Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG537300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGGGAAGAAGGAAGGAGGAGAAGGAGAAGAGAGTAGTAGTAGTAGTACTACTACTACTCTTCCATTGTTTGAGAGCAAAACAGCAAGATTTAGAGGTGTTTATAGGGTTTTTGCCTCAACTATATTTGTGGGTGTGTGTTTGATATGGGTGTACAGACTAATAAACATCCCGAAAGCTGGAGAGAGAGGGAGATGGGCTTGGATTGGTATGCTCATGGCTGAGTTCTTGTTTGGTTTGTATTGGATCATCACTCAGTCTGTTCGCTGGAGTGTCACTAATCGTCAACCTCTCAAGAATAGACTCTCACAGAGATATGAGGAGAAGTTGCCGGGTGTTGATGTTTTTATATGCACTGCAGACCCGAAAATGGAGCCGCCAAGTTTGGTGATTAACACTGTGTTATCAGTCCTGTCCTGCAATTTTCCATCTGAGAAGTTGAGTGTTTATCTCTCGGATGATGGCGGTTCACAGTTTACTTTCTATGCTCTTTTGGAGGCGTCTCGGTTCTCGAAGTATTGGATACCCTTTTGCAAGAAGTTCAAGGTTGAACCAAAGGCACCGGAGGCTTACTTTGCCCTGCATTCTGACGTTCATGACACCAAATATGGTCCAGAATGGTTTGATACCAAGAAACTTTATGAAGAAATGAAAAATCGGATCGATTCTGTTGTTGAAAGTGGGAAGATACCAGAAGAAACAAGGATTCAACACAAAGGGTTCTCAGAATGGAACCTTAAAGTAGCAAAGAATGATCATCACTCAATTGTGCAGATTATAACTGATGGAAGAGACACAAATGCCGTGGACAACGATGGATGCCGATTACCAACTATTGTCTACATGTCAAGAGAAAAGAGACCCCAACAGCCACACAACTTCAAAGCTGGAGCCATGAATGCACTGCTGAGAGTGTCATCAGAGATAAGCAATGCACCCTTCATTCTCAACTTGGACTGTGACATGTACGCAAACAATGCAGATGCAATACGAGAGGCACTTTGTTTCTTCTTGGATGAAAAGACTGGCCACGAGACTGCTTATGTGCAACATCCGCAGTTCTACAACAATCTCACAAAGAATGATATTTATGGAAATGCGTGCTTCGTAACTAATGCGGTTGAACTGGCTGGGTTAGGTGGATATGGAGCGGCCTTATATTGTGGCACCGGATGTTTCCATCGAAGAGAATGTCTCTGTGGAAAGAAGTATTCAAAGGGTTACACAGAAAAATGGAACATTGATGGCCAGAAGAGTACTATTGACAAAAGTATCCAAGAATTGGAGGAATCTACGAAACCTCTTATCGATTGTAGCTATGAAAAGGGCAGTCAATGGGGAAAAGAGATGGGACTGATATATGGATGCCCTGTCGAAGATATAGTTACTGGTTTGGCAATACAATGCAGGGGTTGGAAATCAGTTTATTACAATCCAGAAAGGCCTTCCTTTGTTGGTGTTGCTCCAAACACCCTAGAAATCGCACTTGTTCAACAAAAGAGGTGGTCTGAGGGCATGTTTCAGATATTTTTCTCCGAGTATTGCCCTTTCATATATGGACATGGGAAGATACACTTTGGTGCCCAAATGGGATATTGCCTCTACCTTCTATGGGCTCCAGTTTCATTCCCAACTTTGTATTATGCACTTGTTCCTCCTCTTTGCTTGCTCCATGGCATTCCCTTGTTCCCCAAGGTGTCAAGCCTATGGTTCCTAGCATTTGCTTATGTTTTTGTAGCAAAGAATGCATACAGCATAGTTGAATTTGTGATGTGTGGGGGTAGACTCAAAGCATGGTGGAACCTACAAAGAATGTGGCTTATCCGACGAATCACTTCGTACTTCTTTGCCTTCTTCGACACCATAAAGAGGCAATTGGGGCTATCTGAAACACACTTTGCCCTCACCGATAAGGTTGTCACCGAGGATGTGTTAAAGAGGTATGAGCAAGAGGTTTTGGAATTTGGAAGCTCAAGCATTATGTACACTGTAATGGCAACATCGGCATTGCTGAACTTGGTGAGCTTAGTTTTGGGGACAAAGCGGGTTGTGATGGATTTAGAGTTGAAGGCCTTGGACCAGTTCATTAGTCAAGTTATTCTTTGTGGCATATTGGTTTTGATCAATATACCAGTGTATGAAGCTCTCTTCTTGCGCAGTGATAAGGGCCATATACCATCCTCTGTCATGTACAAGTCTGTTTTTGTGCTCACGTTGGCATGCTTGATGCCTATATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

746

Amino Acids

84.9

Weight (kDa)

8.07

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	113 - 406	1.4e-89	Cellulose synthase
Cellulose_synt	PF03552	429 - 742	2.6e-43	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	779
Acc16I	TGCGCA	1 cut(s)	2156
AccB1I	GGYRCC	3 cut(s)	559, 1166, 1580
AccB7I	CCANNNNNTGG	1 cut(s)	1282
AccBSI	CCGCTC	1 cut(s)	1151
AccI	GTMKAC	2 cut(s)	840, 1783
AciI	CCGC	6 cut(s)	377, 465, 1055, 1118, 1151, 2044
AclWI	GGATC	2 cut(s)	254, 668
AcoI	YGGCCR	2 cut(s)	1027, 1246
AcsI	RAATTY	2 cut(s)	1763, 1961
AcyI	GRCGYC	1 cut(s)	500
AfaI	GTAC	7 cut(s)	49, 155, 968, 1258, 1841, 1985, 2192
AfiI	CCNNNNNNNGG	5 cut(s)	179, 370, 1282, 1612, 1869
AflIII	ACRYGT	2 cut(s)	843, 963
AleI	CACNNNNGTG	1 cut(s)	1578
AluBI	AGCT	6 cut(s)	179, 887, 1317, 1971, 2025, 2144
AluI	AGCT	6 cut(s)	179, 887, 1317, 1971, 2025, 2144
Alw21I	GWGCWC	1 cut(s)	2211
Alw26I	GTCTC	5 cut(s)	507, 786, 853, 1028, 1199
AlwI	GGATC	2 cut(s)	254, 668
AoxI	GGCC	6 cut(s)	1027, 1152, 1246, 1442, 2070, 2167
ApoI	RAATTY	2 cut(s)	1763, 1961
ArsI	GACNNNNNNTTYG	2 cut(s)	1177, 1209
Asp700I	GAANNNNTTC	1 cut(s)	1834
AspLEI	GCGC	1 cut(s)	2157
AspS9I	GGNCC	3 cut(s)	611, 2077, 2167
AsuC2I	CCSGG	1 cut(s)	333
AsuHPI	GGTGA	4 cut(s)	400, 1897, 1912, 2032
AvaII	GGWCC	2 cut(s)	611, 2077
BaeGI	GKGCMC	1 cut(s)	1585
BaeI	ACNNNNGTAYC	2 cut(s)	1255, 1288
BalI	TGGCCA	2 cut(s)	1029, 1248
BanI	GGYRCC	3 cut(s)	559, 1166, 1580
BanII	GRGCYC	1 cut(s)	1618
BauI	CACGAG	1 cut(s)	1031
Bbv12I	GWGCWC	1 cut(s)	2211
BceAI	ACGGC	1 cut(s)	788
BciVI	GTATCC	2 cut(s)	516, 1283
BclI	TGATCA	2 cut(s)	754, 2121
BcnI	CCSGG	1 cut(s)	333
BcoDI	GTCTC	5 cut(s)	507, 786, 853, 1028, 1199
