Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Forward (+)

7061397 .. 7065844

Gene Structure 4448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00005220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGGAGAGGAAAGATATTTACCACTGTTTGAGACAACGAGAGCAAAGGGAAGAGTCCTATACAGGTTATTTGCAGTGTCTGTTTTTGTTGGTATATGTTTGATATGGGTATATAGACTGACTCACATACCGAAAGCTGGAGAAGATGGAAGATTTGGTTGGCTGTGTTTGTTCGCTGCTGAGTTATGGTTCAGCTTTTACTGGGTCGTCACACAAGCCACTCGGTGGAGCCGCATCTACAGACACACCTTCAAGGACAGGCTTTCTCAAAGATACGAGAAAGAATTGCCGGGGGTGGACATATTTGTGTGCACCGCGGATCCAATCATAGAGCCACCGATGATGGTGATGAACACCGTTTTGTCGGTCGTGGCTTACGACTACCCACCGGAGAAGCTCAGCGTGTATCTCTCCGATGATGGTGGCTCAGAACTAACATACTATGCTCTACTAGAAGCTGCTGAGTTTGCTAAGCACTGGATACCACATTGCAAGAAGTACAGTGTGGAACCAAGGTCGCCGGCTGCTTATTTCGTTTCAACAGCTTCTGATGTGGTTGGTGATCAAAGTCAGAATCAGAATCGAGCTGGTGATGTGGCTCTCATTAAGAAATTATACGAGAACATGGAGAATAAAATTGAAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTACGATCAAAACATAAAGGTTTTTCTCAGTGGAACTCATATTCATCAAAGCTAGACCATGATACCATTCTTCAAATAGTAGTTGATGGGAGAAACCCAAATGCAAGAGATGTTGAAGGGTGTATGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGTACCACCATAACTTCAAAGCTGGCGCTATGAATGCACTGATTAGGGTATCATCGAGCATTAGCAATGGGAAGTTACTTCTTAATGTAGATTGTGATATGTATTCGAACAACTCCATGGCCATAAGGGATGCACTTTGCTTCTTTATGGATGAAGAACAAGGCCATGAGATCGCATACGTACAGTTCCCACAGAATTTCGACAACCTTACTAAGAATGAATTATACGCTTCATTAAAAGTAATTAACGAGGTGGAAGCCCATGGTCTGGATAATTATTGGGGGACATTATATATTGGAAGTGGATGCTTTCACAGAAGAGAAGTTCTTTGTGGCAATATATTCAGCAAGGGTTGTAGGAGTGAAATGAAATGGGAGGGTAAAAAAGGAGAAGAACTTGCCATTCATGACTTGGAAGAAACTTCAAAGAGTCTTGCAAGTTGTGCATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGTTTGAAATATGGGTGTCCGGTTGAAGATGTGATAACGGGGTTATCGATCCAATGCAGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAAATGCAACCACATTGCTTCAGATACTTGTGCAGCATAAGAGATGGTCCGAAGGTAACCTCCAGATTATGCTTTCAAAGCACAGTGCTGTATGGTTTGGGCATGGAAAGATTAGTGTAGGCCATCAACTTGGATACCTTCGCTACAACTTATGGGCTGCTAACTGCTGGGCAACACTAATTTACTCGATTCTCCCTTCACTTTACCTCCTTAGAGGCATATCCTTATTTCCTCAGATTTCAAGCCGATGGATCATACCATTTGCATATGTTATAATCGCTAAGAACATTGGGAGCTTTCTGGAGTATATGTGGTGTGGAGGCACAACGTTAGGTTGGTGGAACGACCAACGTATATGGCTTTACCAGAGAATAACCTCATACCTATTTGCCTTCATCGACACCATTGTACACTACCTTGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGGCCGATGAAGATGTGTCCGAACGGTATAAGAAAGAGATCATGGAATTTGGCGGATCGTCTCCAATGTTTACCGTACTGGCAACACTAGCATTGCTCAACTTGTACTGCTTTGCCTGGTTTGTGCAGGCAGCAATCGCTGGAACAATTGGCGTTGCAGAAGTTTATGAGACAATGTGCTTGCAGATTCTTCTATGTGGGGTTTTGATTGTCATTAACCTACCGTTGTACGAAGCCCTATACCTAAGGAAGGACAAGGGGAAGCTGCCAAGCTCTGTAGCAGTGAAGTCAATGGCATTTGCTGGATTTGCTTGTATATGTTCTAAATTTATATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

740

Amino Acids

84.28

Weight (kDa)

7.47

