2150
MlsI	TGGCCA	1 cut(s)	1521
MluNI	TGGCCA	1 cut(s)	1521
MlyI	GAGTC	3 cut(s)	63, 115, 695
MmeI	TCCRAC	5 cut(s)	70, 140, 438, 1421, 1449
Mox20I	TGGCCA	1 cut(s)	1521
MroXI	GAANNNNTTC	3 cut(s)	732, 1172, 1409
MscI	TGGCCA	1 cut(s)	1521
MslI	CAYNNNNRTG	1 cut(s)	305
Msp20I	TGGCCA	1 cut(s)	1521
MspA1I	CMGCKG	3 cut(s)	179, 317, 524
MspI	CCGG	5 cut(s)	241, 290, 389, 1331, 2016
MspR9I	CCNGG	2 cut(s)	291, 1993
Mva1269I	GAATGC	2 cut(s)	871, 1233
MvaI	CCWGG	1 cut(s)	1993
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	6 cut(s)	394, 467, 866, 1877, 1964, 2183
NciI	CCSGG	1 cut(s)	291
NcoI	CCATGG	2 cut(s)	1093, 1522
NdeI	CATATG	3 cut(s)	1009, 1687, 2192
NdeII	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
NlaIII	CATG	9 cut(s)	373, 619, 728, 934, 1001, 1097, 1241, 1526, 1921
NlaIV	GGNNCC	3 cut(s)	230, 321, 510
NmeAIII	GCCGAG	3 cut(s)	1105, 1394, 2169
NmuCI	GTSAC	4 cut(s)	118, 208, 719, 926
NspI	RCATGY	1 cut(s)	934
PacI	TTAATTAA	1 cut(s)	2091
PagI	TCATGA	1 cut(s)	1237
PciI	ACATGT	1 cut(s)	930
PctI	GAATGC	2 cut(s)	871, 1233
PdmI	GAANNNNTTC	3 cut(s)	732, 1172, 1409
PfeI	GAWTC	4 cut(s)	565, 835, 1850, 2062
PflMI	CCANNNNNTGG	3 cut(s)	137, 477, 1099
PleI	GAGTC	3 cut(s)	62, 115, 695
PpsI	GAGTC	3 cut(s)	62, 115, 695
Ppu21I	YACGTR	2 cut(s)	438, 2119
PscI	ACATGT	1 cut(s)	930
PshBI	ATTAAT	1 cut(s)	1358
PsiI	TTATAA	1 cut(s)	1694
Psp124BI	GAGCTC	1 cut(s)	2150
Psp6I	CCWGG	1 cut(s)	1991
PspFI	CCCAGC	1 cut(s)	1587
PspGI	CCWGG	1 cut(s)	1991
PspN4I	GGNNCC	3 cut(s)	230, 321, 510
PstNI	CAGNNNCTG	1 cut(s)	548
PsuI	RGATCY	1 cut(s)	319
RsaI	GTAC	9 cut(s)	440, 500, 1014, 1276, 1446, 1502, 1830, 1982, 2105
RsaNI	GTAC	9 cut(s)	439, 499, 1013, 1275, 1445, 1501, 1829, 1981, 2104
RseI	CAYNNNNRTG	1 cut(s)	305
SacI	GAGCTC	1 cut(s)	2150
SacII	CCGCGG	1 cut(s)	318
Sau3AI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1914
SchI	GAGTC	3 cut(s)	63, 115, 695
ScrFI	CCNGG	2 cut(s)	291, 1993
SduI	GDGCHC	2 cut(s)	314, 2150
SfaNI	GCATC	3 cut(s)	153, 243, 952
SfcI	CTRYAG	2 cut(s)	61, 2151
Sfr303I	CCGCGG	1 cut(s)	318
SgrBI	CCGCGG	1 cut(s)	318
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	1 cut(s)	213
SmoI	CTYRAG	1 cut(s)	213
SnaBI	TACGTA	2 cut(s)	438, 2119
SspMI	CTAG	1 cut(s)	647
SstI	GAGCTC	1 cut(s)	2150
StyD4I	CCNGG	2 cut(s)	289, 1991
StyI	CCWWGG	3 cut(s)	1093, 1522, 1872
TaaI	ACNGT	7 cut(s)	27, 358, 926, 1017, 1505, 1951, 2100
TaiI	ACGT	6 cut(s)	440, 721, 1643, 1774, 1893, 2121
TaqI	TCGA	6 cut(s)	694, 947, 1032, 1666, 1818, 2165
TaqII	GACCGA	1 cut(s)	355
TatI	WGTACW	6 cut(s)	498, 1012, 1274, 1500, 1828, 1980
TauI	GCSGC	4 cut(s)	179, 234, 426, 654
TfiI	GAWTC	4 cut(s)	565, 835, 1850, 2062
TscAI	CASTG	5 cut(s)	30, 645, 1389, 1440, 1510
TseFI	GTSAC	4 cut(s)	118, 208, 719, 926
TseI	GCWGC	7 cut(s)	458, 524, 1453, 1577, 1592, 2006, 2140
Tsp45I	GTSAC	4 cut(s)	118, 208, 719, 926
TspRI	CASTG	5 cut(s)	30, 645, 1389, 1440, 1510
Van91I	CCANNNNNTGG	3 cut(s)	137, 477, 1099
VneI	GTGCAC	1 cut(s)	310
VspI	ATTAAT	1 cut(s)	1358
XapI	RAATTY	5 cut(s)	431, 1027, 1172, 1922, 2201
XceI	RCATGY	1 cut(s)	934
XmiI	GTMKAC	1 cut(s)	921
XmnI	GAANNNNTTC	3 cut(s)	732, 1172, 1409
XspI	CTAG	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.