BfaI	CTAG	3 cut(s)	1475, 1715, 2239
BfmI	CTRYAG	1 cut(s)	357
BfuI	GTATCC	2 cut(s)	516, 1283
BisI	GCNGC	2 cut(s)	377, 1152
BlsI	GCNGC	2 cut(s)	378, 1153
BmcAI	AGTACT	2 cut(s)	49, 1258
Bme1390I	CCNGG	1 cut(s)	333
Bme18I	GGWCC	2 cut(s)	611, 2077
BmgT120I	GGNCC	3 cut(s)	611, 2077, 2167
BmiI	GGNNCC	9 cut(s)	375, 561, 734, 892, 1168, 1582, 1617, 1712, 1802
BmrFI	CCNGG	1 cut(s)	333
BmsI	GCATC	4 cut(s)	809, 973, 1355, 2217
BplI	GAGNNNNNCTC	2 cut(s)	1179, 1211
BpmI	CTGGAG	4 cut(s)	201, 289, 909, 1602
BpuEI	CTTGAG	2 cut(s)	278, 1957
BpuMI	CCSGG	1 cut(s)	333
Bsa29I	ATCGAT	2 cut(s)	663, 1308
BsaHI	GRCGYC	1 cut(s)	500
BsaI	GGTCTC	1 cut(s)	853
BsaJI	CCNNGG	5 cut(s)	804, 1672, 1692, 1923, 2073
BsaWI	WCCGGW	2 cut(s)	562, 1169
Bsc4I	CCNNNNNNNGG	5 cut(s)	179, 370, 1282, 1612, 1869
Bse1I	ACTGG	6 cut(s)	1030, 1131, 1393, 1619, 2080, 2132
Bse3DI	GCAATG	2 cut(s)	937, 2006
BseCI	ATCGAT	2 cut(s)	663, 1308
BseDI	CCNNGG	5 cut(s)	804, 1672, 1692, 1923, 2073
BseGI	GGATG	9 cut(s)	168, 463, 824, 1021, 1051, 1178, 1370, 1933, 2177
BseLI	CCNNNNNNNGG	5 cut(s)	179, 370, 1282, 1612, 1869
BseMI	GCAATG	2 cut(s)	937, 2006
BseMII	CTCAG	6 cut(s)	213, 269, 423, 738, 899, 1500
BseNI	ACTGG	6 cut(s)	1030, 1131, 1393, 1619, 2080, 2132
BseRI	GAGGAG	3 cut(s)	33, 335, 1647
BseSI	GKGCMC	1 cut(s)	1585
BseYI	CCCAGC	1 cut(s)	1130
BsgI	GTGCAG	1 cut(s)	791
BshFI	GGCC	6 cut(s)	1029, 1154, 1248, 1444, 2072, 2169
BshNI	GGYRCC	3 cut(s)	559, 1166, 1580
BshVI	ATCGAT	2 cut(s)	663, 1308
BsiHKAI	GWGCWC	1 cut(s)	2211
BsiSI	CCGG	3 cut(s)	332, 563, 1170
BslFI	GGGAC	2 cut(s)	1365, 2050
BslI	CCNNNNNNNGG	5 cut(s)	179, 370, 1282, 1612, 1869
BsmAI	GTCTC	5 cut(s)	507, 786, 853, 1028, 1199
BsmBI	CGTCTC	1 cut(s)	507
BsmFI	GGGAC	2 cut(s)	1365, 2050
BsmI	GAATGC	4 cut(s)	583, 904, 1677, 1750
BsnI	GGCC	6 cut(s)	1029, 1154, 1248, 1444, 2072, 2169
Bso31I	GGTCTC	1 cut(s)	853
Bsp1286I	GDGCHC	3 cut(s)	1585, 1618, 2211
Bsp1407I	TGTACA	3 cut(s)	153, 1983, 2190
Bsp143I	GATC	4 cut(s)	246, 660, 754, 2121
Bsp19I	CCATGG	1 cut(s)	1672