Isoelectric Point (pI)

37.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	99 - 392	3.7e-90	Cellulose synthase
Cellulose_synt	PF03552	423 - 728	9.1e-41	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1703
AccB7I	CCANNNNNTGG	2 cut(s)	225, 1108
AccII	CGCG	1 cut(s)	317
AciI	CCGC	5 cut(s)	232, 315, 317, 661, 1938
AclI	AACGTT	1 cut(s)	1757
AclWI	GGATC	5 cut(s)	314, 327, 1363, 1688, 1948
AcoI	YGGCCR	2 cut(s)	960, 1887
AcsI	RAATTY	3 cut(s)	1036, 1931, 2210
AcuI	CTGAAG	1 cut(s)	1433
AdeI	CACNNNGTG	1 cut(s)	225
AfaI	GTAC	8 cut(s)	500, 678, 845, 1023, 1839, 1962, 1991, 2114
AfiI	CCNNNNNNNGG	4 cut(s)	137, 225, 1108, 2134
AjnI	CCWGG	1 cut(s)	2000
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	1 cut(s)	314
Alw26I	GTCTC	4 cut(s)	26, 829, 1950, 2048
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	5 cut(s)	314, 327, 1363, 1688, 1948
AlwNI	CAGNNNCTG	2 cut(s)	80, 548
Ama87I	CYCGRG	1 cut(s)	825
AoxI	GGCC	5 cut(s)	658, 960, 1003, 1549, 1887
ApaLI	GTGCAC	1 cut(s)	310
ApeKI	GCWGC	7 cut(s)	176, 458, 524, 1462, 1586, 2015, 2149
ApoI	RAATTY	3 cut(s)	1036, 1931, 2210
Asp700I	GAANNNNTTC	1 cut(s)	1418
AspLEI	GCGC	1 cut(s)	869
AspS9I	GGNCC	1 cut(s)	1476
AsuC2I	CCSGG	1 cut(s)	291
AsuHPI	GGTGA	3 cut(s)	358, 572, 602
AsuII	TTCGAA	1 cut(s)	947
AvaI	CYCGRG	1 cut(s)	825
AvaII	GGWCC	1 cut(s)	1476
AxyI	CCTNAGG	1 cut(s)	2129
BaeGI	GKGCMC	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	827, 860
BalI	TGGCCA	1 cut(s)	962
BamHI	GGATCC	1 cut(s)	319
Bbv12I	GWGCWC	1 cut(s)	314
BbvI	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
BccI	CCATC	9 cut(s)	140, 337, 413, 755, 1312, 1377, 1467, 1560, 1671
BciT130I	CCWGG	1 cut(s)	2002
BciVI	GTATCC	3 cut(s)	474, 1556, 1844
BclI	TGATCA	1 cut(s)	562
BcnI	CCSGG	1 cut(s)	291
BcoDI	GTCTC	4 cut(s)	26, 829, 1950, 2048
BfaI	CTAG	4 cut(s)	452, 656, 728, 1973
BfmI	CTRYAG	2 cut(s)	238, 2160
BfoI	RGCGCY	1 cut(s)	870
BfuI	GTATCC	3 cut(s)	474, 1556, 1844
BglI	GCCNNNNNGGC	1 cut(s)	1886
BisI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
BlpI	GCTNAGC	2 cut(s)	398, 471
BlsI	GCNGC	9 cut(s)	178, 233, 460, 526, 662, 1464, 1588, 2017, 2151
Bme1390I	CCNGG	2 cut(s)	291, 2002
Bme18I	GGWCC	1 cut(s)	1476
BmeT110I	CYCGRG	1 cut(s)	825
BmgT120I	GGNCC	1 cut(s)	1476
BmiI	GGNNCC	3 cut(s)	230, 321, 510
BmrFI	CCNGG	2 cut(s)	291, 2002
BmrI	ACTGGG	2 cut(s)	211, 835
BmsI	GCATC	3 cut(s)	243, 961, 1136
BmuI	ACTGGG	2 cut(s)	211, 835
BpmI	CTGGAG	3 cut(s)	159, 1475, 1751
Bpu1102I	GCTNAGC	2 cut(s)	398, 471
Bpu14I	TTCGAA	1 cut(s)	947
BpuMI	CCSGG	1 cut(s)	291
Bsa29I	ATCGAT	1 cut(s)	1367
BsaAI	YACGTR	1 cut(s)	1021
BsaBI	GATNNNNATC	1 cut(s)	1387
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1846, 1881
BsaWI	WCCGGW	2 cut(s)	388, 1339
BsaXI	ACNNNNNCTCC	4 cut(s)	1620, 1650, 1724, 1754
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 225, 1108, 2134
Bse118I	RCCGGY	1 cut(s)	520
Bse1I	ACTGG	4 cut(s)	206, 482, 841, 1968
Bse21I	CCTNAGG	1 cut(s)	2129
Bse3DI	GCAATG	4 cut(s)	487, 913, 1442, 1976
Bse8I	GATNNNNATC	1 cut(s)	1387
BseBI	CCWGG	1 cut(s)	2002
BseCI	ATCGAT	1 cut(s)	1367
BseDI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1846, 1881
BseGI	GGATG	4 cut(s)	976, 997, 1151, 1388
BseJI	GATNNNNATC	1 cut(s)	1387
BseLI	CCNNNNNNNGG	4 cut(s)	137, 225, 1108, 2134
BseMI	GCAATG	4 cut(s)	487, 913, 1442, 1976
BseMII	CTCAG	6 cut(s)	171, 412, 441, 453, 716, 1676
BseNI	ACTGG	4 cut(s)	206, 482, 841, 1968
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
BseYI	CCCAGC	1 cut(s)	1596
BsgI	GTGCAG	2 cut(s)	1481, 2030
Bsh1236I	CGCG	1 cut(s)	317
Bsh1285I	CGRYCG	1 cut(s)	369
BshFI	GGCC	5 cut(s)	660, 962, 1005, 1551, 1889
BshVI	ATCGAT	1 cut(s)	1367
BsiEI	CGRYCG	1 cut(s)	369
BsiHKAI	GWGCWC	1 cut(s)	314
BsiHKCI	CYCGRG	1 cut(s)	825
BsiSI	CCGG	4 cut(s)	290, 389, 521, 1340
BslFI	GGGAC	1 cut(s)	1138
BslI	CCNNNNNNNGG	4 cut(s)	137, 225, 1108, 2134
BsmAI	GTCTC	4 cut(s)	26, 829, 1950, 2048
BsmBI	CGTCTC	1 cut(s)	1950
BsmFI	GGGAC	1 cut(s)	1138
BsmI	GAATGC	1 cut(s)	880
BsnI	GGCC	5 cut(s)	660, 962, 1005, 1551, 1889
Bso31I	GGTCTC	1 cut(s)	829
BsoBI	CYCGRG	1 cut(s)	825
Bsp119I	TTCGAA	1 cut(s)	947
Bsp1286I	GDGCHC	1 cut(s)	314
Bsp1407I	TGTACA	1 cut(s)	1837
Bsp143I	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
Bsp1720I	GCTNAGC	2 cut(s)	398, 471
Bsp19I	CCATGG	2 cut(s)	957, 1102
BspACI	CCGC	5 cut(s)	232, 315, 317, 661, 1938
BspANI	GGCC	5 cut(s)	660, 962, 1005, 1551, 1889
BspCNI	CTCAG	6 cut(s)	172, 411, 440, 454, 715, 1675
BspDI	ATCGAT	1 cut(s)	1367
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	3 cut(s)	230, 321, 510
BspPI	GGATC	5 cut(s)	314, 327, 1363, 1688, 1948
BspT104I	TTCGAA	1 cut(s)	947
BspTNI	GGTCTC	1 cut(s)	829
BsrDI	GCAATG	4 cut(s)	487, 913, 1442, 1976
BsrFI	RCCGGY	1 cut(s)	520
BsrGI	TGTACA	1 cut(s)	1837
BsrI	ACTGG	4 cut(s)	206, 482, 841, 1968
BssAI	RCCGGY	1 cut(s)	520
BssECI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1846, 1881
BssMI	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
BssT1I	CCWWGG	5 cut(s)	512, 957, 1102, 1846, 1881
Bst2UI	CCWGG	1 cut(s)	2002
Bst4CI	ACNGT	8 cut(s)	27, 358, 503, 1026, 1514, 1911, 1960, 2109
Bst6I	CTCTTC	4 cut(s)	46, 827, 1153, 1287
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstAUI	TGTACA	1 cut(s)	1837
BstBAI	YACGTR	1 cut(s)	1021
BstBI	TTCGAA	1 cut(s)	947
BstC8I	GCNNGC	4 cut(s)	522, 865, 2013, 2066