BspACI	CCGC	6 cut(s)	377, 465, 1055, 1118, 1151, 2044
BspANI	GGCC	6 cut(s)	1029, 1154, 1248, 1444, 2072, 2169
BspCNI	CTCAG	6 cut(s)	214, 268, 424, 737, 900, 1501
BspDI	ATCGAT	2 cut(s)	663, 1308
BspHI	TCATGA	1 cut(s)	595
BspLI	GGNNCC	9 cut(s)	375, 561, 734, 892, 1168, 1582, 1617, 1712, 1802
BspMAI	CTGCAG	1 cut(s)	361
BspPI	GGATC	2 cut(s)	254, 668
BspT107I	GGYRCC	3 cut(s)	559, 1166, 1580
BspTNI	GGTCTC	1 cut(s)	853
BsrBI	CCGCTC	1 cut(s)	1151
BsrDI	GCAATG	2 cut(s)	937, 2006
BsrGI	TGTACA	3 cut(s)	153, 1983, 2190
BsrI	ACTGG	6 cut(s)	1030, 1131, 1393, 1619, 2080, 2132
BssECI	CCNNGG	5 cut(s)	804, 1672, 1692, 1923, 2073
BssMI	GATC	4 cut(s)	246, 660, 754, 2121
BssNI	GRCGYC	1 cut(s)	500
BssSI	CACGAG	1 cut(s)	1031
BssT1I	CCWWGG	3 cut(s)	1672, 1692, 2073
Bst2BI	CACGAG	1 cut(s)	1031
Bst4CI	ACNGT	4 cut(s)	400, 474, 959, 1990
Bst6I	CTCTTC	6 cut(s)	24, 66, 784, 1180, 1247, 2153
BstACI	GRCGYC	1 cut(s)	500
BstAPI	GCANNNNNTGC	2 cut(s)	977, 1745
BstAUI	TGTACA	3 cut(s)	153, 1983, 2190
BstC8I	GCNNGC	3 cut(s)	1102, 1667, 2221
BstDEI	CTNAG	7 cut(s)	222, 255, 432, 724, 908, 1509, 2026
BstDSI	CCRYGG	2 cut(s)	804, 1672
BstF5I	GGATG	9 cut(s)	168, 463, 824, 1021, 1051, 1178, 1370, 1933, 2177
BstHHI	GCGC	1 cut(s)	2157
BstKTI	GATC	4 cut(s)	249, 663, 757, 2124
BstMAI	GTCTC	5 cut(s)	507, 786, 853, 1028, 1199
BstMBI	GATC	4 cut(s)	246, 660, 754, 2121
BstMWI	GCNNNNNNNGC	8 cut(s)	566, 575, 899, 977, 1054, 1745, 1879, 2003
BstNSI	RCATGY	4 cut(s)	847, 967, 1519, 2223
BstSCI	CCNGG	1 cut(s)	331
BstSFI	CTRYAG	1 cut(s)	357
BstSLI	GKGCMC	1 cut(s)	1585
Bsu15I	ATCGAT	2 cut(s)	663, 1308
BsuI	GTATCC	2 cut(s)	516, 1283
BsuRI	GGCC	6 cut(s)	1029, 1154, 1248, 1444, 2072, 2169
BsuTUI	ATCGAT	2 cut(s)	663, 1308
BtgI	CCRYGG	2 cut(s)	804, 1672
BtsCI	GGATG	9 cut(s)	168, 463, 824, 1021, 1051, 1178, 1370, 1933, 2177
BtsI	GCAGTG	3 cut(s)	354, 902, 2164
BtsIMutI	CAGTG	6 cut(s)	354, 396, 902, 1986, 2139, 2164
Cac8I	GCNNGC	3 cut(s)	1102, 1667, 2221
CciI	TCATGA	1 cut(s)	595
CfoI	GCGC	1 cut(s)	2157
Cfr13I	GGNCC	3 cut(s)	611, 2077, 2167
ClaI	ATCGAT	2 cut(s)	663, 1308