BstDSI	CCRYGG	3 cut(s)	315, 957, 1102
BstEII	GGTNACC	1 cut(s)	1484
BstENI	CCTNNNNNAGG	1 cut(s)	2132
BstF5I	GGATG	4 cut(s)	976, 997, 1151, 1388
BstFNI	CGCG	1 cut(s)	317
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	1 cut(s)	869
BstKTI	GATC	8 cut(s)	322, 565, 683, 1014, 1371, 1683, 1926, 1943
BstMAI	GTCTC	4 cut(s)	26, 829, 1950, 2048
BstMBI	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
BstMCI	CGRYCG	1 cut(s)	369
BstMWI	GCNNNNNNNGC	8 cut(s)	467, 875, 1283, 1507, 1886, 1973, 2021, 2192
BstNI	CCWGG	1 cut(s)	2002
BstPI	GGTNACC	1 cut(s)	1484
BstSCI	CCNGG	2 cut(s)	289, 2000
BstSFI	CTRYAG	2 cut(s)	238, 2160
BstSLI	GKGCMC	1 cut(s)	314
BstSNI	TACGTA	1 cut(s)	1021
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	1 cut(s)	1559
BstYI	RGATCY	1 cut(s)	319
Bsu15I	ATCGAT	1 cut(s)	1367
Bsu36I	CCTNAGG	1 cut(s)	2129
BsuI	GTATCC	3 cut(s)	474, 1556, 1844
BsuRI	GGCC	5 cut(s)	660, 962, 1005, 1551, 1889
BsuTUI	ATCGAT	1 cut(s)	1367
BtgI	CCRYGG	3 cut(s)	315, 957, 1102
BtsCI	GGATG	4 cut(s)	976, 997, 1151, 1388
BtsI	GCAGTG	3 cut(s)	81, 654, 2172
Cac8I	GCNNGC	4 cut(s)	522, 865, 2013, 2066
CaiI	CAGNNNCTG	2 cut(s)	80, 548
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	1 cut(s)	869
Cfr10I	RCCGGY	1 cut(s)	520
Cfr13I	GGNCC	1 cut(s)	1476
Cfr42I	CCGCGG	1 cut(s)	318
ClaI	ATCGAT	1 cut(s)	1367
Csp6I	GTAC	8 cut(s)	499, 677, 844, 1022, 1838, 1961, 1990, 2113
CviAII	CATG	8 cut(s)	625, 734, 958, 1007, 1103, 1247, 1532, 1927
CviQI	GTAC	8 cut(s)	499, 677, 844, 1022, 1838, 1961, 1990, 2113
DpnI	GATC	8 cut(s)	321, 564, 682, 1013, 1370, 1682, 1925, 1942
DpnII	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
DraIII	CACNNNGTG	1 cut(s)	225
EaeI	YGGCCR	2 cut(s)	960, 1887
Eam1104I	CTCTTC	4 cut(s)	46, 827, 1153, 1287
EarI	CTCTTC	4 cut(s)	46, 827, 1153, 1287
EciI	GGCGGA	1 cut(s)	1953
Eco105I	TACGTA	1 cut(s)	1021
Eco130I	CCWWGG	5 cut(s)	512, 957, 1102, 1846, 1881
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	1 cut(s)	1476
Eco57I	CTGAAG	1 cut(s)	1433
Eco81I	CCTNAGG	1 cut(s)	2129
Eco88I	CYCGRG	1 cut(s)	825
Eco91I	GGTNACC	1 cut(s)	1484
EcoNI	CCTNNNNNAGG	1 cut(s)	2132
EcoO65I	GGTNACC	1 cut(s)	1484
EcoRII	CCWGG	1 cut(s)	2000
EcoT14I	CCWWGG	5 cut(s)	512, 957, 1102, 1846, 1881
ErhI	CCWWGG	5 cut(s)	512, 957, 1102, 1846, 1881
Esp3I	CGTCTC	1 cut(s)	1950
FaeI	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1930
FalI	AAGNNNNNCTT	2 cut(s)	1402, 1434
FaqI	GGGAC	1 cut(s)	1138
FatI	CATG	8 cut(s)	624, 733, 957, 1006, 1102, 1246, 1531, 1926
FauNDI	CATATG	1 cut(s)	1696
FbaI	TGATCA	1 cut(s)	562
Fnu4HI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
FokI	GGATG	4 cut(s)	983, 1004, 1158, 1395