CseI	GACGC	1 cut(s)	489
Csp6I	GTAC	7 cut(s)	48, 154, 967, 1257, 1840, 1984, 2191
CspCI	CAANNNNNGTGG	6 cut(s)	786, 821, 1484, 1519, 1796, 1831
CviQI	GTAC	7 cut(s)	48, 154, 967, 1257, 1840, 1984, 2191
DdeI	CTNAG	7 cut(s)	222, 255, 432, 724, 908, 1509, 2026
DpnI	GATC	4 cut(s)	248, 662, 756, 2123
DpnII	GATC	4 cut(s)	246, 660, 754, 2121
EaeI	YGGCCR	2 cut(s)	1027, 1246
Eam1104I	CTCTTC	6 cut(s)	24, 66, 784, 1180, 1247, 2153
EarI	CTCTTC	6 cut(s)	24, 66, 784, 1180, 1247, 2153
Eco130I	CCWWGG	3 cut(s)	1672, 1692, 2073
Eco147I	AGGCCT	2 cut(s)	1444, 2072
Eco24I	GRGCYC	1 cut(s)	1618
Eco31I	GGTCTC	1 cut(s)	853
Eco47I	GGWCC	2 cut(s)	611, 2077
EcoT14I	CCWWGG	3 cut(s)	1672, 1692, 2073
EcoT22I	ATGCAT	1 cut(s)	1750
EcoT38I	GRGCYC	1 cut(s)	1618
ErhI	CCWWGG	3 cut(s)	1672, 1692, 2073
Esp3I	CGTCTC	1 cut(s)	507
FalI	AAGNNNNNCTT	4 cut(s)	1559, 1591, 2085, 2117
FaqI	GGGAC	2 cut(s)	1365, 2050
FauI	CCCGC	1 cut(s)	2037
FbaI	TGATCA	2 cut(s)	754, 2121
FblI	GTMKAC	2 cut(s)	840, 1783
Fnu4HI	GCNGC	2 cut(s)	377, 1152
FokI	GGATG	9 cut(s)	155, 470, 831, 1028, 1038, 1185, 1377, 1940, 2164
FriOI	GRGCYC	1 cut(s)	1618
Fsp4HI	GCNGC	2 cut(s)	377, 1152
FspBI	CTAG	3 cut(s)	1475, 1715, 2239
FspI	TGCGCA	1 cut(s)	2156
GlaI	GCGC	1 cut(s)	2156
GluI	GCNGC	2 cut(s)	377, 1152
GsaI	CCCAGC	1 cut(s)	1134
GsuI	CTGGAG	4 cut(s)	201, 289, 909, 1602
HaeIII	GGCC	6 cut(s)	1029, 1154, 1248, 1444, 2072, 2169
HapII	CCGG	3 cut(s)	332, 563, 1170
HgaI	GACGC	1 cut(s)	489
HhaI	GCGC	1 cut(s)	2157
Hin1I	GRCGYC	1 cut(s)	500
Hin6I	GCGC	1 cut(s)	2155
HinP1I	GCGC	1 cut(s)	2155
HincII	GTYRAC	1 cut(s)	287
HindII	GTYRAC	1 cut(s)	287
HinfI	GANTC	6 cut(s)	303, 665, 706, 1289, 1785, 1830
HpaII	CCGG	3 cut(s)	332, 563, 1170
HphI	GGTGA	4 cut(s)	400, 1897, 1912, 2032
Hpy166II	GTNNAC	8 cut(s)	154, 287, 470, 477, 808, 841, 1784, 1986
Hpy188III	TCNNGA	7 cut(s)	172, 295, 511, 596, 614, 849, 1436
Hpy8I	GTNNAC	8 cut(s)	154, 287, 470, 477, 808, 841, 1784, 1986
Hpy99I	CGWCG	1 cut(s)	1830
HpyAV	CCTTC	8 cut(s)	4, 8, 17, 949, 1455, 1616, 1861, 2062
HpyCH4III	ACNGT	4 cut(s)	400, 474, 959, 1990