Fsp4HI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
FspBI	CTAG	4 cut(s)	452, 656, 728, 1973
GlaI	GCGC	1 cut(s)	868
GluI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
GsaI	CCCAGC	1 cut(s)	1600
GsuI	CTGGAG	3 cut(s)	159, 1475, 1751
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	5 cut(s)	660, 962, 1005, 1551, 1889
HapII	CCGG	4 cut(s)	290, 389, 521, 1340
HhaI	GCGC	1 cut(s)	869
Hin1II	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1930
Hin6I	GCGC	1 cut(s)	867
HinP1I	GCGC	1 cut(s)	867
HindIII	AAGCTT	1 cut(s)	1416
HinfI	GANTC	8 cut(s)	54, 121, 574, 580, 1270, 1618, 1859, 2071
HpaII	CCGG	4 cut(s)	290, 389, 521, 1340
HphI	GGTGA	3 cut(s)	358, 572, 602
Hpy166II	GTNNAC	4 cut(s)	298, 312, 1840, 1956
Hpy188III	TCNNGA	5 cut(s)	827, 1109, 1247, 1492, 1730
Hpy8I	GTNNAC	4 cut(s)	298, 312, 1840, 1956
HpyAV	CCTTC	7 cut(s)	259, 785, 1475, 1577, 1635, 1831, 2128
HpyCH4III	ACNGT	8 cut(s)	27, 358, 503, 1026, 1514, 1911, 1960, 2109
HpyCH4IV	ACGT	3 cut(s)	1020, 1757, 1780
HpyF10VI	GCNNNNNNNGC	8 cut(s)	467, 875, 1283, 1507, 1886, 1973, 2021, 2192
HpySE526I	ACGT	3 cut(s)	1020, 1757, 1780
Hsp92II	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1930
HspAI	GCGC	1 cut(s)	867
KroI	GCCGGC	1 cut(s)	520
KroNI	GCCGGC	1 cut(s)	522
Ksp22I	TGATCA	1 cut(s)	562
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
LmnI	GCTCC	2 cut(s)	228, 1722
Lsp1109I	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
LweI	GCATC	3 cut(s)	243, 961, 1136
MaeI	CTAG	4 cut(s)	452, 656, 728, 1973
MaeII	ACGT	3 cut(s)	1020, 1757, 1780
MaeIII	GTNAC	3 cut(s)	208, 915, 1484
MalI	GATC	8 cut(s)	321, 564, 682, 1013, 1370, 1682, 1925, 1942
MboI	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
MfeI	CAATTG	1 cut(s)	2031
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	1 cut(s)	314
MlsI	TGGCCA	1 cut(s)	962
MluNI	TGGCCA	1 cut(s)	962
MlyI	GAGTC	3 cut(s)	63, 115, 1279
MmeI	TCCRAC	1 cut(s)	1430
MnlI	CCTC	9 cut(s)	1084, 1210, 1373, 1499, 1637, 1646, 1671, 1742, 1816
Mox20I	TGGCCA	1 cut(s)	962
MroNI	GCCGGC	1 cut(s)	520
MroXI	GAANNNNTTC	1 cut(s)	1418
MscI	TGGCCA	1 cut(s)	962
MseI	TTAA	6 cut(s)	606, 924, 1076, 1086, 1430, 2100
MslI	CAYNNNNRTG	1 cut(s)	305
Msp20I	TGGCCA	1 cut(s)	962
MspA1I	CMGCKG	1 cut(s)	317
MspI	CCGG	4 cut(s)	290, 389, 521, 1340
MspR9I	CCNGG	2 cut(s)	291, 2002
MunI	CAATTG	1 cut(s)	2031
Mva1269I	GAATGC	1 cut(s)	880
MvaI	CCWGG	1 cut(s)	2002
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	8 cut(s)	467, 875, 1283, 1507, 1886, 1973, 2021, 2192
NaeI	GCCGGC	1 cut(s)	522
NciI	CCSGG	1 cut(s)	291
NcoI	CCATGG	2 cut(s)	957, 1102
NdeI	CATATG	1 cut(s)	1696
NdeII	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
NgoMIV	GCCGGC	1 cut(s)	520
NlaIII	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1930
NlaIV	GGNNCC	3 cut(s)	230, 321, 510
NmuCI	GTSAC	1 cut(s)	208
NspV	TTCGAA	1 cut(s)	947
PagI	TCATGA	1 cut(s)	1246
PcsI	WCGNNNNNNNCGW	2 cut(s)	375, 1364
PctI	GAATGC	1 cut(s)	880
PdiI	GCCGGC	1 cut(s)	522
PdmI	GAANNNNTTC	1 cut(s)	1418
PfeI	GAWTC	5 cut(s)	574, 580, 1618, 1859, 2071
PflMI	CCANNNNNTGG	2 cut(s)	225, 1108
PkrI	GCNGC	9 cut(s)	178, 233, 460, 526, 662, 1464, 1588, 2017, 2151
PleI	GAGTC	3 cut(s)	62, 115, 1278
PpsI	GAGTC	3 cut(s)	62, 115, 1278
Ppu21I	YACGTR	1 cut(s)	1021
PsiI	TTATAA	1 cut(s)	1703
Psp1406I	AACGTT	1 cut(s)	1757
Psp6I	CCWGG	1 cut(s)	2000
PspEI	GGTNACC	1 cut(s)	1484
PspFI	CCCAGC	1 cut(s)	1596
PspGI	CCWGG	1 cut(s)	2000
PspN4I	GGNNCC	3 cut(s)	230, 321, 510
PspPI	GGNCC	1 cut(s)	1476
PstNI	CAGNNNCTG	2 cut(s)	80, 548
PsuI	RGATCY	1 cut(s)	319
RsaI	GTAC	8 cut(s)	500, 678, 845, 1023, 1839, 1962, 1991, 2114
RsaNI	GTAC	8 cut(s)	499, 677, 844, 1022, 1838, 1961, 1990, 2113
RseI	CAYNNNNRTG	1 cut(s)	305
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	6 cut(s)	606, 924, 1076, 1086, 1430, 2100
SatI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
Sau3AI	GATC	8 cut(s)	319, 562, 680, 1011, 1368, 1680, 1923, 1940
Sau96I	GGNCC	1 cut(s)	1476
SchI	GAGTC	3 cut(s)	63, 115, 1279
ScrFI	CCNGG	2 cut(s)	291, 2002
SduI	GDGCHC	1 cut(s)	314
SfaNI	GCATC	3 cut(s)	243, 961, 1136
SfcI	CTRYAG	2 cut(s)	238, 2160
Sfr303I	CCGCGG	1 cut(s)	318
SfuI	TTCGAA	1 cut(s)	947
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	1 cut(s)	1476
SmiMI	CAYNNNNRTG	1 cut(s)	305
SnaBI	TACGTA	1 cut(s)	1021
SsiI	CCGC	5 cut(s)	232, 315, 317, 661, 1938
SspMI	CTAG	4 cut(s)	452, 656, 728, 1973
StyD4I	CCNGG	2 cut(s)	289, 2000
StyI	CCWWGG	5 cut(s)	512, 957, 1102, 1846, 1881
TaaI	ACNGT	8 cut(s)	27, 358, 503, 1026, 1514, 1911, 1960, 2109
TaiI	ACGT	3 cut(s)	1023, 1760, 1783
TaqI	TCGA	7 cut(s)	583, 896, 947, 1041, 1367, 1616, 1827
TaqII	GACCGA	1 cut(s)	355
TatI	WGTACW	3 cut(s)	498, 1837, 1989
TauI	GCSGC	2 cut(s)	234, 663
TfiI	GAWTC	5 cut(s)	574, 580, 1618, 1859, 2071
Tru1I	TTAA	6 cut(s)	606, 924, 1076, 1086, 1430, 2100
Tru9I	TTAA	6 cut(s)	606, 924, 1076, 1086, 1430, 2100
TseFI	GTSAC	1 cut(s)	208
TseI	GCWGC	7 cut(s)	176, 458, 524, 1462, 1586, 2015, 2149
Tsp45I	GTSAC	1 cut(s)	208
Van91I	CCANNNNNTGG	2 cut(s)	225, 1108
VneI	GTGCAC	1 cut(s)	310
VpaK11BI	GGWCC	1 cut(s)	1476
XagI	CCTNNNNNAGG	1 cut(s)	2132
XapI	RAATTY	3 cut(s)	1036, 1931, 2210
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1249
XmnI	GAANNNNTTC	1 cut(s)	1418
XspI	CTAG	4 cut(s)	452, 656, 728, 1973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.