HpyCH4IV	ACGT	2 cut(s)	591, 2213
HpyF10VI	GCNNNNNNNGC	8 cut(s)	566, 575, 899, 977, 1054, 1745, 1879, 2003
HpyF3I	CTNAG	7 cut(s)	222, 255, 432, 724, 908, 1509, 2026
HpySE526I	ACGT	2 cut(s)	591, 2213
Hsp92I	GRCGYC	1 cut(s)	500
HspAI	GCGC	1 cut(s)	2155
Ksp22I	TGATCA	2 cut(s)	754, 2121
Kzo9I	GATC	4 cut(s)	246, 660, 754, 2121
LmnI	GCTCC	6 cut(s)	373, 890, 1148, 1468, 1621, 1674
LweI	GCATC	4 cut(s)	809, 973, 1355, 2217
MaeI	CTAG	3 cut(s)	1475, 1715, 2239
MaeII	ACGT	2 cut(s)	591, 2213
MaeIII	GTNAC	6 cut(s)	274, 959, 1108, 1220, 1384, 1918
MalI	GATC	4 cut(s)	248, 662, 756, 2123
MbiI	CCGCTC	1 cut(s)	1151
MboI	GATC	4 cut(s)	246, 660, 754, 2121
MfeI	CAATTG	2 cut(s)	765, 1874
MhlI	GDGCHC	3 cut(s)	1585, 1618, 2211
MlsI	TGGCCA	2 cut(s)	1029, 1248
MluCI	AATT	6 cut(s)	421, 765, 1280, 1763, 1874, 1961
MluNI	TGGCCA	2 cut(s)	1029, 1248
MlyI	GAGTC	2 cut(s)	297, 1779
MmeI	TCCRAC	2 cut(s)	1394, 1849
Mox20I	TGGCCA	2 cut(s)	1029, 1248
Mph1103I	ATGCAT	1 cut(s)	1750
MroXI	GAANNNNTTC	1 cut(s)	1834
MscI	TGGCCA	2 cut(s)	1029, 1248
MseI	TTAA	3 cut(s)	393, 738, 1934
MslI	CAYNNNNRTG	2 cut(s)	1578, 1991
Msp20I	TGGCCA	2 cut(s)	1029, 1248
MspI	CCGG	3 cut(s)	332, 563, 1170
MspR9I	CCNGG	1 cut(s)	333
MunI	CAATTG	2 cut(s)	765, 1874
Mva1269I	GAATGC	4 cut(s)	583, 904, 1677, 1750
MwoI	GCNNNNNNNGC	8 cut(s)	566, 575, 899, 977, 1054, 1745, 1879, 2003
NciI	CCSGG	1 cut(s)	333
NcoI	CCATGG	1 cut(s)	1672
NdeII	GATC	4 cut(s)	246, 660, 754, 2121
NlaIV	GGNNCC	9 cut(s)	375, 561, 734, 892, 1168, 1582, 1617, 1712, 1802
NmuCI	GTSAC	3 cut(s)	274, 959, 1918
NsbI	TGCGCA	1 cut(s)	2156
NsiI	ATGCAT	1 cut(s)	1750
NspI	RCATGY	4 cut(s)	847, 967, 1519, 2223
OliI	CACNNNNGTG	1 cut(s)	1578
PaeI	GCATGC	1 cut(s)	2223
PagI	TCATGA	1 cut(s)	595
PceI	AGGCCT	2 cut(s)	1444, 2072
PciI	ACATGT	2 cut(s)	843, 963
PctI	GAATGC	4 cut(s)	583, 904, 1677, 1750
PdmI	GAANNNNTTC	1 cut(s)	1834
PfeI	GAWTC	4 cut(s)	665, 706, 1289, 1830
PflMI	CCANNNNNTGG	1 cut(s)	1282
PkrI	GCNGC	2 cut(s)	378, 1153
PleI	GAGTC	2 cut(s)	297, 1779
PpsI	GAGTC	2 cut(s)	297, 1779
PscI	ACATGT	2 cut(s)	843, 963
PsiI	TTATAA	1 cut(s)	779
PspFI	CCCAGC	1 cut(s)	1130
PspN4I	GGNNCC	9 cut(s)	375, 561, 734, 892, 1168, 1582, 1617, 1712, 1802
PspPI	GGNCC	3 cut(s)	611, 2077, 2167
PstI	CTGCAG	1 cut(s)	361
RsaI	GTAC	7 cut(s)	49, 155, 968, 1258, 1841, 1985, 2192
RsaNI	GTAC	7 cut(s)	48, 154, 967, 1257, 1840, 1984, 2191
RseI	CAYNNNNRTG	2 cut(s)	1578, 1991
SaqAI	TTAA	3 cut(s)	393, 738, 1934
SatI	GCNGC	2 cut(s)	377, 1152
Sau3AI	GATC	4 cut(s)	246, 660, 754, 2121
Sau96I	GGNCC	3 cut(s)	611, 2077, 2167
ScaI	AGTACT	2 cut(s)	49, 1258
SchI	GAGTC	2 cut(s)	297, 1779
ScrFI	CCNGG	1 cut(s)	333
SduI	GDGCHC	3 cut(s)	1585, 1618, 2211
SfaNI	GCATC	4 cut(s)	809, 973, 1355, 2217
SfcI	CTRYAG	1 cut(s)	357
SinI	GGWCC	2 cut(s)	611, 2077
SmiMI	CAYNNNNRTG	2 cut(s)	1578, 1991
SmlI	CTYRAG	2 cut(s)	293, 1972
SmoI	CTYRAG	2 cut(s)	293, 1972
SphI	GCATGC	1 cut(s)	2223
Sse9I	AATT	6 cut(s)	421, 765, 1280, 1763, 1874, 1961
SseBI	AGGCCT	2 cut(s)	1444, 2072
SsiI	CCGC	6 cut(s)	377, 465, 1055, 1118, 1151, 2044
SspMI	CTAG	3 cut(s)	1475, 1715, 2239
StuI	AGGCCT	2 cut(s)	1444, 2072
StyD4I	CCNGG	1 cut(s)	331
StyI	CCWWGG	3 cut(s)	1672, 1692, 2073
TaaI	ACNGT	4 cut(s)	400, 474, 959, 1990
TaiI	ACGT	2 cut(s)	594, 2216
TaqI	TCGA	6 cut(s)	512, 663, 1183, 1308, 1374, 1857
TasI	AATT	6 cut(s)	421, 765, 1280, 1763, 1874, 1961
TatI	WGTACW	5 cut(s)	47, 153, 1256, 1983, 2190
TauI	GCSGC	2 cut(s)	379, 1154
TfiI	GAWTC	4 cut(s)	665, 706, 1289, 1830
Tru1I	TTAA	3 cut(s)	393, 738, 1934
Tru9I	TTAA	3 cut(s)	393, 738, 1934
TscAI	CASTG	6 cut(s)	361, 403, 909, 1993, 2139, 2164
TseFI	GTSAC	3 cut(s)	274, 959, 1918
Tsp45I	GTSAC	3 cut(s)	274, 959, 1918
TspRI	CASTG	6 cut(s)	361, 403, 909, 1993, 2139, 2164
Van91I	CCANNNNNTGG	1 cut(s)	1282
VpaK11BI	GGWCC	2 cut(s)	611, 2077
XapI	RAATTY	2 cut(s)	1763, 1961
XceI	RCATGY	4 cut(s)	847, 967, 1519, 2223
XmiI	GTMKAC	2 cut(s)	840, 1783
XmnI	GAANNNNTTC	1 cut(s)	1834
XspI	CTAG	3 cut(s)	1475, 1715, 2239
ZrmI	AGTACT	2 cut(s)	49, 1258
Zsp2I	ATGCAT	1 cut(s)	1750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.